[ { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR499ASS/preprocessing/bigWigs/ENCSR499ASS.bigWig", "name": "ENCSR499ASS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR499ASS" ], "assay": "ATAC", "biosample summary": "Homo sapiens PC-3", "biosample term name": "PC-3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR499ASS/chrombpnet_model_feb15_fold_1/ENCSR499ASS_w_bias.bw", "name": "ENCSR499ASS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR499ASS" ], "assay": "ATAC", "biosample summary": "Homo sapiens PC-3", "biosample term name": "PC-3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR499ASS/chrombpnet_model_feb15_fold_1/ENCSR499ASS_wo_bias.bw", "name": "ENCSR499ASS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR499ASS" ], "assay": "ATAC", "biosample summary": "Homo sapiens PC-3", "biosample term name": "PC-3", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR499ASS/chrombpnet_model_feb15_fold_1/full_ENCSR499ASS.counts.bigwig", "name": "ENCSR499ASS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR499ASS" ], "assay": "ATAC", "biosample summary": "Homo sapiens PC-3", "biosample term name": "PC-3", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR499ASS/chrombpnet_model_feb15_fold_1/full_ENCSR499ASS.profile.bigwig", "name": "ENCSR499ASS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR499ASS" ], "assay": "ATAC", "biosample summary": "Homo sapiens PC-3", "biosample term name": "PC-3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR182EZJ/preprocessing/bigWigs/ENCSR182EZJ.bigWig", "name": "ENCSR182EZJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR182EZJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR182EZJ/chrombpnet_model_feb15_fold_1/ENCSR182EZJ_w_bias.bw", "name": "ENCSR182EZJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR182EZJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR182EZJ/chrombpnet_model_feb15_fold_1/ENCSR182EZJ_wo_bias.bw", "name": "ENCSR182EZJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR182EZJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR182EZJ/chrombpnet_model_feb15_fold_1/full_ENCSR182EZJ.counts.bigwig", "name": "ENCSR182EZJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR182EZJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR182EZJ/chrombpnet_model_feb15_fold_1/full_ENCSR182EZJ.profile.bigwig", "name": "ENCSR182EZJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR182EZJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR868FGK/preprocessing/bigWigs/ENCSR868FGK.bigWig", "name": "ENCSR868FGK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR868FGK" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR868FGK/chrombpnet_model_feb15_fold_1/ENCSR868FGK_w_bias.bw", "name": "ENCSR868FGK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR868FGK" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR868FGK/chrombpnet_model_feb15_fold_1/ENCSR868FGK_wo_bias.bw", "name": "ENCSR868FGK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR868FGK" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR868FGK/chrombpnet_model_feb15_fold_1/full_ENCSR868FGK.counts.bigwig", "name": "ENCSR868FGK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR868FGK" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR868FGK/chrombpnet_model_feb15_fold_1/full_ENCSR868FGK.profile.bigwig", "name": "ENCSR868FGK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR868FGK" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR587TRP/preprocessing/bigWigs/ENCSR587TRP.bigWig", "name": "ENCSR587TRP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR587TRP" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR587TRP/chrombpnet_model_feb15_fold_1/ENCSR587TRP_w_bias.bw", "name": "ENCSR587TRP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR587TRP" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR587TRP/chrombpnet_model_feb15_fold_1/ENCSR587TRP_wo_bias.bw", "name": "ENCSR587TRP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR587TRP" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR587TRP/chrombpnet_model_feb15_fold_1/full_ENCSR587TRP.counts.bigwig", "name": "ENCSR587TRP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR587TRP" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR587TRP/chrombpnet_model_feb15_fold_1/full_ENCSR587TRP.profile.bigwig", "name": "ENCSR587TRP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR587TRP" ], "assay": "ATAC", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR637XSC/preprocessing/bigWigs/ENCSR637XSC.bigWig", "name": "ENCSR637XSC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR637XSC" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637XSC/chrombpnet_model_feb15_fold_1/ENCSR637XSC_w_bias.bw", "name": "ENCSR637XSC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR637XSC" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637XSC/chrombpnet_model_feb15_fold_1/ENCSR637XSC_wo_bias.bw", "name": "ENCSR637XSC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR637XSC" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637XSC/chrombpnet_model_feb15_fold_1/full_ENCSR637XSC.counts.bigwig", "name": "ENCSR637XSC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR637XSC" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637XSC/chrombpnet_model_feb15_fold_1/full_ENCSR637XSC.profile.bigwig", "name": "ENCSR637XSC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR637XSC" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR200OML/preprocessing/bigWigs/ENCSR200OML.bigWig", "name": "ENCSR200OML observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR200OML" ], "assay": "ATAC", "biosample summary": "Homo sapiens IMR-90 nuclear fraction and unspecified fraction", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR200OML/chrombpnet_model_feb15_fold_1/ENCSR200OML_w_bias.bw", "name": "ENCSR200OML ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR200OML" ], "assay": "ATAC", "biosample summary": "Homo sapiens IMR-90 nuclear fraction and unspecified fraction", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR200OML/chrombpnet_model_feb15_fold_1/ENCSR200OML_wo_bias.bw", "name": "ENCSR200OML ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR200OML" ], "assay": "ATAC", "biosample summary": "Homo sapiens IMR-90 nuclear fraction and unspecified fraction", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR200OML/chrombpnet_model_feb15_fold_1/full_ENCSR200OML.counts.bigwig", "name": "ENCSR200OML ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR200OML" ], "assay": "ATAC", "biosample summary": "Homo sapiens IMR-90 nuclear fraction and unspecified fraction", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR200OML/chrombpnet_model_feb15_fold_1/full_ENCSR200OML.profile.bigwig", "name": "ENCSR200OML ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR200OML" ], "assay": "ATAC", "biosample summary": "Homo sapiens IMR-90 nuclear fraction and unspecified fraction", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR541KFY/preprocessing/bigWigs/ENCSR541KFY.bigWig", "name": "ENCSR541KFY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR541KFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR541KFY/chrombpnet_model_feb15_fold_1/ENCSR541KFY_w_bias.bw", "name": "ENCSR541KFY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541KFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR541KFY/chrombpnet_model_feb15_fold_1/ENCSR541KFY_wo_bias.bw", "name": "ENCSR541KFY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541KFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR541KFY/chrombpnet_model_feb15_fold_1/full_ENCSR541KFY.counts.bigwig", "name": "ENCSR541KFY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541KFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR541KFY/chrombpnet_model_feb15_fold_1/full_ENCSR541KFY.profile.bigwig", "name": "ENCSR541KFY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541KFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR080SNF/preprocessing/bigWigs/ENCSR080SNF.bigWig", "name": "ENCSR080SNF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR080SNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR080SNF/chrombpnet_model_feb15_fold_1/ENCSR080SNF_w_bias.bw", "name": "ENCSR080SNF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR080SNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR080SNF/chrombpnet_model_feb15_fold_1/ENCSR080SNF_wo_bias.bw", "name": "ENCSR080SNF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR080SNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR080SNF/chrombpnet_model_feb15_fold_1/full_ENCSR080SNF.counts.bigwig", "name": "ENCSR080SNF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR080SNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR080SNF/chrombpnet_model_feb15_fold_1/full_ENCSR080SNF.profile.bigwig", "name": "ENCSR080SNF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR080SNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR422SUG/preprocessing/bigWigs/ENCSR422SUG.bigWig", "name": "ENCSR422SUG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR422SUG" ], "assay": "ATAC", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422SUG/chrombpnet_model_feb15_fold_1/ENCSR422SUG_w_bias.bw", "name": "ENCSR422SUG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR422SUG" ], "assay": "ATAC", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422SUG/chrombpnet_model_feb15_fold_1/ENCSR422SUG_wo_bias.bw", "name": "ENCSR422SUG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR422SUG" ], "assay": "ATAC", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422SUG/chrombpnet_model_feb15_fold_1/full_ENCSR422SUG.counts.bigwig", "name": "ENCSR422SUG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR422SUG" ], "assay": "ATAC", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422SUG/chrombpnet_model_feb15_fold_1/full_ENCSR422SUG.profile.bigwig", "name": "ENCSR422SUG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR422SUG" ], "assay": "ATAC", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR712ZRY/preprocessing/bigWigs/ENCSR712ZRY.bigWig", "name": "ENCSR712ZRY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR712ZRY" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19463", "biosample term name": "GM19463", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR712ZRY/chrombpnet_model_feb15_fold_1/ENCSR712ZRY_w_bias.bw", "name": "ENCSR712ZRY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR712ZRY" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19463", "biosample term name": "GM19463", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR712ZRY/chrombpnet_model_feb15_fold_1/ENCSR712ZRY_wo_bias.bw", "name": "ENCSR712ZRY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR712ZRY" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19463", "biosample term name": "GM19463", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR712ZRY/chrombpnet_model_feb15_fold_1/full_ENCSR712ZRY.counts.bigwig", "name": "ENCSR712ZRY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR712ZRY" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19463", "biosample term name": "GM19463", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR712ZRY/chrombpnet_model_feb15_fold_1/full_ENCSR712ZRY.profile.bigwig", "name": "ENCSR712ZRY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR712ZRY" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19463", "biosample term name": "GM19463", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR704VZY/preprocessing/bigWigs/ENCSR704VZY.bigWig", "name": "ENCSR704VZY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR704VZY" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR704VZY/chrombpnet_model_feb15_fold_1/ENCSR704VZY_w_bias.bw", "name": "ENCSR704VZY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR704VZY" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR704VZY/chrombpnet_model_feb15_fold_1/ENCSR704VZY_wo_bias.bw", "name": "ENCSR704VZY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR704VZY" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR704VZY/chrombpnet_model_feb15_fold_1/full_ENCSR704VZY.counts.bigwig", "name": "ENCSR704VZY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR704VZY" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR704VZY/chrombpnet_model_feb15_fold_1/full_ENCSR704VZY.profile.bigwig", "name": "ENCSR704VZY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR704VZY" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR812ZKP/preprocessing/bigWigs/ENCSR812ZKP.bigWig", "name": "ENCSR812ZKP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR812ZKP" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR812ZKP/chrombpnet_model_feb15_fold_1/ENCSR812ZKP_w_bias.bw", "name": "ENCSR812ZKP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR812ZKP" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR812ZKP/chrombpnet_model_feb15_fold_1/ENCSR812ZKP_wo_bias.bw", "name": "ENCSR812ZKP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR812ZKP" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR812ZKP/chrombpnet_model_feb15_fold_1/full_ENCSR812ZKP.counts.bigwig", "name": "ENCSR812ZKP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR812ZKP" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR812ZKP/chrombpnet_model_feb15_fold_1/full_ENCSR812ZKP.profile.bigwig", "name": "ENCSR812ZKP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR812ZKP" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR555ZDH/preprocessing/bigWigs/ENCSR555ZDH.bigWig", "name": "ENCSR555ZDH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR555ZDH" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR555ZDH/chrombpnet_model_feb15_fold_1/ENCSR555ZDH_w_bias.bw", "name": "ENCSR555ZDH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR555ZDH" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR555ZDH/chrombpnet_model_feb15_fold_1/ENCSR555ZDH_wo_bias.bw", "name": "ENCSR555ZDH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR555ZDH" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR555ZDH/chrombpnet_model_feb15_fold_1/full_ENCSR555ZDH.counts.bigwig", "name": "ENCSR555ZDH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR555ZDH" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR555ZDH/chrombpnet_model_feb15_fold_1/full_ENCSR555ZDH.profile.bigwig", "name": "ENCSR555ZDH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR555ZDH" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR241OBO/preprocessing/bigWigs/ENCSR241OBO.bigWig", "name": "ENCSR241OBO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR241OBO" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (59 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR241OBO/chrombpnet_model_feb15_fold_1/ENCSR241OBO_w_bias.bw", "name": "ENCSR241OBO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR241OBO" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (59 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR241OBO/chrombpnet_model_feb15_fold_1/ENCSR241OBO_wo_bias.bw", "name": "ENCSR241OBO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR241OBO" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (59 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR241OBO/chrombpnet_model_feb15_fold_1/full_ENCSR241OBO.counts.bigwig", "name": "ENCSR241OBO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR241OBO" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (59 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR241OBO/chrombpnet_model_feb15_fold_1/full_ENCSR241OBO.profile.bigwig", "name": "ENCSR241OBO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR241OBO" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (59 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR553LAZ/preprocessing/bigWigs/ENCSR553LAZ.bigWig", "name": "ENCSR553LAZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR553LAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR553LAZ/chrombpnet_model_feb15_fold_1/ENCSR553LAZ_w_bias.bw", "name": "ENCSR553LAZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR553LAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR553LAZ/chrombpnet_model_feb15_fold_1/ENCSR553LAZ_wo_bias.bw", "name": "ENCSR553LAZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR553LAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR553LAZ/chrombpnet_model_feb15_fold_1/full_ENCSR553LAZ.counts.bigwig", "name": "ENCSR553LAZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR553LAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR553LAZ/chrombpnet_model_feb15_fold_1/full_ENCSR553LAZ.profile.bigwig", "name": "ENCSR553LAZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR553LAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR530XBF/preprocessing/bigWigs/ENCSR530XBF.bigWig", "name": "ENCSR530XBF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR530XBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR530XBF/chrombpnet_model_feb15_fold_1/ENCSR530XBF_w_bias.bw", "name": "ENCSR530XBF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR530XBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR530XBF/chrombpnet_model_feb15_fold_1/ENCSR530XBF_wo_bias.bw", "name": "ENCSR530XBF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR530XBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR530XBF/chrombpnet_model_feb15_fold_1/full_ENCSR530XBF.counts.bigwig", "name": "ENCSR530XBF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR530XBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR530XBF/chrombpnet_model_feb15_fold_1/full_ENCSR530XBF.profile.bigwig", "name": "ENCSR530XBF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR530XBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR496PPU/preprocessing/bigWigs/ENCSR496PPU.bigWig", "name": "ENCSR496PPU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR496PPU" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR496PPU/chrombpnet_model_feb15_fold_1/ENCSR496PPU_w_bias.bw", "name": "ENCSR496PPU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496PPU" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR496PPU/chrombpnet_model_feb15_fold_1/ENCSR496PPU_wo_bias.bw", "name": "ENCSR496PPU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496PPU" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR496PPU/chrombpnet_model_feb15_fold_1/full_ENCSR496PPU.counts.bigwig", "name": "ENCSR496PPU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496PPU" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR496PPU/chrombpnet_model_feb15_fold_1/full_ENCSR496PPU.profile.bigwig", "name": "ENCSR496PPU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496PPU" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR952SPO/preprocessing/bigWigs/ENCSR952SPO.bigWig", "name": "ENCSR952SPO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR952SPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR952SPO/chrombpnet_model_feb15_fold_1/ENCSR952SPO_w_bias.bw", "name": "ENCSR952SPO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR952SPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR952SPO/chrombpnet_model_feb15_fold_1/ENCSR952SPO_wo_bias.bw", "name": "ENCSR952SPO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR952SPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR952SPO/chrombpnet_model_feb15_fold_1/full_ENCSR952SPO.counts.bigwig", "name": "ENCSR952SPO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR952SPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR952SPO/chrombpnet_model_feb15_fold_1/full_ENCSR952SPO.profile.bigwig", "name": "ENCSR952SPO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR952SPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR491VXJ/preprocessing/bigWigs/ENCSR491VXJ.bigWig", "name": "ENCSR491VXJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR491VXJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR491VXJ/chrombpnet_model_feb15_fold_1/ENCSR491VXJ_w_bias.bw", "name": "ENCSR491VXJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR491VXJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR491VXJ/chrombpnet_model_feb15_fold_1/ENCSR491VXJ_wo_bias.bw", "name": "ENCSR491VXJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR491VXJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR491VXJ/chrombpnet_model_feb15_fold_1/full_ENCSR491VXJ.counts.bigwig", "name": "ENCSR491VXJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR491VXJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR491VXJ/chrombpnet_model_feb15_fold_1/full_ENCSR491VXJ.profile.bigwig", "name": "ENCSR491VXJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR491VXJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR310UDW/preprocessing/bigWigs/ENCSR310UDW.bigWig", "name": "ENCSR310UDW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR310UDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (40 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310UDW/chrombpnet_model_feb15_fold_1/ENCSR310UDW_w_bias.bw", "name": "ENCSR310UDW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR310UDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (40 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310UDW/chrombpnet_model_feb15_fold_1/ENCSR310UDW_wo_bias.bw", "name": "ENCSR310UDW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR310UDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (40 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310UDW/chrombpnet_model_feb15_fold_1/full_ENCSR310UDW.counts.bigwig", "name": "ENCSR310UDW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR310UDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (40 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310UDW/chrombpnet_model_feb15_fold_1/full_ENCSR310UDW.profile.bigwig", "name": "ENCSR310UDW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR310UDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (40 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR133WJY/preprocessing/bigWigs/ENCSR133WJY.bigWig", "name": "ENCSR133WJY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR133WJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133WJY/chrombpnet_model_feb15_fold_1/ENCSR133WJY_w_bias.bw", "name": "ENCSR133WJY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133WJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133WJY/chrombpnet_model_feb15_fold_1/ENCSR133WJY_wo_bias.bw", "name": "ENCSR133WJY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133WJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133WJY/chrombpnet_model_feb15_fold_1/full_ENCSR133WJY.counts.bigwig", "name": "ENCSR133WJY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133WJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133WJY/chrombpnet_model_feb15_fold_1/full_ENCSR133WJY.profile.bigwig", "name": "ENCSR133WJY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133WJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR074WMH/preprocessing/bigWigs/ENCSR074WMH.bigWig", "name": "ENCSR074WMH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR074WMH" ], "assay": "ATAC", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR074WMH/chrombpnet_model_feb15_fold_1/ENCSR074WMH_w_bias.bw", "name": "ENCSR074WMH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR074WMH" ], "assay": "ATAC", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR074WMH/chrombpnet_model_feb15_fold_1/ENCSR074WMH_wo_bias.bw", "name": "ENCSR074WMH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR074WMH" ], "assay": "ATAC", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR074WMH/chrombpnet_model_feb15_fold_1/full_ENCSR074WMH.counts.bigwig", "name": "ENCSR074WMH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR074WMH" ], "assay": "ATAC", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR074WMH/chrombpnet_model_feb15_fold_1/full_ENCSR074WMH.profile.bigwig", "name": "ENCSR074WMH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR074WMH" ], "assay": "ATAC", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR925LGW/preprocessing/bigWigs/ENCSR925LGW.bigWig", "name": "ENCSR925LGW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR925LGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR925LGW/chrombpnet_model_feb15_fold_1/ENCSR925LGW_w_bias.bw", "name": "ENCSR925LGW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR925LGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR925LGW/chrombpnet_model_feb15_fold_1/ENCSR925LGW_wo_bias.bw", "name": "ENCSR925LGW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR925LGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR925LGW/chrombpnet_model_feb15_fold_1/full_ENCSR925LGW.counts.bigwig", "name": "ENCSR925LGW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR925LGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR925LGW/chrombpnet_model_feb15_fold_1/full_ENCSR925LGW.profile.bigwig", "name": "ENCSR925LGW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR925LGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR600ZHS/preprocessing/bigWigs/ENCSR600ZHS.bigWig", "name": "ENCSR600ZHS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR600ZHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR600ZHS/chrombpnet_model_feb15_fold_1/ENCSR600ZHS_w_bias.bw", "name": "ENCSR600ZHS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR600ZHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR600ZHS/chrombpnet_model_feb15_fold_1/ENCSR600ZHS_wo_bias.bw", "name": "ENCSR600ZHS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR600ZHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR600ZHS/chrombpnet_model_feb15_fold_1/full_ENCSR600ZHS.counts.bigwig", "name": "ENCSR600ZHS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR600ZHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR600ZHS/chrombpnet_model_feb15_fold_1/full_ENCSR600ZHS.profile.bigwig", "name": "ENCSR600ZHS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR600ZHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR808ZMK/preprocessing/bigWigs/ENCSR808ZMK.bigWig", "name": "ENCSR808ZMK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR808ZMK" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808ZMK/chrombpnet_model_feb15_fold_1/ENCSR808ZMK_w_bias.bw", "name": "ENCSR808ZMK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR808ZMK" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808ZMK/chrombpnet_model_feb15_fold_1/ENCSR808ZMK_wo_bias.bw", "name": "ENCSR808ZMK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR808ZMK" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808ZMK/chrombpnet_model_feb15_fold_1/full_ENCSR808ZMK.counts.bigwig", "name": "ENCSR808ZMK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR808ZMK" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808ZMK/chrombpnet_model_feb15_fold_1/full_ENCSR808ZMK.profile.bigwig", "name": "ENCSR808ZMK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR808ZMK" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR695FLC/preprocessing/bigWigs/ENCSR695FLC.bigWig", "name": "ENCSR695FLC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR695FLC" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR695FLC/chrombpnet_model_feb15_fold_1/ENCSR695FLC_w_bias.bw", "name": "ENCSR695FLC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR695FLC" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR695FLC/chrombpnet_model_feb15_fold_1/ENCSR695FLC_wo_bias.bw", "name": "ENCSR695FLC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR695FLC" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR695FLC/chrombpnet_model_feb15_fold_1/full_ENCSR695FLC.counts.bigwig", "name": "ENCSR695FLC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR695FLC" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR695FLC/chrombpnet_model_feb15_fold_1/full_ENCSR695FLC.profile.bigwig", "name": "ENCSR695FLC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR695FLC" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR836FIL/preprocessing/bigWigs/ENCSR836FIL.bigWig", "name": "ENCSR836FIL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR836FIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (40 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR836FIL/chrombpnet_model_feb15_fold_1/ENCSR836FIL_w_bias.bw", "name": "ENCSR836FIL ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR836FIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (40 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR836FIL/chrombpnet_model_feb15_fold_1/ENCSR836FIL_wo_bias.bw", "name": "ENCSR836FIL ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR836FIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (40 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR836FIL/chrombpnet_model_feb15_fold_1/full_ENCSR836FIL.counts.bigwig", "name": "ENCSR836FIL ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR836FIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (40 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR836FIL/chrombpnet_model_feb15_fold_1/full_ENCSR836FIL.profile.bigwig", "name": "ENCSR836FIL ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR836FIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (40 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR245LNF/preprocessing/bigWigs/ENCSR245LNF.bigWig", "name": "ENCSR245LNF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR245LNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR245LNF/chrombpnet_model_feb15_fold_1/ENCSR245LNF_w_bias.bw", "name": "ENCSR245LNF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR245LNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR245LNF/chrombpnet_model_feb15_fold_1/ENCSR245LNF_wo_bias.bw", "name": "ENCSR245LNF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR245LNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR245LNF/chrombpnet_model_feb15_fold_1/full_ENCSR245LNF.counts.bigwig", "name": "ENCSR245LNF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR245LNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR245LNF/chrombpnet_model_feb15_fold_1/full_ENCSR245LNF.profile.bigwig", "name": "ENCSR245LNF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR245LNF" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR923WGJ/preprocessing/bigWigs/ENCSR923WGJ.bigWig", "name": "ENCSR923WGJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR923WGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 4 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR923WGJ/chrombpnet_model_feb15_fold_1/ENCSR923WGJ_w_bias.bw", "name": "ENCSR923WGJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR923WGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 4 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR923WGJ/chrombpnet_model_feb15_fold_1/ENCSR923WGJ_wo_bias.bw", "name": "ENCSR923WGJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR923WGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 4 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR923WGJ/chrombpnet_model_feb15_fold_1/full_ENCSR923WGJ.counts.bigwig", "name": "ENCSR923WGJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR923WGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 4 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR923WGJ/chrombpnet_model_feb15_fold_1/full_ENCSR923WGJ.profile.bigwig", "name": "ENCSR923WGJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR923WGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 4 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR158XTU/preprocessing/bigWigs/ENCSR158XTU.bigWig", "name": "ENCSR158XTU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR158XTU" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158XTU/chrombpnet_model_feb15_fold_1/ENCSR158XTU_w_bias.bw", "name": "ENCSR158XTU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR158XTU" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158XTU/chrombpnet_model_feb15_fold_1/ENCSR158XTU_wo_bias.bw", "name": "ENCSR158XTU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR158XTU" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158XTU/chrombpnet_model_feb15_fold_1/full_ENCSR158XTU.counts.bigwig", "name": "ENCSR158XTU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR158XTU" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158XTU/chrombpnet_model_feb15_fold_1/full_ENCSR158XTU.profile.bigwig", "name": "ENCSR158XTU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR158XTU" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 2 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR290YMN/preprocessing/bigWigs/ENCSR290YMN.bigWig", "name": "ENCSR290YMN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR290YMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 0.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290YMN/chrombpnet_model_feb15_fold_1/ENCSR290YMN_w_bias.bw", "name": "ENCSR290YMN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR290YMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 0.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290YMN/chrombpnet_model_feb15_fold_1/ENCSR290YMN_wo_bias.bw", "name": "ENCSR290YMN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR290YMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 0.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290YMN/chrombpnet_model_feb15_fold_1/full_ENCSR290YMN.counts.bigwig", "name": "ENCSR290YMN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR290YMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 0.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290YMN/chrombpnet_model_feb15_fold_1/full_ENCSR290YMN.profile.bigwig", "name": "ENCSR290YMN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR290YMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 0.5 days", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR422RPD/preprocessing/bigWigs/ENCSR422RPD.bigWig", "name": "ENCSR422RPD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR422RPD" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21717", "biosample term name": "GM21717", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422RPD/chrombpnet_model_feb15_fold_1/ENCSR422RPD_w_bias.bw", "name": "ENCSR422RPD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR422RPD" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21717", "biosample term name": "GM21717", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422RPD/chrombpnet_model_feb15_fold_1/ENCSR422RPD_wo_bias.bw", "name": "ENCSR422RPD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR422RPD" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21717", "biosample term name": "GM21717", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422RPD/chrombpnet_model_feb15_fold_1/full_ENCSR422RPD.counts.bigwig", "name": "ENCSR422RPD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR422RPD" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21717", "biosample term name": "GM21717", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR422RPD/chrombpnet_model_feb15_fold_1/full_ENCSR422RPD.profile.bigwig", "name": "ENCSR422RPD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR422RPD" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21717", "biosample term name": "GM21717", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR308HPZ/preprocessing/bigWigs/ENCSR308HPZ.bigWig", "name": "ENCSR308HPZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR308HPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR308HPZ/chrombpnet_model_feb15_fold_1/ENCSR308HPZ_w_bias.bw", "name": "ENCSR308HPZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR308HPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR308HPZ/chrombpnet_model_feb15_fold_1/ENCSR308HPZ_wo_bias.bw", "name": "ENCSR308HPZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR308HPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR308HPZ/chrombpnet_model_feb15_fold_1/full_ENCSR308HPZ.counts.bigwig", "name": "ENCSR308HPZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR308HPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR308HPZ/chrombpnet_model_feb15_fold_1/full_ENCSR308HPZ.profile.bigwig", "name": "ENCSR308HPZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR308HPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR551CSY/preprocessing/bigWigs/ENCSR551CSY.bigWig", "name": "ENCSR551CSY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR551CSY" ], "assay": "ATAC", "biosample summary": "Homo sapiens mesenteric fat pad tissue male adult (26 years)", "biosample term name": "mesenteric fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR551CSY/chrombpnet_model_feb15_fold_1/ENCSR551CSY_w_bias.bw", "name": "ENCSR551CSY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR551CSY" ], "assay": "ATAC", "biosample summary": "Homo sapiens mesenteric fat pad tissue male adult (26 years)", "biosample term name": "mesenteric fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR551CSY/chrombpnet_model_feb15_fold_1/ENCSR551CSY_wo_bias.bw", "name": "ENCSR551CSY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR551CSY" ], "assay": "ATAC", "biosample summary": "Homo sapiens mesenteric fat pad tissue male adult (26 years)", "biosample term name": "mesenteric fat pad", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR551CSY/chrombpnet_model_feb15_fold_1/full_ENCSR551CSY.counts.bigwig", "name": "ENCSR551CSY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR551CSY" ], "assay": "ATAC", "biosample summary": "Homo sapiens mesenteric fat pad tissue male adult (26 years)", "biosample term name": "mesenteric fat pad", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR551CSY/chrombpnet_model_feb15_fold_1/full_ENCSR551CSY.profile.bigwig", "name": "ENCSR551CSY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR551CSY" ], "assay": "ATAC", "biosample summary": "Homo sapiens mesenteric fat pad tissue male adult (26 years)", "biosample term name": "mesenteric fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR647AOY/preprocessing/bigWigs/ENCSR647AOY.bigWig", "name": "ENCSR647AOY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR647AOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR647AOY/chrombpnet_model_feb15_fold_1/ENCSR647AOY_w_bias.bw", "name": "ENCSR647AOY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR647AOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR647AOY/chrombpnet_model_feb15_fold_1/ENCSR647AOY_wo_bias.bw", "name": "ENCSR647AOY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR647AOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR647AOY/chrombpnet_model_feb15_fold_1/full_ENCSR647AOY.counts.bigwig", "name": "ENCSR647AOY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR647AOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR647AOY/chrombpnet_model_feb15_fold_1/full_ENCSR647AOY.profile.bigwig", "name": "ENCSR647AOY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR647AOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR220ASC/preprocessing/bigWigs/ENCSR220ASC.bigWig", "name": "ENCSR220ASC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR220ASC" ], "assay": "ATAC", "biosample summary": "Homo sapiens A549", "biosample term name": "A549", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR220ASC/chrombpnet_model_feb15_fold_1/ENCSR220ASC_w_bias.bw", "name": "ENCSR220ASC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR220ASC" ], "assay": "ATAC", "biosample summary": "Homo sapiens A549", "biosample term name": "A549", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR220ASC/chrombpnet_model_feb15_fold_1/ENCSR220ASC_wo_bias.bw", "name": "ENCSR220ASC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR220ASC" ], "assay": "ATAC", "biosample summary": "Homo sapiens A549", "biosample term name": "A549", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR220ASC/chrombpnet_model_feb15_fold_1/full_ENCSR220ASC.counts.bigwig", "name": "ENCSR220ASC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR220ASC" ], "assay": "ATAC", "biosample summary": "Homo sapiens A549", "biosample term name": "A549", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR220ASC/chrombpnet_model_feb15_fold_1/full_ENCSR220ASC.profile.bigwig", "name": "ENCSR220ASC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR220ASC" ], "assay": "ATAC", "biosample summary": "Homo sapiens A549", "biosample term name": "A549", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR095QNB/preprocessing/bigWigs/ENCSR095QNB.bigWig", "name": "ENCSR095QNB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR095QNB" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR095QNB/chrombpnet_model_feb15_fold_1/ENCSR095QNB_w_bias.bw", "name": "ENCSR095QNB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR095QNB" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR095QNB/chrombpnet_model_feb15_fold_1/ENCSR095QNB_wo_bias.bw", "name": "ENCSR095QNB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR095QNB" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR095QNB/chrombpnet_model_feb15_fold_1/full_ENCSR095QNB.counts.bigwig", "name": "ENCSR095QNB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR095QNB" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR095QNB/chrombpnet_model_feb15_fold_1/full_ENCSR095QNB.profile.bigwig", "name": "ENCSR095QNB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR095QNB" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR872WGW/preprocessing/bigWigs/ENCSR872WGW.bigWig", "name": "ENCSR872WGW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR872WGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872WGW/chrombpnet_model_feb15_fold_1/ENCSR872WGW_w_bias.bw", "name": "ENCSR872WGW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR872WGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872WGW/chrombpnet_model_feb15_fold_1/ENCSR872WGW_wo_bias.bw", "name": "ENCSR872WGW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR872WGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872WGW/chrombpnet_model_feb15_fold_1/full_ENCSR872WGW.counts.bigwig", "name": "ENCSR872WGW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR872WGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872WGW/chrombpnet_model_feb15_fold_1/full_ENCSR872WGW.profile.bigwig", "name": "ENCSR872WGW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR872WGW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR025MEO/preprocessing/bigWigs/ENCSR025MEO.bigWig", "name": "ENCSR025MEO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR025MEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03354", "biosample term name": "HG03354", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR025MEO/chrombpnet_model_feb15_fold_1/ENCSR025MEO_w_bias.bw", "name": "ENCSR025MEO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR025MEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03354", "biosample term name": "HG03354", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR025MEO/chrombpnet_model_feb15_fold_1/ENCSR025MEO_wo_bias.bw", "name": "ENCSR025MEO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR025MEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03354", "biosample term name": "HG03354", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR025MEO/chrombpnet_model_feb15_fold_1/full_ENCSR025MEO.counts.bigwig", "name": "ENCSR025MEO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR025MEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03354", "biosample term name": "HG03354", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR025MEO/chrombpnet_model_feb15_fold_1/full_ENCSR025MEO.profile.bigwig", "name": "ENCSR025MEO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR025MEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03354", "biosample term name": "HG03354", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR660WSB/preprocessing/bigWigs/ENCSR660WSB.bigWig", "name": "ENCSR660WSB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR660WSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR660WSB/chrombpnet_model_feb15_fold_1/ENCSR660WSB_w_bias.bw", "name": "ENCSR660WSB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR660WSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR660WSB/chrombpnet_model_feb15_fold_1/ENCSR660WSB_wo_bias.bw", "name": "ENCSR660WSB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR660WSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR660WSB/chrombpnet_model_feb15_fold_1/full_ENCSR660WSB.counts.bigwig", "name": "ENCSR660WSB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR660WSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR660WSB/chrombpnet_model_feb15_fold_1/full_ENCSR660WSB.profile.bigwig", "name": "ENCSR660WSB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR660WSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR591PIX/preprocessing/bigWigs/ENCSR591PIX.bigWig", "name": "ENCSR591PIX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR591PIX" ], "assay": "ATAC", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR591PIX/chrombpnet_model_feb15_fold_1/ENCSR591PIX_w_bias.bw", "name": "ENCSR591PIX ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR591PIX" ], "assay": "ATAC", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR591PIX/chrombpnet_model_feb15_fold_1/ENCSR591PIX_wo_bias.bw", "name": "ENCSR591PIX ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR591PIX" ], "assay": "ATAC", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR591PIX/chrombpnet_model_feb15_fold_1/full_ENCSR591PIX.counts.bigwig", "name": "ENCSR591PIX ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR591PIX" ], "assay": "ATAC", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR591PIX/chrombpnet_model_feb15_fold_1/full_ENCSR591PIX.profile.bigwig", "name": "ENCSR591PIX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR591PIX" ], "assay": "ATAC", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR635AIF/preprocessing/bigWigs/ENCSR635AIF.bigWig", "name": "ENCSR635AIF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR635AIF" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19468", "biosample term name": "GM19468", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR635AIF/chrombpnet_model_feb15_fold_1/ENCSR635AIF_w_bias.bw", "name": "ENCSR635AIF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635AIF" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19468", "biosample term name": "GM19468", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR635AIF/chrombpnet_model_feb15_fold_1/ENCSR635AIF_wo_bias.bw", "name": "ENCSR635AIF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635AIF" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19468", "biosample term name": "GM19468", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR635AIF/chrombpnet_model_feb15_fold_1/full_ENCSR635AIF.counts.bigwig", "name": "ENCSR635AIF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635AIF" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19468", "biosample term name": "GM19468", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR635AIF/chrombpnet_model_feb15_fold_1/full_ENCSR635AIF.profile.bigwig", "name": "ENCSR635AIF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635AIF" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19468", "biosample term name": "GM19468", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR329XFZ/preprocessing/bigWigs/ENCSR329XFZ.bigWig", "name": "ENCSR329XFZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR329XFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR329XFZ/chrombpnet_model_feb15_fold_1/ENCSR329XFZ_w_bias.bw", "name": "ENCSR329XFZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR329XFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR329XFZ/chrombpnet_model_feb15_fold_1/ENCSR329XFZ_wo_bias.bw", "name": "ENCSR329XFZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR329XFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR329XFZ/chrombpnet_model_feb15_fold_1/full_ENCSR329XFZ.counts.bigwig", "name": "ENCSR329XFZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR329XFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR329XFZ/chrombpnet_model_feb15_fold_1/full_ENCSR329XFZ.profile.bigwig", "name": "ENCSR329XFZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR329XFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR544YXV/preprocessing/bigWigs/ENCSR544YXV.bigWig", "name": "ENCSR544YXV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR544YXV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR544YXV/chrombpnet_model_feb15_fold_1/ENCSR544YXV_w_bias.bw", "name": "ENCSR544YXV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR544YXV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR544YXV/chrombpnet_model_feb15_fold_1/ENCSR544YXV_wo_bias.bw", "name": "ENCSR544YXV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR544YXV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR544YXV/chrombpnet_model_feb15_fold_1/full_ENCSR544YXV.counts.bigwig", "name": "ENCSR544YXV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR544YXV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR544YXV/chrombpnet_model_feb15_fold_1/full_ENCSR544YXV.profile.bigwig", "name": "ENCSR544YXV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR544YXV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR679NRJ/preprocessing/bigWigs/ENCSR679NRJ.bigWig", "name": "ENCSR679NRJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR679NRJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR679NRJ/chrombpnet_model_feb15_fold_1/ENCSR679NRJ_w_bias.bw", "name": "ENCSR679NRJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR679NRJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR679NRJ/chrombpnet_model_feb15_fold_1/ENCSR679NRJ_wo_bias.bw", "name": "ENCSR679NRJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR679NRJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR679NRJ/chrombpnet_model_feb15_fold_1/full_ENCSR679NRJ.counts.bigwig", "name": "ENCSR679NRJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR679NRJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR679NRJ/chrombpnet_model_feb15_fold_1/full_ENCSR679NRJ.profile.bigwig", "name": "ENCSR679NRJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR679NRJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 1 hour", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR065CER/preprocessing/bigWigs/ENCSR065CER.bigWig", "name": "ENCSR065CER observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR065CER" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR065CER/chrombpnet_model_feb15_fold_1/ENCSR065CER_w_bias.bw", "name": "ENCSR065CER ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR065CER" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR065CER/chrombpnet_model_feb15_fold_1/ENCSR065CER_wo_bias.bw", "name": "ENCSR065CER ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR065CER" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR065CER/chrombpnet_model_feb15_fold_1/full_ENCSR065CER.counts.bigwig", "name": "ENCSR065CER ATAC corrected 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"name": "ENCSR222SCA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR222SCA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR222SCA/chrombpnet_model_feb15_fold_1/ENCSR222SCA_w_bias.bw", "name": "ENCSR222SCA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR222SCA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR222SCA/chrombpnet_model_feb15_fold_1/ENCSR222SCA_wo_bias.bw", "name": "ENCSR222SCA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR222SCA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR222SCA/chrombpnet_model_feb15_fold_1/full_ENCSR222SCA.counts.bigwig", "name": "ENCSR222SCA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR222SCA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR222SCA/chrombpnet_model_feb15_fold_1/full_ENCSR222SCA.profile.bigwig", "name": "ENCSR222SCA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR222SCA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR648JJT/preprocessing/bigWigs/ENCSR648JJT.bigWig", "name": "ENCSR648JJT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR648JJT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR648JJT/chrombpnet_model_feb15_fold_1/ENCSR648JJT_w_bias.bw", "name": "ENCSR648JJT ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR648JJT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR648JJT/chrombpnet_model_feb15_fold_1/ENCSR648JJT_wo_bias.bw", "name": "ENCSR648JJT ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR648JJT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR648JJT/chrombpnet_model_feb15_fold_1/full_ENCSR648JJT.counts.bigwig", "name": "ENCSR648JJT ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR648JJT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR648JJT/chrombpnet_model_feb15_fold_1/full_ENCSR648JJT.profile.bigwig", "name": "ENCSR648JJT ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR648JJT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR516YAD/preprocessing/bigWigs/ENCSR516YAD.bigWig", "name": "ENCSR516YAD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR516YAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR516YAD/chrombpnet_model_feb15_fold_1/ENCSR516YAD_w_bias.bw", "name": "ENCSR516YAD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR516YAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR516YAD/chrombpnet_model_feb15_fold_1/ENCSR516YAD_wo_bias.bw", "name": "ENCSR516YAD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR516YAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR516YAD/chrombpnet_model_feb15_fold_1/full_ENCSR516YAD.counts.bigwig", "name": "ENCSR516YAD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR516YAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR516YAD/chrombpnet_model_feb15_fold_1/full_ENCSR516YAD.profile.bigwig", "name": "ENCSR516YAD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR516YAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR535NOD/preprocessing/bigWigs/ENCSR535NOD.bigWig", "name": "ENCSR535NOD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR535NOD" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR535NOD/chrombpnet_model_feb15_fold_1/ENCSR535NOD_w_bias.bw", "name": "ENCSR535NOD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR535NOD" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR535NOD/chrombpnet_model_feb15_fold_1/ENCSR535NOD_wo_bias.bw", "name": "ENCSR535NOD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR535NOD" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR535NOD/chrombpnet_model_feb15_fold_1/full_ENCSR535NOD.counts.bigwig", "name": "ENCSR535NOD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR535NOD" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR535NOD/chrombpnet_model_feb15_fold_1/full_ENCSR535NOD.profile.bigwig", "name": "ENCSR535NOD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR535NOD" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR370QWN/preprocessing/bigWigs/ENCSR370QWN.bigWig", "name": "ENCSR370QWN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR370QWN" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR370QWN/chrombpnet_model_feb15_fold_1/ENCSR370QWN_w_bias.bw", "name": "ENCSR370QWN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR370QWN" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR370QWN/chrombpnet_model_feb15_fold_1/ENCSR370QWN_wo_bias.bw", "name": "ENCSR370QWN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR370QWN" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR370QWN/chrombpnet_model_feb15_fold_1/full_ENCSR370QWN.counts.bigwig", "name": "ENCSR370QWN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR370QWN" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR370QWN/chrombpnet_model_feb15_fold_1/full_ENCSR370QWN.profile.bigwig", "name": "ENCSR370QWN 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"name": "ENCSR459AYS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR459AYS" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR459AYS/chrombpnet_model_feb15_fold_1/ENCSR459AYS_wo_bias.bw", "name": "ENCSR459AYS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR459AYS" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR459AYS/chrombpnet_model_feb15_fold_1/full_ENCSR459AYS.counts.bigwig", "name": "ENCSR459AYS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR459AYS" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR459AYS/chrombpnet_model_feb15_fold_1/full_ENCSR459AYS.profile.bigwig", "name": "ENCSR459AYS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR459AYS" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR290AUK/preprocessing/bigWigs/ENCSR290AUK.bigWig", "name": "ENCSR290AUK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR290AUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290AUK/chrombpnet_model_feb15_fold_1/ENCSR290AUK_w_bias.bw", "name": "ENCSR290AUK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR290AUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290AUK/chrombpnet_model_feb15_fold_1/ENCSR290AUK_wo_bias.bw", "name": "ENCSR290AUK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR290AUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290AUK/chrombpnet_model_feb15_fold_1/full_ENCSR290AUK.counts.bigwig", "name": "ENCSR290AUK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR290AUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR290AUK/chrombpnet_model_feb15_fold_1/full_ENCSR290AUK.profile.bigwig", "name": "ENCSR290AUK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR290AUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR926TFY/preprocessing/bigWigs/ENCSR926TFY.bigWig", "name": "ENCSR926TFY observed", "showOnHubLoad": false, "options": { "aggregateMethod": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR926TFY/chrombpnet_model_feb15_fold_1/full_ENCSR926TFY.profile.bigwig", "name": "ENCSR926TFY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR926TFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR628SXX/preprocessing/bigWigs/ENCSR628SXX.bigWig", "name": "ENCSR628SXX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR628SXX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR628SXX/chrombpnet_model_feb15_fold_1/ENCSR628SXX_w_bias.bw", "name": "ENCSR628SXX ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628SXX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR628SXX/chrombpnet_model_feb15_fold_1/ENCSR628SXX_wo_bias.bw", "name": "ENCSR628SXX ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628SXX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR628SXX/chrombpnet_model_feb15_fold_1/full_ENCSR628SXX.counts.bigwig", "name": "ENCSR628SXX ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628SXX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR628SXX/chrombpnet_model_feb15_fold_1/full_ENCSR628SXX.profile.bigwig", "name": "ENCSR628SXX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628SXX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR605EGR/preprocessing/bigWigs/ENCSR605EGR.bigWig", "name": "ENCSR605EGR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR605EGR" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR605EGR/chrombpnet_model_feb15_fold_1/ENCSR605EGR_w_bias.bw", "name": "ENCSR605EGR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR605EGR" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR605EGR/chrombpnet_model_feb15_fold_1/ENCSR605EGR_wo_bias.bw", "name": "ENCSR605EGR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR605EGR" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR605EGR/chrombpnet_model_feb15_fold_1/full_ENCSR605EGR.counts.bigwig", "name": "ENCSR605EGR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR605EGR" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR605EGR/chrombpnet_model_feb15_fold_1/full_ENCSR605EGR.profile.bigwig", "name": "ENCSR605EGR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR605EGR" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR589ROM/preprocessing/bigWigs/ENCSR589ROM.bigWig", "name": "ENCSR589ROM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR589ROM" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR589ROM/chrombpnet_model_feb15_fold_1/ENCSR589ROM_w_bias.bw", "name": "ENCSR589ROM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR589ROM" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR589ROM/chrombpnet_model_feb15_fold_1/ENCSR589ROM_wo_bias.bw", "name": "ENCSR589ROM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR589ROM" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR589ROM/chrombpnet_model_feb15_fold_1/full_ENCSR589ROM.counts.bigwig", "name": "ENCSR589ROM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR589ROM" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR589ROM/chrombpnet_model_feb15_fold_1/full_ENCSR589ROM.profile.bigwig", "name": "ENCSR589ROM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR589ROM" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR504OUW/preprocessing/bigWigs/ENCSR504OUW.bigWig", "name": "ENCSR504OUW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR504OUW" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR504OUW/chrombpnet_model_feb15_fold_1/ENCSR504OUW_w_bias.bw", "name": "ENCSR504OUW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR504OUW" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR504OUW/chrombpnet_model_feb15_fold_1/ENCSR504OUW_wo_bias.bw", "name": "ENCSR504OUW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR504OUW" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR504OUW/chrombpnet_model_feb15_fold_1/full_ENCSR504OUW.counts.bigwig", "name": "ENCSR504OUW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR504OUW" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR504OUW/chrombpnet_model_feb15_fold_1/full_ENCSR504OUW.profile.bigwig", "name": "ENCSR504OUW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR504OUW" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR411NFB/preprocessing/bigWigs/ENCSR411NFB.bigWig", "name": "ENCSR411NFB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR411NFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR411NFB/chrombpnet_model_feb15_fold_1/ENCSR411NFB_w_bias.bw", "name": "ENCSR411NFB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR411NFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR411NFB/chrombpnet_model_feb15_fold_1/ENCSR411NFB_wo_bias.bw", "name": "ENCSR411NFB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR411NFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR411NFB/chrombpnet_model_feb15_fold_1/full_ENCSR411NFB.counts.bigwig", "name": "ENCSR411NFB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR411NFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR411NFB/chrombpnet_model_feb15_fold_1/full_ENCSR411NFB.profile.bigwig", "name": "ENCSR411NFB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR411NFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR993XED/preprocessing/bigWigs/ENCSR993XED.bigWig", "name": "ENCSR993XED observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR993XED" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR993XED/chrombpnet_model_feb15_fold_1/ENCSR993XED_w_bias.bw", "name": "ENCSR993XED ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR993XED" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR993XED/chrombpnet_model_feb15_fold_1/ENCSR993XED_wo_bias.bw", "name": "ENCSR993XED ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR993XED" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR993XED/chrombpnet_model_feb15_fold_1/full_ENCSR993XED.counts.bigwig", "name": "ENCSR993XED ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR993XED" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR993XED/chrombpnet_model_feb15_fold_1/full_ENCSR993XED.profile.bigwig", "name": "ENCSR993XED ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR993XED" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR854TTM/preprocessing/bigWigs/ENCSR854TTM.bigWig", "name": "ENCSR854TTM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR854TTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854TTM/chrombpnet_model_feb15_fold_1/ENCSR854TTM_w_bias.bw", "name": "ENCSR854TTM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR854TTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854TTM/chrombpnet_model_feb15_fold_1/ENCSR854TTM_wo_bias.bw", "name": "ENCSR854TTM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR854TTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854TTM/chrombpnet_model_feb15_fold_1/full_ENCSR854TTM.counts.bigwig", "name": "ENCSR854TTM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR854TTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854TTM/chrombpnet_model_feb15_fold_1/full_ENCSR854TTM.profile.bigwig", "name": "ENCSR854TTM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR854TTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR258RSH/preprocessing/bigWigs/ENCSR258RSH.bigWig", "name": "ENCSR258RSH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR258RSH" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258RSH/chrombpnet_model_feb15_fold_1/ENCSR258RSH_w_bias.bw", "name": "ENCSR258RSH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258RSH" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258RSH/chrombpnet_model_feb15_fold_1/ENCSR258RSH_wo_bias.bw", "name": "ENCSR258RSH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258RSH" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258RSH/chrombpnet_model_feb15_fold_1/full_ENCSR258RSH.counts.bigwig", "name": "ENCSR258RSH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258RSH" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258RSH/chrombpnet_model_feb15_fold_1/full_ENCSR258RSH.profile.bigwig", "name": "ENCSR258RSH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258RSH" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR174SUM/preprocessing/bigWigs/ENCSR174SUM.bigWig", "name": "ENCSR174SUM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR174SUM" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174SUM/chrombpnet_model_feb15_fold_1/ENCSR174SUM_w_bias.bw", "name": "ENCSR174SUM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR174SUM" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174SUM/chrombpnet_model_feb15_fold_1/ENCSR174SUM_wo_bias.bw", "name": "ENCSR174SUM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR174SUM" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174SUM/chrombpnet_model_feb15_fold_1/full_ENCSR174SUM.counts.bigwig", "name": "ENCSR174SUM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR174SUM" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174SUM/chrombpnet_model_feb15_fold_1/full_ENCSR174SUM.profile.bigwig", "name": "ENCSR174SUM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR174SUM" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR248ZAC/preprocessing/bigWigs/ENCSR248ZAC.bigWig", "name": "ENCSR248ZAC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR248ZAC" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR248ZAC/chrombpnet_model_feb15_fold_1/ENCSR248ZAC_w_bias.bw", "name": "ENCSR248ZAC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR248ZAC" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR248ZAC/chrombpnet_model_feb15_fold_1/ENCSR248ZAC_wo_bias.bw", "name": "ENCSR248ZAC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR248ZAC" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR248ZAC/chrombpnet_model_feb15_fold_1/full_ENCSR248ZAC.counts.bigwig", "name": "ENCSR248ZAC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR248ZAC" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR248ZAC/chrombpnet_model_feb15_fold_1/full_ENCSR248ZAC.profile.bigwig", "name": "ENCSR248ZAC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR248ZAC" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR915MTG/preprocessing/bigWigs/ENCSR915MTG.bigWig", "name": "ENCSR915MTG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR915MTG" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR915MTG/chrombpnet_model_feb15_fold_1/ENCSR915MTG_w_bias.bw", "name": "ENCSR915MTG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR915MTG" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR915MTG/chrombpnet_model_feb15_fold_1/ENCSR915MTG_wo_bias.bw", "name": "ENCSR915MTG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR915MTG" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR915MTG/chrombpnet_model_feb15_fold_1/full_ENCSR915MTG.counts.bigwig", "name": "ENCSR915MTG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR915MTG" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR915MTG/chrombpnet_model_feb15_fold_1/full_ENCSR915MTG.profile.bigwig", "name": "ENCSR915MTG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR915MTG" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR603LVR/preprocessing/bigWigs/ENCSR603LVR.bigWig", "name": "ENCSR603LVR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR603LVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR603LVR/chrombpnet_model_feb15_fold_1/ENCSR603LVR_w_bias.bw", "name": "ENCSR603LVR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR603LVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR603LVR/chrombpnet_model_feb15_fold_1/ENCSR603LVR_wo_bias.bw", "name": "ENCSR603LVR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR603LVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR603LVR/chrombpnet_model_feb15_fold_1/full_ENCSR603LVR.counts.bigwig", "name": "ENCSR603LVR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR603LVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR603LVR/chrombpnet_model_feb15_fold_1/full_ENCSR603LVR.profile.bigwig", "name": "ENCSR603LVR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR603LVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR379NMT/preprocessing/bigWigs/ENCSR379NMT.bigWig", "name": "ENCSR379NMT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR379NMT" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell male adult (40 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR379NMT/chrombpnet_model_feb15_fold_1/ENCSR379NMT_w_bias.bw", "name": "ENCSR379NMT ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR379NMT" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell male adult (40 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR379NMT/chrombpnet_model_feb15_fold_1/ENCSR379NMT_wo_bias.bw", "name": "ENCSR379NMT ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR379NMT" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell male adult (40 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR379NMT/chrombpnet_model_feb15_fold_1/full_ENCSR379NMT.counts.bigwig", "name": "ENCSR379NMT ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR379NMT" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell male adult (40 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR379NMT/chrombpnet_model_feb15_fold_1/full_ENCSR379NMT.profile.bigwig", "name": "ENCSR379NMT ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR379NMT" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell male adult (40 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR302PTB/preprocessing/bigWigs/ENCSR302PTB.bigWig", "name": "ENCSR302PTB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR302PTB" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated memory B cell male adult (40 years) treated with 10 \u03bcg/mL anti-IgM for 72 hours, 1 \u03bcg/mL anti-CD40 for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR302PTB/chrombpnet_model_feb15_fold_1/ENCSR302PTB_w_bias.bw", "name": "ENCSR302PTB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR302PTB" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated memory B cell male adult (40 years) treated with 10 \u03bcg/mL anti-IgM for 72 hours, 1 \u03bcg/mL anti-CD40 for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR302PTB/chrombpnet_model_feb15_fold_1/ENCSR302PTB_wo_bias.bw", "name": "ENCSR302PTB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR302PTB" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated memory B cell male adult (40 years) treated with 10 \u03bcg/mL anti-IgM for 72 hours, 1 \u03bcg/mL anti-CD40 for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR302PTB/chrombpnet_model_feb15_fold_1/full_ENCSR302PTB.counts.bigwig", "name": "ENCSR302PTB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR302PTB" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated memory B cell male adult (40 years) treated with 10 \u03bcg/mL anti-IgM for 72 hours, 1 \u03bcg/mL anti-CD40 for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR302PTB/chrombpnet_model_feb15_fold_1/full_ENCSR302PTB.profile.bigwig", "name": "ENCSR302PTB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR302PTB" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated memory B cell male adult (40 years) treated with 10 \u03bcg/mL anti-IgM for 72 hours, 1 \u03bcg/mL anti-CD40 for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR977LVI/preprocessing/bigWigs/ENCSR977LVI.bigWig", "name": "ENCSR977LVI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR977LVI" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR977LVI/chrombpnet_model_feb15_fold_1/ENCSR977LVI_w_bias.bw", "name": "ENCSR977LVI ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR977LVI" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR977LVI/chrombpnet_model_feb15_fold_1/ENCSR977LVI_wo_bias.bw", "name": "ENCSR977LVI ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR977LVI" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR977LVI/chrombpnet_model_feb15_fold_1/full_ENCSR977LVI.counts.bigwig", "name": "ENCSR977LVI ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR977LVI" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR977LVI/chrombpnet_model_feb15_fold_1/full_ENCSR977LVI.profile.bigwig", "name": "ENCSR977LVI ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR977LVI" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR611BQR/preprocessing/bigWigs/ENCSR611BQR.bigWig", "name": "ENCSR611BQR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR611BQR" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR611BQR/chrombpnet_model_feb15_fold_1/ENCSR611BQR_w_bias.bw", "name": "ENCSR611BQR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR611BQR" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR611BQR/chrombpnet_model_feb15_fold_1/ENCSR611BQR_wo_bias.bw", "name": "ENCSR611BQR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR611BQR" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR611BQR/chrombpnet_model_feb15_fold_1/full_ENCSR611BQR.counts.bigwig", "name": "ENCSR611BQR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR611BQR" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR611BQR/chrombpnet_model_feb15_fold_1/full_ENCSR611BQR.profile.bigwig", "name": "ENCSR611BQR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR611BQR" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR808HWS/preprocessing/bigWigs/ENCSR808HWS.bigWig", "name": "ENCSR808HWS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR808HWS" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808HWS/chrombpnet_model_feb15_fold_1/ENCSR808HWS_w_bias.bw", "name": "ENCSR808HWS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR808HWS" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808HWS/chrombpnet_model_feb15_fold_1/ENCSR808HWS_wo_bias.bw", "name": "ENCSR808HWS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR808HWS" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808HWS/chrombpnet_model_feb15_fold_1/full_ENCSR808HWS.counts.bigwig", "name": "ENCSR808HWS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR808HWS" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR808HWS/chrombpnet_model_feb15_fold_1/full_ENCSR808HWS.profile.bigwig", "name": "ENCSR808HWS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR808HWS" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR991PBP/preprocessing/bigWigs/ENCSR991PBP.bigWig", "name": "ENCSR991PBP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR991PBP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR991PBP/chrombpnet_model_feb15_fold_1/ENCSR991PBP_w_bias.bw", "name": "ENCSR991PBP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR991PBP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR991PBP/chrombpnet_model_feb15_fold_1/ENCSR991PBP_wo_bias.bw", "name": "ENCSR991PBP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR991PBP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR991PBP/chrombpnet_model_feb15_fold_1/full_ENCSR991PBP.counts.bigwig", "name": "ENCSR991PBP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR991PBP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR991PBP/chrombpnet_model_feb15_fold_1/full_ENCSR991PBP.profile.bigwig", "name": "ENCSR991PBP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR991PBP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR299LSN/preprocessing/bigWigs/ENCSR299LSN.bigWig", "name": "ENCSR299LSN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR299LSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR299LSN/chrombpnet_model_feb15_fold_1/ENCSR299LSN_w_bias.bw", "name": "ENCSR299LSN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR299LSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR299LSN/chrombpnet_model_feb15_fold_1/ENCSR299LSN_wo_bias.bw", "name": "ENCSR299LSN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR299LSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR299LSN/chrombpnet_model_feb15_fold_1/full_ENCSR299LSN.counts.bigwig", "name": "ENCSR299LSN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR299LSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR299LSN/chrombpnet_model_feb15_fold_1/full_ENCSR299LSN.profile.bigwig", "name": "ENCSR299LSN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR299LSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR452COS/preprocessing/bigWigs/ENCSR452COS.bigWig", "name": "ENCSR452COS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR452COS" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (50 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452COS/chrombpnet_model_feb15_fold_1/ENCSR452COS_w_bias.bw", "name": "ENCSR452COS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452COS" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (50 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452COS/chrombpnet_model_feb15_fold_1/ENCSR452COS_wo_bias.bw", "name": "ENCSR452COS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452COS" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (50 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452COS/chrombpnet_model_feb15_fold_1/full_ENCSR452COS.counts.bigwig", "name": "ENCSR452COS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452COS" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (50 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452COS/chrombpnet_model_feb15_fold_1/full_ENCSR452COS.profile.bigwig", "name": "ENCSR452COS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452COS" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (50 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR335LHS/preprocessing/bigWigs/ENCSR335LHS.bigWig", "name": "ENCSR335LHS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR335LHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (33 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335LHS/chrombpnet_model_feb15_fold_1/ENCSR335LHS_w_bias.bw", "name": "ENCSR335LHS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335LHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (33 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335LHS/chrombpnet_model_feb15_fold_1/ENCSR335LHS_wo_bias.bw", "name": "ENCSR335LHS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335LHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (33 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335LHS/chrombpnet_model_feb15_fold_1/full_ENCSR335LHS.counts.bigwig", "name": "ENCSR335LHS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335LHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (33 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335LHS/chrombpnet_model_feb15_fold_1/full_ENCSR335LHS.profile.bigwig", "name": "ENCSR335LHS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335LHS" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (33 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR305QTE/preprocessing/bigWigs/ENCSR305QTE.bigWig", "name": "ENCSR305QTE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR305QTE" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR305QTE/chrombpnet_model_feb15_fold_1/ENCSR305QTE_w_bias.bw", "name": "ENCSR305QTE ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR305QTE" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR305QTE/chrombpnet_model_feb15_fold_1/ENCSR305QTE_wo_bias.bw", "name": "ENCSR305QTE ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR305QTE" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR305QTE/chrombpnet_model_feb15_fold_1/full_ENCSR305QTE.counts.bigwig", "name": "ENCSR305QTE ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR305QTE" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR305QTE/chrombpnet_model_feb15_fold_1/full_ENCSR305QTE.profile.bigwig", "name": "ENCSR305QTE ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR305QTE" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (47 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR545UJP/preprocessing/bigWigs/ENCSR545UJP.bigWig", "name": "ENCSR545UJP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR545UJP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell nuclear fraction male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR545UJP/chrombpnet_model_feb15_fold_1/ENCSR545UJP_w_bias.bw", "name": "ENCSR545UJP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR545UJP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell nuclear fraction male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR545UJP/chrombpnet_model_feb15_fold_1/ENCSR545UJP_wo_bias.bw", "name": "ENCSR545UJP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR545UJP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell nuclear fraction male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR545UJP/chrombpnet_model_feb15_fold_1/full_ENCSR545UJP.counts.bigwig", "name": "ENCSR545UJP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR545UJP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell nuclear fraction male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR545UJP/chrombpnet_model_feb15_fold_1/full_ENCSR545UJP.profile.bigwig", "name": "ENCSR545UJP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR545UJP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell nuclear fraction male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR092SRS/preprocessing/bigWigs/ENCSR092SRS.bigWig", "name": "ENCSR092SRS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR092SRS" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR092SRS/chrombpnet_model_feb15_fold_1/ENCSR092SRS_w_bias.bw", "name": "ENCSR092SRS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR092SRS" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR092SRS/chrombpnet_model_feb15_fold_1/ENCSR092SRS_wo_bias.bw", "name": "ENCSR092SRS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR092SRS" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR092SRS/chrombpnet_model_feb15_fold_1/full_ENCSR092SRS.counts.bigwig", "name": "ENCSR092SRS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR092SRS" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR092SRS/chrombpnet_model_feb15_fold_1/full_ENCSR092SRS.profile.bigwig", "name": "ENCSR092SRS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR092SRS" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR044ATC/preprocessing/bigWigs/ENCSR044ATC.bigWig", "name": "ENCSR044ATC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR044ATC" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR044ATC/chrombpnet_model_feb15_fold_1/ENCSR044ATC_w_bias.bw", "name": "ENCSR044ATC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR044ATC" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR044ATC/chrombpnet_model_feb15_fold_1/ENCSR044ATC_wo_bias.bw", "name": "ENCSR044ATC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR044ATC" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR044ATC/chrombpnet_model_feb15_fold_1/full_ENCSR044ATC.counts.bigwig", "name": "ENCSR044ATC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR044ATC" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR044ATC/chrombpnet_model_feb15_fold_1/full_ENCSR044ATC.profile.bigwig", "name": "ENCSR044ATC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR044ATC" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR477YSU/preprocessing/bigWigs/ENCSR477YSU.bigWig", "name": "ENCSR477YSU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR477YSU" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR477YSU/chrombpnet_model_feb15_fold_1/ENCSR477YSU_w_bias.bw", "name": "ENCSR477YSU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR477YSU" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR477YSU/chrombpnet_model_feb15_fold_1/ENCSR477YSU_wo_bias.bw", "name": "ENCSR477YSU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR477YSU" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR477YSU/chrombpnet_model_feb15_fold_1/full_ENCSR477YSU.counts.bigwig", "name": "ENCSR477YSU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR477YSU" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR477YSU/chrombpnet_model_feb15_fold_1/full_ENCSR477YSU.profile.bigwig", "name": "ENCSR477YSU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR477YSU" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR094QFZ/preprocessing/bigWigs/ENCSR094QFZ.bigWig", "name": "ENCSR094QFZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR094QFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR094QFZ/chrombpnet_model_feb15_fold_1/ENCSR094QFZ_w_bias.bw", "name": "ENCSR094QFZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR094QFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR094QFZ/chrombpnet_model_feb15_fold_1/ENCSR094QFZ_wo_bias.bw", "name": "ENCSR094QFZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR094QFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR094QFZ/chrombpnet_model_feb15_fold_1/full_ENCSR094QFZ.counts.bigwig", "name": "ENCSR094QFZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR094QFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR094QFZ/chrombpnet_model_feb15_fold_1/full_ENCSR094QFZ.profile.bigwig", "name": "ENCSR094QFZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR094QFZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR102RXG/preprocessing/bigWigs/ENCSR102RXG.bigWig", "name": "ENCSR102RXG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR102RXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR102RXG/chrombpnet_model_feb15_fold_1/ENCSR102RXG_w_bias.bw", "name": "ENCSR102RXG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR102RXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR102RXG/chrombpnet_model_feb15_fold_1/ENCSR102RXG_wo_bias.bw", "name": "ENCSR102RXG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR102RXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR102RXG/chrombpnet_model_feb15_fold_1/full_ENCSR102RXG.counts.bigwig", "name": "ENCSR102RXG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR102RXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR102RXG/chrombpnet_model_feb15_fold_1/full_ENCSR102RXG.profile.bigwig", "name": "ENCSR102RXG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR102RXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR373GMM/preprocessing/bigWigs/ENCSR373GMM.bigWig", "name": "ENCSR373GMM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR373GMM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373GMM/chrombpnet_model_feb15_fold_1/ENCSR373GMM_w_bias.bw", "name": "ENCSR373GMM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373GMM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373GMM/chrombpnet_model_feb15_fold_1/ENCSR373GMM_wo_bias.bw", "name": "ENCSR373GMM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373GMM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373GMM/chrombpnet_model_feb15_fold_1/full_ENCSR373GMM.counts.bigwig", "name": "ENCSR373GMM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373GMM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373GMM/chrombpnet_model_feb15_fold_1/full_ENCSR373GMM.profile.bigwig", "name": "ENCSR373GMM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373GMM" ], "assay": "ATAC", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR934AWQ/preprocessing/bigWigs/ENCSR934AWQ.bigWig", "name": "ENCSR934AWQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR934AWQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR934AWQ/chrombpnet_model_feb15_fold_1/ENCSR934AWQ_w_bias.bw", "name": "ENCSR934AWQ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR934AWQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR934AWQ/chrombpnet_model_feb15_fold_1/ENCSR934AWQ_wo_bias.bw", "name": "ENCSR934AWQ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR934AWQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR934AWQ/chrombpnet_model_feb15_fold_1/full_ENCSR934AWQ.counts.bigwig", "name": "ENCSR934AWQ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR934AWQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR934AWQ/chrombpnet_model_feb15_fold_1/full_ENCSR934AWQ.profile.bigwig", "name": "ENCSR934AWQ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR934AWQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR685OFR/preprocessing/bigWigs/ENCSR685OFR.bigWig", "name": "ENCSR685OFR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR685OFR" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR685OFR/chrombpnet_model_feb15_fold_1/ENCSR685OFR_w_bias.bw", "name": "ENCSR685OFR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR685OFR" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR685OFR/chrombpnet_model_feb15_fold_1/ENCSR685OFR_wo_bias.bw", "name": "ENCSR685OFR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR685OFR" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR685OFR/chrombpnet_model_feb15_fold_1/full_ENCSR685OFR.counts.bigwig", "name": "ENCSR685OFR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR685OFR" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR685OFR/chrombpnet_model_feb15_fold_1/full_ENCSR685OFR.profile.bigwig", "name": "ENCSR685OFR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR685OFR" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR326ESM/preprocessing/bigWigs/ENCSR326ESM.bigWig", "name": "ENCSR326ESM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR326ESM" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR326ESM/chrombpnet_model_feb15_fold_1/ENCSR326ESM_w_bias.bw", "name": "ENCSR326ESM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR326ESM" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR326ESM/chrombpnet_model_feb15_fold_1/ENCSR326ESM_wo_bias.bw", "name": "ENCSR326ESM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR326ESM" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR326ESM/chrombpnet_model_feb15_fold_1/full_ENCSR326ESM.counts.bigwig", "name": "ENCSR326ESM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR326ESM" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR326ESM/chrombpnet_model_feb15_fold_1/full_ENCSR326ESM.profile.bigwig", "name": "ENCSR326ESM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR326ESM" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR659SFK/preprocessing/bigWigs/ENCSR659SFK.bigWig", "name": "ENCSR659SFK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR659SFK" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR659SFK/chrombpnet_model_feb15_fold_1/ENCSR659SFK_w_bias.bw", "name": "ENCSR659SFK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR659SFK" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR659SFK/chrombpnet_model_feb15_fold_1/ENCSR659SFK_wo_bias.bw", "name": "ENCSR659SFK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR659SFK" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR659SFK/chrombpnet_model_feb15_fold_1/full_ENCSR659SFK.counts.bigwig", "name": "ENCSR659SFK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR659SFK" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR659SFK/chrombpnet_model_feb15_fold_1/full_ENCSR659SFK.profile.bigwig", "name": "ENCSR659SFK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR659SFK" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR335XRZ/preprocessing/bigWigs/ENCSR335XRZ.bigWig", "name": "ENCSR335XRZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR335XRZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335XRZ/chrombpnet_model_feb15_fold_1/ENCSR335XRZ_w_bias.bw", "name": "ENCSR335XRZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335XRZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335XRZ/chrombpnet_model_feb15_fold_1/ENCSR335XRZ_wo_bias.bw", "name": "ENCSR335XRZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335XRZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335XRZ/chrombpnet_model_feb15_fold_1/full_ENCSR335XRZ.counts.bigwig", "name": "ENCSR335XRZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335XRZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR335XRZ/chrombpnet_model_feb15_fold_1/full_ENCSR335XRZ.profile.bigwig", "name": "ENCSR335XRZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335XRZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR983HXF/preprocessing/bigWigs/ENCSR983HXF.bigWig", "name": "ENCSR983HXF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR983HXF" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR983HXF/chrombpnet_model_feb15_fold_1/ENCSR983HXF_w_bias.bw", "name": "ENCSR983HXF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR983HXF" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR983HXF/chrombpnet_model_feb15_fold_1/ENCSR983HXF_wo_bias.bw", "name": "ENCSR983HXF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR983HXF" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR983HXF/chrombpnet_model_feb15_fold_1/full_ENCSR983HXF.counts.bigwig", "name": "ENCSR983HXF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR983HXF" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR983HXF/chrombpnet_model_feb15_fold_1/full_ENCSR983HXF.profile.bigwig", "name": "ENCSR983HXF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR983HXF" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR803FKU/preprocessing/bigWigs/ENCSR803FKU.bigWig", "name": "ENCSR803FKU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR803FKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (38 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR803FKU/chrombpnet_model_feb15_fold_1/ENCSR803FKU_w_bias.bw", "name": "ENCSR803FKU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR803FKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (38 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR803FKU/chrombpnet_model_feb15_fold_1/ENCSR803FKU_wo_bias.bw", "name": "ENCSR803FKU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR803FKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (38 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR803FKU/chrombpnet_model_feb15_fold_1/full_ENCSR803FKU.counts.bigwig", "name": "ENCSR803FKU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR803FKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (38 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR803FKU/chrombpnet_model_feb15_fold_1/full_ENCSR803FKU.profile.bigwig", "name": "ENCSR803FKU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR803FKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens T-helper 17 cell male adult (38 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR115OIV/preprocessing/bigWigs/ENCSR115OIV.bigWig", "name": "ENCSR115OIV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR115OIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-helper 17 cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR115OIV/chrombpnet_model_feb15_fold_1/ENCSR115OIV_w_bias.bw", "name": "ENCSR115OIV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR115OIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-helper 17 cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR115OIV/chrombpnet_model_feb15_fold_1/ENCSR115OIV_wo_bias.bw", "name": "ENCSR115OIV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR115OIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-helper 17 cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR115OIV/chrombpnet_model_feb15_fold_1/full_ENCSR115OIV.counts.bigwig", "name": "ENCSR115OIV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR115OIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-helper 17 cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR115OIV/chrombpnet_model_feb15_fold_1/full_ENCSR115OIV.profile.bigwig", "name": "ENCSR115OIV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR115OIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-helper 17 cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR373NFA/preprocessing/bigWigs/ENCSR373NFA.bigWig", "name": "ENCSR373NFA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR373NFA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373NFA/chrombpnet_model_feb15_fold_1/ENCSR373NFA_w_bias.bw", "name": "ENCSR373NFA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373NFA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373NFA/chrombpnet_model_feb15_fold_1/ENCSR373NFA_wo_bias.bw", "name": "ENCSR373NFA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373NFA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373NFA/chrombpnet_model_feb15_fold_1/full_ENCSR373NFA.counts.bigwig", "name": "ENCSR373NFA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373NFA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373NFA/chrombpnet_model_feb15_fold_1/full_ENCSR373NFA.profile.bigwig", "name": "ENCSR373NFA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373NFA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR513EVP/preprocessing/bigWigs/ENCSR513EVP.bigWig", "name": "ENCSR513EVP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR513EVP" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR513EVP/chrombpnet_model_feb15_fold_1/ENCSR513EVP_w_bias.bw", "name": "ENCSR513EVP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR513EVP" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR513EVP/chrombpnet_model_feb15_fold_1/ENCSR513EVP_wo_bias.bw", "name": "ENCSR513EVP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR513EVP" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR513EVP/chrombpnet_model_feb15_fold_1/full_ENCSR513EVP.counts.bigwig", "name": "ENCSR513EVP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR513EVP" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR513EVP/chrombpnet_model_feb15_fold_1/full_ENCSR513EVP.profile.bigwig", "name": "ENCSR513EVP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR513EVP" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR261PWP/preprocessing/bigWigs/ENCSR261PWP.bigWig", "name": "ENCSR261PWP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR261PWP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR261PWP/chrombpnet_model_feb15_fold_1/ENCSR261PWP_w_bias.bw", "name": "ENCSR261PWP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR261PWP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR261PWP/chrombpnet_model_feb15_fold_1/ENCSR261PWP_wo_bias.bw", "name": "ENCSR261PWP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR261PWP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR261PWP/chrombpnet_model_feb15_fold_1/full_ENCSR261PWP.counts.bigwig", "name": "ENCSR261PWP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR261PWP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR261PWP/chrombpnet_model_feb15_fold_1/full_ENCSR261PWP.profile.bigwig", "name": "ENCSR261PWP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR261PWP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR159GFS/preprocessing/bigWigs/ENCSR159GFS.bigWig", "name": "ENCSR159GFS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR159GFS" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR159GFS/chrombpnet_model_feb15_fold_1/ENCSR159GFS_w_bias.bw", "name": "ENCSR159GFS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR159GFS" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR159GFS/chrombpnet_model_feb15_fold_1/ENCSR159GFS_wo_bias.bw", "name": "ENCSR159GFS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR159GFS" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR159GFS/chrombpnet_model_feb15_fold_1/full_ENCSR159GFS.counts.bigwig", "name": "ENCSR159GFS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR159GFS" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR159GFS/chrombpnet_model_feb15_fold_1/full_ENCSR159GFS.profile.bigwig", "name": "ENCSR159GFS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR159GFS" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (42 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR903WVU/preprocessing/bigWigs/ENCSR903WVU.bigWig", "name": "ENCSR903WVU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR903WVU" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR903WVU/chrombpnet_model_feb15_fold_1/ENCSR903WVU_w_bias.bw", "name": "ENCSR903WVU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR903WVU" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR903WVU/chrombpnet_model_feb15_fold_1/ENCSR903WVU_wo_bias.bw", "name": "ENCSR903WVU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR903WVU" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR903WVU/chrombpnet_model_feb15_fold_1/full_ENCSR903WVU.counts.bigwig", "name": "ENCSR903WVU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR903WVU" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR903WVU/chrombpnet_model_feb15_fold_1/full_ENCSR903WVU.profile.bigwig", "name": "ENCSR903WVU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR903WVU" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR718HWW/preprocessing/bigWigs/ENCSR718HWW.bigWig", "name": "ENCSR718HWW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR718HWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR718HWW/chrombpnet_model_feb15_fold_1/ENCSR718HWW_w_bias.bw", "name": "ENCSR718HWW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR718HWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR718HWW/chrombpnet_model_feb15_fold_1/ENCSR718HWW_wo_bias.bw", "name": "ENCSR718HWW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR718HWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR718HWW/chrombpnet_model_feb15_fold_1/full_ENCSR718HWW.counts.bigwig", "name": "ENCSR718HWW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR718HWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR718HWW/chrombpnet_model_feb15_fold_1/full_ENCSR718HWW.profile.bigwig", "name": "ENCSR718HWW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR718HWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR775KMA/preprocessing/bigWigs/ENCSR775KMA.bigWig", "name": "ENCSR775KMA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR775KMA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775KMA/chrombpnet_model_feb15_fold_1/ENCSR775KMA_w_bias.bw", "name": "ENCSR775KMA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR775KMA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775KMA/chrombpnet_model_feb15_fold_1/ENCSR775KMA_wo_bias.bw", "name": "ENCSR775KMA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR775KMA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775KMA/chrombpnet_model_feb15_fold_1/full_ENCSR775KMA.counts.bigwig", "name": "ENCSR775KMA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR775KMA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775KMA/chrombpnet_model_feb15_fold_1/full_ENCSR775KMA.profile.bigwig", "name": "ENCSR775KMA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR775KMA" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR610AQP/preprocessing/bigWigs/ENCSR610AQP.bigWig", "name": "ENCSR610AQP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR610AQP" ], "assay": "ATAC", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR610AQP/chrombpnet_model_feb15_fold_1/ENCSR610AQP_w_bias.bw", "name": "ENCSR610AQP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR610AQP" ], "assay": "ATAC", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR610AQP/chrombpnet_model_feb15_fold_1/ENCSR610AQP_wo_bias.bw", "name": "ENCSR610AQP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR610AQP" ], "assay": "ATAC", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR610AQP/chrombpnet_model_feb15_fold_1/full_ENCSR610AQP.counts.bigwig", "name": "ENCSR610AQP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR610AQP" ], "assay": "ATAC", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR610AQP/chrombpnet_model_feb15_fold_1/full_ENCSR610AQP.profile.bigwig", "name": "ENCSR610AQP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR610AQP" ], "assay": "ATAC", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR213YPO/preprocessing/bigWigs/ENCSR213YPO.bigWig", "name": "ENCSR213YPO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR213YPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213YPO/chrombpnet_model_feb15_fold_1/ENCSR213YPO_w_bias.bw", "name": "ENCSR213YPO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR213YPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213YPO/chrombpnet_model_feb15_fold_1/ENCSR213YPO_wo_bias.bw", "name": "ENCSR213YPO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR213YPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213YPO/chrombpnet_model_feb15_fold_1/full_ENCSR213YPO.counts.bigwig", "name": "ENCSR213YPO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR213YPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213YPO/chrombpnet_model_feb15_fold_1/full_ENCSR213YPO.profile.bigwig", "name": "ENCSR213YPO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR213YPO" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR072UYN/preprocessing/bigWigs/ENCSR072UYN.bigWig", "name": "ENCSR072UYN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR072UYN" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female child (16 years)", "biosample term name": "sciatic nerve", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR072UYN/chrombpnet_model_feb15_fold_1/ENCSR072UYN_w_bias.bw", "name": "ENCSR072UYN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR072UYN" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female child (16 years)", "biosample term name": "sciatic nerve", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR072UYN/chrombpnet_model_feb15_fold_1/ENCSR072UYN_wo_bias.bw", "name": "ENCSR072UYN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR072UYN" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female child (16 years)", "biosample term name": "sciatic nerve", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR072UYN/chrombpnet_model_feb15_fold_1/full_ENCSR072UYN.counts.bigwig", "name": "ENCSR072UYN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR072UYN" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female child (16 years)", "biosample term name": "sciatic nerve", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR072UYN/chrombpnet_model_feb15_fold_1/full_ENCSR072UYN.profile.bigwig", "name": "ENCSR072UYN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR072UYN" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female child (16 years)", "biosample term name": "sciatic nerve", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR515CDW/preprocessing/bigWigs/ENCSR515CDW.bigWig", "name": "ENCSR515CDW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR515CDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR515CDW/chrombpnet_model_feb15_fold_1/ENCSR515CDW_w_bias.bw", "name": "ENCSR515CDW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515CDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR515CDW/chrombpnet_model_feb15_fold_1/ENCSR515CDW_wo_bias.bw", "name": "ENCSR515CDW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515CDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR515CDW/chrombpnet_model_feb15_fold_1/full_ENCSR515CDW.counts.bigwig", "name": "ENCSR515CDW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515CDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR515CDW/chrombpnet_model_feb15_fold_1/full_ENCSR515CDW.profile.bigwig", "name": "ENCSR515CDW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515CDW" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR765MXG/preprocessing/bigWigs/ENCSR765MXG.bigWig", "name": "ENCSR765MXG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR765MXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR765MXG/chrombpnet_model_feb15_fold_1/ENCSR765MXG_w_bias.bw", "name": "ENCSR765MXG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR765MXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR765MXG/chrombpnet_model_feb15_fold_1/ENCSR765MXG_wo_bias.bw", "name": "ENCSR765MXG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR765MXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR765MXG/chrombpnet_model_feb15_fold_1/full_ENCSR765MXG.counts.bigwig", "name": "ENCSR765MXG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR765MXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR765MXG/chrombpnet_model_feb15_fold_1/full_ENCSR765MXG.profile.bigwig", "name": "ENCSR765MXG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR765MXG" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR337UIU/preprocessing/bigWigs/ENCSR337UIU.bigWig", "name": "ENCSR337UIU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR337UIU" ], "assay": "ATAC", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR337UIU/chrombpnet_model_feb15_fold_1/ENCSR337UIU_w_bias.bw", "name": "ENCSR337UIU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR337UIU" ], "assay": "ATAC", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR337UIU/chrombpnet_model_feb15_fold_1/ENCSR337UIU_wo_bias.bw", "name": "ENCSR337UIU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR337UIU" ], "assay": "ATAC", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR337UIU/chrombpnet_model_feb15_fold_1/full_ENCSR337UIU.counts.bigwig", "name": "ENCSR337UIU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR337UIU" ], "assay": "ATAC", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR337UIU/chrombpnet_model_feb15_fold_1/full_ENCSR337UIU.profile.bigwig", "name": "ENCSR337UIU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR337UIU" ], "assay": "ATAC", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR761TKU/preprocessing/bigWigs/ENCSR761TKU.bigWig", "name": "ENCSR761TKU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR761TKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR761TKU/chrombpnet_model_feb15_fold_1/ENCSR761TKU_w_bias.bw", "name": "ENCSR761TKU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR761TKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR761TKU/chrombpnet_model_feb15_fold_1/ENCSR761TKU_wo_bias.bw", "name": "ENCSR761TKU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR761TKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR761TKU/chrombpnet_model_feb15_fold_1/full_ENCSR761TKU.counts.bigwig", "name": "ENCSR761TKU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR761TKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR761TKU/chrombpnet_model_feb15_fold_1/full_ENCSR761TKU.profile.bigwig", "name": "ENCSR761TKU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR761TKU" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR563ZNI/preprocessing/bigWigs/ENCSR563ZNI.bigWig", "name": "ENCSR563ZNI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR563ZNI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (61 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR563ZNI/chrombpnet_model_feb15_fold_1/ENCSR563ZNI_w_bias.bw", "name": "ENCSR563ZNI ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR563ZNI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (61 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR563ZNI/chrombpnet_model_feb15_fold_1/ENCSR563ZNI_wo_bias.bw", "name": "ENCSR563ZNI ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR563ZNI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (61 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR563ZNI/chrombpnet_model_feb15_fold_1/full_ENCSR563ZNI.counts.bigwig", "name": "ENCSR563ZNI ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR563ZNI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (61 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR563ZNI/chrombpnet_model_feb15_fold_1/full_ENCSR563ZNI.profile.bigwig", "name": "ENCSR563ZNI ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR563ZNI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (61 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR373TDL/preprocessing/bigWigs/ENCSR373TDL.bigWig", "name": "ENCSR373TDL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR373TDL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373TDL/chrombpnet_model_feb15_fold_1/ENCSR373TDL_w_bias.bw", "name": "ENCSR373TDL ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373TDL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373TDL/chrombpnet_model_feb15_fold_1/ENCSR373TDL_wo_bias.bw", "name": "ENCSR373TDL ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373TDL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373TDL/chrombpnet_model_feb15_fold_1/full_ENCSR373TDL.counts.bigwig", "name": "ENCSR373TDL ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373TDL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR373TDL/chrombpnet_model_feb15_fold_1/full_ENCSR373TDL.profile.bigwig", "name": "ENCSR373TDL ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373TDL" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR474XFV/preprocessing/bigWigs/ENCSR474XFV.bigWig", "name": "ENCSR474XFV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR474XFV" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue male adult (54 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR474XFV/chrombpnet_model_feb15_fold_1/ENCSR474XFV_w_bias.bw", "name": "ENCSR474XFV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR474XFV" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue male adult (54 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR474XFV/chrombpnet_model_feb15_fold_1/ENCSR474XFV_wo_bias.bw", "name": "ENCSR474XFV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR474XFV" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue male adult (54 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR474XFV/chrombpnet_model_feb15_fold_1/full_ENCSR474XFV.counts.bigwig", "name": "ENCSR474XFV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR474XFV" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue male adult (54 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR474XFV/chrombpnet_model_feb15_fold_1/full_ENCSR474XFV.profile.bigwig", "name": "ENCSR474XFV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR474XFV" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue male adult (54 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR999NKW/preprocessing/bigWigs/ENCSR999NKW.bigWig", "name": "ENCSR999NKW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR999NKW" ], "assay": "ATAC", "biosample summary": "Homo sapiens prostate gland tissue male adult (54 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR999NKW/chrombpnet_model_feb15_fold_1/ENCSR999NKW_w_bias.bw", "name": "ENCSR999NKW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR999NKW" ], "assay": "ATAC", "biosample summary": "Homo sapiens prostate gland tissue male adult (54 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR999NKW/chrombpnet_model_feb15_fold_1/ENCSR999NKW_wo_bias.bw", "name": "ENCSR999NKW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR999NKW" ], "assay": "ATAC", "biosample summary": "Homo sapiens prostate gland tissue male adult (54 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR999NKW/chrombpnet_model_feb15_fold_1/full_ENCSR999NKW.counts.bigwig", "name": "ENCSR999NKW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR999NKW" ], "assay": "ATAC", "biosample summary": "Homo sapiens prostate gland tissue male adult (54 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR999NKW/chrombpnet_model_feb15_fold_1/full_ENCSR999NKW.profile.bigwig", "name": "ENCSR999NKW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR999NKW" ], "assay": "ATAC", "biosample summary": "Homo sapiens prostate gland tissue male adult (54 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR851EBF/preprocessing/bigWigs/ENCSR851EBF.bigWig", "name": "ENCSR851EBF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR851EBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (53 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR851EBF/chrombpnet_model_feb15_fold_1/ENCSR851EBF_w_bias.bw", "name": "ENCSR851EBF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR851EBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (53 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR851EBF/chrombpnet_model_feb15_fold_1/ENCSR851EBF_wo_bias.bw", "name": "ENCSR851EBF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR851EBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (53 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR851EBF/chrombpnet_model_feb15_fold_1/full_ENCSR851EBF.counts.bigwig", "name": "ENCSR851EBF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR851EBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (53 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR851EBF/chrombpnet_model_feb15_fold_1/full_ENCSR851EBF.profile.bigwig", "name": "ENCSR851EBF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR851EBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (53 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR522FGI/preprocessing/bigWigs/ENCSR522FGI.bigWig", "name": "ENCSR522FGI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR522FGI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR522FGI/chrombpnet_model_feb15_fold_1/ENCSR522FGI_w_bias.bw", "name": "ENCSR522FGI ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR522FGI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR522FGI/chrombpnet_model_feb15_fold_1/ENCSR522FGI_wo_bias.bw", "name": "ENCSR522FGI ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR522FGI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR522FGI/chrombpnet_model_feb15_fold_1/full_ENCSR522FGI.counts.bigwig", "name": "ENCSR522FGI ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR522FGI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR522FGI/chrombpnet_model_feb15_fold_1/full_ENCSR522FGI.profile.bigwig", "name": "ENCSR522FGI ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR522FGI" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR490MSG/preprocessing/bigWigs/ENCSR490MSG.bigWig", "name": "ENCSR490MSG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR490MSG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR490MSG/chrombpnet_model_feb15_fold_1/ENCSR490MSG_w_bias.bw", "name": "ENCSR490MSG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR490MSG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR490MSG/chrombpnet_model_feb15_fold_1/ENCSR490MSG_wo_bias.bw", "name": "ENCSR490MSG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR490MSG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR490MSG/chrombpnet_model_feb15_fold_1/full_ENCSR490MSG.counts.bigwig", "name": "ENCSR490MSG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR490MSG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR490MSG/chrombpnet_model_feb15_fold_1/full_ENCSR490MSG.profile.bigwig", "name": "ENCSR490MSG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR490MSG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR212LYK/preprocessing/bigWigs/ENCSR212LYK.bigWig", "name": "ENCSR212LYK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR212LYK" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR212LYK/chrombpnet_model_feb15_fold_1/ENCSR212LYK_w_bias.bw", "name": "ENCSR212LYK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR212LYK" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR212LYK/chrombpnet_model_feb15_fold_1/ENCSR212LYK_wo_bias.bw", "name": "ENCSR212LYK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR212LYK" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR212LYK/chrombpnet_model_feb15_fold_1/full_ENCSR212LYK.counts.bigwig", "name": "ENCSR212LYK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR212LYK" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR212LYK/chrombpnet_model_feb15_fold_1/full_ENCSR212LYK.profile.bigwig", "name": "ENCSR212LYK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR212LYK" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR788TRR/preprocessing/bigWigs/ENCSR788TRR.bigWig", "name": "ENCSR788TRR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR788TRR" ], "assay": "ATAC", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR788TRR/chrombpnet_model_feb15_fold_1/ENCSR788TRR_w_bias.bw", "name": "ENCSR788TRR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR788TRR" ], "assay": "ATAC", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR788TRR/chrombpnet_model_feb15_fold_1/ENCSR788TRR_wo_bias.bw", "name": "ENCSR788TRR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR788TRR" ], "assay": "ATAC", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR788TRR/chrombpnet_model_feb15_fold_1/full_ENCSR788TRR.counts.bigwig", "name": "ENCSR788TRR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR788TRR" ], "assay": "ATAC", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR788TRR/chrombpnet_model_feb15_fold_1/full_ENCSR788TRR.profile.bigwig", "name": "ENCSR788TRR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR788TRR" ], "assay": "ATAC", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR386HAZ/preprocessing/bigWigs/ENCSR386HAZ.bigWig", "name": "ENCSR386HAZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR386HAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (51 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR386HAZ/chrombpnet_model_feb15_fold_1/ENCSR386HAZ_w_bias.bw", "name": "ENCSR386HAZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR386HAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (51 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR386HAZ/chrombpnet_model_feb15_fold_1/ENCSR386HAZ_wo_bias.bw", "name": "ENCSR386HAZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR386HAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (51 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR386HAZ/chrombpnet_model_feb15_fold_1/full_ENCSR386HAZ.counts.bigwig", "name": "ENCSR386HAZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR386HAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (51 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR386HAZ/chrombpnet_model_feb15_fold_1/full_ENCSR386HAZ.profile.bigwig", "name": "ENCSR386HAZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR386HAZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (51 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR540BML/preprocessing/bigWigs/ENCSR540BML.bigWig", "name": "ENCSR540BML observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR540BML" ], "assay": "ATAC", "biosample summary": "Homo sapiens subcutaneous adipose tissue tissue female adult (53 years)", "biosample term name": "subcutaneous adipose tissue", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR540BML/chrombpnet_model_feb15_fold_1/ENCSR540BML_w_bias.bw", "name": "ENCSR540BML ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR540BML" ], "assay": "ATAC", "biosample summary": "Homo sapiens subcutaneous adipose tissue tissue female adult (53 years)", "biosample term name": "subcutaneous adipose tissue", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR540BML/chrombpnet_model_feb15_fold_1/ENCSR540BML_wo_bias.bw", "name": "ENCSR540BML ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR540BML" ], "assay": "ATAC", "biosample summary": "Homo sapiens subcutaneous adipose tissue tissue female adult (53 years)", "biosample term name": "subcutaneous adipose tissue", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR540BML/chrombpnet_model_feb15_fold_1/full_ENCSR540BML.counts.bigwig", "name": "ENCSR540BML ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR540BML" ], "assay": "ATAC", "biosample summary": "Homo sapiens subcutaneous adipose tissue tissue female adult (53 years)", "biosample term name": "subcutaneous adipose tissue", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR540BML/chrombpnet_model_feb15_fold_1/full_ENCSR540BML.profile.bigwig", "name": "ENCSR540BML ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR540BML" ], "assay": "ATAC", "biosample summary": "Homo sapiens subcutaneous adipose tissue tissue female adult (53 years)", "biosample term name": "subcutaneous adipose tissue", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR017RQC/preprocessing/bigWigs/ENCSR017RQC.bigWig", "name": "ENCSR017RQC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR017RQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR017RQC/chrombpnet_model_feb15_fold_1/ENCSR017RQC_w_bias.bw", "name": "ENCSR017RQC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR017RQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR017RQC/chrombpnet_model_feb15_fold_1/ENCSR017RQC_wo_bias.bw", "name": "ENCSR017RQC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR017RQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR017RQC/chrombpnet_model_feb15_fold_1/full_ENCSR017RQC.counts.bigwig", "name": "ENCSR017RQC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR017RQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR017RQC/chrombpnet_model_feb15_fold_1/full_ENCSR017RQC.profile.bigwig", "name": "ENCSR017RQC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR017RQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR251POP/preprocessing/bigWigs/ENCSR251POP.bigWig", "name": "ENCSR251POP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR251POP" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (61 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR251POP/chrombpnet_model_feb15_fold_1/ENCSR251POP_w_bias.bw", "name": "ENCSR251POP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR251POP" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (61 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR251POP/chrombpnet_model_feb15_fold_1/ENCSR251POP_wo_bias.bw", "name": "ENCSR251POP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR251POP" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (61 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR251POP/chrombpnet_model_feb15_fold_1/full_ENCSR251POP.counts.bigwig", "name": "ENCSR251POP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR251POP" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (61 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR251POP/chrombpnet_model_feb15_fold_1/full_ENCSR251POP.profile.bigwig", "name": "ENCSR251POP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR251POP" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (61 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR689SDA/preprocessing/bigWigs/ENCSR689SDA.bigWig", "name": "ENCSR689SDA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR689SDA" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (53 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR689SDA/chrombpnet_model_feb15_fold_1/ENCSR689SDA_w_bias.bw", "name": "ENCSR689SDA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR689SDA" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (53 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR689SDA/chrombpnet_model_feb15_fold_1/ENCSR689SDA_wo_bias.bw", "name": "ENCSR689SDA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR689SDA" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (53 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR689SDA/chrombpnet_model_feb15_fold_1/full_ENCSR689SDA.counts.bigwig", "name": "ENCSR689SDA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR689SDA" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (53 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR689SDA/chrombpnet_model_feb15_fold_1/full_ENCSR689SDA.profile.bigwig", "name": "ENCSR689SDA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR689SDA" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (53 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR390SLL/preprocessing/bigWigs/ENCSR390SLL.bigWig", "name": "ENCSR390SLL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR390SLL" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (42 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR390SLL/chrombpnet_model_feb15_fold_1/ENCSR390SLL_w_bias.bw", "name": "ENCSR390SLL ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR390SLL" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (42 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR390SLL/chrombpnet_model_feb15_fold_1/ENCSR390SLL_wo_bias.bw", "name": "ENCSR390SLL ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR390SLL" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (42 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR390SLL/chrombpnet_model_feb15_fold_1/full_ENCSR390SLL.counts.bigwig", "name": "ENCSR390SLL ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR390SLL" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (42 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR390SLL/chrombpnet_model_feb15_fold_1/full_ENCSR390SLL.profile.bigwig", "name": "ENCSR390SLL ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR390SLL" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (42 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR773USD/preprocessing/bigWigs/ENCSR773USD.bigWig", "name": "ENCSR773USD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR773USD" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR773USD/chrombpnet_model_feb15_fold_1/ENCSR773USD_w_bias.bw", "name": "ENCSR773USD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR773USD" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR773USD/chrombpnet_model_feb15_fold_1/ENCSR773USD_wo_bias.bw", "name": "ENCSR773USD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR773USD" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR773USD/chrombpnet_model_feb15_fold_1/full_ENCSR773USD.counts.bigwig", "name": "ENCSR773USD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR773USD" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR773USD/chrombpnet_model_feb15_fold_1/full_ENCSR773USD.profile.bigwig", "name": "ENCSR773USD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR773USD" ], "assay": "ATAC", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR227FVE/preprocessing/bigWigs/ENCSR227FVE.bigWig", "name": "ENCSR227FVE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR227FVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR227FVE/chrombpnet_model_feb15_fold_1/ENCSR227FVE_w_bias.bw", "name": "ENCSR227FVE ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR227FVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR227FVE/chrombpnet_model_feb15_fold_1/ENCSR227FVE_wo_bias.bw", "name": "ENCSR227FVE ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR227FVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR227FVE/chrombpnet_model_feb15_fold_1/full_ENCSR227FVE.counts.bigwig", "name": "ENCSR227FVE ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR227FVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR227FVE/chrombpnet_model_feb15_fold_1/full_ENCSR227FVE.profile.bigwig", "name": "ENCSR227FVE ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR227FVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR053SGP/preprocessing/bigWigs/ENCSR053SGP.bigWig", "name": "ENCSR053SGP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR053SGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (54 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR053SGP/chrombpnet_model_feb15_fold_1/ENCSR053SGP_w_bias.bw", "name": "ENCSR053SGP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR053SGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (54 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR053SGP/chrombpnet_model_feb15_fold_1/ENCSR053SGP_wo_bias.bw", "name": "ENCSR053SGP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR053SGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (54 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR053SGP/chrombpnet_model_feb15_fold_1/full_ENCSR053SGP.counts.bigwig", "name": "ENCSR053SGP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR053SGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (54 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR053SGP/chrombpnet_model_feb15_fold_1/full_ENCSR053SGP.profile.bigwig", "name": "ENCSR053SGP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR053SGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (54 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR355SGJ/preprocessing/bigWigs/ENCSR355SGJ.bigWig", "name": "ENCSR355SGJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR355SGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (51 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR355SGJ/chrombpnet_model_feb15_fold_1/ENCSR355SGJ_w_bias.bw", "name": "ENCSR355SGJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR355SGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (51 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR355SGJ/chrombpnet_model_feb15_fold_1/ENCSR355SGJ_wo_bias.bw", "name": "ENCSR355SGJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR355SGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (51 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR355SGJ/chrombpnet_model_feb15_fold_1/full_ENCSR355SGJ.counts.bigwig", "name": "ENCSR355SGJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR355SGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (51 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR355SGJ/chrombpnet_model_feb15_fold_1/full_ENCSR355SGJ.profile.bigwig", "name": "ENCSR355SGJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR355SGJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (51 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR890DWH/preprocessing/bigWigs/ENCSR890DWH.bigWig", "name": "ENCSR890DWH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR890DWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (41 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR890DWH/chrombpnet_model_feb15_fold_1/ENCSR890DWH_w_bias.bw", "name": "ENCSR890DWH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR890DWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (41 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR890DWH/chrombpnet_model_feb15_fold_1/ENCSR890DWH_wo_bias.bw", "name": "ENCSR890DWH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR890DWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (41 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR890DWH/chrombpnet_model_feb15_fold_1/full_ENCSR890DWH.counts.bigwig", "name": "ENCSR890DWH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR890DWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (41 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR890DWH/chrombpnet_model_feb15_fold_1/full_ENCSR890DWH.profile.bigwig", "name": "ENCSR890DWH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR890DWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (41 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR310RJN/preprocessing/bigWigs/ENCSR310RJN.bigWig", "name": "ENCSR310RJN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR310RJN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310RJN/chrombpnet_model_feb15_fold_1/ENCSR310RJN_w_bias.bw", "name": "ENCSR310RJN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR310RJN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310RJN/chrombpnet_model_feb15_fold_1/ENCSR310RJN_wo_bias.bw", "name": "ENCSR310RJN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR310RJN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310RJN/chrombpnet_model_feb15_fold_1/full_ENCSR310RJN.counts.bigwig", "name": "ENCSR310RJN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR310RJN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR310RJN/chrombpnet_model_feb15_fold_1/full_ENCSR310RJN.profile.bigwig", "name": "ENCSR310RJN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR310RJN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR392UJM/preprocessing/bigWigs/ENCSR392UJM.bigWig", "name": "ENCSR392UJM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR392UJM" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392UJM/chrombpnet_model_feb15_fold_1/ENCSR392UJM_w_bias.bw", "name": "ENCSR392UJM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR392UJM" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392UJM/chrombpnet_model_feb15_fold_1/ENCSR392UJM_wo_bias.bw", "name": "ENCSR392UJM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR392UJM" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392UJM/chrombpnet_model_feb15_fold_1/full_ENCSR392UJM.counts.bigwig", "name": "ENCSR392UJM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR392UJM" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392UJM/chrombpnet_model_feb15_fold_1/full_ENCSR392UJM.profile.bigwig", "name": "ENCSR392UJM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR392UJM" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR437OOJ/preprocessing/bigWigs/ENCSR437OOJ.bigWig", "name": "ENCSR437OOJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR437OOJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (59 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR437OOJ/chrombpnet_model_feb15_fold_1/ENCSR437OOJ_w_bias.bw", "name": "ENCSR437OOJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR437OOJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (59 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR437OOJ/chrombpnet_model_feb15_fold_1/ENCSR437OOJ_wo_bias.bw", "name": "ENCSR437OOJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR437OOJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (59 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR437OOJ/chrombpnet_model_feb15_fold_1/full_ENCSR437OOJ.counts.bigwig", "name": "ENCSR437OOJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR437OOJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (59 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR437OOJ/chrombpnet_model_feb15_fold_1/full_ENCSR437OOJ.profile.bigwig", "name": "ENCSR437OOJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR437OOJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (59 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR802GEV/preprocessing/bigWigs/ENCSR802GEV.bigWig", "name": "ENCSR802GEV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR802GEV" ], "assay": "ATAC", "biosample summary": "Homo sapiens cerebellum tissue male adult (20 years)", "biosample term name": "cerebellum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR802GEV/chrombpnet_model_feb15_fold_1/ENCSR802GEV_w_bias.bw", "name": "ENCSR802GEV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802GEV" ], "assay": "ATAC", "biosample summary": "Homo sapiens cerebellum tissue male adult (20 years)", "biosample term name": "cerebellum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR802GEV/chrombpnet_model_feb15_fold_1/ENCSR802GEV_wo_bias.bw", "name": "ENCSR802GEV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802GEV" ], "assay": "ATAC", "biosample summary": "Homo sapiens cerebellum tissue male adult (20 years)", "biosample term name": "cerebellum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR802GEV/chrombpnet_model_feb15_fold_1/full_ENCSR802GEV.counts.bigwig", "name": "ENCSR802GEV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802GEV" ], "assay": "ATAC", "biosample summary": "Homo sapiens cerebellum tissue male adult (20 years)", "biosample term name": "cerebellum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR802GEV/chrombpnet_model_feb15_fold_1/full_ENCSR802GEV.profile.bigwig", "name": "ENCSR802GEV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802GEV" ], "assay": "ATAC", "biosample summary": "Homo sapiens cerebellum tissue male adult (20 years)", "biosample term name": "cerebellum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR153IUB/preprocessing/bigWigs/ENCSR153IUB.bigWig", "name": "ENCSR153IUB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR153IUB" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue male adult (26 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR153IUB/chrombpnet_model_feb15_fold_1/ENCSR153IUB_w_bias.bw", "name": "ENCSR153IUB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR153IUB" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue male adult (26 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR153IUB/chrombpnet_model_feb15_fold_1/ENCSR153IUB_wo_bias.bw", "name": "ENCSR153IUB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR153IUB" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue male adult (26 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR153IUB/chrombpnet_model_feb15_fold_1/full_ENCSR153IUB.counts.bigwig", "name": "ENCSR153IUB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR153IUB" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue male adult (26 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR153IUB/chrombpnet_model_feb15_fold_1/full_ENCSR153IUB.profile.bigwig", "name": "ENCSR153IUB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR153IUB" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue male adult (26 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR040DJK/preprocessing/bigWigs/ENCSR040DJK.bigWig", "name": "ENCSR040DJK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR040DJK" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR040DJK/chrombpnet_model_feb15_fold_1/ENCSR040DJK_w_bias.bw", "name": "ENCSR040DJK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR040DJK" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR040DJK/chrombpnet_model_feb15_fold_1/ENCSR040DJK_wo_bias.bw", "name": "ENCSR040DJK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR040DJK" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR040DJK/chrombpnet_model_feb15_fold_1/full_ENCSR040DJK.counts.bigwig", "name": "ENCSR040DJK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR040DJK" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR040DJK/chrombpnet_model_feb15_fold_1/full_ENCSR040DJK.profile.bigwig", "name": "ENCSR040DJK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR040DJK" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR731ODJ/preprocessing/bigWigs/ENCSR731ODJ.bigWig", "name": "ENCSR731ODJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR731ODJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (58 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR731ODJ/chrombpnet_model_feb15_fold_1/ENCSR731ODJ_w_bias.bw", "name": "ENCSR731ODJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR731ODJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (58 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR731ODJ/chrombpnet_model_feb15_fold_1/ENCSR731ODJ_wo_bias.bw", "name": "ENCSR731ODJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR731ODJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (58 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR731ODJ/chrombpnet_model_feb15_fold_1/full_ENCSR731ODJ.counts.bigwig", "name": "ENCSR731ODJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR731ODJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (58 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR731ODJ/chrombpnet_model_feb15_fold_1/full_ENCSR731ODJ.profile.bigwig", "name": "ENCSR731ODJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR731ODJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (58 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR548QCP/preprocessing/bigWigs/ENCSR548QCP.bigWig", "name": "ENCSR548QCP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR548QCP" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (37 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548QCP/chrombpnet_model_feb15_fold_1/ENCSR548QCP_w_bias.bw", "name": "ENCSR548QCP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548QCP" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (37 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548QCP/chrombpnet_model_feb15_fold_1/ENCSR548QCP_wo_bias.bw", "name": "ENCSR548QCP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548QCP" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (37 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548QCP/chrombpnet_model_feb15_fold_1/full_ENCSR548QCP.counts.bigwig", "name": "ENCSR548QCP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548QCP" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (37 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548QCP/chrombpnet_model_feb15_fold_1/full_ENCSR548QCP.profile.bigwig", "name": "ENCSR548QCP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548QCP" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (37 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR710SMN/preprocessing/bigWigs/ENCSR710SMN.bigWig", "name": "ENCSR710SMN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR710SMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (58 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR710SMN/chrombpnet_model_feb15_fold_1/ENCSR710SMN_w_bias.bw", "name": "ENCSR710SMN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR710SMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (58 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR710SMN/chrombpnet_model_feb15_fold_1/ENCSR710SMN_wo_bias.bw", "name": "ENCSR710SMN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR710SMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (58 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR710SMN/chrombpnet_model_feb15_fold_1/full_ENCSR710SMN.counts.bigwig", "name": "ENCSR710SMN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR710SMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (58 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR710SMN/chrombpnet_model_feb15_fold_1/full_ENCSR710SMN.profile.bigwig", "name": "ENCSR710SMN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR710SMN" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (58 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR414DVK/preprocessing/bigWigs/ENCSR414DVK.bigWig", "name": "ENCSR414DVK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR414DVK" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR414DVK/chrombpnet_model_feb15_fold_1/ENCSR414DVK_w_bias.bw", "name": "ENCSR414DVK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR414DVK" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR414DVK/chrombpnet_model_feb15_fold_1/ENCSR414DVK_wo_bias.bw", "name": "ENCSR414DVK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR414DVK" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR414DVK/chrombpnet_model_feb15_fold_1/full_ENCSR414DVK.counts.bigwig", "name": "ENCSR414DVK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR414DVK" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR414DVK/chrombpnet_model_feb15_fold_1/full_ENCSR414DVK.profile.bigwig", "name": "ENCSR414DVK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR414DVK" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR133CMC/preprocessing/bigWigs/ENCSR133CMC.bigWig", "name": "ENCSR133CMC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR133CMC" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133CMC/chrombpnet_model_feb15_fold_1/ENCSR133CMC_w_bias.bw", "name": "ENCSR133CMC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133CMC" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133CMC/chrombpnet_model_feb15_fold_1/ENCSR133CMC_wo_bias.bw", "name": "ENCSR133CMC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133CMC" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133CMC/chrombpnet_model_feb15_fold_1/full_ENCSR133CMC.counts.bigwig", "name": "ENCSR133CMC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133CMC" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR133CMC/chrombpnet_model_feb15_fold_1/full_ENCSR133CMC.profile.bigwig", "name": "ENCSR133CMC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133CMC" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR705KEB/preprocessing/bigWigs/ENCSR705KEB.bigWig", "name": "ENCSR705KEB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR705KEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705KEB/chrombpnet_model_feb15_fold_1/ENCSR705KEB_w_bias.bw", "name": "ENCSR705KEB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR705KEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705KEB/chrombpnet_model_feb15_fold_1/ENCSR705KEB_wo_bias.bw", "name": "ENCSR705KEB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR705KEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705KEB/chrombpnet_model_feb15_fold_1/full_ENCSR705KEB.counts.bigwig", "name": "ENCSR705KEB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR705KEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705KEB/chrombpnet_model_feb15_fold_1/full_ENCSR705KEB.profile.bigwig", "name": "ENCSR705KEB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR705KEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR260ZIV/preprocessing/bigWigs/ENCSR260ZIV.bigWig", "name": "ENCSR260ZIV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR260ZIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastroesophageal sphincter tissue female adult (51 years)", "biosample term name": "gastroesophageal sphincter", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260ZIV/chrombpnet_model_feb15_fold_1/ENCSR260ZIV_w_bias.bw", "name": "ENCSR260ZIV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR260ZIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastroesophageal sphincter tissue female adult (51 years)", "biosample term name": "gastroesophageal sphincter", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260ZIV/chrombpnet_model_feb15_fold_1/ENCSR260ZIV_wo_bias.bw", "name": "ENCSR260ZIV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR260ZIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastroesophageal sphincter tissue female adult (51 years)", "biosample term name": "gastroesophageal sphincter", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260ZIV/chrombpnet_model_feb15_fold_1/full_ENCSR260ZIV.counts.bigwig", "name": "ENCSR260ZIV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR260ZIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastroesophageal sphincter tissue female adult (51 years)", "biosample term name": "gastroesophageal sphincter", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260ZIV/chrombpnet_model_feb15_fold_1/full_ENCSR260ZIV.profile.bigwig", "name": "ENCSR260ZIV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR260ZIV" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastroesophageal sphincter tissue female adult (51 years)", "biosample term name": "gastroesophageal sphincter", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR117PYB/preprocessing/bigWigs/ENCSR117PYB.bigWig", "name": "ENCSR117PYB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR117PYB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (51 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR117PYB/chrombpnet_model_feb15_fold_1/ENCSR117PYB_w_bias.bw", "name": "ENCSR117PYB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR117PYB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (51 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR117PYB/chrombpnet_model_feb15_fold_1/ENCSR117PYB_wo_bias.bw", "name": "ENCSR117PYB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR117PYB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (51 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR117PYB/chrombpnet_model_feb15_fold_1/full_ENCSR117PYB.counts.bigwig", "name": "ENCSR117PYB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR117PYB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (51 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR117PYB/chrombpnet_model_feb15_fold_1/full_ENCSR117PYB.profile.bigwig", "name": "ENCSR117PYB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR117PYB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (51 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR609GST/preprocessing/bigWigs/ENCSR609GST.bigWig", "name": "ENCSR609GST observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR609GST" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)", "biosample term name": "esophagus muscularis mucosa", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR609GST/chrombpnet_model_feb15_fold_1/ENCSR609GST_w_bias.bw", "name": "ENCSR609GST ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR609GST" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)", "biosample term name": "esophagus muscularis mucosa", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR609GST/chrombpnet_model_feb15_fold_1/ENCSR609GST_wo_bias.bw", "name": "ENCSR609GST ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR609GST" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)", "biosample term name": "esophagus muscularis mucosa", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR609GST/chrombpnet_model_feb15_fold_1/full_ENCSR609GST.counts.bigwig", "name": "ENCSR609GST ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR609GST" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)", "biosample term name": "esophagus muscularis mucosa", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR609GST/chrombpnet_model_feb15_fold_1/full_ENCSR609GST.profile.bigwig", "name": "ENCSR609GST ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR609GST" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)", "biosample term name": "esophagus muscularis mucosa", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR996ZCR/preprocessing/bigWigs/ENCSR996ZCR.bigWig", "name": "ENCSR996ZCR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR996ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR996ZCR/chrombpnet_model_feb15_fold_1/ENCSR996ZCR_w_bias.bw", "name": "ENCSR996ZCR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR996ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR996ZCR/chrombpnet_model_feb15_fold_1/ENCSR996ZCR_wo_bias.bw", "name": "ENCSR996ZCR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR996ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR996ZCR/chrombpnet_model_feb15_fold_1/full_ENCSR996ZCR.counts.bigwig", "name": "ENCSR996ZCR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR996ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR996ZCR/chrombpnet_model_feb15_fold_1/full_ENCSR996ZCR.profile.bigwig", "name": "ENCSR996ZCR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR996ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR096BPX/preprocessing/bigWigs/ENCSR096BPX.bigWig", "name": "ENCSR096BPX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR096BPX" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus squamous epithelium tissue female adult (51 years)", "biosample term name": "esophagus squamous epithelium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096BPX/chrombpnet_model_feb15_fold_1/ENCSR096BPX_w_bias.bw", "name": "ENCSR096BPX ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR096BPX" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus squamous epithelium tissue female adult (51 years)", "biosample term name": "esophagus squamous epithelium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096BPX/chrombpnet_model_feb15_fold_1/ENCSR096BPX_wo_bias.bw", "name": "ENCSR096BPX ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR096BPX" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus squamous epithelium tissue female adult (51 years)", "biosample term name": "esophagus squamous epithelium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096BPX/chrombpnet_model_feb15_fold_1/full_ENCSR096BPX.counts.bigwig", "name": "ENCSR096BPX ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR096BPX" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus squamous epithelium tissue female adult (51 years)", "biosample term name": "esophagus squamous epithelium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096BPX/chrombpnet_model_feb15_fold_1/full_ENCSR096BPX.profile.bigwig", "name": "ENCSR096BPX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR096BPX" ], "assay": "ATAC", "biosample summary": "Homo sapiens esophagus squamous epithelium tissue female adult (51 years)", "biosample term name": "esophagus squamous epithelium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR584AXZ/preprocessing/bigWigs/ENCSR584AXZ.bigWig", "name": "ENCSR584AXZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR584AXZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens coronary artery tissue female adult (51 years)", "biosample term name": "coronary artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR584AXZ/chrombpnet_model_feb15_fold_1/ENCSR584AXZ_w_bias.bw", "name": "ENCSR584AXZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR584AXZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens coronary artery tissue female adult (51 years)", "biosample term name": "coronary artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR584AXZ/chrombpnet_model_feb15_fold_1/ENCSR584AXZ_wo_bias.bw", "name": "ENCSR584AXZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR584AXZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens coronary artery tissue female adult (51 years)", "biosample term name": "coronary artery", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR584AXZ/chrombpnet_model_feb15_fold_1/full_ENCSR584AXZ.counts.bigwig", "name": "ENCSR584AXZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR584AXZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens coronary artery tissue female adult (51 years)", "biosample term name": "coronary artery", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR584AXZ/chrombpnet_model_feb15_fold_1/full_ENCSR584AXZ.profile.bigwig", "name": "ENCSR584AXZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR584AXZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens coronary artery tissue female adult (51 years)", "biosample term name": "coronary artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR548KIL/preprocessing/bigWigs/ENCSR548KIL.bigWig", "name": "ENCSR548KIL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR548KIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548KIL/chrombpnet_model_feb15_fold_1/ENCSR548KIL_w_bias.bw", "name": "ENCSR548KIL ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548KIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548KIL/chrombpnet_model_feb15_fold_1/ENCSR548KIL_wo_bias.bw", "name": "ENCSR548KIL ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548KIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548KIL/chrombpnet_model_feb15_fold_1/full_ENCSR548KIL.counts.bigwig", "name": "ENCSR548KIL ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548KIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548KIL/chrombpnet_model_feb15_fold_1/full_ENCSR548KIL.profile.bigwig", "name": "ENCSR548KIL ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548KIL" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR120MOY/preprocessing/bigWigs/ENCSR120MOY.bigWig", "name": "ENCSR120MOY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR120MOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue male adult (26 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR120MOY/chrombpnet_model_feb15_fold_1/ENCSR120MOY_w_bias.bw", "name": "ENCSR120MOY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR120MOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue male adult (26 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR120MOY/chrombpnet_model_feb15_fold_1/ENCSR120MOY_wo_bias.bw", "name": "ENCSR120MOY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR120MOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue male adult (26 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR120MOY/chrombpnet_model_feb15_fold_1/full_ENCSR120MOY.counts.bigwig", "name": "ENCSR120MOY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR120MOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue male adult (26 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR120MOY/chrombpnet_model_feb15_fold_1/full_ENCSR120MOY.profile.bigwig", "name": "ENCSR120MOY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR120MOY" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue male adult (26 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR846VPV/preprocessing/bigWigs/ENCSR846VPV.bigWig", "name": "ENCSR846VPV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR846VPV" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VPV/chrombpnet_model_feb15_fold_1/ENCSR846VPV_w_bias.bw", "name": "ENCSR846VPV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846VPV" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VPV/chrombpnet_model_feb15_fold_1/ENCSR846VPV_wo_bias.bw", "name": "ENCSR846VPV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846VPV" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VPV/chrombpnet_model_feb15_fold_1/full_ENCSR846VPV.counts.bigwig", "name": "ENCSR846VPV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846VPV" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VPV/chrombpnet_model_feb15_fold_1/full_ENCSR846VPV.profile.bigwig", "name": "ENCSR846VPV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846VPV" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR552QUA/preprocessing/bigWigs/ENCSR552QUA.bigWig", "name": "ENCSR552QUA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR552QUA" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR552QUA/chrombpnet_model_feb15_fold_1/ENCSR552QUA_w_bias.bw", "name": "ENCSR552QUA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552QUA" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR552QUA/chrombpnet_model_feb15_fold_1/ENCSR552QUA_wo_bias.bw", "name": "ENCSR552QUA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552QUA" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR552QUA/chrombpnet_model_feb15_fold_1/full_ENCSR552QUA.counts.bigwig", "name": "ENCSR552QUA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552QUA" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR552QUA/chrombpnet_model_feb15_fold_1/full_ENCSR552QUA.profile.bigwig", "name": "ENCSR552QUA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552QUA" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR846VLJ/preprocessing/bigWigs/ENCSR846VLJ.bigWig", "name": "ENCSR846VLJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR846VLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VLJ/chrombpnet_model_feb15_fold_1/ENCSR846VLJ_w_bias.bw", "name": "ENCSR846VLJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846VLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VLJ/chrombpnet_model_feb15_fold_1/ENCSR846VLJ_wo_bias.bw", "name": "ENCSR846VLJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846VLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VLJ/chrombpnet_model_feb15_fold_1/full_ENCSR846VLJ.counts.bigwig", "name": "ENCSR846VLJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846VLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846VLJ/chrombpnet_model_feb15_fold_1/full_ENCSR846VLJ.profile.bigwig", "name": "ENCSR846VLJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846VLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR452OSK/preprocessing/bigWigs/ENCSR452OSK.bigWig", "name": "ENCSR452OSK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR452OSK" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (40 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452OSK/chrombpnet_model_feb15_fold_1/ENCSR452OSK_w_bias.bw", "name": "ENCSR452OSK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452OSK" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (40 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452OSK/chrombpnet_model_feb15_fold_1/ENCSR452OSK_wo_bias.bw", "name": "ENCSR452OSK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452OSK" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (40 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452OSK/chrombpnet_model_feb15_fold_1/full_ENCSR452OSK.counts.bigwig", "name": "ENCSR452OSK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452OSK" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (40 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR452OSK/chrombpnet_model_feb15_fold_1/full_ENCSR452OSK.profile.bigwig", "name": "ENCSR452OSK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452OSK" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (40 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR846ZBX/preprocessing/bigWigs/ENCSR846ZBX.bigWig", "name": "ENCSR846ZBX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR846ZBX" ], "assay": "ATAC", "biosample summary": "Homo sapiens breast epithelium tissue female adult (51 years)", "biosample term name": "breast epithelium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846ZBX/chrombpnet_model_feb15_fold_1/ENCSR846ZBX_w_bias.bw", "name": "ENCSR846ZBX ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846ZBX" ], "assay": "ATAC", "biosample summary": "Homo sapiens breast epithelium tissue female adult (51 years)", "biosample term name": "breast epithelium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846ZBX/chrombpnet_model_feb15_fold_1/ENCSR846ZBX_wo_bias.bw", "name": "ENCSR846ZBX ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846ZBX" ], "assay": "ATAC", "biosample summary": "Homo sapiens breast epithelium tissue female adult (51 years)", "biosample term name": "breast epithelium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846ZBX/chrombpnet_model_feb15_fold_1/full_ENCSR846ZBX.counts.bigwig", "name": "ENCSR846ZBX ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846ZBX" ], "assay": "ATAC", "biosample summary": "Homo sapiens breast epithelium tissue female adult (51 years)", "biosample term name": "breast epithelium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR846ZBX/chrombpnet_model_feb15_fold_1/full_ENCSR846ZBX.profile.bigwig", "name": "ENCSR846ZBX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846ZBX" ], "assay": "ATAC", "biosample summary": "Homo sapiens breast epithelium tissue female adult (51 years)", "biosample term name": "breast epithelium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR948MQC/preprocessing/bigWigs/ENCSR948MQC.bigWig", "name": "ENCSR948MQC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR948MQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of right lung tissue female adult (65 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR948MQC/chrombpnet_model_feb15_fold_1/ENCSR948MQC_w_bias.bw", "name": "ENCSR948MQC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR948MQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of right lung tissue female adult (65 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR948MQC/chrombpnet_model_feb15_fold_1/ENCSR948MQC_wo_bias.bw", "name": "ENCSR948MQC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR948MQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of right lung tissue female adult (65 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR948MQC/chrombpnet_model_feb15_fold_1/full_ENCSR948MQC.counts.bigwig", "name": "ENCSR948MQC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR948MQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of right lung tissue female adult (65 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR948MQC/chrombpnet_model_feb15_fold_1/full_ENCSR948MQC.profile.bigwig", "name": "ENCSR948MQC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR948MQC" ], "assay": "ATAC", "biosample summary": "Homo sapiens lower lobe of right lung tissue female adult (65 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR201FIW/preprocessing/bigWigs/ENCSR201FIW.bigWig", "name": "ENCSR201FIW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR201FIW" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR201FIW/chrombpnet_model_feb15_fold_1/ENCSR201FIW_w_bias.bw", "name": "ENCSR201FIW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR201FIW" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR201FIW/chrombpnet_model_feb15_fold_1/ENCSR201FIW_wo_bias.bw", "name": "ENCSR201FIW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR201FIW" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR201FIW/chrombpnet_model_feb15_fold_1/full_ENCSR201FIW.counts.bigwig", "name": "ENCSR201FIW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR201FIW" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR201FIW/chrombpnet_model_feb15_fold_1/full_ENCSR201FIW.profile.bigwig", "name": "ENCSR201FIW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR201FIW" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR775SYU/preprocessing/bigWigs/ENCSR775SYU.bigWig", "name": "ENCSR775SYU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR775SYU" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775SYU/chrombpnet_model_feb15_fold_1/ENCSR775SYU_w_bias.bw", "name": "ENCSR775SYU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR775SYU" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775SYU/chrombpnet_model_feb15_fold_1/ENCSR775SYU_wo_bias.bw", "name": "ENCSR775SYU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR775SYU" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775SYU/chrombpnet_model_feb15_fold_1/full_ENCSR775SYU.counts.bigwig", "name": "ENCSR775SYU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR775SYU" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR775SYU/chrombpnet_model_feb15_fold_1/full_ENCSR775SYU.profile.bigwig", "name": "ENCSR775SYU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR775SYU" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR607BTF/preprocessing/bigWigs/ENCSR607BTF.bigWig", "name": "ENCSR607BTF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR607BTF" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR607BTF/chrombpnet_model_feb15_fold_1/ENCSR607BTF_w_bias.bw", "name": "ENCSR607BTF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR607BTF" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR607BTF/chrombpnet_model_feb15_fold_1/ENCSR607BTF_wo_bias.bw", "name": "ENCSR607BTF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR607BTF" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR607BTF/chrombpnet_model_feb15_fold_1/full_ENCSR607BTF.counts.bigwig", "name": "ENCSR607BTF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR607BTF" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR607BTF/chrombpnet_model_feb15_fold_1/full_ENCSR607BTF.profile.bigwig", "name": "ENCSR607BTF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR607BTF" ], "assay": "ATAC", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR404LLJ/preprocessing/bigWigs/ENCSR404LLJ.bigWig", "name": "ENCSR404LLJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR404LLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (53 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR404LLJ/chrombpnet_model_feb15_fold_1/ENCSR404LLJ_w_bias.bw", "name": "ENCSR404LLJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR404LLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (53 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR404LLJ/chrombpnet_model_feb15_fold_1/ENCSR404LLJ_wo_bias.bw", "name": "ENCSR404LLJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR404LLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (53 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR404LLJ/chrombpnet_model_feb15_fold_1/full_ENCSR404LLJ.counts.bigwig", "name": "ENCSR404LLJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR404LLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (53 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR404LLJ/chrombpnet_model_feb15_fold_1/full_ENCSR404LLJ.profile.bigwig", "name": "ENCSR404LLJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR404LLJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens transverse colon tissue female adult (53 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR630REB/preprocessing/bigWigs/ENCSR630REB.bigWig", "name": "ENCSR630REB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR630REB" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial artery tissue male adult (54 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR630REB/chrombpnet_model_feb15_fold_1/ENCSR630REB_w_bias.bw", "name": "ENCSR630REB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR630REB" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial artery tissue male adult (54 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR630REB/chrombpnet_model_feb15_fold_1/ENCSR630REB_wo_bias.bw", "name": "ENCSR630REB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR630REB" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial artery tissue male adult (54 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR630REB/chrombpnet_model_feb15_fold_1/full_ENCSR630REB.counts.bigwig", "name": "ENCSR630REB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR630REB" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial artery tissue male adult (54 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR630REB/chrombpnet_model_feb15_fold_1/full_ENCSR630REB.profile.bigwig", "name": "ENCSR630REB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR630REB" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial artery tissue male adult (54 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR914DTI/preprocessing/bigWigs/ENCSR914DTI.bigWig", "name": "ENCSR914DTI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR914DTI" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR914DTI/chrombpnet_model_feb15_fold_1/ENCSR914DTI_w_bias.bw", "name": "ENCSR914DTI ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR914DTI" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR914DTI/chrombpnet_model_feb15_fold_1/ENCSR914DTI_wo_bias.bw", "name": "ENCSR914DTI ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR914DTI" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR914DTI/chrombpnet_model_feb15_fold_1/full_ENCSR914DTI.counts.bigwig", "name": "ENCSR914DTI ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR914DTI" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR914DTI/chrombpnet_model_feb15_fold_1/full_ENCSR914DTI.profile.bigwig", "name": "ENCSR914DTI ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR914DTI" ], "assay": "ATAC", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR344ZTM/preprocessing/bigWigs/ENCSR344ZTM.bigWig", "name": "ENCSR344ZTM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR344ZTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (54 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR344ZTM/chrombpnet_model_feb15_fold_1/ENCSR344ZTM_w_bias.bw", "name": "ENCSR344ZTM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR344ZTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (54 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR344ZTM/chrombpnet_model_feb15_fold_1/ENCSR344ZTM_wo_bias.bw", "name": "ENCSR344ZTM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR344ZTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (54 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR344ZTM/chrombpnet_model_feb15_fold_1/full_ENCSR344ZTM.counts.bigwig", "name": "ENCSR344ZTM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR344ZTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (54 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR344ZTM/chrombpnet_model_feb15_fold_1/full_ENCSR344ZTM.profile.bigwig", "name": "ENCSR344ZTM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR344ZTM" ], "assay": "ATAC", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (54 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR918TVE/preprocessing/bigWigs/ENCSR918TVE.bigWig", "name": "ENCSR918TVE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR918TVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR918TVE/chrombpnet_model_feb15_fold_1/ENCSR918TVE_w_bias.bw", "name": "ENCSR918TVE ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR918TVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR918TVE/chrombpnet_model_feb15_fold_1/ENCSR918TVE_wo_bias.bw", "name": "ENCSR918TVE ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR918TVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR918TVE/chrombpnet_model_feb15_fold_1/full_ENCSR918TVE.counts.bigwig", "name": "ENCSR918TVE ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR918TVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR918TVE/chrombpnet_model_feb15_fold_1/full_ENCSR918TVE.profile.bigwig", "name": "ENCSR918TVE ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR918TVE" ], "assay": "ATAC", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR078EBD/preprocessing/bigWigs/ENCSR078EBD.bigWig", "name": "ENCSR078EBD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR078EBD" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (51 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR078EBD/chrombpnet_model_feb15_fold_1/ENCSR078EBD_w_bias.bw", "name": "ENCSR078EBD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR078EBD" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (51 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR078EBD/chrombpnet_model_feb15_fold_1/ENCSR078EBD_wo_bias.bw", "name": "ENCSR078EBD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR078EBD" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (51 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR078EBD/chrombpnet_model_feb15_fold_1/full_ENCSR078EBD.counts.bigwig", "name": "ENCSR078EBD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR078EBD" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (51 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR078EBD/chrombpnet_model_feb15_fold_1/full_ENCSR078EBD.profile.bigwig", "name": "ENCSR078EBD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR078EBD" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (51 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR439TZT/preprocessing/bigWigs/ENCSR439TZT.bigWig", "name": "ENCSR439TZT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR439TZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR439TZT/chrombpnet_model_feb15_fold_1/ENCSR439TZT_w_bias.bw", "name": "ENCSR439TZT ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR439TZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR439TZT/chrombpnet_model_feb15_fold_1/ENCSR439TZT_wo_bias.bw", "name": "ENCSR439TZT ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR439TZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR439TZT/chrombpnet_model_feb15_fold_1/full_ENCSR439TZT.counts.bigwig", "name": "ENCSR439TZT ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR439TZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR439TZT/chrombpnet_model_feb15_fold_1/full_ENCSR439TZT.profile.bigwig", "name": "ENCSR439TZT ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR439TZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR204SMO/preprocessing/bigWigs/ENCSR204SMO.bigWig", "name": "ENCSR204SMO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR204SMO" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204SMO/chrombpnet_model_feb15_fold_1/ENCSR204SMO_w_bias.bw", "name": "ENCSR204SMO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR204SMO" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204SMO/chrombpnet_model_feb15_fold_1/ENCSR204SMO_wo_bias.bw", "name": "ENCSR204SMO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR204SMO" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204SMO/chrombpnet_model_feb15_fold_1/full_ENCSR204SMO.counts.bigwig", "name": "ENCSR204SMO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR204SMO" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204SMO/chrombpnet_model_feb15_fold_1/full_ENCSR204SMO.profile.bigwig", "name": "ENCSR204SMO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR204SMO" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR823ZCR/preprocessing/bigWigs/ENCSR823ZCR.bigWig", "name": "ENCSR823ZCR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR823ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (51 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR823ZCR/chrombpnet_model_feb15_fold_1/ENCSR823ZCR_w_bias.bw", "name": "ENCSR823ZCR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR823ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (51 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR823ZCR/chrombpnet_model_feb15_fold_1/ENCSR823ZCR_wo_bias.bw", "name": "ENCSR823ZCR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR823ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (51 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR823ZCR/chrombpnet_model_feb15_fold_1/full_ENCSR823ZCR.counts.bigwig", "name": "ENCSR823ZCR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR823ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (51 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR823ZCR/chrombpnet_model_feb15_fold_1/full_ENCSR823ZCR.profile.bigwig", "name": "ENCSR823ZCR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR823ZCR" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue female adult (51 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR258JCL/preprocessing/bigWigs/ENCSR258JCL.bigWig", "name": "ENCSR258JCL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR258JCL" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (37 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258JCL/chrombpnet_model_feb15_fold_1/ENCSR258JCL_w_bias.bw", "name": "ENCSR258JCL ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258JCL" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (37 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258JCL/chrombpnet_model_feb15_fold_1/ENCSR258JCL_wo_bias.bw", "name": "ENCSR258JCL ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258JCL" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (37 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258JCL/chrombpnet_model_feb15_fold_1/full_ENCSR258JCL.counts.bigwig", "name": "ENCSR258JCL ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258JCL" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (37 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR258JCL/chrombpnet_model_feb15_fold_1/full_ENCSR258JCL.profile.bigwig", "name": "ENCSR258JCL ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258JCL" ], "assay": "ATAC", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (37 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR286STX/preprocessing/bigWigs/ENCSR286STX.bigWig", "name": "ENCSR286STX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR286STX" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR286STX/chrombpnet_model_feb15_fold_1/ENCSR286STX_w_bias.bw", "name": "ENCSR286STX ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR286STX" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR286STX/chrombpnet_model_feb15_fold_1/ENCSR286STX_wo_bias.bw", "name": "ENCSR286STX ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR286STX" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR286STX/chrombpnet_model_feb15_fold_1/full_ENCSR286STX.counts.bigwig", "name": "ENCSR286STX ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR286STX" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR286STX/chrombpnet_model_feb15_fold_1/full_ENCSR286STX.profile.bigwig", "name": "ENCSR286STX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR286STX" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (66 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR831KAH/preprocessing/bigWigs/ENCSR831KAH.bigWig", "name": "ENCSR831KAH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR831KAH" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial nerve tissue female adult (51 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR831KAH/chrombpnet_model_feb15_fold_1/ENCSR831KAH_w_bias.bw", "name": "ENCSR831KAH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR831KAH" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial nerve tissue female adult (51 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR831KAH/chrombpnet_model_feb15_fold_1/ENCSR831KAH_wo_bias.bw", "name": "ENCSR831KAH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR831KAH" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial nerve tissue female adult (51 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR831KAH/chrombpnet_model_feb15_fold_1/full_ENCSR831KAH.counts.bigwig", "name": "ENCSR831KAH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR831KAH" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial nerve tissue female adult (51 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR831KAH/chrombpnet_model_feb15_fold_1/full_ENCSR831KAH.profile.bigwig", "name": "ENCSR831KAH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR831KAH" ], "assay": "ATAC", "biosample summary": "Homo sapiens tibial nerve tissue female adult (51 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR399OSE/preprocessing/bigWigs/ENCSR399OSE.bigWig", "name": "ENCSR399OSE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR399OSE" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (47 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR399OSE/chrombpnet_model_feb15_fold_1/ENCSR399OSE_w_bias.bw", "name": "ENCSR399OSE ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR399OSE" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (47 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR399OSE/chrombpnet_model_feb15_fold_1/ENCSR399OSE_wo_bias.bw", "name": "ENCSR399OSE ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR399OSE" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (47 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR399OSE/chrombpnet_model_feb15_fold_1/full_ENCSR399OSE.counts.bigwig", "name": "ENCSR399OSE ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR399OSE" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (47 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR399OSE/chrombpnet_model_feb15_fold_1/full_ENCSR399OSE.profile.bigwig", "name": "ENCSR399OSE ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR399OSE" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (47 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR113MBR/preprocessing/bigWigs/ENCSR113MBR.bigWig", "name": "ENCSR113MBR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR113MBR" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (54 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR113MBR/chrombpnet_model_feb15_fold_1/ENCSR113MBR_w_bias.bw", "name": "ENCSR113MBR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR113MBR" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (54 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR113MBR/chrombpnet_model_feb15_fold_1/ENCSR113MBR_wo_bias.bw", "name": "ENCSR113MBR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR113MBR" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (54 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR113MBR/chrombpnet_model_feb15_fold_1/full_ENCSR113MBR.counts.bigwig", "name": "ENCSR113MBR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR113MBR" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (54 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR113MBR/chrombpnet_model_feb15_fold_1/full_ENCSR113MBR.profile.bigwig", "name": "ENCSR113MBR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR113MBR" ], "assay": "ATAC", "biosample summary": "Homo sapiens adrenal gland tissue male adult (54 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR086OGH/preprocessing/bigWigs/ENCSR086OGH.bigWig", "name": "ENCSR086OGH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR086OGH" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (54 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR086OGH/chrombpnet_model_feb15_fold_1/ENCSR086OGH_w_bias.bw", "name": "ENCSR086OGH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR086OGH" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (54 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR086OGH/chrombpnet_model_feb15_fold_1/ENCSR086OGH_wo_bias.bw", "name": "ENCSR086OGH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR086OGH" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (54 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR086OGH/chrombpnet_model_feb15_fold_1/full_ENCSR086OGH.counts.bigwig", "name": "ENCSR086OGH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR086OGH" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (54 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR086OGH/chrombpnet_model_feb15_fold_1/full_ENCSR086OGH.profile.bigwig", "name": "ENCSR086OGH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR086OGH" ], "assay": "ATAC", "biosample summary": "Homo sapiens sigmoid colon tissue male adult (54 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR886VCC/preprocessing/bigWigs/ENCSR886VCC.bigWig", "name": "ENCSR886VCC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR886VCC" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (47 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR886VCC/chrombpnet_model_feb15_fold_1/ENCSR886VCC_w_bias.bw", "name": "ENCSR886VCC ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR886VCC" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (47 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR886VCC/chrombpnet_model_feb15_fold_1/ENCSR886VCC_wo_bias.bw", "name": "ENCSR886VCC ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR886VCC" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (47 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR886VCC/chrombpnet_model_feb15_fold_1/full_ENCSR886VCC.counts.bigwig", "name": "ENCSR886VCC ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR886VCC" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (47 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR886VCC/chrombpnet_model_feb15_fold_1/full_ENCSR886VCC.profile.bigwig", "name": "ENCSR886VCC ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR886VCC" ], "assay": "ATAC", "biosample summary": "Homo sapiens psoas muscle tissue female adult (47 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR729FNL/preprocessing/bigWigs/ENCSR729FNL.bigWig", "name": "ENCSR729FNL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR729FNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior cingulate cortex tissue male adult (20 years)", "biosample term name": "posterior cingulate cortex", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR729FNL/chrombpnet_model_feb15_fold_1/ENCSR729FNL_w_bias.bw", "name": "ENCSR729FNL ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR729FNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior cingulate cortex tissue male adult (20 years)", "biosample term name": "posterior cingulate cortex", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR729FNL/chrombpnet_model_feb15_fold_1/ENCSR729FNL_wo_bias.bw", "name": "ENCSR729FNL ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR729FNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior cingulate cortex tissue male adult (20 years)", "biosample term name": "posterior cingulate cortex", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR729FNL/chrombpnet_model_feb15_fold_1/full_ENCSR729FNL.counts.bigwig", "name": "ENCSR729FNL ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR729FNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior cingulate cortex tissue male adult (20 years)", "biosample term name": "posterior cingulate cortex", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR729FNL/chrombpnet_model_feb15_fold_1/full_ENCSR729FNL.profile.bigwig", "name": "ENCSR729FNL ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR729FNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior cingulate cortex tissue male adult (20 years)", "biosample term name": "posterior cingulate cortex", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR940YDN/preprocessing/bigWigs/ENCSR940YDN.bigWig", "name": "ENCSR940YDN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR940YDN" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03159", "biosample term name": "HG03159", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940YDN/chrombpnet_model_feb15_fold_1/ENCSR940YDN_w_bias.bw", "name": "ENCSR940YDN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR940YDN" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03159", "biosample term name": "HG03159", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940YDN/chrombpnet_model_feb15_fold_1/ENCSR940YDN_wo_bias.bw", "name": "ENCSR940YDN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR940YDN" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03159", "biosample term name": "HG03159", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940YDN/chrombpnet_model_feb15_fold_1/full_ENCSR940YDN.counts.bigwig", "name": "ENCSR940YDN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR940YDN" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03159", "biosample term name": "HG03159", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940YDN/chrombpnet_model_feb15_fold_1/full_ENCSR940YDN.profile.bigwig", "name": "ENCSR940YDN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR940YDN" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03159", "biosample term name": "HG03159", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR409YCK/preprocessing/bigWigs/ENCSR409YCK.bigWig", "name": "ENCSR409YCK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR409YCK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19043", "biosample term name": "GM19043", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR409YCK/chrombpnet_model_feb15_fold_1/ENCSR409YCK_w_bias.bw", "name": "ENCSR409YCK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR409YCK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19043", "biosample term name": "GM19043", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR409YCK/chrombpnet_model_feb15_fold_1/ENCSR409YCK_wo_bias.bw", "name": "ENCSR409YCK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR409YCK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19043", "biosample term name": "GM19043", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR409YCK/chrombpnet_model_feb15_fold_1/full_ENCSR409YCK.counts.bigwig", "name": "ENCSR409YCK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR409YCK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19043", "biosample term name": "GM19043", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR409YCK/chrombpnet_model_feb15_fold_1/full_ENCSR409YCK.profile.bigwig", "name": "ENCSR409YCK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR409YCK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19043", "biosample term name": "GM19043", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR960KGO/preprocessing/bigWigs/ENCSR960KGO.bigWig", "name": "ENCSR960KGO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR960KGO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21515", "biosample term name": "GM21515", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR960KGO/chrombpnet_model_feb15_fold_1/ENCSR960KGO_w_bias.bw", "name": "ENCSR960KGO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR960KGO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21515", "biosample term name": "GM21515", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR960KGO/chrombpnet_model_feb15_fold_1/ENCSR960KGO_wo_bias.bw", "name": "ENCSR960KGO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR960KGO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21515", "biosample term name": "GM21515", "life stage": "adult" } }, { "type": "dynseq", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR357WQH/chrombpnet_model_feb15_fold_1/full_ENCSR357WQH.profile.bigwig", "name": "ENCSR357WQH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR357WQH" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18508", "biosample term name": "GM18508", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR524CPZ/preprocessing/bigWigs/ENCSR524CPZ.bigWig", "name": "ENCSR524CPZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR524CPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02798", "biosample term name": "HG02798", "life stage": "adult" } }, { "type": "bigwig", "url": 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"url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204FCV/chrombpnet_model_feb15_fold_1/ENCSR204FCV_wo_bias.bw", "name": "ENCSR204FCV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR204FCV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204FCV/chrombpnet_model_feb15_fold_1/full_ENCSR204FCV.counts.bigwig", "name": "ENCSR204FCV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR204FCV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204FCV/chrombpnet_model_feb15_fold_1/full_ENCSR204FCV.profile.bigwig", "name": "ENCSR204FCV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR204FCV" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR059IHA/preprocessing/bigWigs/ENCSR059IHA.bigWig", "name": "ENCSR059IHA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR059IHA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR059IHA/chrombpnet_model_feb15_fold_1/ENCSR059IHA_w_bias.bw", "name": "ENCSR059IHA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR059IHA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR059IHA/chrombpnet_model_feb15_fold_1/ENCSR059IHA_wo_bias.bw", "name": "ENCSR059IHA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR059IHA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR059IHA/chrombpnet_model_feb15_fold_1/full_ENCSR059IHA.counts.bigwig", "name": "ENCSR059IHA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR059IHA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR059IHA/chrombpnet_model_feb15_fold_1/full_ENCSR059IHA.profile.bigwig", "name": "ENCSR059IHA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR059IHA" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR634WYX/preprocessing/bigWigs/ENCSR634WYX.bigWig", "name": "ENCSR634WYX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR634WYX" ], "assay": "ATAC", "biosample summary": "Homo sapiens from a donor with amyotrophic lateral sclerosis; motor neuron", "biosample term name": "motor neuron", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR634WYX/chrombpnet_model_feb15_fold_1/ENCSR634WYX_w_bias.bw", "name": "ENCSR634WYX ATAC uncorrected predictions", "showOnHubLoad": false, 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"assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR131CHJ/chrombpnet_model_feb15_fold_1/full_ENCSR131CHJ.profile.bigwig", "name": "ENCSR131CHJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR131CHJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR901IEQ/preprocessing/bigWigs/ENCSR901IEQ.bigWig", "name": "ENCSR901IEQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": 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stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR926GDT/chrombpnet_model_feb15_fold_1/ENCSR926GDT_w_bias.bw", "name": "ENCSR926GDT ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR926GDT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR926GDT/chrombpnet_model_feb15_fold_1/ENCSR926GDT_wo_bias.bw", "name": "ENCSR926GDT ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR926GDT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR926GDT/chrombpnet_model_feb15_fold_1/full_ENCSR926GDT.counts.bigwig", "name": "ENCSR926GDT ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR926GDT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 4 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR926GDT/chrombpnet_model_feb15_fold_1/full_ENCSR926GDT.profile.bigwig", "name": "ENCSR926GDT ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ 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}, "metadata": { "sample": [ "ENCSR566LZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR566LZT/chrombpnet_model_feb15_fold_1/ENCSR566LZT_wo_bias.bw", "name": "ENCSR566LZT ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR566LZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR566LZT/chrombpnet_model_feb15_fold_1/full_ENCSR566LZT.counts.bigwig", "name": "ENCSR566LZT ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR566LZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR566LZT/chrombpnet_model_feb15_fold_1/full_ENCSR566LZT.profile.bigwig", "name": "ENCSR566LZT ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR566LZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR653VSR/preprocessing/bigWigs/ENCSR653VSR.bigWig", "name": "ENCSR653VSR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR653VSR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell female adult (39 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653VSR/chrombpnet_model_feb15_fold_1/ENCSR653VSR_w_bias.bw", "name": "ENCSR653VSR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR653VSR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell female adult (39 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653VSR/chrombpnet_model_feb15_fold_1/ENCSR653VSR_wo_bias.bw", "name": "ENCSR653VSR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR653VSR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell female adult (39 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653VSR/chrombpnet_model_feb15_fold_1/full_ENCSR653VSR.counts.bigwig", "name": "ENCSR653VSR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR653VSR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell female adult (39 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653VSR/chrombpnet_model_feb15_fold_1/full_ENCSR653VSR.profile.bigwig", "name": "ENCSR653VSR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR653VSR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive B cell female adult (39 years) treated with 1 \u03bcg/mL anti-CD40 for 72 hours, 10 \u03bcg/mL anti-IgM for 72 hours, 100 ng/mL Interleukin-4 for 72 hours", "biosample term name": "stimulated activated naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR283LPH/preprocessing/bigWigs/ENCSR283LPH.bigWig", "name": "ENCSR283LPH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR283LPH" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR283LPH/chrombpnet_model_feb15_fold_1/ENCSR283LPH_w_bias.bw", "name": "ENCSR283LPH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR283LPH" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR283LPH/chrombpnet_model_feb15_fold_1/ENCSR283LPH_wo_bias.bw", "name": "ENCSR283LPH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR283LPH" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR283LPH/chrombpnet_model_feb15_fold_1/full_ENCSR283LPH.counts.bigwig", "name": "ENCSR283LPH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR283LPH" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR283LPH/chrombpnet_model_feb15_fold_1/full_ENCSR283LPH.profile.bigwig", "name": "ENCSR283LPH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR283LPH" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell nuclear fraction male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR558ZSN/preprocessing/bigWigs/ENCSR558ZSN.bigWig", "name": "ENCSR558ZSN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR558ZSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR558ZSN/chrombpnet_model_feb15_fold_1/ENCSR558ZSN_w_bias.bw", "name": "ENCSR558ZSN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR558ZSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR558ZSN/chrombpnet_model_feb15_fold_1/ENCSR558ZSN_wo_bias.bw", "name": "ENCSR558ZSN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR558ZSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR558ZSN/chrombpnet_model_feb15_fold_1/full_ENCSR558ZSN.counts.bigwig", "name": "ENCSR558ZSN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR558ZSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR558ZSN/chrombpnet_model_feb15_fold_1/full_ENCSR558ZSN.profile.bigwig", "name": "ENCSR558ZSN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR558ZSN" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR830ALP/preprocessing/bigWigs/ENCSR830ALP.bigWig", "name": "ENCSR830ALP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR830ALP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR830ALP/chrombpnet_model_feb15_fold_1/ENCSR830ALP_w_bias.bw", "name": "ENCSR830ALP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR830ALP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR830ALP/chrombpnet_model_feb15_fold_1/ENCSR830ALP_wo_bias.bw", "name": "ENCSR830ALP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR830ALP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR830ALP/chrombpnet_model_feb15_fold_1/full_ENCSR830ALP.counts.bigwig", "name": "ENCSR830ALP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR830ALP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR830ALP/chrombpnet_model_feb15_fold_1/full_ENCSR830ALP.profile.bigwig", "name": "ENCSR830ALP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR830ALP" ], "assay": "ATAC", "biosample summary": "Homo sapiens activated T-cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 50 U/mL Interleukin-2 for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR476VJY/preprocessing/bigWigs/ENCSR476VJY.bigWig", "name": "ENCSR476VJY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR476VJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR476VJY/chrombpnet_model_feb15_fold_1/ENCSR476VJY_w_bias.bw", "name": "ENCSR476VJY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR476VJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR476VJY/chrombpnet_model_feb15_fold_1/ENCSR476VJY_wo_bias.bw", "name": "ENCSR476VJY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR476VJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR476VJY/chrombpnet_model_feb15_fold_1/full_ENCSR476VJY.counts.bigwig", "name": "ENCSR476VJY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR476VJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR476VJY/chrombpnet_model_feb15_fold_1/full_ENCSR476VJY.profile.bigwig", "name": "ENCSR476VJY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR476VJY" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR420RVW/preprocessing/bigWigs/ENCSR420RVW.bigWig", "name": "ENCSR420RVW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR420RVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02870", "biosample term name": "HG02870", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR420RVW/chrombpnet_model_feb15_fold_1/ENCSR420RVW_w_bias.bw", "name": "ENCSR420RVW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR420RVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02870", "biosample term name": "HG02870", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR420RVW/chrombpnet_model_feb15_fold_1/ENCSR420RVW_wo_bias.bw", "name": "ENCSR420RVW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR420RVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02870", "biosample term name": "HG02870", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR420RVW/chrombpnet_model_feb15_fold_1/full_ENCSR420RVW.counts.bigwig", "name": "ENCSR420RVW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR420RVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02870", "biosample term name": "HG02870", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR420RVW/chrombpnet_model_feb15_fold_1/full_ENCSR420RVW.profile.bigwig", "name": "ENCSR420RVW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR420RVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02870", "biosample term name": "HG02870", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR368FYV/preprocessing/bigWigs/ENCSR368FYV.bigWig", "name": "ENCSR368FYV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR368FYV" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02852", "biosample term name": "HG02852", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR368FYV/chrombpnet_model_feb15_fold_1/ENCSR368FYV_w_bias.bw", "name": "ENCSR368FYV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR368FYV" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02852", "biosample term name": "HG02852", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR368FYV/chrombpnet_model_feb15_fold_1/ENCSR368FYV_wo_bias.bw", "name": "ENCSR368FYV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR368FYV" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02852", "biosample term name": "HG02852", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR368FYV/chrombpnet_model_feb15_fold_1/full_ENCSR368FYV.counts.bigwig", "name": "ENCSR368FYV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR368FYV" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02852", "biosample term name": "HG02852", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR368FYV/chrombpnet_model_feb15_fold_1/full_ENCSR368FYV.profile.bigwig", "name": "ENCSR368FYV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR368FYV" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02852", "biosample term name": "HG02852", "life stage": "adult" } }, { "type": "bigwig", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR857MCZ/preprocessing/bigWigs/ENCSR857MCZ.bigWig", "name": "ENCSR857MCZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR857MCZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02970", "biosample term name": "HG02970", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR857MCZ/chrombpnet_model_feb15_fold_1/ENCSR857MCZ_w_bias.bw", "name": "ENCSR857MCZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR857MCZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02970", "biosample term name": "HG02970", "life stage": "adult" } }, { "type": "bigwig", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR857MCZ/chrombpnet_model_feb15_fold_1/full_ENCSR857MCZ.profile.bigwig", "name": "ENCSR857MCZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR857MCZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02970", "biosample term name": "HG02970", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR939EVW/preprocessing/bigWigs/ENCSR939EVW.bigWig", "name": "ENCSR939EVW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR939EVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21528", "biosample term name": "GM21528", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR939EVW/chrombpnet_model_feb15_fold_1/ENCSR939EVW_w_bias.bw", "name": "ENCSR939EVW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR939EVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21528", "biosample term name": "GM21528", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR939EVW/chrombpnet_model_feb15_fold_1/ENCSR939EVW_wo_bias.bw", "name": "ENCSR939EVW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR939EVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21528", "biosample term name": "GM21528", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR939EVW/chrombpnet_model_feb15_fold_1/full_ENCSR939EVW.counts.bigwig", "name": "ENCSR939EVW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR939EVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21528", "biosample term name": "GM21528", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR939EVW/chrombpnet_model_feb15_fold_1/full_ENCSR939EVW.profile.bigwig", "name": "ENCSR939EVW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR939EVW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21528", "biosample term name": "GM21528", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR902CFR/preprocessing/bigWigs/ENCSR902CFR.bigWig", "name": "ENCSR902CFR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR902CFR" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21423", "biosample term name": "GM21423", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR902CFR/chrombpnet_model_feb15_fold_1/ENCSR902CFR_w_bias.bw", "name": "ENCSR902CFR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR902CFR" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21423", "biosample term name": "GM21423", "life stage": "adult" } }, { "type": "bigwig", "url": 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"life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR208NBF/chrombpnet_model_feb15_fold_1/ENCSR208NBF_wo_bias.bw", "name": "ENCSR208NBF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR208NBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR208NBF/chrombpnet_model_feb15_fold_1/full_ENCSR208NBF.counts.bigwig", "name": "ENCSR208NBF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR208NBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR208NBF/chrombpnet_model_feb15_fold_1/full_ENCSR208NBF.profile.bigwig", "name": "ENCSR208NBF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR208NBF" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 2 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR237VSF/preprocessing/bigWigs/ENCSR237VSF.bigWig", "name": "ENCSR237VSF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR237VSF" ], "assay": "ATAC", 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR904UKR/chrombpnet_model_feb15_fold_1/full_ENCSR904UKR.counts.bigwig", "name": "ENCSR904UKR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR904UKR" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 6 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR904UKR/chrombpnet_model_feb15_fold_1/full_ENCSR904UKR.profile.bigwig", "name": "ENCSR904UKR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR904UKR" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 6 hours", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR940QJU/preprocessing/bigWigs/ENCSR940QJU.bigWig", "name": "ENCSR940QJU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR940QJU" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940QJU/chrombpnet_model_feb15_fold_1/ENCSR940QJU_w_bias.bw", "name": "ENCSR940QJU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR940QJU" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940QJU/chrombpnet_model_feb15_fold_1/ENCSR940QJU_wo_bias.bw", "name": "ENCSR940QJU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR940QJU" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940QJU/chrombpnet_model_feb15_fold_1/full_ENCSR940QJU.counts.bigwig", "name": "ENCSR940QJU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR940QJU" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR940QJU/chrombpnet_model_feb15_fold_1/full_ENCSR940QJU.profile.bigwig", "name": "ENCSR940QJU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR940QJU" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with lipopolysaccharide", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR637OPZ/preprocessing/bigWigs/ENCSR637OPZ.bigWig", "name": "ENCSR637OPZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR637OPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-15 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637OPZ/chrombpnet_model_feb15_fold_1/ENCSR637OPZ_w_bias.bw", "name": "ENCSR637OPZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR637OPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-15 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637OPZ/chrombpnet_model_feb15_fold_1/ENCSR637OPZ_wo_bias.bw", "name": "ENCSR637OPZ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR637OPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-15 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637OPZ/chrombpnet_model_feb15_fold_1/full_ENCSR637OPZ.counts.bigwig", "name": "ENCSR637OPZ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR637OPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-15 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR637OPZ/chrombpnet_model_feb15_fold_1/full_ENCSR637OPZ.profile.bigwig", "name": "ENCSR637OPZ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR637OPZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-15 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR392YGP/preprocessing/bigWigs/ENCSR392YGP.bigWig", "name": "ENCSR392YGP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR392YGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392YGP/chrombpnet_model_feb15_fold_1/ENCSR392YGP_w_bias.bw", "name": "ENCSR392YGP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR392YGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392YGP/chrombpnet_model_feb15_fold_1/ENCSR392YGP_wo_bias.bw", "name": "ENCSR392YGP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR392YGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392YGP/chrombpnet_model_feb15_fold_1/full_ENCSR392YGP.counts.bigwig", "name": "ENCSR392YGP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR392YGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR392YGP/chrombpnet_model_feb15_fold_1/full_ENCSR392YGP.profile.bigwig", "name": "ENCSR392YGP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR392YGP" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR673ZMQ/preprocessing/bigWigs/ENCSR673ZMQ.bigWig", "name": "ENCSR673ZMQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR673ZMQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03025", "biosample term name": "HG03025", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR673ZMQ/chrombpnet_model_feb15_fold_1/ENCSR673ZMQ_w_bias.bw", "name": "ENCSR673ZMQ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR673ZMQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03025", "biosample term name": "HG03025", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR673ZMQ/chrombpnet_model_feb15_fold_1/ENCSR673ZMQ_wo_bias.bw", "name": "ENCSR673ZMQ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR673ZMQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03025", "biosample term name": "HG03025", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR673ZMQ/chrombpnet_model_feb15_fold_1/full_ENCSR673ZMQ.counts.bigwig", "name": "ENCSR673ZMQ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR673ZMQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03025", "biosample term name": "HG03025", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR673ZMQ/chrombpnet_model_feb15_fold_1/full_ENCSR673ZMQ.profile.bigwig", "name": "ENCSR673ZMQ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR673ZMQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03025", "biosample term name": "HG03025", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR105SCQ/preprocessing/bigWigs/ENCSR105SCQ.bigWig", "name": "ENCSR105SCQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR105SCQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21360", "biosample term name": "GM21360", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR105SCQ/chrombpnet_model_feb15_fold_1/ENCSR105SCQ_w_bias.bw", "name": "ENCSR105SCQ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR105SCQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21360", "biosample term name": "GM21360", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR105SCQ/chrombpnet_model_feb15_fold_1/ENCSR105SCQ_wo_bias.bw", "name": "ENCSR105SCQ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR105SCQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21360", "biosample term name": "GM21360", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR105SCQ/chrombpnet_model_feb15_fold_1/full_ENCSR105SCQ.counts.bigwig", "name": "ENCSR105SCQ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR105SCQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21360", "biosample term name": "GM21360", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR105SCQ/chrombpnet_model_feb15_fold_1/full_ENCSR105SCQ.profile.bigwig", "name": "ENCSR105SCQ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR105SCQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21360", "biosample term name": "GM21360", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR839UOB/preprocessing/bigWigs/ENCSR839UOB.bigWig", "name": "ENCSR839UOB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR839UOB" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03432", "biosample term name": "HG03432", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR839UOB/chrombpnet_model_feb15_fold_1/ENCSR839UOB_w_bias.bw", "name": "ENCSR839UOB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR839UOB" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03432", "biosample term name": "HG03432", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR839UOB/chrombpnet_model_feb15_fold_1/ENCSR839UOB_wo_bias.bw", "name": "ENCSR839UOB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR839UOB" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03432", "biosample term name": "HG03432", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR839UOB/chrombpnet_model_feb15_fold_1/full_ENCSR839UOB.counts.bigwig", "name": "ENCSR839UOB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR839UOB" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03432", "biosample term name": "HG03432", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR839UOB/chrombpnet_model_feb15_fold_1/full_ENCSR839UOB.profile.bigwig", "name": "ENCSR839UOB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR839UOB" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03432", "biosample term name": "HG03432", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR278JWM/preprocessing/bigWigs/ENCSR278JWM.bigWig", "name": "ENCSR278JWM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR278JWM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03558", "biosample term name": "HG03558", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR278JWM/chrombpnet_model_feb15_fold_1/ENCSR278JWM_w_bias.bw", "name": "ENCSR278JWM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR278JWM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03558", "biosample term name": "HG03558", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR278JWM/chrombpnet_model_feb15_fold_1/ENCSR278JWM_wo_bias.bw", "name": "ENCSR278JWM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR278JWM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03558", "biosample term name": "HG03558", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR278JWM/chrombpnet_model_feb15_fold_1/full_ENCSR278JWM.counts.bigwig", "name": "ENCSR278JWM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR278JWM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03558", "biosample term name": "HG03558", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR278JWM/chrombpnet_model_feb15_fold_1/full_ENCSR278JWM.profile.bigwig", "name": "ENCSR278JWM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR278JWM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03558", "biosample term name": "HG03558", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR604YEQ/preprocessing/bigWigs/ENCSR604YEQ.bigWig", "name": "ENCSR604YEQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR604YEQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02884", "biosample term name": "HG02884", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR604YEQ/chrombpnet_model_feb15_fold_1/ENCSR604YEQ_w_bias.bw", "name": "ENCSR604YEQ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR604YEQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02884", "biosample term name": "HG02884", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR604YEQ/chrombpnet_model_feb15_fold_1/ENCSR604YEQ_wo_bias.bw", "name": "ENCSR604YEQ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR604YEQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02884", "biosample term name": "HG02884", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR604YEQ/chrombpnet_model_feb15_fold_1/full_ENCSR604YEQ.counts.bigwig", "name": "ENCSR604YEQ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR604YEQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02884", "biosample term name": "HG02884", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR604YEQ/chrombpnet_model_feb15_fold_1/full_ENCSR604YEQ.profile.bigwig", "name": "ENCSR604YEQ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR604YEQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02884", "biosample term name": "HG02884", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR833ACP/preprocessing/bigWigs/ENCSR833ACP.bigWig", "name": "ENCSR833ACP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR833ACP" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03103", "biosample term name": "HG03103", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR833ACP/chrombpnet_model_feb15_fold_1/ENCSR833ACP_w_bias.bw", "name": "ENCSR833ACP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR833ACP" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03103", "biosample term name": "HG03103", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR833ACP/chrombpnet_model_feb15_fold_1/ENCSR833ACP_wo_bias.bw", "name": "ENCSR833ACP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR833ACP" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03103", "biosample term name": "HG03103", "life stage": "adult" } }, { "type": "dynseq", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR381LJX/chrombpnet_model_feb15_fold_1/full_ENCSR381LJX.profile.bigwig", "name": "ENCSR381LJX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR381LJX" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03039", "biosample term name": "HG03039", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR962ITF/preprocessing/bigWigs/ENCSR962ITF.bigWig", "name": "ENCSR962ITF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR962ITF" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03108", "biosample term name": "HG03108", "life stage": "adult" } }, { "type": "bigwig", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR962ITF/chrombpnet_model_feb15_fold_1/full_ENCSR962ITF.counts.bigwig", "name": "ENCSR962ITF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR962ITF" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03108", "biosample term name": "HG03108", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR962ITF/chrombpnet_model_feb15_fold_1/full_ENCSR962ITF.profile.bigwig", "name": "ENCSR962ITF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR962ITF" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03108", "biosample term name": "HG03108", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR084FHK/preprocessing/bigWigs/ENCSR084FHK.bigWig", "name": "ENCSR084FHK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR084FHK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18505", "biosample term name": "GM18505", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR084FHK/chrombpnet_model_feb15_fold_1/ENCSR084FHK_w_bias.bw", "name": "ENCSR084FHK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR084FHK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18505", "biosample term name": "GM18505", "life stage": "adult" } }, { "type": "bigwig", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR084FHK/chrombpnet_model_feb15_fold_1/full_ENCSR084FHK.profile.bigwig", "name": "ENCSR084FHK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR084FHK" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18505", "biosample term name": "GM18505", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR253QLW/preprocessing/bigWigs/ENCSR253QLW.bigWig", "name": "ENCSR253QLW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR253QLW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18511", "biosample term name": "GM18511", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR253QLW/chrombpnet_model_feb15_fold_1/ENCSR253QLW_w_bias.bw", "name": "ENCSR253QLW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR253QLW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18511", "biosample term name": "GM18511", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR253QLW/chrombpnet_model_feb15_fold_1/ENCSR253QLW_wo_bias.bw", "name": "ENCSR253QLW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR253QLW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18511", "biosample term name": "GM18511", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR253QLW/chrombpnet_model_feb15_fold_1/full_ENCSR253QLW.counts.bigwig", "name": "ENCSR253QLW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR253QLW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18511", "biosample term name": "GM18511", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR253QLW/chrombpnet_model_feb15_fold_1/full_ENCSR253QLW.profile.bigwig", "name": "ENCSR253QLW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR253QLW" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18511", "biosample term name": "GM18511", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR156FDX/preprocessing/bigWigs/ENCSR156FDX.bigWig", "name": "ENCSR156FDX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR156FDX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR156FDX/chrombpnet_model_feb15_fold_1/ENCSR156FDX_w_bias.bw", "name": "ENCSR156FDX ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR156FDX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR156FDX/chrombpnet_model_feb15_fold_1/ENCSR156FDX_wo_bias.bw", "name": "ENCSR156FDX ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR156FDX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR156FDX/chrombpnet_model_feb15_fold_1/full_ENCSR156FDX.counts.bigwig", "name": "ENCSR156FDX ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR156FDX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR156FDX/chrombpnet_model_feb15_fold_1/full_ENCSR156FDX.profile.bigwig", "name": "ENCSR156FDX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR156FDX" ], "assay": "ATAC", "biosample summary": "Homo sapiens dendritic cell treated with 100 ng/mL lipopolysaccharide for 30 minutes", "biosample term name": "dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR144ZXR/preprocessing/bigWigs/ENCSR144ZXR.bigWig", "name": "ENCSR144ZXR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR144ZXR" ], "assay": 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HG02759", "biosample term name": "HG02759", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR144ZXR/chrombpnet_model_feb15_fold_1/full_ENCSR144ZXR.counts.bigwig", "name": "ENCSR144ZXR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR144ZXR" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02759", "biosample term name": "HG02759", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR144ZXR/chrombpnet_model_feb15_fold_1/full_ENCSR144ZXR.profile.bigwig", "name": "ENCSR144ZXR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR144ZXR" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02759", "biosample term name": "HG02759", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR700HPA/preprocessing/bigWigs/ENCSR700HPA.bigWig", "name": "ENCSR700HPA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR700HPA" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18499", "biosample term name": "GM18499", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR700HPA/chrombpnet_model_feb15_fold_1/ENCSR700HPA_w_bias.bw", "name": "ENCSR700HPA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR700HPA" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18499", "biosample term name": "GM18499", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR700HPA/chrombpnet_model_feb15_fold_1/ENCSR700HPA_wo_bias.bw", "name": "ENCSR700HPA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR700HPA" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18499", "biosample term name": "GM18499", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR700HPA/chrombpnet_model_feb15_fold_1/full_ENCSR700HPA.counts.bigwig", "name": "ENCSR700HPA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR700HPA" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18499", "biosample term name": "GM18499", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR700HPA/chrombpnet_model_feb15_fold_1/full_ENCSR700HPA.profile.bigwig", "name": "ENCSR700HPA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR700HPA" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM18499", "biosample term name": "GM18499", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR096VEO/preprocessing/bigWigs/ENCSR096VEO.bigWig", "name": "ENCSR096VEO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR096VEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03135", "biosample term name": "HG03135", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096VEO/chrombpnet_model_feb15_fold_1/ENCSR096VEO_w_bias.bw", "name": "ENCSR096VEO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR096VEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03135", "biosample term name": "HG03135", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096VEO/chrombpnet_model_feb15_fold_1/ENCSR096VEO_wo_bias.bw", "name": "ENCSR096VEO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR096VEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03135", "biosample term name": "HG03135", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096VEO/chrombpnet_model_feb15_fold_1/full_ENCSR096VEO.counts.bigwig", "name": "ENCSR096VEO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR096VEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03135", "biosample term name": "HG03135", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR096VEO/chrombpnet_model_feb15_fold_1/full_ENCSR096VEO.profile.bigwig", "name": "ENCSR096VEO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR096VEO" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03135", "biosample term name": "HG03135", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR487SOP/preprocessing/bigWigs/ENCSR487SOP.bigWig", "name": "ENCSR487SOP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR487SOP" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03064", "biosample term name": "HG03064", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR487SOP/chrombpnet_model_feb15_fold_1/ENCSR487SOP_w_bias.bw", "name": "ENCSR487SOP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR487SOP" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03064", "biosample term name": "HG03064", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR487SOP/chrombpnet_model_feb15_fold_1/ENCSR487SOP_wo_bias.bw", "name": "ENCSR487SOP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR487SOP" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03064", "biosample term name": "HG03064", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR487SOP/chrombpnet_model_feb15_fold_1/full_ENCSR487SOP.counts.bigwig", "name": "ENCSR487SOP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR487SOP" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03064", "biosample term name": "HG03064", "life stage": "adult" } }, { "type": "dynseq", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR858GTE/chrombpnet_model_feb15_fold_1/full_ENCSR858GTE.counts.bigwig", "name": "ENCSR858GTE ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR858GTE" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03442", "biosample term name": "HG03442", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR858GTE/chrombpnet_model_feb15_fold_1/full_ENCSR858GTE.profile.bigwig", "name": "ENCSR858GTE ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR858GTE" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03442", "biosample term name": "HG03442", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR383RDZ/preprocessing/bigWigs/ENCSR383RDZ.bigWig", "name": "ENCSR383RDZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR383RDZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19328", "biosample term name": "GM19328", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR383RDZ/chrombpnet_model_feb15_fold_1/ENCSR383RDZ_w_bias.bw", "name": "ENCSR383RDZ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR383RDZ" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM19328", "biosample term name": "GM19328", "life stage": "adult" } }, { "type": "bigwig", "url": 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"https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR512YXO/preprocessing/bigWigs/ENCSR512YXO.bigWig", "name": "ENCSR512YXO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR512YXO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21381", "biosample term name": "GM21381", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR512YXO/chrombpnet_model_feb15_fold_1/ENCSR512YXO_w_bias.bw", "name": "ENCSR512YXO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR512YXO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21381", "biosample term name": "GM21381", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR512YXO/chrombpnet_model_feb15_fold_1/ENCSR512YXO_wo_bias.bw", "name": "ENCSR512YXO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR512YXO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21381", "biosample term name": "GM21381", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR512YXO/chrombpnet_model_feb15_fold_1/full_ENCSR512YXO.counts.bigwig", "name": "ENCSR512YXO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR512YXO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21381", "biosample term name": "GM21381", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR512YXO/chrombpnet_model_feb15_fold_1/full_ENCSR512YXO.profile.bigwig", "name": "ENCSR512YXO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR512YXO" ], "assay": "ATAC", "biosample summary": "Homo sapiens GM21381", "biosample term name": "GM21381", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR614JAG/preprocessing/bigWigs/ENCSR614JAG.bigWig", "name": "ENCSR614JAG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR614JAG" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR614JAG/chrombpnet_model_feb15_fold_1/ENCSR614JAG_w_bias.bw", "name": "ENCSR614JAG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR614JAG" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR614JAG/chrombpnet_model_feb15_fold_1/ENCSR614JAG_wo_bias.bw", "name": "ENCSR614JAG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR614JAG" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR614JAG/chrombpnet_model_feb15_fold_1/full_ENCSR614JAG.counts.bigwig", "name": "ENCSR614JAG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR614JAG" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR614JAG/chrombpnet_model_feb15_fold_1/full_ENCSR614JAG.profile.bigwig", "name": "ENCSR614JAG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR614JAG" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR483RKN/preprocessing/bigWigs/ENCSR483RKN.bigWig", "name": "ENCSR483RKN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR483RKN" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR483RKN/chrombpnet_model_feb15_fold_1/ENCSR483RKN_w_bias.bw", "name": "ENCSR483RKN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR483RKN" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR483RKN/chrombpnet_model_feb15_fold_1/ENCSR483RKN_wo_bias.bw", "name": "ENCSR483RKN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR483RKN" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR483RKN/chrombpnet_model_feb15_fold_1/full_ENCSR483RKN.counts.bigwig", "name": "ENCSR483RKN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR483RKN" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR483RKN/chrombpnet_model_feb15_fold_1/full_ENCSR483RKN.profile.bigwig", "name": "ENCSR483RKN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR483RKN" ], "assay": "ATAC", "biosample summary": "Homo sapiens K562", "biosample term name": "K562", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR854ZBA/preprocessing/bigWigs/ENCSR854ZBA.bigWig", "name": "ENCSR854ZBA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR854ZBA" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02840", "biosample term name": "HG02840", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854ZBA/chrombpnet_model_feb15_fold_1/ENCSR854ZBA_w_bias.bw", "name": "ENCSR854ZBA ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR854ZBA" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02840", "biosample term name": "HG02840", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854ZBA/chrombpnet_model_feb15_fold_1/ENCSR854ZBA_wo_bias.bw", "name": "ENCSR854ZBA ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR854ZBA" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02840", "biosample term name": "HG02840", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854ZBA/chrombpnet_model_feb15_fold_1/full_ENCSR854ZBA.counts.bigwig", "name": "ENCSR854ZBA ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR854ZBA" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02840", "biosample term name": "HG02840", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR854ZBA/chrombpnet_model_feb15_fold_1/full_ENCSR854ZBA.profile.bigwig", "name": "ENCSR854ZBA ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR854ZBA" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG02840", "biosample term name": "HG02840", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR042AWH/preprocessing/bigWigs/ENCSR042AWH.bigWig", "name": "ENCSR042AWH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR042AWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR042AWH/chrombpnet_model_feb15_fold_1/ENCSR042AWH_w_bias.bw", "name": "ENCSR042AWH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR042AWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR042AWH/chrombpnet_model_feb15_fold_1/ENCSR042AWH_wo_bias.bw", "name": "ENCSR042AWH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR042AWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR042AWH/chrombpnet_model_feb15_fold_1/full_ENCSR042AWH.counts.bigwig", "name": "ENCSR042AWH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR042AWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR042AWH/chrombpnet_model_feb15_fold_1/full_ENCSR042AWH.profile.bigwig", "name": "ENCSR042AWH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR042AWH" ], "assay": "ATAC", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR470ZNM/preprocessing/bigWigs/ENCSR470ZNM.bigWig", "name": "ENCSR470ZNM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR470ZNM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03060", "biosample term name": "HG03060", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR470ZNM/chrombpnet_model_feb15_fold_1/ENCSR470ZNM_w_bias.bw", "name": "ENCSR470ZNM ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR470ZNM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03060", "biosample term name": "HG03060", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR470ZNM/chrombpnet_model_feb15_fold_1/ENCSR470ZNM_wo_bias.bw", "name": "ENCSR470ZNM ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR470ZNM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03060", "biosample term name": "HG03060", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR470ZNM/chrombpnet_model_feb15_fold_1/full_ENCSR470ZNM.counts.bigwig", "name": "ENCSR470ZNM ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR470ZNM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03060", "biosample term name": "HG03060", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR470ZNM/chrombpnet_model_feb15_fold_1/full_ENCSR470ZNM.profile.bigwig", "name": "ENCSR470ZNM ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR470ZNM" ], "assay": "ATAC", "biosample summary": "Homo sapiens HG03060", "biosample term name": "HG03060", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR415LEB/preprocessing/bigWigs/ENCSR415LEB.bigWig", "name": "ENCSR415LEB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR415LEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens jejunum tissue female adult (59 years)", "biosample term name": "jejunum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR415LEB/chrombpnet_model_feb15_fold_1/ENCSR415LEB_w_bias.bw", "name": "ENCSR415LEB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR415LEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens jejunum tissue female adult (59 years)", "biosample term name": "jejunum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR415LEB/chrombpnet_model_feb15_fold_1/ENCSR415LEB_wo_bias.bw", "name": "ENCSR415LEB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR415LEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens jejunum tissue female adult (59 years)", "biosample term name": "jejunum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR415LEB/chrombpnet_model_feb15_fold_1/full_ENCSR415LEB.counts.bigwig", "name": "ENCSR415LEB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR415LEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens jejunum tissue female adult (59 years)", "biosample term name": "jejunum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR415LEB/chrombpnet_model_feb15_fold_1/full_ENCSR415LEB.profile.bigwig", "name": "ENCSR415LEB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR415LEB" ], "assay": "ATAC", "biosample summary": "Homo sapiens jejunum tissue female adult (59 years)", "biosample term name": "jejunum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR619LHF/preprocessing/bigWigs/ENCSR619LHF.bigWig", "name": "ENCSR619LHF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR619LHF" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (47 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR619LHF/chrombpnet_model_feb15_fold_1/ENCSR619LHF_w_bias.bw", "name": "ENCSR619LHF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR619LHF" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (47 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR619LHF/chrombpnet_model_feb15_fold_1/ENCSR619LHF_wo_bias.bw", "name": "ENCSR619LHF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR619LHF" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (47 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR619LHF/chrombpnet_model_feb15_fold_1/full_ENCSR619LHF.counts.bigwig", "name": "ENCSR619LHF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR619LHF" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (47 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR619LHF/chrombpnet_model_feb15_fold_1/full_ENCSR619LHF.profile.bigwig", "name": "ENCSR619LHF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR619LHF" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (47 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR571JFO/preprocessing/bigWigs/ENCSR571JFO.bigWig", "name": "ENCSR571JFO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR571JFO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female child (16 years)", "biosample term name": "ovary", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR571JFO/chrombpnet_model_feb15_fold_1/ENCSR571JFO_w_bias.bw", "name": "ENCSR571JFO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR571JFO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female child (16 years)", "biosample term name": "ovary", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR571JFO/chrombpnet_model_feb15_fold_1/ENCSR571JFO_wo_bias.bw", "name": "ENCSR571JFO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR571JFO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female child (16 years)", "biosample term name": "ovary", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR571JFO/chrombpnet_model_feb15_fold_1/full_ENCSR571JFO.counts.bigwig", "name": "ENCSR571JFO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR571JFO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female child (16 years)", "biosample term name": "ovary", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR571JFO/chrombpnet_model_feb15_fold_1/full_ENCSR571JFO.profile.bigwig", "name": "ENCSR571JFO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR571JFO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female child (16 years)", "biosample term name": "ovary", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR736CIN/preprocessing/bigWigs/ENCSR736CIN.bigWig", "name": "ENCSR736CIN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR736CIN" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (66 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR736CIN/chrombpnet_model_feb15_fold_1/ENCSR736CIN_w_bias.bw", "name": "ENCSR736CIN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR736CIN" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (66 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR736CIN/chrombpnet_model_feb15_fold_1/ENCSR736CIN_wo_bias.bw", "name": "ENCSR736CIN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR736CIN" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (66 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR736CIN/chrombpnet_model_feb15_fold_1/full_ENCSR736CIN.counts.bigwig", "name": "ENCSR736CIN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR736CIN" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (66 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR736CIN/chrombpnet_model_feb15_fold_1/full_ENCSR736CIN.profile.bigwig", "name": "ENCSR736CIN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR736CIN" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue female adult (66 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR158KCS/preprocessing/bigWigs/ENCSR158KCS.bigWig", "name": "ENCSR158KCS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR158KCS" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158KCS/chrombpnet_model_feb15_fold_1/ENCSR158KCS_w_bias.bw", "name": "ENCSR158KCS ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR158KCS" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158KCS/chrombpnet_model_feb15_fold_1/ENCSR158KCS_wo_bias.bw", "name": "ENCSR158KCS ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR158KCS" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158KCS/chrombpnet_model_feb15_fold_1/full_ENCSR158KCS.counts.bigwig", "name": "ENCSR158KCS ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR158KCS" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR158KCS/chrombpnet_model_feb15_fold_1/full_ENCSR158KCS.profile.bigwig", "name": "ENCSR158KCS ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR158KCS" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR822BAD/preprocessing/bigWigs/ENCSR822BAD.bigWig", "name": "ENCSR822BAD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR822BAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR822BAD/chrombpnet_model_feb15_fold_1/ENCSR822BAD_w_bias.bw", "name": "ENCSR822BAD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR822BAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR822BAD/chrombpnet_model_feb15_fold_1/ENCSR822BAD_wo_bias.bw", "name": "ENCSR822BAD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR822BAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR822BAD/chrombpnet_model_feb15_fold_1/full_ENCSR822BAD.counts.bigwig", "name": "ENCSR822BAD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR822BAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR822BAD/chrombpnet_model_feb15_fold_1/full_ENCSR822BAD.profile.bigwig", "name": "ENCSR822BAD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR822BAD" ], "assay": "ATAC", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR694OWY/preprocessing/bigWigs/ENCSR694OWY.bigWig", "name": "ENCSR694OWY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR694OWY" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue male adult (26 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR694OWY/chrombpnet_model_feb15_fold_1/ENCSR694OWY_w_bias.bw", "name": "ENCSR694OWY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR694OWY" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue male adult (26 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR694OWY/chrombpnet_model_feb15_fold_1/ENCSR694OWY_wo_bias.bw", "name": "ENCSR694OWY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR694OWY" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue male adult (26 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR694OWY/chrombpnet_model_feb15_fold_1/full_ENCSR694OWY.counts.bigwig", "name": "ENCSR694OWY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR694OWY" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue male adult (26 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR694OWY/chrombpnet_model_feb15_fold_1/full_ENCSR694OWY.profile.bigwig", "name": "ENCSR694OWY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR694OWY" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue male adult (26 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR979TCG/preprocessing/bigWigs/ENCSR979TCG.bigWig", "name": "ENCSR979TCG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR979TCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (47 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR979TCG/chrombpnet_model_feb15_fold_1/ENCSR979TCG_w_bias.bw", "name": "ENCSR979TCG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR979TCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (47 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR979TCG/chrombpnet_model_feb15_fold_1/ENCSR979TCG_wo_bias.bw", "name": "ENCSR979TCG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR979TCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (47 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR979TCG/chrombpnet_model_feb15_fold_1/full_ENCSR979TCG.counts.bigwig", "name": "ENCSR979TCG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR979TCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (47 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR979TCG/chrombpnet_model_feb15_fold_1/full_ENCSR979TCG.profile.bigwig", "name": "ENCSR979TCG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR979TCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens spleen tissue female adult (47 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR260LAN/preprocessing/bigWigs/ENCSR260LAN.bigWig", "name": "ENCSR260LAN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR260LAN" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260LAN/chrombpnet_model_feb15_fold_1/ENCSR260LAN_w_bias.bw", "name": "ENCSR260LAN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR260LAN" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260LAN/chrombpnet_model_feb15_fold_1/ENCSR260LAN_wo_bias.bw", "name": "ENCSR260LAN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR260LAN" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260LAN/chrombpnet_model_feb15_fold_1/full_ENCSR260LAN.counts.bigwig", "name": "ENCSR260LAN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR260LAN" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR260LAN/chrombpnet_model_feb15_fold_1/full_ENCSR260LAN.profile.bigwig", "name": "ENCSR260LAN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR260LAN" ], "assay": "ATAC", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR451JSB/preprocessing/bigWigs/ENCSR451JSB.bigWig", "name": "ENCSR451JSB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR451JSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR451JSB/chrombpnet_model_feb15_fold_1/ENCSR451JSB_w_bias.bw", "name": "ENCSR451JSB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR451JSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR451JSB/chrombpnet_model_feb15_fold_1/ENCSR451JSB_wo_bias.bw", "name": "ENCSR451JSB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR451JSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR451JSB/chrombpnet_model_feb15_fold_1/full_ENCSR451JSB.counts.bigwig", "name": "ENCSR451JSB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR451JSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR451JSB/chrombpnet_model_feb15_fold_1/full_ENCSR451JSB.profile.bigwig", "name": "ENCSR451JSB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR451JSB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR548SSP/preprocessing/bigWigs/ENCSR548SSP.bigWig", "name": "ENCSR548SSP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR548SSP" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue female adult (47 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548SSP/chrombpnet_model_feb15_fold_1/ENCSR548SSP_w_bias.bw", "name": "ENCSR548SSP ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548SSP" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue female adult (47 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548SSP/chrombpnet_model_feb15_fold_1/ENCSR548SSP_wo_bias.bw", "name": "ENCSR548SSP ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548SSP" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue female adult (47 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548SSP/chrombpnet_model_feb15_fold_1/full_ENCSR548SSP.counts.bigwig", "name": "ENCSR548SSP ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548SSP" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue female adult (47 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR548SSP/chrombpnet_model_feb15_fold_1/full_ENCSR548SSP.profile.bigwig", "name": "ENCSR548SSP ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548SSP" ], "assay": "ATAC", "biosample summary": "Homo sapiens mucosa of urinary bladder tissue female adult (47 years)", "biosample term name": "mucosa of urinary bladder", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR946MAI/preprocessing/bigWigs/ENCSR946MAI.bigWig", "name": "ENCSR946MAI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR946MAI" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR946MAI/chrombpnet_model_feb15_fold_1/ENCSR946MAI_w_bias.bw", "name": "ENCSR946MAI ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR946MAI" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR946MAI/chrombpnet_model_feb15_fold_1/ENCSR946MAI_wo_bias.bw", "name": "ENCSR946MAI ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR946MAI" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR946MAI/chrombpnet_model_feb15_fold_1/full_ENCSR946MAI.counts.bigwig", "name": "ENCSR946MAI ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR946MAI" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR946MAI/chrombpnet_model_feb15_fold_1/full_ENCSR946MAI.profile.bigwig", "name": "ENCSR946MAI ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR946MAI" ], "assay": "ATAC", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR895SEG/preprocessing/bigWigs/ENCSR895SEG.bigWig", "name": "ENCSR895SEG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR895SEG" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (60 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR895SEG/chrombpnet_model_feb15_fold_1/ENCSR895SEG_w_bias.bw", "name": "ENCSR895SEG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895SEG" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (60 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR895SEG/chrombpnet_model_feb15_fold_1/ENCSR895SEG_wo_bias.bw", "name": "ENCSR895SEG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895SEG" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (60 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR895SEG/chrombpnet_model_feb15_fold_1/full_ENCSR895SEG.counts.bigwig", "name": "ENCSR895SEG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895SEG" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (60 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR895SEG/chrombpnet_model_feb15_fold_1/full_ENCSR895SEG.profile.bigwig", "name": "ENCSR895SEG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895SEG" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (60 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR814RGG/preprocessing/bigWigs/ENCSR814RGG.bigWig", "name": "ENCSR814RGG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR814RGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ureter tissue female adult (47 years)", "biosample term name": "ureter", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR814RGG/chrombpnet_model_feb15_fold_1/ENCSR814RGG_w_bias.bw", "name": "ENCSR814RGG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR814RGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ureter tissue female adult (47 years)", "biosample term name": "ureter", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR814RGG/chrombpnet_model_feb15_fold_1/ENCSR814RGG_wo_bias.bw", "name": "ENCSR814RGG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR814RGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ureter tissue female adult (47 years)", "biosample term name": "ureter", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR814RGG/chrombpnet_model_feb15_fold_1/full_ENCSR814RGG.counts.bigwig", "name": "ENCSR814RGG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR814RGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ureter tissue female adult (47 years)", "biosample term name": "ureter", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR814RGG/chrombpnet_model_feb15_fold_1/full_ENCSR814RGG.profile.bigwig", "name": "ENCSR814RGG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR814RGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens ureter tissue female adult (47 years)", "biosample term name": "ureter", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR019XCN/preprocessing/bigWigs/ENCSR019XCN.bigWig", "name": "ENCSR019XCN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR019XCN" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR019XCN/chrombpnet_model_feb15_fold_1/ENCSR019XCN_w_bias.bw", "name": "ENCSR019XCN ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR019XCN" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR019XCN/chrombpnet_model_feb15_fold_1/ENCSR019XCN_wo_bias.bw", "name": "ENCSR019XCN ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR019XCN" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR019XCN/chrombpnet_model_feb15_fold_1/full_ENCSR019XCN.counts.bigwig", "name": "ENCSR019XCN ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR019XCN" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR019XCN/chrombpnet_model_feb15_fold_1/full_ENCSR019XCN.profile.bigwig", "name": "ENCSR019XCN ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR019XCN" ], "assay": "ATAC", "biosample summary": "Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR165FYY/preprocessing/bigWigs/ENCSR165FYY.bigWig", "name": "ENCSR165FYY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR165FYY" ], "assay": "ATAC", "biosample summary": "Homo sapiens central memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "central memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR165FYY/chrombpnet_model_feb15_fold_1/ENCSR165FYY_w_bias.bw", "name": "ENCSR165FYY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR165FYY" ], "assay": "ATAC", "biosample summary": "Homo sapiens central memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "central memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR165FYY/chrombpnet_model_feb15_fold_1/ENCSR165FYY_wo_bias.bw", "name": "ENCSR165FYY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR165FYY" ], "assay": "ATAC", "biosample summary": "Homo sapiens central memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "central memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR165FYY/chrombpnet_model_feb15_fold_1/full_ENCSR165FYY.counts.bigwig", "name": "ENCSR165FYY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR165FYY" ], "assay": "ATAC", "biosample summary": "Homo sapiens central memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "central memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR165FYY/chrombpnet_model_feb15_fold_1/full_ENCSR165FYY.profile.bigwig", "name": "ENCSR165FYY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR165FYY" ], "assay": "ATAC", "biosample summary": "Homo sapiens central memory CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "central memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR872MAO/preprocessing/bigWigs/ENCSR872MAO.bigWig", "name": "ENCSR872MAO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR872MAO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872MAO/chrombpnet_model_feb15_fold_1/ENCSR872MAO_w_bias.bw", "name": "ENCSR872MAO ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR872MAO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872MAO/chrombpnet_model_feb15_fold_1/ENCSR872MAO_wo_bias.bw", "name": "ENCSR872MAO ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR872MAO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872MAO/chrombpnet_model_feb15_fold_1/full_ENCSR872MAO.counts.bigwig", "name": "ENCSR872MAO ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR872MAO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR872MAO/chrombpnet_model_feb15_fold_1/full_ENCSR872MAO.profile.bigwig", "name": "ENCSR872MAO ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR872MAO" ], "assay": "ATAC", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR653ZWW/preprocessing/bigWigs/ENCSR653ZWW.bigWig", "name": "ENCSR653ZWW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR653ZWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (47 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653ZWW/chrombpnet_model_feb15_fold_1/ENCSR653ZWW_w_bias.bw", "name": "ENCSR653ZWW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR653ZWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (47 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653ZWW/chrombpnet_model_feb15_fold_1/ENCSR653ZWW_wo_bias.bw", "name": "ENCSR653ZWW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR653ZWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (47 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653ZWW/chrombpnet_model_feb15_fold_1/full_ENCSR653ZWW.counts.bigwig", "name": "ENCSR653ZWW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR653ZWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (47 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR653ZWW/chrombpnet_model_feb15_fold_1/full_ENCSR653ZWW.profile.bigwig", "name": "ENCSR653ZWW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR653ZWW" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (47 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR593YFB/preprocessing/bigWigs/ENCSR593YFB.bigWig", "name": "ENCSR593YFB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR593YFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (42 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR593YFB/chrombpnet_model_feb15_fold_1/ENCSR593YFB_w_bias.bw", "name": "ENCSR593YFB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR593YFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (42 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR593YFB/chrombpnet_model_feb15_fold_1/ENCSR593YFB_wo_bias.bw", "name": "ENCSR593YFB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR593YFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (42 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR593YFB/chrombpnet_model_feb15_fold_1/full_ENCSR593YFB.counts.bigwig", "name": "ENCSR593YFB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR593YFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (42 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR593YFB/chrombpnet_model_feb15_fold_1/full_ENCSR593YFB.profile.bigwig", "name": "ENCSR593YFB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR593YFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (42 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR841LHT/preprocessing/bigWigs/ENCSR841LHT.bigWig", "name": "ENCSR841LHT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR841LHT" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR841LHT/chrombpnet_model_feb15_fold_1/ENCSR841LHT_w_bias.bw", "name": "ENCSR841LHT ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR841LHT" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR841LHT/chrombpnet_model_feb15_fold_1/ENCSR841LHT_wo_bias.bw", "name": "ENCSR841LHT ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR841LHT" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR841LHT/chrombpnet_model_feb15_fold_1/full_ENCSR841LHT.counts.bigwig", "name": "ENCSR841LHT ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR841LHT" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR841LHT/chrombpnet_model_feb15_fold_1/full_ENCSR841LHT.profile.bigwig", "name": "ENCSR841LHT ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR841LHT" ], "assay": "ATAC", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR848TMJ/preprocessing/bigWigs/ENCSR848TMJ.bigWig", "name": "ENCSR848TMJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR848TMJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR848TMJ/chrombpnet_model_feb15_fold_1/ENCSR848TMJ_w_bias.bw", "name": "ENCSR848TMJ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR848TMJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR848TMJ/chrombpnet_model_feb15_fold_1/ENCSR848TMJ_wo_bias.bw", "name": "ENCSR848TMJ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR848TMJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR848TMJ/chrombpnet_model_feb15_fold_1/full_ENCSR848TMJ.counts.bigwig", "name": "ENCSR848TMJ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR848TMJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR848TMJ/chrombpnet_model_feb15_fold_1/full_ENCSR848TMJ.profile.bigwig", "name": "ENCSR848TMJ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR848TMJ" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR705RZX/preprocessing/bigWigs/ENCSR705RZX.bigWig", "name": "ENCSR705RZX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR705RZX" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (46 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705RZX/chrombpnet_model_feb15_fold_1/ENCSR705RZX_w_bias.bw", "name": "ENCSR705RZX ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR705RZX" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (46 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705RZX/chrombpnet_model_feb15_fold_1/ENCSR705RZX_wo_bias.bw", "name": "ENCSR705RZX ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR705RZX" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (46 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705RZX/chrombpnet_model_feb15_fold_1/full_ENCSR705RZX.counts.bigwig", "name": "ENCSR705RZX ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR705RZX" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (46 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR705RZX/chrombpnet_model_feb15_fold_1/full_ENCSR705RZX.profile.bigwig", "name": "ENCSR705RZX ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR705RZX" ], "assay": "ATAC", "biosample summary": "Homo sapiens uterus tissue female adult (46 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR124NNL/preprocessing/bigWigs/ENCSR124NNL.bigWig", "name": "ENCSR124NNL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR124NNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens liver tissue male adult (67 years)", "biosample term name": "liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR124NNL/chrombpnet_model_feb15_fold_1/ENCSR124NNL_w_bias.bw", "name": "ENCSR124NNL ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR124NNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens liver tissue male adult (67 years)", "biosample term name": "liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR124NNL/chrombpnet_model_feb15_fold_1/ENCSR124NNL_wo_bias.bw", "name": "ENCSR124NNL ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR124NNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens liver tissue male adult (67 years)", "biosample term name": "liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR124NNL/chrombpnet_model_feb15_fold_1/full_ENCSR124NNL.counts.bigwig", "name": "ENCSR124NNL ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR124NNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens liver tissue male adult (67 years)", "biosample term name": "liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR124NNL/chrombpnet_model_feb15_fold_1/full_ENCSR124NNL.profile.bigwig", "name": "ENCSR124NNL ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR124NNL" ], "assay": "ATAC", "biosample summary": "Homo sapiens liver tissue male adult (67 years)", "biosample term name": "liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR330WUK/preprocessing/bigWigs/ENCSR330WUK.bigWig", "name": "ENCSR330WUK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR330WUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (60 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR330WUK/chrombpnet_model_feb15_fold_1/ENCSR330WUK_w_bias.bw", "name": "ENCSR330WUK ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR330WUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (60 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR330WUK/chrombpnet_model_feb15_fold_1/ENCSR330WUK_wo_bias.bw", "name": "ENCSR330WUK ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR330WUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (60 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR330WUK/chrombpnet_model_feb15_fold_1/full_ENCSR330WUK.counts.bigwig", "name": "ENCSR330WUK ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR330WUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (60 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR330WUK/chrombpnet_model_feb15_fold_1/full_ENCSR330WUK.profile.bigwig", "name": "ENCSR330WUK ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR330WUK" ], "assay": "ATAC", "biosample summary": "Homo sapiens left cardiac atrium tissue male adult (60 years)", "biosample term name": "left cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR167SYF/preprocessing/bigWigs/ENCSR167SYF.bigWig", "name": "ENCSR167SYF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR167SYF" ], "assay": "ATAC", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR167SYF/chrombpnet_model_feb15_fold_1/ENCSR167SYF_w_bias.bw", "name": "ENCSR167SYF ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR167SYF" ], "assay": "ATAC", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR167SYF/chrombpnet_model_feb15_fold_1/ENCSR167SYF_wo_bias.bw", "name": "ENCSR167SYF ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR167SYF" ], "assay": "ATAC", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR167SYF/chrombpnet_model_feb15_fold_1/full_ENCSR167SYF.counts.bigwig", "name": "ENCSR167SYF ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR167SYF" ], "assay": "ATAC", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR167SYF/chrombpnet_model_feb15_fold_1/full_ENCSR167SYF.profile.bigwig", "name": "ENCSR167SYF ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR167SYF" ], "assay": "ATAC", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR533WFB/preprocessing/bigWigs/ENCSR533WFB.bigWig", "name": "ENCSR533WFB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR533WFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (41 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR533WFB/chrombpnet_model_feb15_fold_1/ENCSR533WFB_w_bias.bw", "name": "ENCSR533WFB ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR533WFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (41 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR533WFB/chrombpnet_model_feb15_fold_1/ENCSR533WFB_wo_bias.bw", "name": "ENCSR533WFB ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR533WFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (41 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR533WFB/chrombpnet_model_feb15_fold_1/full_ENCSR533WFB.counts.bigwig", "name": "ENCSR533WFB ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR533WFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (41 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR533WFB/chrombpnet_model_feb15_fold_1/full_ENCSR533WFB.profile.bigwig", "name": "ENCSR533WFB ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR533WFB" ], "assay": "ATAC", "biosample summary": "Homo sapiens sciatic nerve tissue female adult (41 years)", "biosample term name": "sciatic nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR565DSD/preprocessing/bigWigs/ENCSR565DSD.bigWig", "name": "ENCSR565DSD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR565DSD" ], "assay": "ATAC", "biosample summary": "Homo sapiens fallopian tube tissue female adult (61 years)", "biosample term name": "fallopian tube", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR565DSD/chrombpnet_model_feb15_fold_1/ENCSR565DSD_w_bias.bw", "name": "ENCSR565DSD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR565DSD" ], "assay": "ATAC", "biosample summary": "Homo sapiens fallopian tube tissue female adult (61 years)", "biosample term name": "fallopian tube", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR565DSD/chrombpnet_model_feb15_fold_1/ENCSR565DSD_wo_bias.bw", "name": "ENCSR565DSD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR565DSD" ], "assay": "ATAC", "biosample summary": "Homo sapiens fallopian tube tissue female adult (61 years)", "biosample term name": "fallopian tube", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR565DSD/chrombpnet_model_feb15_fold_1/full_ENCSR565DSD.counts.bigwig", "name": "ENCSR565DSD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR565DSD" ], "assay": "ATAC", "biosample summary": "Homo sapiens fallopian tube tissue female adult (61 years)", "biosample term name": "fallopian tube", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR565DSD/chrombpnet_model_feb15_fold_1/full_ENCSR565DSD.profile.bigwig", "name": "ENCSR565DSD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR565DSD" ], "assay": "ATAC", "biosample summary": "Homo sapiens fallopian tube tissue female adult (61 years)", "biosample term name": "fallopian tube", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR295TFY/preprocessing/bigWigs/ENCSR295TFY.bigWig", "name": "ENCSR295TFY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR295TFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens aorta tissue female child (16 years)", "biosample term name": "aorta", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR295TFY/chrombpnet_model_feb15_fold_1/ENCSR295TFY_w_bias.bw", "name": "ENCSR295TFY ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR295TFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens aorta tissue female child (16 years)", "biosample term name": "aorta", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR295TFY/chrombpnet_model_feb15_fold_1/ENCSR295TFY_wo_bias.bw", "name": "ENCSR295TFY ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR295TFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens aorta tissue female child (16 years)", "biosample term name": "aorta", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR295TFY/chrombpnet_model_feb15_fold_1/full_ENCSR295TFY.counts.bigwig", "name": "ENCSR295TFY ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR295TFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens aorta tissue female child (16 years)", "biosample term name": "aorta", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR295TFY/chrombpnet_model_feb15_fold_1/full_ENCSR295TFY.profile.bigwig", "name": "ENCSR295TFY ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR295TFY" ], "assay": "ATAC", "biosample summary": "Homo sapiens aorta tissue female child (16 years)", "biosample term name": "aorta", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR863TVR/preprocessing/bigWigs/ENCSR863TVR.bigWig", "name": "ENCSR863TVR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR863TVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR863TVR/chrombpnet_model_feb15_fold_1/ENCSR863TVR_w_bias.bw", "name": "ENCSR863TVR ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR863TVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR863TVR/chrombpnet_model_feb15_fold_1/ENCSR863TVR_wo_bias.bw", "name": "ENCSR863TVR ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR863TVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR863TVR/chrombpnet_model_feb15_fold_1/full_ENCSR863TVR.counts.bigwig", "name": "ENCSR863TVR ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR863TVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR863TVR/chrombpnet_model_feb15_fold_1/full_ENCSR863TVR.profile.bigwig", "name": "ENCSR863TVR ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR863TVR" ], "assay": "ATAC", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR745CGG/preprocessing/bigWigs/ENCSR745CGG.bigWig", "name": "ENCSR745CGG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR745CGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR745CGG/chrombpnet_model_feb15_fold_1/ENCSR745CGG_w_bias.bw", "name": "ENCSR745CGG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR745CGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR745CGG/chrombpnet_model_feb15_fold_1/ENCSR745CGG_wo_bias.bw", "name": "ENCSR745CGG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR745CGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR745CGG/chrombpnet_model_feb15_fold_1/full_ENCSR745CGG.counts.bigwig", "name": "ENCSR745CGG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR745CGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR745CGG/chrombpnet_model_feb15_fold_1/full_ENCSR745CGG.profile.bigwig", "name": "ENCSR745CGG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR745CGG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR213DBU/preprocessing/bigWigs/ENCSR213DBU.bigWig", "name": "ENCSR213DBU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR213DBU" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue male adult (26 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213DBU/chrombpnet_model_feb15_fold_1/ENCSR213DBU_w_bias.bw", "name": "ENCSR213DBU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR213DBU" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue male adult (26 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213DBU/chrombpnet_model_feb15_fold_1/ENCSR213DBU_wo_bias.bw", "name": "ENCSR213DBU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR213DBU" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue male adult (26 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213DBU/chrombpnet_model_feb15_fold_1/full_ENCSR213DBU.counts.bigwig", "name": "ENCSR213DBU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR213DBU" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue male adult (26 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR213DBU/chrombpnet_model_feb15_fold_1/full_ENCSR213DBU.profile.bigwig", "name": "ENCSR213DBU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR213DBU" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue male adult (26 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR327DCG/preprocessing/bigWigs/ENCSR327DCG.bigWig", "name": "ENCSR327DCG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR327DCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR327DCG/chrombpnet_model_feb15_fold_1/ENCSR327DCG_w_bias.bw", "name": "ENCSR327DCG ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR327DCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR327DCG/chrombpnet_model_feb15_fold_1/ENCSR327DCG_wo_bias.bw", "name": "ENCSR327DCG ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR327DCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR327DCG/chrombpnet_model_feb15_fold_1/full_ENCSR327DCG.counts.bigwig", "name": "ENCSR327DCG ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR327DCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR327DCG/chrombpnet_model_feb15_fold_1/full_ENCSR327DCG.profile.bigwig", "name": "ENCSR327DCG ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR327DCG" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (46 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR242QRV/preprocessing/bigWigs/ENCSR242QRV.bigWig", "name": "ENCSR242QRV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR242QRV" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR242QRV/chrombpnet_model_feb15_fold_1/ENCSR242QRV_w_bias.bw", "name": "ENCSR242QRV ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR242QRV" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR242QRV/chrombpnet_model_feb15_fold_1/ENCSR242QRV_wo_bias.bw", "name": "ENCSR242QRV ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR242QRV" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR242QRV/chrombpnet_model_feb15_fold_1/full_ENCSR242QRV.counts.bigwig", "name": "ENCSR242QRV ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR242QRV" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR242QRV/chrombpnet_model_feb15_fold_1/full_ENCSR242QRV.profile.bigwig", "name": "ENCSR242QRV ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR242QRV" ], "assay": "ATAC", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR174MLD/preprocessing/bigWigs/ENCSR174MLD.bigWig", "name": "ENCSR174MLD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR174MLD" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (41 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174MLD/chrombpnet_model_feb15_fold_1/ENCSR174MLD_w_bias.bw", "name": "ENCSR174MLD ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR174MLD" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (41 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174MLD/chrombpnet_model_feb15_fold_1/ENCSR174MLD_wo_bias.bw", "name": "ENCSR174MLD ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR174MLD" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (41 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174MLD/chrombpnet_model_feb15_fold_1/full_ENCSR174MLD.counts.bigwig", "name": "ENCSR174MLD ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR174MLD" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (41 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR174MLD/chrombpnet_model_feb15_fold_1/full_ENCSR174MLD.profile.bigwig", "name": "ENCSR174MLD ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR174MLD" ], "assay": "ATAC", "biosample summary": "Homo sapiens bile duct tissue female adult (41 years)", "biosample term name": "bile duct", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR297VGU/preprocessing/bigWigs/ENCSR297VGU.bigWig", "name": "ENCSR297VGU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR297VGU" ], "assay": "ATAC", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR297VGU/chrombpnet_model_feb15_fold_1/ENCSR297VGU_w_bias.bw", "name": "ENCSR297VGU ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR297VGU" ], "assay": "ATAC", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR297VGU/chrombpnet_model_feb15_fold_1/ENCSR297VGU_wo_bias.bw", "name": "ENCSR297VGU ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR297VGU" ], "assay": "ATAC", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR297VGU/chrombpnet_model_feb15_fold_1/full_ENCSR297VGU.counts.bigwig", "name": "ENCSR297VGU ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR297VGU" ], "assay": "ATAC", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR297VGU/chrombpnet_model_feb15_fold_1/full_ENCSR297VGU.profile.bigwig", "name": "ENCSR297VGU ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR297VGU" ], "assay": "ATAC", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR225FZH/preprocessing/bigWigs/ENCSR225FZH.bigWig", "name": "ENCSR225FZH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR225FZH" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (55 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR225FZH/chrombpnet_model_feb15_fold_1/ENCSR225FZH_w_bias.bw", "name": "ENCSR225FZH ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR225FZH" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (55 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR225FZH/chrombpnet_model_feb15_fold_1/ENCSR225FZH_wo_bias.bw", "name": "ENCSR225FZH ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR225FZH" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (55 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR225FZH/chrombpnet_model_feb15_fold_1/full_ENCSR225FZH.counts.bigwig", "name": "ENCSR225FZH ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR225FZH" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (55 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR225FZH/chrombpnet_model_feb15_fold_1/full_ENCSR225FZH.profile.bigwig", "name": "ENCSR225FZH ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR225FZH" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (55 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR374ZRW/preprocessing/bigWigs/ENCSR374ZRW.bigWig", "name": "ENCSR374ZRW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR374ZRW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR374ZRW/chrombpnet_model_feb15_fold_1/ENCSR374ZRW_w_bias.bw", "name": "ENCSR374ZRW ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR374ZRW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR374ZRW/chrombpnet_model_feb15_fold_1/ENCSR374ZRW_wo_bias.bw", "name": "ENCSR374ZRW ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR374ZRW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR374ZRW/chrombpnet_model_feb15_fold_1/full_ENCSR374ZRW.counts.bigwig", "name": "ENCSR374ZRW ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR374ZRW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR374ZRW/chrombpnet_model_feb15_fold_1/full_ENCSR374ZRW.profile.bigwig", "name": "ENCSR374ZRW ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR374ZRW" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR913FZQ/preprocessing/bigWigs/ENCSR913FZQ.bigWig", "name": "ENCSR913FZQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR913FZQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female child (16 years)", "biosample term name": "posterior vena cava", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR913FZQ/chrombpnet_model_feb15_fold_1/ENCSR913FZQ_w_bias.bw", "name": "ENCSR913FZQ ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR913FZQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female child (16 years)", "biosample term name": "posterior vena cava", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR913FZQ/chrombpnet_model_feb15_fold_1/ENCSR913FZQ_wo_bias.bw", "name": "ENCSR913FZQ ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR913FZQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female child (16 years)", "biosample term name": "posterior vena cava", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR913FZQ/chrombpnet_model_feb15_fold_1/full_ENCSR913FZQ.counts.bigwig", "name": "ENCSR913FZQ ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR913FZQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female child (16 years)", "biosample term name": "posterior vena cava", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR913FZQ/chrombpnet_model_feb15_fold_1/full_ENCSR913FZQ.profile.bigwig", "name": "ENCSR913FZQ ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR913FZQ" ], "assay": "ATAC", "biosample summary": "Homo sapiens posterior vena cava tissue female child (16 years)", "biosample term name": "posterior vena cava", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/ATAC/ENCSR204PZT/preprocessing/bigWigs/ENCSR204PZT.bigWig", "name": "ENCSR204PZT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR204PZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (41 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204PZT/chrombpnet_model_feb15_fold_1/ENCSR204PZT_w_bias.bw", "name": "ENCSR204PZT ATAC uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR204PZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (41 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204PZT/chrombpnet_model_feb15_fold_1/ENCSR204PZT_wo_bias.bw", "name": "ENCSR204PZT ATAC corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR204PZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (41 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204PZT/chrombpnet_model_feb15_fold_1/full_ENCSR204PZT.counts.bigwig", "name": "ENCSR204PZT ATAC corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR204PZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (41 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/ATAC/ENCSR204PZT/chrombpnet_model_feb15_fold_1/full_ENCSR204PZT.profile.bigwig", "name": "ENCSR204PZT ATAC corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR204PZT" ], "assay": "ATAC", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (41 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR362ZFC/preprocessing/bigWigs/ENCSR362ZFC.bigWig", "name": "ENCSR362ZFC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR362ZFC" ], "assay": "DNASE", "biosample summary": "Homo sapiens type B pancreatic cell", "biosample term name": "type B pancreatic cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR362ZFC/ENCSR362ZFC_w_bias.bw", "name": "ENCSR362ZFC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR362ZFC" ], "assay": "DNASE", "biosample summary": "Homo sapiens type B pancreatic cell", "biosample term name": "type B pancreatic cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR362ZFC/ENCSR362ZFC_wo_bias.bw", "name": "ENCSR362ZFC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR362ZFC" ], "assay": "DNASE", "biosample summary": "Homo sapiens type B pancreatic cell", "biosample term name": "type B pancreatic cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR362ZFC/full_ENCSR362ZFC.counts.bigwig", "name": "ENCSR362ZFC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR362ZFC" ], "assay": "DNASE", "biosample summary": "Homo sapiens type B pancreatic cell", "biosample term name": "type B pancreatic cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR362ZFC/full_ENCSR362ZFC.profile.bigwig", "name": "ENCSR362ZFC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR362ZFC" ], "assay": "DNASE", "biosample summary": "Homo sapiens type B pancreatic cell", "biosample term name": "type B pancreatic cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR383BLX/preprocessing/bigWigs/ENCSR383BLX.bigWig", "name": "ENCSR383BLX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR383BLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383BLX/ENCSR383BLX_w_bias.bw", "name": "ENCSR383BLX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR383BLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383BLX/ENCSR383BLX_wo_bias.bw", "name": "ENCSR383BLX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR383BLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right biceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383BLX/full_ENCSR383BLX.counts.bigwig", "name": "ENCSR383BLX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR383BLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right biceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383BLX/full_ENCSR383BLX.profile.bigwig", "name": "ENCSR383BLX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR383BLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR325LYJ/preprocessing/bigWigs/ENCSR325LYJ.bigWig", "name": "ENCSR325LYJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR325LYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR325LYJ/ENCSR325LYJ_w_bias.bw", "name": "ENCSR325LYJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR325LYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR325LYJ/ENCSR325LYJ_wo_bias.bw", "name": "ENCSR325LYJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR325LYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR325LYJ/full_ENCSR325LYJ.counts.bigwig", "name": "ENCSR325LYJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR325LYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR325LYJ/full_ENCSR325LYJ.profile.bigwig", "name": "ENCSR325LYJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR325LYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR622TWS/preprocessing/bigWigs/ENCSR622TWS.bigWig", "name": "ENCSR622TWS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR622TWS" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622TWS/ENCSR622TWS_w_bias.bw", "name": "ENCSR622TWS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR622TWS" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622TWS/ENCSR622TWS_wo_bias.bw", "name": "ENCSR622TWS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR622TWS" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622TWS/full_ENCSR622TWS.counts.bigwig", "name": "ENCSR622TWS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR622TWS" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622TWS/full_ENCSR622TWS.profile.bigwig", "name": "ENCSR622TWS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR622TWS" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR593LTJ/preprocessing/bigWigs/ENCSR593LTJ.bigWig", "name": "ENCSR593LTJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR593LTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (17 weeks) and embryo (18 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593LTJ/ENCSR593LTJ_w_bias.bw", "name": "ENCSR593LTJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR593LTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (17 weeks) and embryo (18 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593LTJ/ENCSR593LTJ_wo_bias.bw", "name": "ENCSR593LTJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR593LTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (17 weeks) and embryo (18 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593LTJ/full_ENCSR593LTJ.counts.bigwig", "name": "ENCSR593LTJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR593LTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (17 weeks) and embryo (18 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593LTJ/full_ENCSR593LTJ.profile.bigwig", "name": "ENCSR593LTJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR593LTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (17 weeks) and embryo (18 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR636DIR/preprocessing/bigWigs/ENCSR636DIR.bigWig", "name": "ENCSR636DIR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR636DIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 1 cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 30 ng/mL Interleukin-12 subunit beta for 36 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 1 \u03bcg/mL Interleukin-4 antibody for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours", "biosample term name": "activated T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR636DIR/ENCSR636DIR_w_bias.bw", "name": "ENCSR636DIR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR636DIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 1 cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 30 ng/mL Interleukin-12 subunit beta for 36 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 1 \u03bcg/mL Interleukin-4 antibody for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours", "biosample term name": "activated T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR636DIR/ENCSR636DIR_wo_bias.bw", "name": "ENCSR636DIR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR636DIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 1 cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 30 ng/mL Interleukin-12 subunit beta for 36 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 1 \u03bcg/mL Interleukin-4 antibody for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours", "biosample term name": "activated T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR636DIR/full_ENCSR636DIR.counts.bigwig", "name": "ENCSR636DIR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR636DIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 1 cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 30 ng/mL Interleukin-12 subunit beta for 36 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 1 \u03bcg/mL Interleukin-4 antibody for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours", "biosample term name": "activated T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR636DIR/full_ENCSR636DIR.profile.bigwig", "name": "ENCSR636DIR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR636DIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 1 cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 30 ng/mL Interleukin-12 subunit beta for 36 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 1 \u03bcg/mL Interleukin-4 antibody for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours", "biosample term name": "activated T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR208YDK/preprocessing/bigWigs/ENCSR208YDK.bigWig", "name": "ENCSR208YDK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR208YDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208YDK/ENCSR208YDK_w_bias.bw", "name": "ENCSR208YDK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR208YDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208YDK/ENCSR208YDK_wo_bias.bw", "name": "ENCSR208YDK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR208YDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208YDK/full_ENCSR208YDK.counts.bigwig", "name": "ENCSR208YDK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR208YDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208YDK/full_ENCSR208YDK.profile.bigwig", "name": "ENCSR208YDK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR208YDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR817ALC/preprocessing/bigWigs/ENCSR817ALC.bigWig", "name": "ENCSR817ALC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR817ALC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mammary epithelial cell female adult (19 years)", "biosample term name": "mammary epithelial cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR817ALC/ENCSR817ALC_w_bias.bw", "name": "ENCSR817ALC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR817ALC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mammary epithelial cell female adult (19 years)", "biosample term name": "mammary epithelial cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR817ALC/ENCSR817ALC_wo_bias.bw", "name": "ENCSR817ALC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR817ALC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mammary epithelial cell female adult (19 years)", "biosample term name": "mammary epithelial cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR817ALC/full_ENCSR817ALC.counts.bigwig", "name": "ENCSR817ALC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR817ALC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mammary epithelial cell female adult (19 years)", "biosample term name": "mammary epithelial cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR817ALC/full_ENCSR817ALC.profile.bigwig", "name": "ENCSR817ALC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR817ALC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mammary epithelial cell female adult (19 years)", "biosample term name": "mammary epithelial cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR229BGG/preprocessing/bigWigs/ENCSR229BGG.bigWig", "name": "ENCSR229BGG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR229BGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR229BGG/ENCSR229BGG_w_bias.bw", "name": "ENCSR229BGG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR229BGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR229BGG/ENCSR229BGG_wo_bias.bw", "name": "ENCSR229BGG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR229BGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR229BGG/full_ENCSR229BGG.counts.bigwig", "name": "ENCSR229BGG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR229BGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR229BGG/full_ENCSR229BGG.profile.bigwig", "name": "ENCSR229BGG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR229BGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell male adult (40 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR566VAK/preprocessing/bigWigs/ENCSR566VAK.bigWig", "name": "ENCSR566VAK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR566VAK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566VAK/ENCSR566VAK_w_bias.bw", "name": "ENCSR566VAK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR566VAK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566VAK/ENCSR566VAK_wo_bias.bw", "name": "ENCSR566VAK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR566VAK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566VAK/full_ENCSR566VAK.counts.bigwig", "name": "ENCSR566VAK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR566VAK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566VAK/full_ENCSR566VAK.profile.bigwig", "name": "ENCSR566VAK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR566VAK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR102RSU/preprocessing/bigWigs/ENCSR102RSU.bigWig", "name": "ENCSR102RSU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR102RSU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial artery tissue male adult (37 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR102RSU/ENCSR102RSU_w_bias.bw", "name": "ENCSR102RSU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR102RSU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial artery tissue male adult (37 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR102RSU/ENCSR102RSU_wo_bias.bw", "name": "ENCSR102RSU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR102RSU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial artery tissue male adult (37 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR102RSU/full_ENCSR102RSU.counts.bigwig", "name": "ENCSR102RSU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR102RSU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial artery tissue male adult (37 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR102RSU/full_ENCSR102RSU.profile.bigwig", "name": "ENCSR102RSU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR102RSU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial artery tissue male adult (37 years)", "biosample term name": "tibial artery", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR999VDH/preprocessing/bigWigs/ENCSR999VDH.bigWig", "name": "ENCSR999VDH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR999VDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR999VDH/ENCSR999VDH_w_bias.bw", "name": "ENCSR999VDH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR999VDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR999VDH/ENCSR999VDH_wo_bias.bw", "name": "ENCSR999VDH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR999VDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR999VDH/full_ENCSR999VDH.counts.bigwig", "name": "ENCSR999VDH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR999VDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR999VDH/full_ENCSR999VDH.profile.bigwig", "name": "ENCSR999VDH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR999VDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (59 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR828FVZ/preprocessing/bigWigs/ENCSR828FVZ.bigWig", "name": "ENCSR828FVZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR828FVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR828FVZ/ENCSR828FVZ_w_bias.bw", "name": "ENCSR828FVZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR828FVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR828FVZ/ENCSR828FVZ_wo_bias.bw", "name": "ENCSR828FVZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR828FVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR828FVZ/full_ENCSR828FVZ.counts.bigwig", "name": "ENCSR828FVZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR828FVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR828FVZ/full_ENCSR828FVZ.profile.bigwig", "name": "ENCSR828FVZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR828FVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (53 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR212VEN/preprocessing/bigWigs/ENCSR212VEN.bigWig", "name": "ENCSR212VEN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR212VEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR212VEN/ENCSR212VEN_w_bias.bw", "name": "ENCSR212VEN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR212VEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR212VEN/ENCSR212VEN_wo_bias.bw", "name": "ENCSR212VEN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR212VEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR212VEN/full_ENCSR212VEN.counts.bigwig", "name": "ENCSR212VEN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR212VEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR212VEN/full_ENCSR212VEN.profile.bigwig", "name": "ENCSR212VEN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR212VEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR539WBA/preprocessing/bigWigs/ENCSR539WBA.bigWig", "name": "ENCSR539WBA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR539WBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (37 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR539WBA/ENCSR539WBA_w_bias.bw", "name": "ENCSR539WBA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR539WBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (37 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR539WBA/ENCSR539WBA_wo_bias.bw", "name": "ENCSR539WBA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR539WBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (37 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR539WBA/full_ENCSR539WBA.counts.bigwig", "name": "ENCSR539WBA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR539WBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (37 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR539WBA/full_ENCSR539WBA.profile.bigwig", "name": "ENCSR539WBA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR539WBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (37 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR277KRY/preprocessing/bigWigs/ENCSR277KRY.bigWig", "name": "ENCSR277KRY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR277KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR277KRY/ENCSR277KRY_w_bias.bw", "name": "ENCSR277KRY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR277KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR277KRY/ENCSR277KRY_wo_bias.bw", "name": "ENCSR277KRY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR277KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR277KRY/full_ENCSR277KRY.counts.bigwig", "name": "ENCSR277KRY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR277KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR277KRY/full_ENCSR277KRY.profile.bigwig", "name": "ENCSR277KRY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR277KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male adult (37 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR922YEW/preprocessing/bigWigs/ENCSR922YEW.bigWig", "name": "ENCSR922YEW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR922YEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR922YEW/ENCSR922YEW_w_bias.bw", "name": "ENCSR922YEW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR922YEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR922YEW/ENCSR922YEW_wo_bias.bw", "name": "ENCSR922YEW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR922YEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR922YEW/full_ENCSR922YEW.counts.bigwig", "name": "ENCSR922YEW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR922YEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR922YEW/full_ENCSR922YEW.profile.bigwig", "name": "ENCSR922YEW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR922YEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR541JMK/preprocessing/bigWigs/ENCSR541JMK.bigWig", "name": "ENCSR541JMK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR541JMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (47 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541JMK/ENCSR541JMK_w_bias.bw", "name": "ENCSR541JMK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541JMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (47 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541JMK/ENCSR541JMK_wo_bias.bw", "name": "ENCSR541JMK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541JMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (47 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541JMK/full_ENCSR541JMK.counts.bigwig", "name": "ENCSR541JMK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541JMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (47 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541JMK/full_ENCSR541JMK.profile.bigwig", "name": "ENCSR541JMK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541JMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (47 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR195ONB/preprocessing/bigWigs/ENCSR195ONB.bigWig", "name": "ENCSR195ONB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR195ONB" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195ONB/ENCSR195ONB_w_bias.bw", "name": "ENCSR195ONB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR195ONB" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195ONB/ENCSR195ONB_wo_bias.bw", "name": "ENCSR195ONB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR195ONB" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195ONB/full_ENCSR195ONB.counts.bigwig", "name": "ENCSR195ONB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR195ONB" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195ONB/full_ENCSR195ONB.profile.bigwig", "name": "ENCSR195ONB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR195ONB" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (53 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR885WWJ/preprocessing/bigWigs/ENCSR885WWJ.bigWig", "name": "ENCSR885WWJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR885WWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885WWJ/ENCSR885WWJ_w_bias.bw", "name": "ENCSR885WWJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR885WWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885WWJ/ENCSR885WWJ_wo_bias.bw", "name": "ENCSR885WWJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR885WWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885WWJ/full_ENCSR885WWJ.counts.bigwig", "name": "ENCSR885WWJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR885WWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885WWJ/full_ENCSR885WWJ.profile.bigwig", "name": "ENCSR885WWJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR885WWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR042DVU/preprocessing/bigWigs/ENCSR042DVU.bigWig", "name": "ENCSR042DVU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR042DVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (74 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042DVU/ENCSR042DVU_w_bias.bw", "name": "ENCSR042DVU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR042DVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (74 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042DVU/ENCSR042DVU_wo_bias.bw", "name": "ENCSR042DVU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR042DVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (74 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042DVU/full_ENCSR042DVU.counts.bigwig", "name": "ENCSR042DVU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR042DVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (74 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042DVU/full_ENCSR042DVU.profile.bigwig", "name": "ENCSR042DVU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR042DVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (74 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR432QFU/preprocessing/bigWigs/ENCSR432QFU.bigWig", "name": "ENCSR432QFU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR432QFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (73 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR432QFU/ENCSR432QFU_w_bias.bw", "name": "ENCSR432QFU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR432QFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (73 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR432QFU/ENCSR432QFU_wo_bias.bw", "name": "ENCSR432QFU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR432QFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (73 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR432QFU/full_ENCSR432QFU.counts.bigwig", "name": "ENCSR432QFU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR432QFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (73 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR432QFU/full_ENCSR432QFU.profile.bigwig", "name": "ENCSR432QFU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR432QFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (73 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR639VTO/preprocessing/bigWigs/ENCSR639VTO.bigWig", "name": "ENCSR639VTO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR639VTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR639VTO/ENCSR639VTO_w_bias.bw", "name": "ENCSR639VTO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR639VTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR639VTO/ENCSR639VTO_wo_bias.bw", "name": "ENCSR639VTO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR639VTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR639VTO/full_ENCSR639VTO.counts.bigwig", "name": "ENCSR639VTO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR639VTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR639VTO/full_ENCSR639VTO.profile.bigwig", "name": "ENCSR639VTO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR639VTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR930PDT/preprocessing/bigWigs/ENCSR930PDT.bigWig", "name": "ENCSR930PDT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR930PDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930PDT/ENCSR930PDT_w_bias.bw", "name": "ENCSR930PDT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR930PDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930PDT/ENCSR930PDT_wo_bias.bw", "name": "ENCSR930PDT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR930PDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930PDT/full_ENCSR930PDT.counts.bigwig", "name": "ENCSR930PDT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR930PDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930PDT/full_ENCSR930PDT.profile.bigwig", "name": "ENCSR930PDT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR930PDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (53 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR789FJF/preprocessing/bigWigs/ENCSR789FJF.bigWig", "name": "ENCSR789FJF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR789FJF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789FJF/ENCSR789FJF_w_bias.bw", "name": "ENCSR789FJF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR789FJF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789FJF/ENCSR789FJF_wo_bias.bw", "name": "ENCSR789FJF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR789FJF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789FJF/full_ENCSR789FJF.counts.bigwig", "name": "ENCSR789FJF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR789FJF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789FJF/full_ENCSR789FJF.profile.bigwig", "name": "ENCSR789FJF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR789FJF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR006MAW/preprocessing/bigWigs/ENCSR006MAW.bigWig", "name": "ENCSR006MAW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR006MAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006MAW/ENCSR006MAW_w_bias.bw", "name": "ENCSR006MAW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR006MAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006MAW/ENCSR006MAW_wo_bias.bw", "name": "ENCSR006MAW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR006MAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006MAW/full_ENCSR006MAW.counts.bigwig", "name": "ENCSR006MAW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR006MAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006MAW/full_ENCSR006MAW.profile.bigwig", "name": "ENCSR006MAW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR006MAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR340MRJ/preprocessing/bigWigs/ENCSR340MRJ.bigWig", "name": "ENCSR340MRJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR340MRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340MRJ/ENCSR340MRJ_w_bias.bw", "name": "ENCSR340MRJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR340MRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340MRJ/ENCSR340MRJ_wo_bias.bw", "name": "ENCSR340MRJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR340MRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340MRJ/full_ENCSR340MRJ.counts.bigwig", "name": "ENCSR340MRJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR340MRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340MRJ/full_ENCSR340MRJ.profile.bigwig", "name": "ENCSR340MRJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR340MRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (54 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR276MDV/preprocessing/bigWigs/ENCSR276MDV.bigWig", "name": "ENCSR276MDV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR276MDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276MDV/ENCSR276MDV_w_bias.bw", "name": "ENCSR276MDV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR276MDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276MDV/ENCSR276MDV_wo_bias.bw", "name": "ENCSR276MDV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR276MDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276MDV/full_ENCSR276MDV.counts.bigwig", "name": "ENCSR276MDV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR276MDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276MDV/full_ENCSR276MDV.profile.bigwig", "name": "ENCSR276MDV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR276MDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR670BGI/preprocessing/bigWigs/ENCSR670BGI.bigWig", "name": "ENCSR670BGI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR670BGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670BGI/ENCSR670BGI_w_bias.bw", "name": "ENCSR670BGI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR670BGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670BGI/ENCSR670BGI_wo_bias.bw", "name": "ENCSR670BGI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR670BGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670BGI/full_ENCSR670BGI.counts.bigwig", "name": "ENCSR670BGI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR670BGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670BGI/full_ENCSR670BGI.profile.bigwig", "name": "ENCSR670BGI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR670BGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR464TKV/preprocessing/bigWigs/ENCSR464TKV.bigWig", "name": "ENCSR464TKV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR464TKV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR464TKV/ENCSR464TKV_w_bias.bw", "name": "ENCSR464TKV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR464TKV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR464TKV/ENCSR464TKV_wo_bias.bw", "name": "ENCSR464TKV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR464TKV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR464TKV/full_ENCSR464TKV.counts.bigwig", "name": "ENCSR464TKV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR464TKV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR464TKV/full_ENCSR464TKV.profile.bigwig", "name": "ENCSR464TKV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR464TKV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue male adult (54 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR173NHL/preprocessing/bigWigs/ENCSR173NHL.bigWig", "name": "ENCSR173NHL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR173NHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173NHL/ENCSR173NHL_w_bias.bw", "name": "ENCSR173NHL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR173NHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173NHL/ENCSR173NHL_wo_bias.bw", "name": "ENCSR173NHL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR173NHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173NHL/full_ENCSR173NHL.counts.bigwig", "name": "ENCSR173NHL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR173NHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173NHL/full_ENCSR173NHL.profile.bigwig", "name": "ENCSR173NHL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR173NHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR721DFB/preprocessing/bigWigs/ENCSR721DFB.bigWig", "name": "ENCSR721DFB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR721DFB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR721DFB/ENCSR721DFB_w_bias.bw", "name": "ENCSR721DFB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR721DFB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR721DFB/ENCSR721DFB_wo_bias.bw", "name": "ENCSR721DFB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR721DFB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR721DFB/full_ENCSR721DFB.counts.bigwig", "name": "ENCSR721DFB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR721DFB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR721DFB/full_ENCSR721DFB.profile.bigwig", "name": "ENCSR721DFB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR721DFB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR742HBK/preprocessing/bigWigs/ENCSR742HBK.bigWig", "name": "ENCSR742HBK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR742HBK" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR742HBK/ENCSR742HBK_w_bias.bw", "name": "ENCSR742HBK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR742HBK" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR742HBK/ENCSR742HBK_wo_bias.bw", "name": "ENCSR742HBK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR742HBK" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR742HBK/full_ENCSR742HBK.counts.bigwig", "name": "ENCSR742HBK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR742HBK" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR742HBK/full_ENCSR742HBK.profile.bigwig", "name": "ENCSR742HBK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR742HBK" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR298OIK/preprocessing/bigWigs/ENCSR298OIK.bigWig", "name": "ENCSR298OIK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR298OIK" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298OIK/ENCSR298OIK_w_bias.bw", "name": "ENCSR298OIK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR298OIK" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298OIK/ENCSR298OIK_wo_bias.bw", "name": "ENCSR298OIK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR298OIK" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298OIK/full_ENCSR298OIK.counts.bigwig", "name": "ENCSR298OIK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR298OIK" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298OIK/full_ENCSR298OIK.profile.bigwig", "name": "ENCSR298OIK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR298OIK" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (43 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR587SZC/preprocessing/bigWigs/ENCSR587SZC.bigWig", "name": "ENCSR587SZC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR587SZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR587SZC/ENCSR587SZC_w_bias.bw", "name": "ENCSR587SZC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR587SZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR587SZC/ENCSR587SZC_wo_bias.bw", "name": "ENCSR587SZC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR587SZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR587SZC/full_ENCSR587SZC.counts.bigwig", "name": "ENCSR587SZC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR587SZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR587SZC/full_ENCSR587SZC.profile.bigwig", "name": "ENCSR587SZC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR587SZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR945JJB/preprocessing/bigWigs/ENCSR945JJB.bigWig", "name": "ENCSR945JJB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR945JJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945JJB/ENCSR945JJB_w_bias.bw", "name": "ENCSR945JJB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR945JJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945JJB/ENCSR945JJB_wo_bias.bw", "name": "ENCSR945JJB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR945JJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945JJB/full_ENCSR945JJB.counts.bigwig", "name": "ENCSR945JJB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR945JJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945JJB/full_ENCSR945JJB.profile.bigwig", "name": "ENCSR945JJB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR945JJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female adult (47 years)", "biosample term name": "lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR994KTY/preprocessing/bigWigs/ENCSR994KTY.bigWig", "name": "ENCSR994KTY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR994KTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female adult (41 years)", "biosample term name": "colonic mucosa", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR994KTY/ENCSR994KTY_w_bias.bw", "name": "ENCSR994KTY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR994KTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female adult (41 years)", "biosample term name": "colonic mucosa", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR994KTY/ENCSR994KTY_wo_bias.bw", "name": "ENCSR994KTY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR994KTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female adult (41 years)", "biosample term name": "colonic mucosa", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR994KTY/full_ENCSR994KTY.counts.bigwig", "name": "ENCSR994KTY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR994KTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female adult (41 years)", "biosample term name": "colonic mucosa", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR994KTY/full_ENCSR994KTY.profile.bigwig", "name": "ENCSR994KTY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR994KTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female adult (41 years)", "biosample term name": "colonic mucosa", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR329FAP/preprocessing/bigWigs/ENCSR329FAP.bigWig", "name": "ENCSR329FAP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR329FAP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR329FAP/ENCSR329FAP_w_bias.bw", "name": "ENCSR329FAP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR329FAP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR329FAP/ENCSR329FAP_wo_bias.bw", "name": "ENCSR329FAP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR329FAP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR329FAP/full_ENCSR329FAP.counts.bigwig", "name": "ENCSR329FAP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR329FAP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR329FAP/full_ENCSR329FAP.profile.bigwig", "name": "ENCSR329FAP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR329FAP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR881FBS/preprocessing/bigWigs/ENCSR881FBS.bigWig", "name": "ENCSR881FBS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR881FBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881FBS/ENCSR881FBS_w_bias.bw", "name": "ENCSR881FBS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR881FBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881FBS/ENCSR881FBS_wo_bias.bw", "name": "ENCSR881FBS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR881FBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881FBS/full_ENCSR881FBS.counts.bigwig", "name": "ENCSR881FBS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR881FBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881FBS/full_ENCSR881FBS.profile.bigwig", "name": "ENCSR881FBS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR881FBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR236KPK/preprocessing/bigWigs/ENCSR236KPK.bigWig", "name": "ENCSR236KPK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR236KPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR236KPK/ENCSR236KPK_w_bias.bw", "name": "ENCSR236KPK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR236KPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR236KPK/ENCSR236KPK_wo_bias.bw", "name": "ENCSR236KPK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR236KPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR236KPK/full_ENCSR236KPK.counts.bigwig", "name": "ENCSR236KPK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR236KPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR236KPK/full_ENCSR236KPK.profile.bigwig", "name": "ENCSR236KPK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR236KPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (47 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR524QBS/preprocessing/bigWigs/ENCSR524QBS.bigWig", "name": "ENCSR524QBS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR524QBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QBS/ENCSR524QBS_w_bias.bw", "name": "ENCSR524QBS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR524QBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QBS/ENCSR524QBS_wo_bias.bw", "name": "ENCSR524QBS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR524QBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QBS/full_ENCSR524QBS.counts.bigwig", "name": "ENCSR524QBS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR524QBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QBS/full_ENCSR524QBS.profile.bigwig", "name": "ENCSR524QBS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR524QBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens cardiac septum tissue female adult (41 years)", "biosample term name": "cardiac septum", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR388DHS/preprocessing/bigWigs/ENCSR388DHS.bigWig", "name": "ENCSR388DHS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR388DHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388DHS/ENCSR388DHS_w_bias.bw", "name": "ENCSR388DHS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR388DHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388DHS/ENCSR388DHS_wo_bias.bw", "name": "ENCSR388DHS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR388DHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388DHS/full_ENCSR388DHS.counts.bigwig", "name": "ENCSR388DHS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR388DHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388DHS/full_ENCSR388DHS.profile.bigwig", "name": "ENCSR388DHS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR388DHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (59 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR011SAG/preprocessing/bigWigs/ENCSR011SAG.bigWig", "name": "ENCSR011SAG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR011SAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR011SAG/ENCSR011SAG_w_bias.bw", "name": "ENCSR011SAG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR011SAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR011SAG/ENCSR011SAG_wo_bias.bw", "name": "ENCSR011SAG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR011SAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR011SAG/full_ENCSR011SAG.counts.bigwig", "name": "ENCSR011SAG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR011SAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR011SAG/full_ENCSR011SAG.profile.bigwig", "name": "ENCSR011SAG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR011SAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of gallbladder tissue female child (16 years)", "biosample term name": "mucosa of gallbladder", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR756FQD/preprocessing/bigWigs/ENCSR756FQD.bigWig", "name": "ENCSR756FQD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR756FQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR756FQD/ENCSR756FQD_w_bias.bw", "name": "ENCSR756FQD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR756FQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR756FQD/ENCSR756FQD_wo_bias.bw", "name": "ENCSR756FQD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR756FQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR756FQD/full_ENCSR756FQD.counts.bigwig", "name": "ENCSR756FQD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR756FQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR756FQD/full_ENCSR756FQD.profile.bigwig", "name": "ENCSR756FQD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR756FQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR137FWW/preprocessing/bigWigs/ENCSR137FWW.bigWig", "name": "ENCSR137FWW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR137FWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR137FWW/ENCSR137FWW_w_bias.bw", "name": "ENCSR137FWW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR137FWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR137FWW/ENCSR137FWW_wo_bias.bw", "name": "ENCSR137FWW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR137FWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR137FWW/full_ENCSR137FWW.counts.bigwig", "name": "ENCSR137FWW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR137FWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR137FWW/full_ENCSR137FWW.profile.bigwig", "name": "ENCSR137FWW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR137FWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR400MOP/preprocessing/bigWigs/ENCSR400MOP.bigWig", "name": "ENCSR400MOP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR400MOP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR400MOP/ENCSR400MOP_w_bias.bw", "name": "ENCSR400MOP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR400MOP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR400MOP/ENCSR400MOP_wo_bias.bw", "name": "ENCSR400MOP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR400MOP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR400MOP/full_ENCSR400MOP.counts.bigwig", "name": "ENCSR400MOP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR400MOP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR400MOP/full_ENCSR400MOP.profile.bigwig", "name": "ENCSR400MOP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR400MOP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR024BXN/preprocessing/bigWigs/ENCSR024BXN.bigWig", "name": "ENCSR024BXN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR024BXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR024BXN/ENCSR024BXN_w_bias.bw", "name": "ENCSR024BXN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR024BXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR024BXN/ENCSR024BXN_wo_bias.bw", "name": "ENCSR024BXN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR024BXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR024BXN/full_ENCSR024BXN.counts.bigwig", "name": "ENCSR024BXN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR024BXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR024BXN/full_ENCSR024BXN.profile.bigwig", "name": "ENCSR024BXN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR024BXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR261RWJ/preprocessing/bigWigs/ENCSR261RWJ.bigWig", "name": "ENCSR261RWJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR261RWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (51 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261RWJ/ENCSR261RWJ_w_bias.bw", "name": "ENCSR261RWJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR261RWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (51 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261RWJ/ENCSR261RWJ_wo_bias.bw", "name": "ENCSR261RWJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR261RWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (51 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261RWJ/full_ENCSR261RWJ.counts.bigwig", "name": "ENCSR261RWJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR261RWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (51 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261RWJ/full_ENCSR261RWJ.profile.bigwig", "name": "ENCSR261RWJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR261RWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (51 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR872DUY/preprocessing/bigWigs/ENCSR872DUY.bigWig", "name": "ENCSR872DUY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR872DUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR872DUY/ENCSR872DUY_w_bias.bw", "name": "ENCSR872DUY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR872DUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR872DUY/ENCSR872DUY_wo_bias.bw", "name": "ENCSR872DUY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR872DUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR872DUY/full_ENCSR872DUY.counts.bigwig", "name": "ENCSR872DUY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR872DUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR872DUY/full_ENCSR872DUY.profile.bigwig", "name": "ENCSR872DUY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR872DUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (41 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR805EGZ/preprocessing/bigWigs/ENCSR805EGZ.bigWig", "name": "ENCSR805EGZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR805EGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805EGZ/ENCSR805EGZ_w_bias.bw", "name": "ENCSR805EGZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR805EGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805EGZ/ENCSR805EGZ_wo_bias.bw", "name": "ENCSR805EGZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR805EGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805EGZ/full_ENCSR805EGZ.counts.bigwig", "name": "ENCSR805EGZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR805EGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805EGZ/full_ENCSR805EGZ.profile.bigwig", "name": "ENCSR805EGZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR805EGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (56 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR545ADK/preprocessing/bigWigs/ENCSR545ADK.bigWig", "name": "ENCSR545ADK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR545ADK" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545ADK/ENCSR545ADK_w_bias.bw", "name": "ENCSR545ADK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR545ADK" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545ADK/ENCSR545ADK_wo_bias.bw", "name": "ENCSR545ADK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR545ADK" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545ADK/full_ENCSR545ADK.counts.bigwig", "name": "ENCSR545ADK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR545ADK" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545ADK/full_ENCSR545ADK.profile.bigwig", "name": "ENCSR545ADK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR545ADK" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (59 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR334MDJ/preprocessing/bigWigs/ENCSR334MDJ.bigWig", "name": "ENCSR334MDJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR334MDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR334MDJ/ENCSR334MDJ_w_bias.bw", "name": "ENCSR334MDJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR334MDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR334MDJ/ENCSR334MDJ_wo_bias.bw", "name": "ENCSR334MDJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR334MDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR334MDJ/full_ENCSR334MDJ.counts.bigwig", "name": "ENCSR334MDJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR334MDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR334MDJ/full_ENCSR334MDJ.profile.bigwig", "name": "ENCSR334MDJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR334MDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR001QTZ/preprocessing/bigWigs/ENCSR001QTZ.bigWig", "name": "ENCSR001QTZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR001QTZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR001QTZ/ENCSR001QTZ_w_bias.bw", "name": "ENCSR001QTZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR001QTZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR001QTZ/ENCSR001QTZ_wo_bias.bw", "name": "ENCSR001QTZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR001QTZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR001QTZ/full_ENCSR001QTZ.counts.bigwig", "name": "ENCSR001QTZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR001QTZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR001QTZ/full_ENCSR001QTZ.profile.bigwig", "name": "ENCSR001QTZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR001QTZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR822GDF/preprocessing/bigWigs/ENCSR822GDF.bigWig", "name": "ENCSR822GDF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR822GDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR822GDF/ENCSR822GDF_w_bias.bw", "name": "ENCSR822GDF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR822GDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR822GDF/ENCSR822GDF_wo_bias.bw", "name": "ENCSR822GDF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR822GDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR822GDF/full_ENCSR822GDF.counts.bigwig", "name": "ENCSR822GDF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR822GDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR822GDF/full_ENCSR822GDF.profile.bigwig", "name": "ENCSR822GDF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR822GDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR571CJM/preprocessing/bigWigs/ENCSR571CJM.bigWig", "name": "ENCSR571CJM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR571CJM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR571CJM/ENCSR571CJM_w_bias.bw", "name": "ENCSR571CJM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR571CJM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR571CJM/ENCSR571CJM_wo_bias.bw", "name": "ENCSR571CJM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR571CJM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR571CJM/full_ENCSR571CJM.counts.bigwig", "name": "ENCSR571CJM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR571CJM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR571CJM/full_ENCSR571CJM.profile.bigwig", "name": "ENCSR571CJM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR571CJM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR873ANE/preprocessing/bigWigs/ENCSR873ANE.bigWig", "name": "ENCSR873ANE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR873ANE" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (76 days) and male embryo (76 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR873ANE/ENCSR873ANE_w_bias.bw", "name": "ENCSR873ANE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR873ANE" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (76 days) and male embryo (76 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR873ANE/ENCSR873ANE_wo_bias.bw", "name": "ENCSR873ANE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR873ANE" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (76 days) and male embryo (76 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR873ANE/full_ENCSR873ANE.counts.bigwig", "name": "ENCSR873ANE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR873ANE" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (76 days) and male embryo (76 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR873ANE/full_ENCSR873ANE.profile.bigwig", "name": "ENCSR873ANE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR873ANE" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (76 days) and male embryo (76 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR671YPX/preprocessing/bigWigs/ENCSR671YPX.bigWig", "name": "ENCSR671YPX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR671YPX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (77 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR671YPX/ENCSR671YPX_w_bias.bw", "name": "ENCSR671YPX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR671YPX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (77 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR671YPX/ENCSR671YPX_wo_bias.bw", "name": "ENCSR671YPX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR671YPX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (77 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR671YPX/full_ENCSR671YPX.counts.bigwig", "name": "ENCSR671YPX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR671YPX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (77 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR671YPX/full_ENCSR671YPX.profile.bigwig", "name": "ENCSR671YPX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR671YPX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (77 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR006XFA/preprocessing/bigWigs/ENCSR006XFA.bigWig", "name": "ENCSR006XFA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR006XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006XFA/ENCSR006XFA_w_bias.bw", "name": "ENCSR006XFA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR006XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006XFA/ENCSR006XFA_wo_bias.bw", "name": "ENCSR006XFA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR006XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006XFA/full_ENCSR006XFA.counts.bigwig", "name": "ENCSR006XFA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR006XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006XFA/full_ENCSR006XFA.profile.bigwig", "name": "ENCSR006XFA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR006XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR365NDK/preprocessing/bigWigs/ENCSR365NDK.bigWig", "name": "ENCSR365NDK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR365NDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (51 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365NDK/ENCSR365NDK_w_bias.bw", "name": "ENCSR365NDK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR365NDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (51 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365NDK/ENCSR365NDK_wo_bias.bw", "name": "ENCSR365NDK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR365NDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (51 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365NDK/full_ENCSR365NDK.counts.bigwig", "name": "ENCSR365NDK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR365NDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (51 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365NDK/full_ENCSR365NDK.profile.bigwig", "name": "ENCSR365NDK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR365NDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (51 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR410MFU/preprocessing/bigWigs/ENCSR410MFU.bigWig", "name": "ENCSR410MFU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR410MFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410MFU/ENCSR410MFU_w_bias.bw", "name": "ENCSR410MFU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR410MFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410MFU/ENCSR410MFU_wo_bias.bw", "name": "ENCSR410MFU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR410MFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410MFU/full_ENCSR410MFU.counts.bigwig", "name": "ENCSR410MFU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR410MFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410MFU/full_ENCSR410MFU.profile.bigwig", "name": "ENCSR410MFU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR410MFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (88 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR351FWN/preprocessing/bigWigs/ENCSR351FWN.bigWig", "name": "ENCSR351FWN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR351FWN" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR351FWN/ENCSR351FWN_w_bias.bw", "name": "ENCSR351FWN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR351FWN" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR351FWN/ENCSR351FWN_wo_bias.bw", "name": "ENCSR351FWN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR351FWN" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR351FWN/full_ENCSR351FWN.counts.bigwig", "name": "ENCSR351FWN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR351FWN" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR351FWN/full_ENCSR351FWN.profile.bigwig", "name": "ENCSR351FWN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR351FWN" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR297WRG/preprocessing/bigWigs/ENCSR297WRG.bigWig", "name": "ENCSR297WRG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR297WRG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR297WRG/ENCSR297WRG_w_bias.bw", "name": "ENCSR297WRG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR297WRG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR297WRG/ENCSR297WRG_wo_bias.bw", "name": "ENCSR297WRG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR297WRG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR297WRG/full_ENCSR297WRG.counts.bigwig", "name": "ENCSR297WRG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR297WRG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR297WRG/full_ENCSR297WRG.profile.bigwig", "name": "ENCSR297WRG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR297WRG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR059NIN/preprocessing/bigWigs/ENCSR059NIN.bigWig", "name": "ENCSR059NIN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR059NIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue male adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059NIN/ENCSR059NIN_w_bias.bw", "name": "ENCSR059NIN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR059NIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue male adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059NIN/ENCSR059NIN_wo_bias.bw", "name": "ENCSR059NIN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR059NIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue male adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059NIN/full_ENCSR059NIN.counts.bigwig", "name": "ENCSR059NIN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR059NIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue male adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059NIN/full_ENCSR059NIN.profile.bigwig", "name": "ENCSR059NIN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR059NIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue male adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR770OTB/preprocessing/bigWigs/ENCSR770OTB.bigWig", "name": "ENCSR770OTB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR770OTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770OTB/ENCSR770OTB_w_bias.bw", "name": "ENCSR770OTB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR770OTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770OTB/ENCSR770OTB_wo_bias.bw", "name": "ENCSR770OTB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR770OTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770OTB/full_ENCSR770OTB.counts.bigwig", "name": "ENCSR770OTB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR770OTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770OTB/full_ENCSR770OTB.profile.bigwig", "name": "ENCSR770OTB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR770OTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR931UQB/preprocessing/bigWigs/ENCSR931UQB.bigWig", "name": "ENCSR931UQB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR931UQB" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male adult (34 years)", "biosample term name": "small intestine", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR931UQB/ENCSR931UQB_w_bias.bw", "name": "ENCSR931UQB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR931UQB" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male adult (34 years)", "biosample term name": "small intestine", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR931UQB/ENCSR931UQB_wo_bias.bw", "name": "ENCSR931UQB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR931UQB" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male adult (34 years)", "biosample term name": "small intestine", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR931UQB/full_ENCSR931UQB.counts.bigwig", "name": "ENCSR931UQB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR931UQB" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male adult (34 years)", "biosample term name": "small intestine", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR931UQB/full_ENCSR931UQB.profile.bigwig", "name": "ENCSR931UQB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR931UQB" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male adult (34 years)", "biosample term name": "small intestine", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR417LPB/preprocessing/bigWigs/ENCSR417LPB.bigWig", "name": "ENCSR417LPB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR417LPB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR417LPB/ENCSR417LPB_w_bias.bw", "name": "ENCSR417LPB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR417LPB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR417LPB/ENCSR417LPB_wo_bias.bw", "name": "ENCSR417LPB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR417LPB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR417LPB/full_ENCSR417LPB.counts.bigwig", "name": "ENCSR417LPB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR417LPB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR417LPB/full_ENCSR417LPB.profile.bigwig", "name": "ENCSR417LPB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR417LPB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR916MHX/preprocessing/bigWigs/ENCSR916MHX.bigWig", "name": "ENCSR916MHX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR916MHX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR916MHX/ENCSR916MHX_w_bias.bw", "name": "ENCSR916MHX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR916MHX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR916MHX/ENCSR916MHX_wo_bias.bw", "name": "ENCSR916MHX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR916MHX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR916MHX/full_ENCSR916MHX.counts.bigwig", "name": "ENCSR916MHX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR916MHX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR916MHX/full_ENCSR916MHX.profile.bigwig", "name": "ENCSR916MHX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR916MHX" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR239MQN/preprocessing/bigWigs/ENCSR239MQN.bigWig", "name": "ENCSR239MQN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR239MQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239MQN/ENCSR239MQN_w_bias.bw", "name": "ENCSR239MQN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR239MQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239MQN/ENCSR239MQN_wo_bias.bw", "name": "ENCSR239MQN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR239MQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239MQN/full_ENCSR239MQN.counts.bigwig", "name": "ENCSR239MQN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR239MQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239MQN/full_ENCSR239MQN.profile.bigwig", "name": "ENCSR239MQN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR239MQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR579RVI/preprocessing/bigWigs/ENCSR579RVI.bigWig", "name": "ENCSR579RVI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR579RVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579RVI/ENCSR579RVI_w_bias.bw", "name": "ENCSR579RVI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR579RVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579RVI/ENCSR579RVI_wo_bias.bw", "name": "ENCSR579RVI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR579RVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579RVI/full_ENCSR579RVI.counts.bigwig", "name": "ENCSR579RVI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR579RVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579RVI/full_ENCSR579RVI.profile.bigwig", "name": "ENCSR579RVI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR579RVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR510ITB/preprocessing/bigWigs/ENCSR510ITB.bigWig", "name": "ENCSR510ITB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR510ITB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (91 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510ITB/ENCSR510ITB_w_bias.bw", "name": "ENCSR510ITB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR510ITB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (91 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510ITB/ENCSR510ITB_wo_bias.bw", "name": "ENCSR510ITB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR510ITB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (91 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510ITB/full_ENCSR510ITB.counts.bigwig", "name": "ENCSR510ITB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR510ITB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (91 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510ITB/full_ENCSR510ITB.profile.bigwig", "name": "ENCSR510ITB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR510ITB" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (91 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR138UGH/preprocessing/bigWigs/ENCSR138UGH.bigWig", "name": "ENCSR138UGH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR138UGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR138UGH/ENCSR138UGH_w_bias.bw", "name": "ENCSR138UGH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR138UGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR138UGH/ENCSR138UGH_wo_bias.bw", "name": "ENCSR138UGH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR138UGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR138UGH/full_ENCSR138UGH.counts.bigwig", "name": "ENCSR138UGH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR138UGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR138UGH/full_ENCSR138UGH.profile.bigwig", "name": "ENCSR138UGH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR138UGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (61 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR210ESN/preprocessing/bigWigs/ENCSR210ESN.bigWig", "name": "ENCSR210ESN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR210ESN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (74 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210ESN/ENCSR210ESN_w_bias.bw", "name": "ENCSR210ESN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR210ESN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (74 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210ESN/ENCSR210ESN_wo_bias.bw", "name": "ENCSR210ESN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR210ESN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (74 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210ESN/full_ENCSR210ESN.counts.bigwig", "name": "ENCSR210ESN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR210ESN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (74 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210ESN/full_ENCSR210ESN.profile.bigwig", "name": "ENCSR210ESN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR210ESN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (74 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR954AJK/preprocessing/bigWigs/ENCSR954AJK.bigWig", "name": "ENCSR954AJK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR954AJK" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (37 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR954AJK/ENCSR954AJK_w_bias.bw", "name": "ENCSR954AJK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR954AJK" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (37 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR954AJK/ENCSR954AJK_wo_bias.bw", "name": "ENCSR954AJK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR954AJK" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (37 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR954AJK/full_ENCSR954AJK.counts.bigwig", "name": "ENCSR954AJK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR954AJK" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (37 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR954AJK/full_ENCSR954AJK.profile.bigwig", "name": "ENCSR954AJK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR954AJK" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (37 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR498RLX/preprocessing/bigWigs/ENCSR498RLX.bigWig", "name": "ENCSR498RLX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR498RLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498RLX/ENCSR498RLX_w_bias.bw", "name": "ENCSR498RLX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR498RLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498RLX/ENCSR498RLX_wo_bias.bw", "name": "ENCSR498RLX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR498RLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498RLX/full_ENCSR498RLX.counts.bigwig", "name": "ENCSR498RLX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR498RLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498RLX/full_ENCSR498RLX.profile.bigwig", "name": "ENCSR498RLX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR498RLX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR484UAU/preprocessing/bigWigs/ENCSR484UAU.bigWig", "name": "ENCSR484UAU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR484UAU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (37 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR484UAU/ENCSR484UAU_w_bias.bw", "name": "ENCSR484UAU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR484UAU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (37 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR484UAU/ENCSR484UAU_wo_bias.bw", "name": "ENCSR484UAU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR484UAU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (37 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR484UAU/full_ENCSR484UAU.counts.bigwig", "name": "ENCSR484UAU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR484UAU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (37 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR484UAU/full_ENCSR484UAU.profile.bigwig", "name": "ENCSR484UAU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR484UAU" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (37 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR059ETS/preprocessing/bigWigs/ENCSR059ETS.bigWig", "name": "ENCSR059ETS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR059ETS" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059ETS/ENCSR059ETS_w_bias.bw", "name": "ENCSR059ETS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR059ETS" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059ETS/ENCSR059ETS_wo_bias.bw", "name": "ENCSR059ETS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR059ETS" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059ETS/full_ENCSR059ETS.counts.bigwig", "name": "ENCSR059ETS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR059ETS" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR059ETS/full_ENCSR059ETS.profile.bigwig", "name": "ENCSR059ETS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR059ETS" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR584LUZ/preprocessing/bigWigs/ENCSR584LUZ.bigWig", "name": "ENCSR584LUZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR584LUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Ammon's horn tissue male adult (84 years)", "biosample term name": "Ammon's horn", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR584LUZ/ENCSR584LUZ_w_bias.bw", "name": "ENCSR584LUZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR584LUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Ammon's horn tissue male adult (84 years)", "biosample term name": "Ammon's horn", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR584LUZ/ENCSR584LUZ_wo_bias.bw", "name": "ENCSR584LUZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR584LUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Ammon's horn tissue male adult (84 years)", "biosample term name": "Ammon's horn", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR584LUZ/full_ENCSR584LUZ.counts.bigwig", "name": "ENCSR584LUZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR584LUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Ammon's horn tissue male adult (84 years)", "biosample term name": "Ammon's horn", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR584LUZ/full_ENCSR584LUZ.profile.bigwig", "name": "ENCSR584LUZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR584LUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens Ammon's horn tissue male adult (84 years)", "biosample term name": "Ammon's horn", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR097BWW/preprocessing/bigWigs/ENCSR097BWW.bigWig", "name": "ENCSR097BWW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR097BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (59 days) and male embryo (91 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097BWW/ENCSR097BWW_w_bias.bw", "name": "ENCSR097BWW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR097BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (59 days) and male embryo (91 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097BWW/ENCSR097BWW_wo_bias.bw", "name": "ENCSR097BWW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR097BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (59 days) and male embryo (91 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097BWW/full_ENCSR097BWW.counts.bigwig", "name": "ENCSR097BWW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR097BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (59 days) and male embryo (91 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097BWW/full_ENCSR097BWW.profile.bigwig", "name": "ENCSR097BWW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR097BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (59 days) and male embryo (91 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR268GBM/preprocessing/bigWigs/ENCSR268GBM.bigWig", "name": "ENCSR268GBM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR268GBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR268GBM/ENCSR268GBM_w_bias.bw", "name": "ENCSR268GBM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR268GBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR268GBM/ENCSR268GBM_wo_bias.bw", "name": "ENCSR268GBM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR268GBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR268GBM/full_ENCSR268GBM.counts.bigwig", "name": "ENCSR268GBM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR268GBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR268GBM/full_ENCSR268GBM.profile.bigwig", "name": "ENCSR268GBM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR268GBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR622HTS/preprocessing/bigWigs/ENCSR622HTS.bigWig", "name": "ENCSR622HTS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR622HTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (59 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622HTS/ENCSR622HTS_w_bias.bw", "name": "ENCSR622HTS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR622HTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (59 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622HTS/ENCSR622HTS_wo_bias.bw", "name": "ENCSR622HTS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR622HTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (59 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622HTS/full_ENCSR622HTS.counts.bigwig", "name": "ENCSR622HTS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR622HTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (59 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622HTS/full_ENCSR622HTS.profile.bigwig", "name": "ENCSR622HTS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR622HTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (59 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR595DQM/preprocessing/bigWigs/ENCSR595DQM.bigWig", "name": "ENCSR595DQM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR595DQM" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (59 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595DQM/ENCSR595DQM_w_bias.bw", "name": "ENCSR595DQM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR595DQM" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (59 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595DQM/ENCSR595DQM_wo_bias.bw", "name": "ENCSR595DQM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR595DQM" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (59 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595DQM/full_ENCSR595DQM.counts.bigwig", "name": "ENCSR595DQM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR595DQM" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (59 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595DQM/full_ENCSR595DQM.profile.bigwig", "name": "ENCSR595DQM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR595DQM" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (59 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR401UZL/preprocessing/bigWigs/ENCSR401UZL.bigWig", "name": "ENCSR401UZL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR401UZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR401UZL/ENCSR401UZL_w_bias.bw", "name": "ENCSR401UZL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR401UZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR401UZL/ENCSR401UZL_wo_bias.bw", "name": "ENCSR401UZL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR401UZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR401UZL/full_ENCSR401UZL.counts.bigwig", "name": "ENCSR401UZL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR401UZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR401UZL/full_ENCSR401UZL.profile.bigwig", "name": "ENCSR401UZL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR401UZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR661AMM/preprocessing/bigWigs/ENCSR661AMM.bigWig", "name": "ENCSR661AMM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR661AMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR661AMM/ENCSR661AMM_w_bias.bw", "name": "ENCSR661AMM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR661AMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR661AMM/ENCSR661AMM_wo_bias.bw", "name": "ENCSR661AMM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR661AMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR661AMM/full_ENCSR661AMM.counts.bigwig", "name": "ENCSR661AMM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR661AMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR661AMM/full_ENCSR661AMM.profile.bigwig", "name": "ENCSR661AMM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR661AMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR354FBA/preprocessing/bigWigs/ENCSR354FBA.bigWig", "name": "ENCSR354FBA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR354FBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (115 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354FBA/ENCSR354FBA_w_bias.bw", "name": "ENCSR354FBA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR354FBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (115 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354FBA/ENCSR354FBA_wo_bias.bw", "name": "ENCSR354FBA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR354FBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (115 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354FBA/full_ENCSR354FBA.counts.bigwig", "name": "ENCSR354FBA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR354FBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (115 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354FBA/full_ENCSR354FBA.profile.bigwig", "name": "ENCSR354FBA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR354FBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (115 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR485UQY/preprocessing/bigWigs/ENCSR485UQY.bigWig", "name": "ENCSR485UQY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR485UQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR485UQY/ENCSR485UQY_w_bias.bw", "name": "ENCSR485UQY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR485UQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR485UQY/ENCSR485UQY_wo_bias.bw", "name": "ENCSR485UQY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR485UQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR485UQY/full_ENCSR485UQY.counts.bigwig", "name": "ENCSR485UQY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR485UQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR485UQY/full_ENCSR485UQY.profile.bigwig", "name": "ENCSR485UQY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR485UQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue male adult (60 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR693UHT/preprocessing/bigWigs/ENCSR693UHT.bigWig", "name": "ENCSR693UHT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR693UHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR693UHT/ENCSR693UHT_w_bias.bw", "name": "ENCSR693UHT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR693UHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR693UHT/ENCSR693UHT_wo_bias.bw", "name": "ENCSR693UHT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR693UHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR693UHT/full_ENCSR693UHT.counts.bigwig", "name": "ENCSR693UHT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR693UHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR693UHT/full_ENCSR693UHT.profile.bigwig", "name": "ENCSR693UHT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR693UHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens omental fat pad tissue female adult (51 years)", "biosample term name": "omental fat pad", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR947POC/preprocessing/bigWigs/ENCSR947POC.bigWig", "name": "ENCSR947POC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR947POC" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (104 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947POC/ENCSR947POC_w_bias.bw", "name": "ENCSR947POC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR947POC" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (104 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947POC/ENCSR947POC_wo_bias.bw", "name": "ENCSR947POC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR947POC" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (104 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947POC/full_ENCSR947POC.counts.bigwig", "name": "ENCSR947POC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR947POC" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (104 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947POC/full_ENCSR947POC.profile.bigwig", "name": "ENCSR947POC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR947POC" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (104 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR851ZFT/preprocessing/bigWigs/ENCSR851ZFT.bigWig", "name": "ENCSR851ZFT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR851ZFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (89 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR851ZFT/ENCSR851ZFT_w_bias.bw", "name": "ENCSR851ZFT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR851ZFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (89 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR851ZFT/ENCSR851ZFT_wo_bias.bw", "name": "ENCSR851ZFT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR851ZFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (89 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR851ZFT/full_ENCSR851ZFT.counts.bigwig", "name": "ENCSR851ZFT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR851ZFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (89 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR851ZFT/full_ENCSR851ZFT.profile.bigwig", "name": "ENCSR851ZFT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR851ZFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (89 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR141DMX/preprocessing/bigWigs/ENCSR141DMX.bigWig", "name": "ENCSR141DMX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR141DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (96 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141DMX/ENCSR141DMX_w_bias.bw", "name": "ENCSR141DMX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (96 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141DMX/ENCSR141DMX_wo_bias.bw", "name": "ENCSR141DMX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (96 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141DMX/full_ENCSR141DMX.counts.bigwig", "name": "ENCSR141DMX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (96 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141DMX/full_ENCSR141DMX.profile.bigwig", "name": "ENCSR141DMX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (96 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR696XSJ/preprocessing/bigWigs/ENCSR696XSJ.bigWig", "name": "ENCSR696XSJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR696XSJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (113 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR696XSJ/ENCSR696XSJ_w_bias.bw", "name": "ENCSR696XSJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR696XSJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (113 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR696XSJ/ENCSR696XSJ_wo_bias.bw", "name": "ENCSR696XSJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR696XSJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (113 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR696XSJ/full_ENCSR696XSJ.counts.bigwig", "name": "ENCSR696XSJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR696XSJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (113 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR696XSJ/full_ENCSR696XSJ.profile.bigwig", "name": "ENCSR696XSJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR696XSJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (113 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR141NSQ/preprocessing/bigWigs/ENCSR141NSQ.bigWig", "name": "ENCSR141NSQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR141NSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue male embryo (104 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141NSQ/ENCSR141NSQ_w_bias.bw", "name": "ENCSR141NSQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141NSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue male embryo (104 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141NSQ/ENCSR141NSQ_wo_bias.bw", "name": "ENCSR141NSQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141NSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue male embryo (104 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141NSQ/full_ENCSR141NSQ.counts.bigwig", "name": "ENCSR141NSQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141NSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue male embryo (104 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141NSQ/full_ENCSR141NSQ.profile.bigwig", "name": "ENCSR141NSQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141NSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue male embryo (104 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR595HZQ/preprocessing/bigWigs/ENCSR595HZQ.bigWig", "name": "ENCSR595HZQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR595HZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (30 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595HZQ/ENCSR595HZQ_w_bias.bw", "name": "ENCSR595HZQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR595HZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (30 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595HZQ/ENCSR595HZQ_wo_bias.bw", "name": "ENCSR595HZQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR595HZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (30 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595HZQ/full_ENCSR595HZQ.counts.bigwig", "name": "ENCSR595HZQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR595HZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (30 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595HZQ/full_ENCSR595HZQ.profile.bigwig", "name": "ENCSR595HZQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR595HZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (30 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR678PDD/preprocessing/bigWigs/ENCSR678PDD.bigWig", "name": "ENCSR678PDD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR678PDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens spinal cord tissue female embryo (113 days)", "biosample term name": "spinal cord", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR678PDD/ENCSR678PDD_w_bias.bw", "name": "ENCSR678PDD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR678PDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens spinal cord tissue female embryo (113 days)", "biosample term name": "spinal cord", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR678PDD/ENCSR678PDD_wo_bias.bw", "name": "ENCSR678PDD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR678PDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens spinal cord tissue female embryo (113 days)", "biosample term name": "spinal cord", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR678PDD/full_ENCSR678PDD.counts.bigwig", "name": "ENCSR678PDD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR678PDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens spinal cord tissue female embryo (113 days)", "biosample term name": "spinal cord", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR678PDD/full_ENCSR678PDD.profile.bigwig", "name": "ENCSR678PDD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR678PDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens spinal cord tissue female embryo (113 days)", "biosample term name": "spinal cord", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR932DHT/preprocessing/bigWigs/ENCSR932DHT.bigWig", "name": "ENCSR932DHT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR932DHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932DHT/ENCSR932DHT_w_bias.bw", "name": "ENCSR932DHT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR932DHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932DHT/ENCSR932DHT_wo_bias.bw", "name": "ENCSR932DHT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR932DHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932DHT/full_ENCSR932DHT.counts.bigwig", "name": "ENCSR932DHT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR932DHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932DHT/full_ENCSR932DHT.profile.bigwig", "name": "ENCSR932DHT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR932DHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR272RQX/preprocessing/bigWigs/ENCSR272RQX.bigWig", "name": "ENCSR272RQX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR272RQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue female embryo (113 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR272RQX/ENCSR272RQX_w_bias.bw", "name": "ENCSR272RQX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR272RQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue female embryo (113 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR272RQX/ENCSR272RQX_wo_bias.bw", "name": "ENCSR272RQX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR272RQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue female embryo (113 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR272RQX/full_ENCSR272RQX.counts.bigwig", "name": "ENCSR272RQX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR272RQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue female embryo (113 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR272RQX/full_ENCSR272RQX.profile.bigwig", "name": "ENCSR272RQX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR272RQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue female embryo (113 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR814KRX/preprocessing/bigWigs/ENCSR814KRX.bigWig", "name": "ENCSR814KRX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR814KRX" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT-29", "biosample term name": "HT-29", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814KRX/ENCSR814KRX_w_bias.bw", "name": "ENCSR814KRX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR814KRX" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT-29", "biosample term name": "HT-29", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814KRX/ENCSR814KRX_wo_bias.bw", "name": "ENCSR814KRX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR814KRX" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT-29", "biosample term name": "HT-29", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814KRX/full_ENCSR814KRX.counts.bigwig", "name": "ENCSR814KRX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR814KRX" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT-29", "biosample term name": "HT-29", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814KRX/full_ENCSR814KRX.profile.bigwig", "name": "ENCSR814KRX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR814KRX" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT-29", "biosample term name": "HT-29", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR121ZSL/preprocessing/bigWigs/ENCSR121ZSL.bigWig", "name": "ENCSR121ZSL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR121ZSL" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (21 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121ZSL/ENCSR121ZSL_w_bias.bw", "name": "ENCSR121ZSL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR121ZSL" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (21 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121ZSL/ENCSR121ZSL_wo_bias.bw", "name": "ENCSR121ZSL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR121ZSL" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (21 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121ZSL/full_ENCSR121ZSL.counts.bigwig", "name": "ENCSR121ZSL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR121ZSL" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (21 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121ZSL/full_ENCSR121ZSL.profile.bigwig", "name": "ENCSR121ZSL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR121ZSL" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (21 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR019JDO/preprocessing/bigWigs/ENCSR019JDO.bigWig", "name": "ENCSR019JDO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR019JDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens Karpas-422", "biosample term name": "Karpas-422", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019JDO/ENCSR019JDO_w_bias.bw", "name": "ENCSR019JDO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR019JDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens Karpas-422", "biosample term name": "Karpas-422", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019JDO/ENCSR019JDO_wo_bias.bw", "name": "ENCSR019JDO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR019JDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens Karpas-422", "biosample term name": "Karpas-422", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019JDO/full_ENCSR019JDO.counts.bigwig", "name": "ENCSR019JDO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR019JDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens Karpas-422", "biosample term name": "Karpas-422", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019JDO/full_ENCSR019JDO.profile.bigwig", "name": "ENCSR019JDO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR019JDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens Karpas-422", "biosample term name": "Karpas-422", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR704HNG/preprocessing/bigWigs/ENCSR704HNG.bigWig", "name": "ENCSR704HNG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR704HNG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (21 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR704HNG/ENCSR704HNG_w_bias.bw", "name": "ENCSR704HNG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR704HNG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (21 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR704HNG/ENCSR704HNG_wo_bias.bw", "name": "ENCSR704HNG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR704HNG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (21 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR704HNG/full_ENCSR704HNG.counts.bigwig", "name": "ENCSR704HNG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR704HNG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (21 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR704HNG/full_ENCSR704HNG.profile.bigwig", "name": "ENCSR704HNG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR704HNG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (21 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR337IRF/preprocessing/bigWigs/ENCSR337IRF.bigWig", "name": "ENCSR337IRF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR337IRF" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC", "biosample term name": "RCC", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR337IRF/ENCSR337IRF_w_bias.bw", "name": "ENCSR337IRF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR337IRF" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC", "biosample term name": "RCC", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR337IRF/ENCSR337IRF_wo_bias.bw", "name": "ENCSR337IRF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR337IRF" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC", "biosample term name": "RCC", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR337IRF/full_ENCSR337IRF.counts.bigwig", "name": "ENCSR337IRF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR337IRF" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC", "biosample term name": "RCC", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR337IRF/full_ENCSR337IRF.profile.bigwig", "name": "ENCSR337IRF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR337IRF" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC", "biosample term name": "RCC", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR167JFX/preprocessing/bigWigs/ENCSR167JFX.bigWig", "name": "ENCSR167JFX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR167JFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167JFX/ENCSR167JFX_w_bias.bw", "name": "ENCSR167JFX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR167JFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167JFX/ENCSR167JFX_wo_bias.bw", "name": "ENCSR167JFX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR167JFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167JFX/full_ENCSR167JFX.counts.bigwig", "name": "ENCSR167JFX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR167JFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167JFX/full_ENCSR167JFX.profile.bigwig", "name": "ENCSR167JFX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR167JFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR020LUD/preprocessing/bigWigs/ENCSR020LUD.bigWig", "name": "ENCSR020LUD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR020LUD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR020LUD/ENCSR020LUD_w_bias.bw", "name": "ENCSR020LUD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR020LUD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR020LUD/ENCSR020LUD_wo_bias.bw", "name": "ENCSR020LUD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR020LUD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR020LUD/full_ENCSR020LUD.counts.bigwig", "name": "ENCSR020LUD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR020LUD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR020LUD/full_ENCSR020LUD.profile.bigwig", "name": "ENCSR020LUD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR020LUD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR964MZQ/preprocessing/bigWigs/ENCSR964MZQ.bigWig", "name": "ENCSR964MZQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR964MZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (39 weeks) and embryo (40 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964MZQ/ENCSR964MZQ_w_bias.bw", "name": "ENCSR964MZQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR964MZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (39 weeks) and embryo (40 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964MZQ/ENCSR964MZQ_wo_bias.bw", "name": "ENCSR964MZQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR964MZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (39 weeks) and embryo (40 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964MZQ/full_ENCSR964MZQ.counts.bigwig", "name": "ENCSR964MZQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR964MZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (39 weeks) and embryo (40 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964MZQ/full_ENCSR964MZQ.profile.bigwig", "name": "ENCSR964MZQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR964MZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (39 weeks) and embryo (40 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR548MMD/preprocessing/bigWigs/ENCSR548MMD.bigWig", "name": "ENCSR548MMD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR548MMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens EH", "biosample term name": "EH", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548MMD/ENCSR548MMD_w_bias.bw", "name": "ENCSR548MMD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548MMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens EH", "biosample term name": "EH", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548MMD/ENCSR548MMD_wo_bias.bw", "name": "ENCSR548MMD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548MMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens EH", "biosample term name": "EH", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548MMD/full_ENCSR548MMD.counts.bigwig", "name": "ENCSR548MMD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548MMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens EH", "biosample term name": "EH", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548MMD/full_ENCSR548MMD.profile.bigwig", "name": "ENCSR548MMD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548MMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens EH", "biosample term name": "EH", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR037PGI/preprocessing/bigWigs/ENCSR037PGI.bigWig", "name": "ENCSR037PGI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR037PGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC 7860", "biosample term name": "RCC 7860", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PGI/ENCSR037PGI_w_bias.bw", "name": "ENCSR037PGI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR037PGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC 7860", "biosample term name": "RCC 7860", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PGI/ENCSR037PGI_wo_bias.bw", "name": "ENCSR037PGI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR037PGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC 7860", "biosample term name": "RCC 7860", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PGI/full_ENCSR037PGI.counts.bigwig", "name": "ENCSR037PGI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR037PGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC 7860", "biosample term name": "RCC 7860", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PGI/full_ENCSR037PGI.profile.bigwig", "name": "ENCSR037PGI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR037PGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens RCC 7860", "biosample term name": "RCC 7860", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR314EZY/preprocessing/bigWigs/ENCSR314EZY.bigWig", "name": "ENCSR314EZY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR314EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens L1-S8", "biosample term name": "L1-S8", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314EZY/ENCSR314EZY_w_bias.bw", "name": "ENCSR314EZY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR314EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens L1-S8", "biosample term name": "L1-S8", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314EZY/ENCSR314EZY_wo_bias.bw", "name": "ENCSR314EZY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR314EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens L1-S8", "biosample term name": "L1-S8", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314EZY/full_ENCSR314EZY.counts.bigwig", "name": "ENCSR314EZY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR314EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens L1-S8", "biosample term name": "L1-S8", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314EZY/full_ENCSR314EZY.profile.bigwig", "name": "ENCSR314EZY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR314EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens L1-S8", "biosample term name": "L1-S8", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR217TAW/preprocessing/bigWigs/ENCSR217TAW.bigWig", "name": "ENCSR217TAW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR217TAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23248", "biosample term name": "GM23248", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217TAW/ENCSR217TAW_w_bias.bw", "name": "ENCSR217TAW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217TAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23248", "biosample term name": "GM23248", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217TAW/ENCSR217TAW_wo_bias.bw", "name": "ENCSR217TAW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217TAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23248", "biosample term name": "GM23248", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217TAW/full_ENCSR217TAW.counts.bigwig", "name": "ENCSR217TAW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217TAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23248", "biosample term name": "GM23248", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217TAW/full_ENCSR217TAW.profile.bigwig", "name": "ENCSR217TAW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217TAW" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23248", "biosample term name": "GM23248", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR489NAM/preprocessing/bigWigs/ENCSR489NAM.bigWig", "name": "ENCSR489NAM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR489NAM" ], "assay": "DNASE", "biosample summary": "Homo sapiens OCI-LY7", "biosample term name": "OCI-LY7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR489NAM/ENCSR489NAM_w_bias.bw", "name": "ENCSR489NAM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR489NAM" ], "assay": "DNASE", "biosample summary": "Homo sapiens OCI-LY7", "biosample term name": "OCI-LY7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR489NAM/ENCSR489NAM_wo_bias.bw", "name": "ENCSR489NAM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR489NAM" ], "assay": "DNASE", "biosample summary": "Homo sapiens OCI-LY7", "biosample term name": "OCI-LY7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR489NAM/full_ENCSR489NAM.counts.bigwig", "name": "ENCSR489NAM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR489NAM" ], "assay": "DNASE", "biosample summary": "Homo sapiens OCI-LY7", "biosample term name": "OCI-LY7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR489NAM/full_ENCSR489NAM.profile.bigwig", "name": "ENCSR489NAM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR489NAM" ], "assay": "DNASE", "biosample summary": "Homo sapiens OCI-LY7", "biosample term name": "OCI-LY7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR301OGM/preprocessing/bigWigs/ENCSR301OGM.bigWig", "name": "ENCSR301OGM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR301OGM" ], "assay": "DNASE", "biosample summary": "Homo sapiens NAMALWA treated with Sendai virus for 2 hours", "biosample term name": "NAMALWA", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR301OGM/ENCSR301OGM_w_bias.bw", "name": "ENCSR301OGM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR301OGM" ], "assay": "DNASE", "biosample summary": "Homo sapiens NAMALWA treated with Sendai virus for 2 hours", "biosample term name": "NAMALWA", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR301OGM/ENCSR301OGM_wo_bias.bw", "name": "ENCSR301OGM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR301OGM" ], "assay": "DNASE", "biosample summary": "Homo sapiens NAMALWA treated with Sendai virus for 2 hours", "biosample term name": "NAMALWA", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR301OGM/full_ENCSR301OGM.counts.bigwig", "name": "ENCSR301OGM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR301OGM" ], "assay": "DNASE", "biosample summary": "Homo sapiens NAMALWA treated with Sendai virus for 2 hours", "biosample term name": "NAMALWA", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR301OGM/full_ENCSR301OGM.profile.bigwig", "name": "ENCSR301OGM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR301OGM" ], "assay": "DNASE", "biosample summary": "Homo sapiens NAMALWA treated with Sendai virus for 2 hours", "biosample term name": "NAMALWA", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR373BIX/preprocessing/bigWigs/ENCSR373BIX.bigWig", "name": "ENCSR373BIX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR373BIX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD1c-positive myeloid dendritic cell", "biosample term name": "CD1c-positive myeloid dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373BIX/ENCSR373BIX_w_bias.bw", "name": "ENCSR373BIX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373BIX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD1c-positive myeloid dendritic cell", "biosample term name": "CD1c-positive myeloid dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373BIX/ENCSR373BIX_wo_bias.bw", "name": "ENCSR373BIX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373BIX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD1c-positive myeloid dendritic cell", "biosample term name": "CD1c-positive myeloid dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373BIX/full_ENCSR373BIX.counts.bigwig", "name": "ENCSR373BIX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373BIX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD1c-positive myeloid dendritic cell", "biosample term name": "CD1c-positive myeloid dendritic cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373BIX/full_ENCSR373BIX.profile.bigwig", "name": "ENCSR373BIX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373BIX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD1c-positive myeloid dendritic cell", "biosample term name": "CD1c-positive myeloid dendritic cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR499IFY/preprocessing/bigWigs/ENCSR499IFY.bigWig", "name": "ENCSR499IFY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR499IFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (53 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR499IFY/ENCSR499IFY_w_bias.bw", "name": "ENCSR499IFY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR499IFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (53 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR499IFY/ENCSR499IFY_wo_bias.bw", "name": "ENCSR499IFY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR499IFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (53 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR499IFY/full_ENCSR499IFY.counts.bigwig", "name": "ENCSR499IFY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR499IFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (53 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR499IFY/full_ENCSR499IFY.profile.bigwig", "name": "ENCSR499IFY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR499IFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (53 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR594NOE/preprocessing/bigWigs/ENCSR594NOE.bigWig", "name": "ENCSR594NOE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR594NOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RPMI8226", "biosample term name": "RPMI8226", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR594NOE/ENCSR594NOE_w_bias.bw", "name": "ENCSR594NOE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR594NOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RPMI8226", "biosample term name": "RPMI8226", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR594NOE/ENCSR594NOE_wo_bias.bw", "name": "ENCSR594NOE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR594NOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RPMI8226", "biosample term name": "RPMI8226", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR594NOE/full_ENCSR594NOE.counts.bigwig", "name": "ENCSR594NOE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR594NOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RPMI8226", "biosample term name": "RPMI8226", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR594NOE/full_ENCSR594NOE.profile.bigwig", "name": "ENCSR594NOE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR594NOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RPMI8226", "biosample term name": "RPMI8226", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR136KEL/preprocessing/bigWigs/ENCSR136KEL.bigWig", "name": "ENCSR136KEL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR136KEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney glomerular epithelial cell male adult (43 years) and male adult (62 years)", "biosample term name": "kidney glomerular epithelial cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR136KEL/ENCSR136KEL_w_bias.bw", "name": "ENCSR136KEL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR136KEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney glomerular epithelial cell male adult (43 years) and male adult (62 years)", "biosample term name": "kidney glomerular epithelial cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR136KEL/ENCSR136KEL_wo_bias.bw", "name": "ENCSR136KEL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR136KEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney glomerular epithelial cell male adult (43 years) and male adult (62 years)", "biosample term name": "kidney glomerular epithelial cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR136KEL/full_ENCSR136KEL.counts.bigwig", "name": "ENCSR136KEL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR136KEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney glomerular epithelial cell male adult (43 years) and male adult (62 years)", "biosample term name": "kidney glomerular epithelial cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR136KEL/full_ENCSR136KEL.profile.bigwig", "name": "ENCSR136KEL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR136KEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney glomerular epithelial cell male adult (43 years) and male adult (62 years)", "biosample term name": "kidney glomerular epithelial cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR943SYS/preprocessing/bigWigs/ENCSR943SYS.bigWig", "name": "ENCSR943SYS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR943SYS" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G2 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943SYS/ENCSR943SYS_w_bias.bw", "name": "ENCSR943SYS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943SYS" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G2 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943SYS/ENCSR943SYS_wo_bias.bw", "name": "ENCSR943SYS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943SYS" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G2 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943SYS/full_ENCSR943SYS.counts.bigwig", "name": "ENCSR943SYS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943SYS" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G2 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943SYS/full_ENCSR943SYS.profile.bigwig", "name": "ENCSR943SYS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943SYS" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G2 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR512CWR/preprocessing/bigWigs/ENCSR512CWR.bigWig", "name": "ENCSR512CWR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR512CWR" ], "assay": "DNASE", "biosample summary": "Homo sapiens umbilical cord tissue embryo (59 days) and male embryo (76 days)", "biosample term name": "umbilical cord", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR512CWR/ENCSR512CWR_w_bias.bw", "name": "ENCSR512CWR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR512CWR" ], "assay": "DNASE", "biosample summary": "Homo sapiens umbilical cord tissue embryo (59 days) and male embryo (76 days)", "biosample term name": "umbilical cord", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR512CWR/ENCSR512CWR_wo_bias.bw", "name": "ENCSR512CWR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR512CWR" ], "assay": "DNASE", "biosample summary": "Homo sapiens umbilical cord tissue embryo (59 days) and male embryo (76 days)", "biosample term name": "umbilical cord", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR512CWR/full_ENCSR512CWR.counts.bigwig", "name": "ENCSR512CWR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR512CWR" ], "assay": "DNASE", "biosample summary": "Homo sapiens umbilical cord tissue embryo (59 days) and male embryo (76 days)", "biosample term name": "umbilical cord", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR512CWR/full_ENCSR512CWR.profile.bigwig", "name": "ENCSR512CWR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR512CWR" ], "assay": "DNASE", "biosample summary": "Homo sapiens umbilical cord tissue embryo (59 days) and male embryo (76 days)", "biosample term name": "umbilical cord", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR158YXM/preprocessing/bigWigs/ENCSR158YXM.bigWig", "name": "ENCSR158YXM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR158YXM" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue embryo (59 days) and embryo (80 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR158YXM/ENCSR158YXM_w_bias.bw", "name": "ENCSR158YXM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR158YXM" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue embryo (59 days) and embryo (80 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR158YXM/ENCSR158YXM_wo_bias.bw", "name": "ENCSR158YXM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR158YXM" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue embryo (59 days) and embryo (80 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR158YXM/full_ENCSR158YXM.counts.bigwig", "name": "ENCSR158YXM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR158YXM" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue embryo (59 days) and embryo (80 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR158YXM/full_ENCSR158YXM.profile.bigwig", "name": "ENCSR158YXM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR158YXM" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue embryo (59 days) and embryo (80 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR269SIA/preprocessing/bigWigs/ENCSR269SIA.bigWig", "name": "ENCSR269SIA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR269SIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens G401", "biosample term name": "G401", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR269SIA/ENCSR269SIA_w_bias.bw", "name": "ENCSR269SIA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR269SIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens G401", "biosample term name": "G401", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR269SIA/ENCSR269SIA_wo_bias.bw", "name": "ENCSR269SIA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR269SIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens G401", "biosample term name": "G401", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR269SIA/full_ENCSR269SIA.counts.bigwig", "name": "ENCSR269SIA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR269SIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens G401", "biosample term name": "G401", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR269SIA/full_ENCSR269SIA.profile.bigwig", "name": "ENCSR269SIA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR269SIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens G401", "biosample term name": "G401", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR520WTV/preprocessing/bigWigs/ENCSR520WTV.bigWig", "name": "ENCSR520WTV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR520WTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520WTV/ENCSR520WTV_w_bias.bw", "name": "ENCSR520WTV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR520WTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520WTV/ENCSR520WTV_wo_bias.bw", "name": "ENCSR520WTV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR520WTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520WTV/full_ENCSR520WTV.counts.bigwig", "name": "ENCSR520WTV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR520WTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520WTV/full_ENCSR520WTV.profile.bigwig", "name": "ENCSR520WTV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR520WTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR275ICP/preprocessing/bigWigs/ENCSR275ICP.bigWig", "name": "ENCSR275ICP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR275ICP" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR275ICP/ENCSR275ICP_w_bias.bw", "name": "ENCSR275ICP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR275ICP" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR275ICP/ENCSR275ICP_wo_bias.bw", "name": "ENCSR275ICP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR275ICP" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR275ICP/full_ENCSR275ICP.counts.bigwig", "name": "ENCSR275ICP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR275ICP" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR275ICP/full_ENCSR275ICP.profile.bigwig", "name": "ENCSR275ICP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR275ICP" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR792ZXA/preprocessing/bigWigs/ENCSR792ZXA.bigWig", "name": "ENCSR792ZXA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR792ZXA" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR792ZXA/ENCSR792ZXA_w_bias.bw", "name": "ENCSR792ZXA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR792ZXA" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR792ZXA/ENCSR792ZXA_wo_bias.bw", "name": "ENCSR792ZXA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR792ZXA" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR792ZXA/full_ENCSR792ZXA.counts.bigwig", "name": "ENCSR792ZXA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR792ZXA" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR792ZXA/full_ENCSR792ZXA.profile.bigwig", "name": "ENCSR792ZXA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR792ZXA" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR038XTK/preprocessing/bigWigs/ENCSR038XTK.bigWig", "name": "ENCSR038XTK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR038XTK" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCEC 1CT", "biosample term name": "HCEC 1CT", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038XTK/ENCSR038XTK_w_bias.bw", "name": "ENCSR038XTK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR038XTK" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCEC 1CT", "biosample term name": "HCEC 1CT", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038XTK/ENCSR038XTK_wo_bias.bw", "name": "ENCSR038XTK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR038XTK" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCEC 1CT", "biosample term name": "HCEC 1CT", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038XTK/full_ENCSR038XTK.counts.bigwig", "name": "ENCSR038XTK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR038XTK" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCEC 1CT", "biosample term name": "HCEC 1CT", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038XTK/full_ENCSR038XTK.profile.bigwig", "name": "ENCSR038XTK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR038XTK" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCEC 1CT", "biosample term name": "HCEC 1CT", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR381PXW/preprocessing/bigWigs/ENCSR381PXW.bigWig", "name": "ENCSR381PXW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR381PXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (21 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR381PXW/ENCSR381PXW_w_bias.bw", "name": "ENCSR381PXW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR381PXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (21 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR381PXW/ENCSR381PXW_wo_bias.bw", "name": "ENCSR381PXW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR381PXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (21 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR381PXW/full_ENCSR381PXW.counts.bigwig", "name": "ENCSR381PXW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR381PXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (21 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR381PXW/full_ENCSR381PXW.profile.bigwig", "name": "ENCSR381PXW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR381PXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (21 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR903SKE/preprocessing/bigWigs/ENCSR903SKE.bigWig", "name": "ENCSR903SKE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR903SKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR903SKE/ENCSR903SKE_w_bias.bw", "name": "ENCSR903SKE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR903SKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR903SKE/ENCSR903SKE_wo_bias.bw", "name": "ENCSR903SKE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR903SKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR903SKE/full_ENCSR903SKE.counts.bigwig", "name": "ENCSR903SKE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR903SKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR903SKE/full_ENCSR903SKE.profile.bigwig", "name": "ENCSR903SKE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR903SKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens DND-41", "biosample term name": "DND-41", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR257BGZ/preprocessing/bigWigs/ENCSR257BGZ.bigWig", "name": "ENCSR257BGZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR257BGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens ACHN", "biosample term name": "ACHN", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR257BGZ/ENCSR257BGZ_w_bias.bw", "name": "ENCSR257BGZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR257BGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens ACHN", "biosample term name": "ACHN", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR257BGZ/ENCSR257BGZ_wo_bias.bw", "name": "ENCSR257BGZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR257BGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens ACHN", "biosample term name": "ACHN", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR257BGZ/full_ENCSR257BGZ.counts.bigwig", "name": "ENCSR257BGZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR257BGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens ACHN", "biosample term name": "ACHN", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR257BGZ/full_ENCSR257BGZ.profile.bigwig", "name": "ENCSR257BGZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR257BGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens ACHN", "biosample term name": "ACHN", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR620QNS/preprocessing/bigWigs/ENCSR620QNS.bigWig", "name": "ENCSR620QNS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR620QNS" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620QNS/ENCSR620QNS_w_bias.bw", "name": "ENCSR620QNS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR620QNS" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620QNS/ENCSR620QNS_wo_bias.bw", "name": "ENCSR620QNS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR620QNS" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620QNS/full_ENCSR620QNS.counts.bigwig", "name": "ENCSR620QNS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR620QNS" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620QNS/full_ENCSR620QNS.profile.bigwig", "name": "ENCSR620QNS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR620QNS" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR889WKL/preprocessing/bigWigs/ENCSR889WKL.bigWig", "name": "ENCSR889WKL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR889WKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889WKL/ENCSR889WKL_w_bias.bw", "name": "ENCSR889WKL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR889WKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889WKL/ENCSR889WKL_wo_bias.bw", "name": "ENCSR889WKL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR889WKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889WKL/full_ENCSR889WKL.counts.bigwig", "name": "ENCSR889WKL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR889WKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889WKL/full_ENCSR889WKL.profile.bigwig", "name": "ENCSR889WKL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR889WKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR895KTN/preprocessing/bigWigs/ENCSR895KTN.bigWig", "name": "ENCSR895KTN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR895KTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895KTN/ENCSR895KTN_w_bias.bw", "name": "ENCSR895KTN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895KTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895KTN/ENCSR895KTN_wo_bias.bw", "name": "ENCSR895KTN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895KTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895KTN/full_ENCSR895KTN.counts.bigwig", "name": "ENCSR895KTN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895KTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895KTN/full_ENCSR895KTN.profile.bigwig", "name": "ENCSR895KTN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895KTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens HAP-1", "biosample term name": "HAP-1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR250GDW/preprocessing/bigWigs/ENCSR250GDW.bigWig", "name": "ENCSR250GDW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR250GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-4 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR250GDW/ENCSR250GDW_w_bias.bw", "name": "ENCSR250GDW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR250GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-4 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR250GDW/ENCSR250GDW_wo_bias.bw", "name": "ENCSR250GDW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR250GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-4 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR250GDW/full_ENCSR250GDW.counts.bigwig", "name": "ENCSR250GDW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR250GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-4 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR250GDW/full_ENCSR250GDW.profile.bigwig", "name": "ENCSR250GDW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR250GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-4 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR595CSH/preprocessing/bigWigs/ENCSR595CSH.bigWig", "name": "ENCSR595CSH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR595CSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue embryo (56 days) and male embryo (58 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595CSH/ENCSR595CSH_w_bias.bw", "name": "ENCSR595CSH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR595CSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue embryo (56 days) and male embryo (58 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595CSH/ENCSR595CSH_wo_bias.bw", "name": "ENCSR595CSH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR595CSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue embryo (56 days) and male embryo (58 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595CSH/full_ENCSR595CSH.counts.bigwig", "name": "ENCSR595CSH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR595CSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue embryo (56 days) and male embryo (58 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR595CSH/full_ENCSR595CSH.profile.bigwig", "name": "ENCSR595CSH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR595CSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue embryo (56 days) and male embryo (58 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPL/preprocessing/bigWigs/ENCSR000EPL.bigWig", "name": "ENCSR000EPL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens NB4", "biosample term name": "NB4", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPL/ENCSR000EPL_w_bias.bw", "name": "ENCSR000EPL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens NB4", "biosample term name": "NB4", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPL/ENCSR000EPL_wo_bias.bw", "name": "ENCSR000EPL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens NB4", "biosample term name": "NB4", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPL/full_ENCSR000EPL.counts.bigwig", "name": "ENCSR000EPL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens NB4", "biosample term name": "NB4", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPL/full_ENCSR000EPL.profile.bigwig", "name": "ENCSR000EPL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens NB4", "biosample term name": "NB4", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR004SUL/preprocessing/bigWigs/ENCSR004SUL.bigWig", "name": "ENCSR004SUL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR004SUL" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338 originated from GM23248", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR004SUL/ENCSR004SUL_w_bias.bw", "name": "ENCSR004SUL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR004SUL" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338 originated from GM23248", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR004SUL/ENCSR004SUL_wo_bias.bw", "name": "ENCSR004SUL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR004SUL" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338 originated from GM23248", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR004SUL/full_ENCSR004SUL.counts.bigwig", "name": "ENCSR004SUL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR004SUL" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338 originated from GM23248", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR004SUL/full_ENCSR004SUL.profile.bigwig", "name": "ENCSR004SUL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR004SUL" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338 originated from GM23248", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR672EWY/preprocessing/bigWigs/ENCSR672EWY.bigWig", "name": "ENCSR672EWY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR672EWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFFc6", "biosample term name": "HFFc6", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR672EWY/ENCSR672EWY_w_bias.bw", "name": "ENCSR672EWY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR672EWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFFc6", "biosample term name": "HFFc6", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR672EWY/ENCSR672EWY_wo_bias.bw", "name": "ENCSR672EWY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR672EWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFFc6", "biosample term name": "HFFc6", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR672EWY/full_ENCSR672EWY.counts.bigwig", "name": "ENCSR672EWY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR672EWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFFc6", "biosample term name": "HFFc6", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR672EWY/full_ENCSR672EWY.profile.bigwig", "name": "ENCSR672EWY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR672EWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFFc6", "biosample term name": "HFFc6", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR503BEM/preprocessing/bigWigs/ENCSR503BEM.bigWig", "name": "ENCSR503BEM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR503BEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens LoVo", "biosample term name": "LoVo", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503BEM/ENCSR503BEM_w_bias.bw", "name": "ENCSR503BEM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR503BEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens LoVo", "biosample term name": "LoVo", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503BEM/ENCSR503BEM_wo_bias.bw", "name": "ENCSR503BEM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR503BEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens LoVo", "biosample term name": "LoVo", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503BEM/full_ENCSR503BEM.counts.bigwig", "name": "ENCSR503BEM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR503BEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens LoVo", "biosample term name": "LoVo", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503BEM/full_ENCSR503BEM.profile.bigwig", "name": "ENCSR503BEM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR503BEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens LoVo", "biosample term name": "LoVo", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR964WHY/preprocessing/bigWigs/ENCSR964WHY.bigWig", "name": "ENCSR964WHY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR964WHY" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1b phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964WHY/ENCSR964WHY_w_bias.bw", "name": "ENCSR964WHY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR964WHY" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1b phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964WHY/ENCSR964WHY_wo_bias.bw", "name": "ENCSR964WHY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR964WHY" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1b phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964WHY/full_ENCSR964WHY.counts.bigwig", "name": "ENCSR964WHY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR964WHY" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1b phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR964WHY/full_ENCSR964WHY.profile.bigwig", "name": "ENCSR964WHY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR964WHY" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1b phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR217SET/preprocessing/bigWigs/ENCSR217SET.bigWig", "name": "ENCSR217SET observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR217SET" ], "assay": "DNASE", "biosample summary": "Homo sapiens SW480", "biosample term name": "SW480", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217SET/ENCSR217SET_w_bias.bw", "name": "ENCSR217SET DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217SET" ], "assay": "DNASE", "biosample summary": "Homo sapiens SW480", "biosample term name": "SW480", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217SET/ENCSR217SET_wo_bias.bw", "name": "ENCSR217SET DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217SET" ], "assay": "DNASE", "biosample summary": "Homo sapiens SW480", "biosample term name": "SW480", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217SET/full_ENCSR217SET.counts.bigwig", "name": "ENCSR217SET DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217SET" ], "assay": "DNASE", "biosample summary": "Homo sapiens SW480", "biosample term name": "SW480", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217SET/full_ENCSR217SET.profile.bigwig", "name": "ENCSR217SET DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217SET" ], "assay": "DNASE", "biosample summary": "Homo sapiens SW480", "biosample term name": "SW480", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR017OZH/preprocessing/bigWigs/ENCSR017OZH.bigWig", "name": "ENCSR017OZH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR017OZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 S1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR017OZH/ENCSR017OZH_w_bias.bw", "name": "ENCSR017OZH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR017OZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 S1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR017OZH/ENCSR017OZH_wo_bias.bw", "name": "ENCSR017OZH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR017OZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 S1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR017OZH/full_ENCSR017OZH.counts.bigwig", "name": "ENCSR017OZH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR017OZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 S1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR017OZH/full_ENCSR017OZH.profile.bigwig", "name": "ENCSR017OZH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR017OZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 S1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR218FSP/preprocessing/bigWigs/ENCSR218FSP.bigWig", "name": "ENCSR218FSP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR218FSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FSP/ENCSR218FSP_w_bias.bw", "name": "ENCSR218FSP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR218FSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FSP/ENCSR218FSP_wo_bias.bw", "name": "ENCSR218FSP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR218FSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FSP/full_ENCSR218FSP.counts.bigwig", "name": "ENCSR218FSP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR218FSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FSP/full_ENCSR218FSP.profile.bigwig", "name": "ENCSR218FSP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR218FSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR754LIN/preprocessing/bigWigs/ENCSR754LIN.bigWig", "name": "ENCSR754LIN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR754LIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR754LIN/ENCSR754LIN_w_bias.bw", "name": "ENCSR754LIN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR754LIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR754LIN/ENCSR754LIN_wo_bias.bw", "name": "ENCSR754LIN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR754LIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR754LIN/full_ENCSR754LIN.counts.bigwig", "name": "ENCSR754LIN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR754LIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR754LIN/full_ENCSR754LIN.profile.bigwig", "name": "ENCSR754LIN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR754LIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9 G1 phase stably expressing CDT1, stably expressing GMNN", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR452DCM/preprocessing/bigWigs/ENCSR452DCM.bigWig", "name": "ENCSR452DCM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR452DCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (21 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452DCM/ENCSR452DCM_w_bias.bw", "name": "ENCSR452DCM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452DCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (21 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452DCM/ENCSR452DCM_wo_bias.bw", "name": "ENCSR452DCM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452DCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (21 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452DCM/full_ENCSR452DCM.counts.bigwig", "name": "ENCSR452DCM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452DCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (21 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452DCM/full_ENCSR452DCM.profile.bigwig", "name": "ENCSR452DCM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452DCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (21 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR265TEK/preprocessing/bigWigs/ENCSR265TEK.bigWig", "name": "ENCSR265TEK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR265TEK" ], "assay": "DNASE", "biosample summary": "Homo sapiens NCI-H226", "biosample term name": "NCI-H226", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR265TEK/ENCSR265TEK_w_bias.bw", "name": "ENCSR265TEK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR265TEK" ], "assay": "DNASE", "biosample summary": "Homo sapiens NCI-H226", "biosample term name": "NCI-H226", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR265TEK/ENCSR265TEK_wo_bias.bw", "name": "ENCSR265TEK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR265TEK" ], "assay": "DNASE", "biosample summary": "Homo sapiens NCI-H226", "biosample term name": "NCI-H226", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR265TEK/full_ENCSR265TEK.counts.bigwig", "name": "ENCSR265TEK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR265TEK" ], "assay": "DNASE", "biosample summary": "Homo sapiens NCI-H226", "biosample term name": "NCI-H226", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR265TEK/full_ENCSR265TEK.profile.bigwig", "name": "ENCSR265TEK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR265TEK" ], "assay": "DNASE", "biosample summary": "Homo sapiens NCI-H226", "biosample term name": "NCI-H226", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR373TLU/preprocessing/bigWigs/ENCSR373TLU.bigWig", "name": "ENCSR373TLU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR373TLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373TLU/ENCSR373TLU_w_bias.bw", "name": "ENCSR373TLU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373TLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373TLU/ENCSR373TLU_wo_bias.bw", "name": "ENCSR373TLU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR373TLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373TLU/full_ENCSR373TLU.counts.bigwig", "name": "ENCSR373TLU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373TLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR373TLU/full_ENCSR373TLU.profile.bigwig", "name": "ENCSR373TLU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR373TLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000FDI/preprocessing/bigWigs/ENCSR000FDI.bigWig", "name": "ENCSR000FDI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000FDI" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT1080", "biosample term name": "HT1080", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000FDI/ENCSR000FDI_w_bias.bw", "name": "ENCSR000FDI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000FDI" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT1080", "biosample term name": "HT1080", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000FDI/ENCSR000FDI_wo_bias.bw", "name": "ENCSR000FDI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000FDI" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT1080", "biosample term name": "HT1080", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000FDI/full_ENCSR000FDI.counts.bigwig", "name": "ENCSR000FDI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000FDI" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT1080", "biosample term name": "HT1080", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000FDI/full_ENCSR000FDI.profile.bigwig", "name": "ENCSR000FDI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000FDI" ], "assay": "DNASE", "biosample summary": "Homo sapiens HT1080", "biosample term name": "HT1080", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR111WTE/preprocessing/bigWigs/ENCSR111WTE.bigWig", "name": "ENCSR111WTE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR111WTE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon alpha-2 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111WTE/ENCSR111WTE_w_bias.bw", "name": "ENCSR111WTE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR111WTE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon alpha-2 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111WTE/ENCSR111WTE_wo_bias.bw", "name": "ENCSR111WTE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR111WTE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon alpha-2 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111WTE/full_ENCSR111WTE.counts.bigwig", "name": "ENCSR111WTE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR111WTE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon alpha-2 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111WTE/full_ENCSR111WTE.profile.bigwig", "name": "ENCSR111WTE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR111WTE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon alpha-2 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR818JGZ/preprocessing/bigWigs/ENCSR818JGZ.bigWig", "name": "ENCSR818JGZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR818JGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens limb tissue embryo (53 days) and embryo (56 days)", "biosample term name": "limb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818JGZ/ENCSR818JGZ_w_bias.bw", "name": "ENCSR818JGZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR818JGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens limb tissue embryo (53 days) and embryo (56 days)", "biosample term name": "limb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818JGZ/ENCSR818JGZ_wo_bias.bw", "name": "ENCSR818JGZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR818JGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens limb tissue embryo (53 days) and embryo (56 days)", "biosample term name": "limb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818JGZ/full_ENCSR818JGZ.counts.bigwig", "name": "ENCSR818JGZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR818JGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens limb tissue embryo (53 days) and embryo (56 days)", "biosample term name": "limb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818JGZ/full_ENCSR818JGZ.profile.bigwig", "name": "ENCSR818JGZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR818JGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens limb tissue embryo (53 days) and embryo (56 days)", "biosample term name": "limb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR759UNY/preprocessing/bigWigs/ENCSR759UNY.bigWig", "name": "ENCSR759UNY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR759UNY" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue female embryo (59 days) and female embryo (76 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR759UNY/ENCSR759UNY_w_bias.bw", "name": "ENCSR759UNY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR759UNY" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue female embryo (59 days) and female embryo (76 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR759UNY/ENCSR759UNY_wo_bias.bw", "name": "ENCSR759UNY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR759UNY" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue female embryo (59 days) and female embryo (76 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR759UNY/full_ENCSR759UNY.counts.bigwig", "name": "ENCSR759UNY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR759UNY" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue female embryo (59 days) and female embryo (76 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR759UNY/full_ENCSR759UNY.profile.bigwig", "name": "ENCSR759UNY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR759UNY" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue female embryo (59 days) and female embryo (76 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR030HFV/preprocessing/bigWigs/ENCSR030HFV.bigWig", "name": "ENCSR030HFV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR030HFV" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR030HFV/ENCSR030HFV_w_bias.bw", "name": "ENCSR030HFV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR030HFV" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR030HFV/ENCSR030HFV_wo_bias.bw", "name": "ENCSR030HFV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR030HFV" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR030HFV/full_ENCSR030HFV.counts.bigwig", "name": "ENCSR030HFV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR030HFV" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR030HFV/full_ENCSR030HFV.profile.bigwig", "name": "ENCSR030HFV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR030HFV" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR153LHP/preprocessing/bigWigs/ENCSR153LHP.bigWig", "name": "ENCSR153LHP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR153LHP" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR153LHP/ENCSR153LHP_w_bias.bw", "name": "ENCSR153LHP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR153LHP" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR153LHP/ENCSR153LHP_wo_bias.bw", "name": "ENCSR153LHP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR153LHP" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR153LHP/full_ENCSR153LHP.counts.bigwig", "name": "ENCSR153LHP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR153LHP" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR153LHP/full_ENCSR153LHP.profile.bigwig", "name": "ENCSR153LHP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR153LHP" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR240TPI/preprocessing/bigWigs/ENCSR240TPI.bigWig", "name": "ENCSR240TPI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR240TPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens ELR", "biosample term name": "ELR", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TPI/ENCSR240TPI_w_bias.bw", "name": "ENCSR240TPI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR240TPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens ELR", "biosample term name": "ELR", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TPI/ENCSR240TPI_wo_bias.bw", "name": "ENCSR240TPI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR240TPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens ELR", "biosample term name": "ELR", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TPI/full_ENCSR240TPI.counts.bigwig", "name": "ENCSR240TPI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR240TPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens ELR", "biosample term name": "ELR", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TPI/full_ENCSR240TPI.profile.bigwig", "name": "ENCSR240TPI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR240TPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens ELR", "biosample term name": "ELR", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR940NLN/preprocessing/bigWigs/ENCSR940NLN.bigWig", "name": "ENCSR940NLN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR940NLN" ], "assay": "DNASE", "biosample summary": "Homo sapiens PC-9", "biosample term name": "PC-9", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR940NLN/ENCSR940NLN_w_bias.bw", "name": "ENCSR940NLN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR940NLN" ], "assay": "DNASE", "biosample summary": "Homo sapiens PC-9", "biosample term name": "PC-9", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR940NLN/ENCSR940NLN_wo_bias.bw", "name": "ENCSR940NLN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR940NLN" ], "assay": "DNASE", "biosample summary": "Homo sapiens PC-9", "biosample term name": "PC-9", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR940NLN/full_ENCSR940NLN.counts.bigwig", "name": "ENCSR940NLN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR940NLN" ], "assay": "DNASE", "biosample summary": "Homo sapiens PC-9", "biosample term name": "PC-9", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR940NLN/full_ENCSR940NLN.profile.bigwig", "name": "ENCSR940NLN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR940NLN" ], "assay": "DNASE", "biosample summary": "Homo sapiens PC-9", "biosample term name": "PC-9", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ENA/preprocessing/bigWigs/ENCSR000ENA.bigWig", "name": "ENCSR000ENA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ENA" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte of the hippocampus", "biosample term name": "astrocyte of the hippocampus", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENA/ENCSR000ENA_w_bias.bw", "name": "ENCSR000ENA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENA" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte of the hippocampus", "biosample term name": "astrocyte of the hippocampus", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENA/ENCSR000ENA_wo_bias.bw", "name": "ENCSR000ENA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENA" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte of the hippocampus", "biosample term name": "astrocyte of the hippocampus", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENA/full_ENCSR000ENA.counts.bigwig", "name": "ENCSR000ENA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENA" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte of the hippocampus", "biosample term name": "astrocyte of the hippocampus", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENA/full_ENCSR000ENA.profile.bigwig", "name": "ENCSR000ENA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENA" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte of the hippocampus", "biosample term name": "astrocyte of the hippocampus", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR267UFM/preprocessing/bigWigs/ENCSR267UFM.bigWig", "name": "ENCSR267UFM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR267UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR267UFM/ENCSR267UFM_w_bias.bw", "name": "ENCSR267UFM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR267UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR267UFM/ENCSR267UFM_wo_bias.bw", "name": "ENCSR267UFM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR267UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR267UFM/full_ENCSR267UFM.counts.bigwig", "name": "ENCSR267UFM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR267UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR267UFM/full_ENCSR267UFM.profile.bigwig", "name": "ENCSR267UFM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR267UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR314IOV/preprocessing/bigWigs/ENCSR314IOV.bigWig", "name": "ENCSR314IOV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR314IOV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-1 beta for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IOV/ENCSR314IOV_w_bias.bw", "name": "ENCSR314IOV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR314IOV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-1 beta for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IOV/ENCSR314IOV_wo_bias.bw", "name": "ENCSR314IOV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR314IOV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-1 beta for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IOV/full_ENCSR314IOV.counts.bigwig", "name": "ENCSR314IOV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR314IOV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-1 beta for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IOV/full_ENCSR314IOV.profile.bigwig", "name": "ENCSR314IOV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR314IOV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-1 beta for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR685PCS/preprocessing/bigWigs/ENCSR685PCS.bigWig", "name": "ENCSR685PCS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR685PCS" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR685PCS/ENCSR685PCS_w_bias.bw", "name": "ENCSR685PCS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR685PCS" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR685PCS/ENCSR685PCS_wo_bias.bw", "name": "ENCSR685PCS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR685PCS" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR685PCS/full_ENCSR685PCS.counts.bigwig", "name": "ENCSR685PCS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR685PCS" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR685PCS/full_ENCSR685PCS.profile.bigwig", "name": "ENCSR685PCS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR685PCS" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR306BHE/preprocessing/bigWigs/ENCSR306BHE.bigWig", "name": "ENCSR306BHE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR306BHE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306BHE/ENCSR306BHE_w_bias.bw", "name": "ENCSR306BHE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR306BHE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306BHE/ENCSR306BHE_wo_bias.bw", "name": "ENCSR306BHE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR306BHE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306BHE/full_ENCSR306BHE.counts.bigwig", "name": "ENCSR306BHE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR306BHE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306BHE/full_ENCSR306BHE.profile.bigwig", "name": "ENCSR306BHE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR306BHE" ], "assay": "DNASE", "biosample summary": "Homo sapiens RWPE2", "biosample term name": "RWPE2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR316UDN/preprocessing/bigWigs/ENCSR316UDN.bigWig", "name": "ENCSR316UDN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR316UDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR316UDN/ENCSR316UDN_w_bias.bw", "name": "ENCSR316UDN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR316UDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR316UDN/ENCSR316UDN_wo_bias.bw", "name": "ENCSR316UDN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR316UDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR316UDN/full_ENCSR316UDN.counts.bigwig", "name": "ENCSR316UDN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR316UDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR316UDN/full_ENCSR316UDN.profile.bigwig", "name": "ENCSR316UDN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR316UDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (37 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR208DMX/preprocessing/bigWigs/ENCSR208DMX.bigWig", "name": "ENCSR208DMX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR208DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female embryo (98 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208DMX/ENCSR208DMX_w_bias.bw", "name": "ENCSR208DMX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR208DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female embryo (98 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208DMX/ENCSR208DMX_wo_bias.bw", "name": "ENCSR208DMX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR208DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female embryo (98 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208DMX/full_ENCSR208DMX.counts.bigwig", "name": "ENCSR208DMX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR208DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female embryo (98 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR208DMX/full_ENCSR208DMX.profile.bigwig", "name": "ENCSR208DMX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR208DMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female embryo (98 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR620WAR/preprocessing/bigWigs/ENCSR620WAR.bigWig", "name": "ENCSR620WAR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR620WAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620WAR/ENCSR620WAR_w_bias.bw", "name": "ENCSR620WAR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR620WAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620WAR/ENCSR620WAR_wo_bias.bw", "name": "ENCSR620WAR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR620WAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620WAR/full_ENCSR620WAR.counts.bigwig", "name": "ENCSR620WAR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR620WAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR620WAR/full_ENCSR620WAR.profile.bigwig", "name": "ENCSR620WAR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR620WAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens SJSA1", "biosample term name": "SJSA1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR395EZY/preprocessing/bigWigs/ENCSR395EZY.bigWig", "name": "ENCSR395EZY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR395EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395EZY/ENCSR395EZY_w_bias.bw", "name": "ENCSR395EZY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR395EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395EZY/ENCSR395EZY_wo_bias.bw", "name": "ENCSR395EZY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR395EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395EZY/full_ENCSR395EZY.counts.bigwig", "name": "ENCSR395EZY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR395EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395EZY/full_ENCSR395EZY.profile.bigwig", "name": "ENCSR395EZY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR395EZY" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR559WMK/preprocessing/bigWigs/ENCSR559WMK.bigWig", "name": "ENCSR559WMK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR559WMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue male embryo (72 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR559WMK/ENCSR559WMK_w_bias.bw", "name": "ENCSR559WMK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR559WMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue male embryo (72 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR559WMK/ENCSR559WMK_wo_bias.bw", "name": "ENCSR559WMK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR559WMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue male embryo (72 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR559WMK/full_ENCSR559WMK.counts.bigwig", "name": "ENCSR559WMK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR559WMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue male embryo (72 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR559WMK/full_ENCSR559WMK.profile.bigwig", "name": "ENCSR559WMK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR559WMK" ], "assay": "DNASE", "biosample summary": "Homo sapiens tongue tissue male embryo (72 days)", "biosample term name": "tongue", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR752EPH/preprocessing/bigWigs/ENCSR752EPH.bigWig", "name": "ENCSR752EPH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR752EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A treated with 1 \u03bcM tamoxifen for 24 hours", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR752EPH/ENCSR752EPH_w_bias.bw", "name": "ENCSR752EPH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR752EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A treated with 1 \u03bcM tamoxifen for 24 hours", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR752EPH/ENCSR752EPH_wo_bias.bw", "name": "ENCSR752EPH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR752EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A treated with 1 \u03bcM tamoxifen for 24 hours", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR752EPH/full_ENCSR752EPH.counts.bigwig", "name": "ENCSR752EPH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR752EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A treated with 1 \u03bcM tamoxifen for 24 hours", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR752EPH/full_ENCSR752EPH.profile.bigwig", "name": "ENCSR752EPH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR752EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A treated with 1 \u03bcM tamoxifen for 24 hours", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR683QJJ/preprocessing/bigWigs/ENCSR683QJJ.bigWig", "name": "ENCSR683QJJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR683QJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR683QJJ/ENCSR683QJJ_w_bias.bw", "name": "ENCSR683QJJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR683QJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR683QJJ/ENCSR683QJJ_wo_bias.bw", "name": "ENCSR683QJJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR683QJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR683QJJ/full_ENCSR683QJJ.counts.bigwig", "name": "ENCSR683QJJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR683QJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR683QJJ/full_ENCSR683QJJ.profile.bigwig", "name": "ENCSR683QJJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR683QJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR860UTH/preprocessing/bigWigs/ENCSR860UTH.bigWig", "name": "ENCSR860UTH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR860UTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860UTH/ENCSR860UTH_w_bias.bw", "name": "ENCSR860UTH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR860UTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860UTH/ENCSR860UTH_wo_bias.bw", "name": "ENCSR860UTH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR860UTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860UTH/full_ENCSR860UTH.counts.bigwig", "name": "ENCSR860UTH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR860UTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860UTH/full_ENCSR860UTH.profile.bigwig", "name": "ENCSR860UTH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR860UTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR207TUX/preprocessing/bigWigs/ENCSR207TUX.bigWig", "name": "ENCSR207TUX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR207TUX" ], "assay": "DNASE", "biosample summary": "Homo sapiens amniotic stem cell male embryo (15 weeks)", "biosample term name": "amniotic stem cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207TUX/ENCSR207TUX_w_bias.bw", "name": "ENCSR207TUX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR207TUX" ], "assay": "DNASE", "biosample summary": "Homo sapiens amniotic stem cell male embryo (15 weeks)", "biosample term name": "amniotic stem cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207TUX/ENCSR207TUX_wo_bias.bw", "name": "ENCSR207TUX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR207TUX" ], "assay": "DNASE", "biosample summary": "Homo sapiens amniotic stem cell male embryo (15 weeks)", "biosample term name": "amniotic stem cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207TUX/full_ENCSR207TUX.counts.bigwig", "name": "ENCSR207TUX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR207TUX" ], "assay": "DNASE", "biosample summary": "Homo sapiens amniotic stem cell male embryo (15 weeks)", "biosample term name": "amniotic stem cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207TUX/full_ENCSR207TUX.profile.bigwig", "name": "ENCSR207TUX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR207TUX" ], "assay": "DNASE", "biosample summary": "Homo sapiens amniotic stem cell male embryo (15 weeks)", "biosample term name": "amniotic stem cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR959ZXU/preprocessing/bigWigs/ENCSR959ZXU.bigWig", "name": "ENCSR959ZXU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR959ZXU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR959ZXU/ENCSR959ZXU_w_bias.bw", "name": "ENCSR959ZXU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR959ZXU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR959ZXU/ENCSR959ZXU_wo_bias.bw", "name": "ENCSR959ZXU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR959ZXU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR959ZXU/full_ENCSR959ZXU.counts.bigwig", "name": "ENCSR959ZXU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR959ZXU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR959ZXU/full_ENCSR959ZXU.profile.bigwig", "name": "ENCSR959ZXU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR959ZXU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR757NJT/preprocessing/bigWigs/ENCSR757NJT.bigWig", "name": "ENCSR757NJT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR757NJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757NJT/ENCSR757NJT_w_bias.bw", "name": "ENCSR757NJT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR757NJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757NJT/ENCSR757NJT_wo_bias.bw", "name": "ENCSR757NJT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR757NJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757NJT/full_ENCSR757NJT.counts.bigwig", "name": "ENCSR757NJT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR757NJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757NJT/full_ENCSR757NJT.profile.bigwig", "name": "ENCSR757NJT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR757NJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue male adult (60 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR785ZUI/preprocessing/bigWigs/ENCSR785ZUI.bigWig", "name": "ENCSR785ZUI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR785ZUI" ], "assay": "DNASE", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785ZUI/ENCSR785ZUI_w_bias.bw", "name": "ENCSR785ZUI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR785ZUI" ], "assay": "DNASE", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785ZUI/ENCSR785ZUI_wo_bias.bw", "name": "ENCSR785ZUI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR785ZUI" ], "assay": "DNASE", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785ZUI/full_ENCSR785ZUI.counts.bigwig", "name": "ENCSR785ZUI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR785ZUI" ], "assay": "DNASE", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785ZUI/full_ENCSR785ZUI.profile.bigwig", "name": "ENCSR785ZUI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR785ZUI" ], "assay": "DNASE", "biosample summary": "Homo sapiens WTC11", "biosample term name": "WTC11", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR477RTP/preprocessing/bigWigs/ENCSR477RTP.bigWig", "name": "ENCSR477RTP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR477RTP" ], "assay": "DNASE", "biosample summary": "Homo sapiens IMR-90", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR477RTP/ENCSR477RTP_w_bias.bw", "name": "ENCSR477RTP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR477RTP" ], "assay": "DNASE", "biosample summary": "Homo sapiens IMR-90", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR477RTP/ENCSR477RTP_wo_bias.bw", "name": "ENCSR477RTP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR477RTP" ], "assay": "DNASE", "biosample summary": "Homo sapiens IMR-90", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR477RTP/full_ENCSR477RTP.counts.bigwig", "name": "ENCSR477RTP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR477RTP" ], "assay": "DNASE", "biosample summary": "Homo sapiens IMR-90", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR477RTP/full_ENCSR477RTP.profile.bigwig", "name": "ENCSR477RTP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR477RTP" ], "assay": "DNASE", "biosample summary": "Homo sapiens IMR-90", "biosample term name": "IMR-90", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMB/preprocessing/bigWigs/ENCSR000EMB.bigWig", "name": "ENCSR000EMB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMB" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG10803", "biosample term name": "AG10803", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMB/ENCSR000EMB_w_bias.bw", "name": "ENCSR000EMB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMB" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG10803", "biosample term name": "AG10803", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMB/ENCSR000EMB_wo_bias.bw", "name": "ENCSR000EMB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMB" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG10803", "biosample term name": "AG10803", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMB/full_ENCSR000EMB.counts.bigwig", "name": "ENCSR000EMB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMB" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG10803", "biosample term name": "AG10803", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMB/full_ENCSR000EMB.profile.bigwig", "name": "ENCSR000EMB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMB" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG10803", "biosample term name": "AG10803", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR690CVL/preprocessing/bigWigs/ENCSR690CVL.bigWig", "name": "ENCSR690CVL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR690CVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR690CVL/ENCSR690CVL_w_bias.bw", "name": "ENCSR690CVL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR690CVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR690CVL/ENCSR690CVL_wo_bias.bw", "name": "ENCSR690CVL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR690CVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR690CVL/full_ENCSR690CVL.counts.bigwig", "name": "ENCSR690CVL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR690CVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR690CVL/full_ENCSR690CVL.profile.bigwig", "name": "ENCSR690CVL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR690CVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR083STA/preprocessing/bigWigs/ENCSR083STA.bigWig", "name": "ENCSR083STA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR083STA" ], "assay": "DNASE", "biosample summary": "Homo sapiens MG63", "biosample term name": "MG63", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR083STA/ENCSR083STA_w_bias.bw", "name": "ENCSR083STA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR083STA" ], "assay": "DNASE", "biosample summary": "Homo sapiens MG63", "biosample term name": "MG63", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR083STA/ENCSR083STA_wo_bias.bw", "name": "ENCSR083STA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR083STA" ], "assay": "DNASE", "biosample summary": "Homo sapiens MG63", "biosample term name": "MG63", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR083STA/full_ENCSR083STA.counts.bigwig", "name": "ENCSR083STA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR083STA" ], "assay": "DNASE", "biosample summary": "Homo sapiens MG63", "biosample term name": "MG63", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR083STA/full_ENCSR083STA.profile.bigwig", "name": "ENCSR083STA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR083STA" ], "assay": "DNASE", "biosample summary": "Homo sapiens MG63", "biosample term name": "MG63", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR128GBN/preprocessing/bigWigs/ENCSR128GBN.bigWig", "name": "ENCSR128GBN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR128GBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (53 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR128GBN/ENCSR128GBN_w_bias.bw", "name": "ENCSR128GBN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR128GBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (53 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR128GBN/ENCSR128GBN_wo_bias.bw", "name": "ENCSR128GBN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR128GBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (53 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR128GBN/full_ENCSR128GBN.counts.bigwig", "name": "ENCSR128GBN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR128GBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (53 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR128GBN/full_ENCSR128GBN.profile.bigwig", "name": "ENCSR128GBN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR128GBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (53 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR581LHW/preprocessing/bigWigs/ENCSR581LHW.bigWig", "name": "ENCSR581LHW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR581LHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581LHW/ENCSR581LHW_w_bias.bw", "name": "ENCSR581LHW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR581LHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581LHW/ENCSR581LHW_wo_bias.bw", "name": "ENCSR581LHW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR581LHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581LHW/full_ENCSR581LHW.counts.bigwig", "name": "ENCSR581LHW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR581LHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581LHW/full_ENCSR581LHW.profile.bigwig", "name": "ENCSR581LHW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR581LHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR426TPQ/preprocessing/bigWigs/ENCSR426TPQ.bigWig", "name": "ENCSR426TPQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR426TPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue male child (3 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426TPQ/ENCSR426TPQ_w_bias.bw", "name": "ENCSR426TPQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR426TPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue male child (3 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426TPQ/ENCSR426TPQ_wo_bias.bw", "name": "ENCSR426TPQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR426TPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue male child (3 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426TPQ/full_ENCSR426TPQ.counts.bigwig", "name": "ENCSR426TPQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR426TPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue male child (3 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426TPQ/full_ENCSR426TPQ.profile.bigwig", "name": "ENCSR426TPQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR426TPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue male child (3 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR818HHN/preprocessing/bigWigs/ENCSR818HHN.bigWig", "name": "ENCSR818HHN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR818HHN" ], "assay": "DNASE", "biosample summary": "Homo sapiens osteocyte", "biosample term name": "osteocyte", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818HHN/ENCSR818HHN_w_bias.bw", "name": "ENCSR818HHN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR818HHN" ], "assay": "DNASE", "biosample summary": "Homo sapiens osteocyte", "biosample term name": "osteocyte", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818HHN/ENCSR818HHN_wo_bias.bw", "name": "ENCSR818HHN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR818HHN" ], "assay": "DNASE", "biosample summary": "Homo sapiens osteocyte", "biosample term name": "osteocyte", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818HHN/full_ENCSR818HHN.counts.bigwig", "name": "ENCSR818HHN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR818HHN" ], "assay": "DNASE", "biosample summary": "Homo sapiens osteocyte", "biosample term name": "osteocyte", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR818HHN/full_ENCSR818HHN.profile.bigwig", "name": "ENCSR818HHN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR818HHN" ], "assay": "DNASE", "biosample summary": "Homo sapiens osteocyte", "biosample term name": "osteocyte", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR217RVH/preprocessing/bigWigs/ENCSR217RVH.bigWig", "name": "ENCSR217RVH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR217RVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217RVH/ENCSR217RVH_w_bias.bw", "name": "ENCSR217RVH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217RVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217RVH/ENCSR217RVH_wo_bias.bw", "name": "ENCSR217RVH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217RVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right quadriceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217RVH/full_ENCSR217RVH.counts.bigwig", "name": "ENCSR217RVH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217RVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right quadriceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217RVH/full_ENCSR217RVH.profile.bigwig", "name": "ENCSR217RVH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217RVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of right quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of right quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR689FYA/preprocessing/bigWigs/ENCSR689FYA.bigWig", "name": "ENCSR689FYA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR689FYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689FYA/ENCSR689FYA_w_bias.bw", "name": "ENCSR689FYA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR689FYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689FYA/ENCSR689FYA_wo_bias.bw", "name": "ENCSR689FYA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR689FYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689FYA/full_ENCSR689FYA.counts.bigwig", "name": "ENCSR689FYA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR689FYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689FYA/full_ENCSR689FYA.profile.bigwig", "name": "ENCSR689FYA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR689FYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ENQ/preprocessing/bigWigs/ENCSR000ENQ.bigWig", "name": "ENCSR000ENQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ENQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENQ/ENCSR000ENQ_w_bias.bw", "name": "ENCSR000ENQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENQ/ENCSR000ENQ_wo_bias.bw", "name": "ENCSR000ENQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENQ/full_ENCSR000ENQ.counts.bigwig", "name": "ENCSR000ENQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENQ/full_ENCSR000ENQ.profile.bigwig", "name": "ENCSR000ENQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin fibroblast male newborn", "biosample term name": "foreskin fibroblast", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR628IRM/preprocessing/bigWigs/ENCSR628IRM.bigWig", "name": "ENCSR628IRM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR628IRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628IRM/ENCSR628IRM_w_bias.bw", "name": "ENCSR628IRM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628IRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628IRM/ENCSR628IRM_wo_bias.bw", "name": "ENCSR628IRM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628IRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628IRM/full_ENCSR628IRM.counts.bigwig", "name": "ENCSR628IRM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628IRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628IRM/full_ENCSR628IRM.profile.bigwig", "name": "ENCSR628IRM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628IRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR346IHH/preprocessing/bigWigs/ENCSR346IHH.bigWig", "name": "ENCSR346IHH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR346IHH" ], "assay": "DNASE", "biosample summary": "Homo sapiens Daoy", "biosample term name": "Daoy", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346IHH/ENCSR346IHH_w_bias.bw", "name": "ENCSR346IHH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR346IHH" ], "assay": "DNASE", "biosample summary": "Homo sapiens Daoy", "biosample term name": "Daoy", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346IHH/ENCSR346IHH_wo_bias.bw", "name": "ENCSR346IHH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR346IHH" ], "assay": "DNASE", "biosample summary": "Homo sapiens Daoy", "biosample term name": "Daoy", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346IHH/full_ENCSR346IHH.counts.bigwig", "name": "ENCSR346IHH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR346IHH" ], "assay": "DNASE", "biosample summary": "Homo sapiens Daoy", "biosample term name": "Daoy", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346IHH/full_ENCSR346IHH.profile.bigwig", "name": "ENCSR346IHH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR346IHH" ], "assay": "DNASE", "biosample summary": "Homo sapiens Daoy", "biosample term name": "Daoy", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR426IEA/preprocessing/bigWigs/ENCSR426IEA.bigWig", "name": "ENCSR426IEA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR426IEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens KBM-7", "biosample term name": "KBM-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426IEA/ENCSR426IEA_w_bias.bw", "name": "ENCSR426IEA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR426IEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens KBM-7", "biosample term name": "KBM-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426IEA/ENCSR426IEA_wo_bias.bw", "name": "ENCSR426IEA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR426IEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens KBM-7", "biosample term name": "KBM-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426IEA/full_ENCSR426IEA.counts.bigwig", "name": "ENCSR426IEA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR426IEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens KBM-7", "biosample term name": "KBM-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426IEA/full_ENCSR426IEA.profile.bigwig", "name": "ENCSR426IEA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR426IEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens KBM-7", "biosample term name": "KBM-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR567EEO/preprocessing/bigWigs/ENCSR567EEO.bigWig", "name": "ENCSR567EEO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR567EEO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567EEO/ENCSR567EEO_w_bias.bw", "name": "ENCSR567EEO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR567EEO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567EEO/ENCSR567EEO_wo_bias.bw", "name": "ENCSR567EEO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR567EEO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567EEO/full_ENCSR567EEO.counts.bigwig", "name": "ENCSR567EEO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR567EEO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567EEO/full_ENCSR567EEO.profile.bigwig", "name": "ENCSR567EEO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR567EEO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (61 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR917BSW/preprocessing/bigWigs/ENCSR917BSW.bigWig", "name": "ENCSR917BSW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR917BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR917BSW/ENCSR917BSW_w_bias.bw", "name": "ENCSR917BSW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR917BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR917BSW/ENCSR917BSW_wo_bias.bw", "name": "ENCSR917BSW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR917BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR917BSW/full_ENCSR917BSW.counts.bigwig", "name": "ENCSR917BSW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR917BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR917BSW/full_ENCSR917BSW.profile.bigwig", "name": "ENCSR917BSW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR917BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated effector memory CD8-positive, alpha-beta T cell male adult (36 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours", "biosample term name": "stimulated activated effector memory CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR408GYQ/preprocessing/bigWigs/ENCSR408GYQ.bigWig", "name": "ENCSR408GYQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR408GYQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-17A for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR408GYQ/ENCSR408GYQ_w_bias.bw", "name": "ENCSR408GYQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR408GYQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-17A for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR408GYQ/ENCSR408GYQ_wo_bias.bw", "name": "ENCSR408GYQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR408GYQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-17A for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR408GYQ/full_ENCSR408GYQ.counts.bigwig", "name": "ENCSR408GYQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR408GYQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-17A for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR408GYQ/full_ENCSR408GYQ.profile.bigwig", "name": "ENCSR408GYQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR408GYQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-17A for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMZ/preprocessing/bigWigs/ENCSR000EMZ.bigWig", "name": "ENCSR000EMZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H7", "biosample term name": "H7", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMZ/ENCSR000EMZ_w_bias.bw", "name": "ENCSR000EMZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H7", "biosample term name": "H7", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMZ/ENCSR000EMZ_wo_bias.bw", "name": "ENCSR000EMZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H7", "biosample term name": "H7", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMZ/full_ENCSR000EMZ.counts.bigwig", "name": "ENCSR000EMZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H7", "biosample term name": "H7", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMZ/full_ENCSR000EMZ.profile.bigwig", "name": "ENCSR000EMZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H7", "biosample term name": "H7", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR935HEI/preprocessing/bigWigs/ENCSR935HEI.bigWig", "name": "ENCSR935HEI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR935HEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR935HEI/ENCSR935HEI_w_bias.bw", "name": "ENCSR935HEI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR935HEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR935HEI/ENCSR935HEI_wo_bias.bw", "name": "ENCSR935HEI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR935HEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR935HEI/full_ENCSR935HEI.counts.bigwig", "name": "ENCSR935HEI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR935HEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR935HEI/full_ENCSR935HEI.profile.bigwig", "name": "ENCSR935HEI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR935HEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR388NOI/preprocessing/bigWigs/ENCSR388NOI.bigWig", "name": "ENCSR388NOI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR388NOI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-17A for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388NOI/ENCSR388NOI_w_bias.bw", "name": "ENCSR388NOI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR388NOI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-17A for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388NOI/ENCSR388NOI_wo_bias.bw", "name": "ENCSR388NOI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR388NOI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-17A for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388NOI/full_ENCSR388NOI.counts.bigwig", "name": "ENCSR388NOI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR388NOI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-17A for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR388NOI/full_ENCSR388NOI.profile.bigwig", "name": "ENCSR388NOI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR388NOI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-17A for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR776BTO/preprocessing/bigWigs/ENCSR776BTO.bigWig", "name": "ENCSR776BTO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR776BTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR776BTO/ENCSR776BTO_w_bias.bw", "name": "ENCSR776BTO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR776BTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR776BTO/ENCSR776BTO_wo_bias.bw", "name": "ENCSR776BTO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR776BTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR776BTO/full_ENCSR776BTO.counts.bigwig", "name": "ENCSR776BTO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR776BTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR776BTO/full_ENCSR776BTO.profile.bigwig", "name": "ENCSR776BTO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR776BTO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EQD/preprocessing/bigWigs/ENCSR000EQD.bigWig", "name": "ENCSR000EQD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell female adult (26 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQD/ENCSR000EQD_w_bias.bw", "name": "ENCSR000EQD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell female adult (26 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQD/ENCSR000EQD_wo_bias.bw", "name": "ENCSR000EQD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell female adult (26 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQD/full_ENCSR000EQD.counts.bigwig", "name": "ENCSR000EQD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell female adult (26 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQD/full_ENCSR000EQD.profile.bigwig", "name": "ENCSR000EQD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell female adult (26 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR184LMY/preprocessing/bigWigs/ENCSR184LMY.bigWig", "name": "ENCSR184LMY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR184LMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of back male embryo (97 days)", "biosample term name": "fibroblast of skin of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR184LMY/ENCSR184LMY_w_bias.bw", "name": "ENCSR184LMY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR184LMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of back male embryo (97 days)", "biosample term name": "fibroblast of skin of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR184LMY/ENCSR184LMY_wo_bias.bw", "name": "ENCSR184LMY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR184LMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of back male embryo (97 days)", "biosample term name": "fibroblast of skin of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR184LMY/full_ENCSR184LMY.counts.bigwig", "name": "ENCSR184LMY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR184LMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of back male embryo (97 days)", "biosample term name": "fibroblast of skin of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR184LMY/full_ENCSR184LMY.profile.bigwig", "name": "ENCSR184LMY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR184LMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of back male embryo (97 days)", "biosample term name": "fibroblast of skin of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR206OJJ/preprocessing/bigWigs/ENCSR206OJJ.bigWig", "name": "ENCSR206OJJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR206OJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206OJJ/ENCSR206OJJ_w_bias.bw", "name": "ENCSR206OJJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR206OJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206OJJ/ENCSR206OJJ_wo_bias.bw", "name": "ENCSR206OJJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR206OJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206OJJ/full_ENCSR206OJJ.counts.bigwig", "name": "ENCSR206OJJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR206OJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206OJJ/full_ENCSR206OJJ.profile.bigwig", "name": "ENCSR206OJJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR206OJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female adult (47 years)", "biosample term name": "kidney", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR336RGT/preprocessing/bigWigs/ENCSR336RGT.bigWig", "name": "ENCSR336RGT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR336RGT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336RGT/ENCSR336RGT_w_bias.bw", "name": "ENCSR336RGT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR336RGT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336RGT/ENCSR336RGT_wo_bias.bw", "name": "ENCSR336RGT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR336RGT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336RGT/full_ENCSR336RGT.counts.bigwig", "name": "ENCSR336RGT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR336RGT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336RGT/full_ENCSR336RGT.profile.bigwig", "name": "ENCSR336RGT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR336RGT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR276ITP/preprocessing/bigWigs/ENCSR276ITP.bigWig", "name": "ENCSR276ITP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR276ITP" ], "assay": "DNASE", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276ITP/ENCSR276ITP_w_bias.bw", "name": "ENCSR276ITP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR276ITP" ], "assay": "DNASE", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276ITP/ENCSR276ITP_wo_bias.bw", "name": "ENCSR276ITP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR276ITP" ], "assay": "DNASE", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276ITP/full_ENCSR276ITP.counts.bigwig", "name": "ENCSR276ITP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR276ITP" ], "assay": "DNASE", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR276ITP/full_ENCSR276ITP.profile.bigwig", "name": "ENCSR276ITP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR276ITP" ], "assay": "DNASE", "biosample summary": "Homo sapiens sigmoid colon tissue female adult (53 years)", "biosample term name": "sigmoid colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR396EWH/preprocessing/bigWigs/ENCSR396EWH.bigWig", "name": "ENCSR396EWH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR396EWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396EWH/ENCSR396EWH_w_bias.bw", "name": "ENCSR396EWH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR396EWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396EWH/ENCSR396EWH_wo_bias.bw", "name": "ENCSR396EWH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR396EWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396EWH/full_ENCSR396EWH.counts.bigwig", "name": "ENCSR396EWH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR396EWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396EWH/full_ENCSR396EWH.profile.bigwig", "name": "ENCSR396EWH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR396EWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR831QMZ/preprocessing/bigWigs/ENCSR831QMZ.bigWig", "name": "ENCSR831QMZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR831QMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR831QMZ/ENCSR831QMZ_w_bias.bw", "name": "ENCSR831QMZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR831QMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR831QMZ/ENCSR831QMZ_wo_bias.bw", "name": "ENCSR831QMZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR831QMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR831QMZ/full_ENCSR831QMZ.counts.bigwig", "name": "ENCSR831QMZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR831QMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR831QMZ/full_ENCSR831QMZ.profile.bigwig", "name": "ENCSR831QMZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR831QMZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR909HFI/preprocessing/bigWigs/ENCSR909HFI.bigWig", "name": "ENCSR909HFI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR909HFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR909HFI/ENCSR909HFI_w_bias.bw", "name": "ENCSR909HFI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR909HFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR909HFI/ENCSR909HFI_wo_bias.bw", "name": "ENCSR909HFI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR909HFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR909HFI/full_ENCSR909HFI.counts.bigwig", "name": "ENCSR909HFI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR909HFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR909HFI/full_ENCSR909HFI.profile.bigwig", "name": "ENCSR909HFI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR909HFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (53 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR689DSM/preprocessing/bigWigs/ENCSR689DSM.bigWig", "name": "ENCSR689DSM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR689DSM" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689DSM/ENCSR689DSM_w_bias.bw", "name": "ENCSR689DSM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR689DSM" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689DSM/ENCSR689DSM_wo_bias.bw", "name": "ENCSR689DSM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR689DSM" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689DSM/full_ENCSR689DSM.counts.bigwig", "name": "ENCSR689DSM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR689DSM" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR689DSM/full_ENCSR689DSM.profile.bigwig", "name": "ENCSR689DSM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR689DSM" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue female adult (53 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR865CYW/preprocessing/bigWigs/ENCSR865CYW.bigWig", "name": "ENCSR865CYW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR865CYW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR865CYW/ENCSR865CYW_w_bias.bw", "name": "ENCSR865CYW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR865CYW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR865CYW/ENCSR865CYW_wo_bias.bw", "name": "ENCSR865CYW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR865CYW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR865CYW/full_ENCSR865CYW.counts.bigwig", "name": "ENCSR865CYW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR865CYW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR865CYW/full_ENCSR865CYW.profile.bigwig", "name": "ENCSR865CYW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR865CYW" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR324NVG/preprocessing/bigWigs/ENCSR324NVG.bigWig", "name": "ENCSR324NVG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR324NVG" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324NVG/ENCSR324NVG_w_bias.bw", "name": "ENCSR324NVG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR324NVG" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324NVG/ENCSR324NVG_wo_bias.bw", "name": "ENCSR324NVG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR324NVG" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324NVG/full_ENCSR324NVG.counts.bigwig", "name": "ENCSR324NVG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR324NVG" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324NVG/full_ENCSR324NVG.profile.bigwig", "name": "ENCSR324NVG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR324NVG" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior vena cava tissue female adult (47 years)", "biosample term name": "posterior vena cava", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR515EWI/preprocessing/bigWigs/ENCSR515EWI.bigWig", "name": "ENCSR515EWI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR515EWI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caki2", "biosample term name": "Caki2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515EWI/ENCSR515EWI_w_bias.bw", "name": "ENCSR515EWI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515EWI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caki2", "biosample term name": "Caki2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515EWI/ENCSR515EWI_wo_bias.bw", "name": "ENCSR515EWI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515EWI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caki2", "biosample term name": "Caki2", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515EWI/full_ENCSR515EWI.counts.bigwig", "name": "ENCSR515EWI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515EWI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caki2", "biosample term name": "Caki2", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515EWI/full_ENCSR515EWI.profile.bigwig", "name": "ENCSR515EWI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515EWI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caki2", "biosample term name": "Caki2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR405YLV/preprocessing/bigWigs/ENCSR405YLV.bigWig", "name": "ENCSR405YLV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR405YLV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR405YLV/ENCSR405YLV_w_bias.bw", "name": "ENCSR405YLV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR405YLV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR405YLV/ENCSR405YLV_wo_bias.bw", "name": "ENCSR405YLV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR405YLV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR405YLV/full_ENCSR405YLV.counts.bigwig", "name": "ENCSR405YLV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR405YLV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR405YLV/full_ENCSR405YLV.profile.bigwig", "name": "ENCSR405YLV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR405YLV" ], "assay": "DNASE", "biosample summary": "Homo sapiens body of pancreas tissue female adult (51 years)", "biosample term name": "body of pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR770DEN/preprocessing/bigWigs/ENCSR770DEN.bigWig", "name": "ENCSR770DEN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR770DEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770DEN/ENCSR770DEN_w_bias.bw", "name": "ENCSR770DEN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR770DEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770DEN/ENCSR770DEN_wo_bias.bw", "name": "ENCSR770DEN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR770DEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770DEN/full_ENCSR770DEN.counts.bigwig", "name": "ENCSR770DEN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR770DEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770DEN/full_ENCSR770DEN.profile.bigwig", "name": "ENCSR770DEN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR770DEN" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR141RSN/preprocessing/bigWigs/ENCSR141RSN.bigWig", "name": "ENCSR141RSN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR141RSN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141RSN/ENCSR141RSN_w_bias.bw", "name": "ENCSR141RSN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141RSN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141RSN/ENCSR141RSN_wo_bias.bw", "name": "ENCSR141RSN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141RSN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141RSN/full_ENCSR141RSN.counts.bigwig", "name": "ENCSR141RSN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141RSN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141RSN/full_ENCSR141RSN.profile.bigwig", "name": "ENCSR141RSN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141RSN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR141IUS/preprocessing/bigWigs/ENCSR141IUS.bigWig", "name": "ENCSR141IUS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR141IUS" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female embryo (76 days)", "biosample term name": "lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141IUS/ENCSR141IUS_w_bias.bw", "name": "ENCSR141IUS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141IUS" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female embryo (76 days)", "biosample term name": "lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141IUS/ENCSR141IUS_wo_bias.bw", "name": "ENCSR141IUS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR141IUS" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female embryo (76 days)", "biosample term name": "lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141IUS/full_ENCSR141IUS.counts.bigwig", "name": "ENCSR141IUS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141IUS" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female embryo (76 days)", "biosample term name": "lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR141IUS/full_ENCSR141IUS.profile.bigwig", "name": "ENCSR141IUS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR141IUS" ], "assay": "DNASE", "biosample summary": "Homo sapiens lung tissue female embryo (76 days)", "biosample term name": "lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR014GTH/preprocessing/bigWigs/ENCSR014GTH.bigWig", "name": "ENCSR014GTH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR014GTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014GTH/ENCSR014GTH_w_bias.bw", "name": "ENCSR014GTH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR014GTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014GTH/ENCSR014GTH_wo_bias.bw", "name": "ENCSR014GTH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR014GTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014GTH/full_ENCSR014GTH.counts.bigwig", "name": "ENCSR014GTH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR014GTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014GTH/full_ENCSR014GTH.profile.bigwig", "name": "ENCSR014GTH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR014GTH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR010SZN/preprocessing/bigWigs/ENCSR010SZN.bigWig", "name": "ENCSR010SZN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR010SZN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010SZN/ENCSR010SZN_w_bias.bw", "name": "ENCSR010SZN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR010SZN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010SZN/ENCSR010SZN_wo_bias.bw", "name": "ENCSR010SZN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR010SZN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010SZN/full_ENCSR010SZN.counts.bigwig", "name": "ENCSR010SZN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR010SZN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010SZN/full_ENCSR010SZN.profile.bigwig", "name": "ENCSR010SZN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR010SZN" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR932KWJ/preprocessing/bigWigs/ENCSR932KWJ.bigWig", "name": "ENCSR932KWJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR932KWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens A172", "biosample term name": "A172", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932KWJ/ENCSR932KWJ_w_bias.bw", "name": "ENCSR932KWJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR932KWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens A172", "biosample term name": "A172", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932KWJ/ENCSR932KWJ_wo_bias.bw", "name": "ENCSR932KWJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR932KWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens A172", "biosample term name": "A172", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932KWJ/full_ENCSR932KWJ.counts.bigwig", "name": "ENCSR932KWJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR932KWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens A172", "biosample term name": "A172", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR932KWJ/full_ENCSR932KWJ.profile.bigwig", "name": "ENCSR932KWJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR932KWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens A172", "biosample term name": "A172", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR098ISE/preprocessing/bigWigs/ENCSR098ISE.bigWig", "name": "ENCSR098ISE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR098ISE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR098ISE/ENCSR098ISE_w_bias.bw", "name": "ENCSR098ISE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR098ISE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR098ISE/ENCSR098ISE_wo_bias.bw", "name": "ENCSR098ISE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR098ISE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR098ISE/full_ENCSR098ISE.counts.bigwig", "name": "ENCSR098ISE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR098ISE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR098ISE/full_ENCSR098ISE.profile.bigwig", "name": "ENCSR098ISE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR098ISE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR805XIF/preprocessing/bigWigs/ENCSR805XIF.bigWig", "name": "ENCSR805XIF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR805XIF" ], "assay": "DNASE", "biosample summary": "Homo sapiens femur tissue female embryo (98 days)", "biosample term name": "femur", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805XIF/ENCSR805XIF_w_bias.bw", "name": "ENCSR805XIF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR805XIF" ], "assay": "DNASE", "biosample summary": "Homo sapiens femur tissue female embryo (98 days)", "biosample term name": "femur", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805XIF/ENCSR805XIF_wo_bias.bw", "name": "ENCSR805XIF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR805XIF" ], "assay": "DNASE", "biosample summary": "Homo sapiens femur tissue female embryo (98 days)", "biosample term name": "femur", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805XIF/full_ENCSR805XIF.counts.bigwig", "name": "ENCSR805XIF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR805XIF" ], "assay": "DNASE", "biosample summary": "Homo sapiens femur tissue female embryo (98 days)", "biosample term name": "femur", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR805XIF/full_ENCSR805XIF.profile.bigwig", "name": "ENCSR805XIF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR805XIF" ], "assay": "DNASE", "biosample summary": "Homo sapiens femur tissue female embryo (98 days)", "biosample term name": "femur", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR021YFW/preprocessing/bigWigs/ENCSR021YFW.bigWig", "name": "ENCSR021YFW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR021YFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR021YFW/ENCSR021YFW_w_bias.bw", "name": "ENCSR021YFW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR021YFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR021YFW/ENCSR021YFW_wo_bias.bw", "name": "ENCSR021YFW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR021YFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR021YFW/full_ENCSR021YFW.counts.bigwig", "name": "ENCSR021YFW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR021YFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR021YFW/full_ENCSR021YFW.profile.bigwig", "name": "ENCSR021YFW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR021YFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR458LIB/preprocessing/bigWigs/ENCSR458LIB.bigWig", "name": "ENCSR458LIB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR458LIB" ], "assay": "DNASE", "biosample summary": "Homo sapiens MM.1S", "biosample term name": "MM.1S", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR458LIB/ENCSR458LIB_w_bias.bw", "name": "ENCSR458LIB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR458LIB" ], "assay": "DNASE", "biosample summary": "Homo sapiens MM.1S", "biosample term name": "MM.1S", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR458LIB/ENCSR458LIB_wo_bias.bw", "name": "ENCSR458LIB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR458LIB" ], "assay": "DNASE", "biosample summary": "Homo sapiens MM.1S", "biosample term name": "MM.1S", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR458LIB/full_ENCSR458LIB.counts.bigwig", "name": "ENCSR458LIB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR458LIB" ], "assay": "DNASE", "biosample summary": "Homo sapiens MM.1S", "biosample term name": "MM.1S", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR458LIB/full_ENCSR458LIB.profile.bigwig", "name": "ENCSR458LIB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR458LIB" ], "assay": "DNASE", "biosample summary": "Homo sapiens MM.1S", "biosample term name": "MM.1S", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR576UAF/preprocessing/bigWigs/ENCSR576UAF.bigWig", "name": "ENCSR576UAF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR576UAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female child (16 years)", "biosample term name": "colonic mucosa", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR576UAF/ENCSR576UAF_w_bias.bw", "name": "ENCSR576UAF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR576UAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female child (16 years)", "biosample term name": "colonic mucosa", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR576UAF/ENCSR576UAF_wo_bias.bw", "name": "ENCSR576UAF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR576UAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female child (16 years)", "biosample term name": "colonic mucosa", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR576UAF/full_ENCSR576UAF.counts.bigwig", "name": "ENCSR576UAF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR576UAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female child (16 years)", "biosample term name": "colonic mucosa", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR576UAF/full_ENCSR576UAF.profile.bigwig", "name": "ENCSR576UAF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR576UAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens colonic mucosa tissue female child (16 years)", "biosample term name": "colonic mucosa", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR363LUK/preprocessing/bigWigs/ENCSR363LUK.bigWig", "name": "ENCSR363LUK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR363LUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-15 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363LUK/ENCSR363LUK_w_bias.bw", "name": "ENCSR363LUK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR363LUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-15 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363LUK/ENCSR363LUK_wo_bias.bw", "name": "ENCSR363LUK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR363LUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-15 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363LUK/full_ENCSR363LUK.counts.bigwig", "name": "ENCSR363LUK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR363LUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-15 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363LUK/full_ENCSR363LUK.profile.bigwig", "name": "ENCSR363LUK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR363LUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interleukin-15 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR883WDW/preprocessing/bigWigs/ENCSR883WDW.bigWig", "name": "ENCSR883WDW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR883WDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-6 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR883WDW/ENCSR883WDW_w_bias.bw", "name": "ENCSR883WDW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR883WDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-6 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR883WDW/ENCSR883WDW_wo_bias.bw", "name": "ENCSR883WDW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR883WDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-6 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR883WDW/full_ENCSR883WDW.counts.bigwig", "name": "ENCSR883WDW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR883WDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-6 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR883WDW/full_ENCSR883WDW.profile.bigwig", "name": "ENCSR883WDW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR883WDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with Interleukin-6 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR002IHL/preprocessing/bigWigs/ENCSR002IHL.bigWig", "name": "ENCSR002IHL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR002IHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR002IHL/ENCSR002IHL_w_bias.bw", "name": "ENCSR002IHL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR002IHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR002IHL/ENCSR002IHL_wo_bias.bw", "name": "ENCSR002IHL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR002IHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR002IHL/full_ENCSR002IHL.counts.bigwig", "name": "ENCSR002IHL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR002IHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR002IHL/full_ENCSR002IHL.profile.bigwig", "name": "ENCSR002IHL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR002IHL" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMJ/preprocessing/bigWigs/ENCSR000EMJ.bigWig", "name": "ENCSR000EMJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell female adult (43 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMJ/ENCSR000EMJ_w_bias.bw", "name": "ENCSR000EMJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell female adult (43 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMJ/ENCSR000EMJ_wo_bias.bw", "name": "ENCSR000EMJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell female adult (43 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMJ/full_ENCSR000EMJ.counts.bigwig", "name": "ENCSR000EMJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell female adult (43 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMJ/full_ENCSR000EMJ.profile.bigwig", "name": "ENCSR000EMJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell female adult (43 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR374VQC/preprocessing/bigWigs/ENCSR374VQC.bigWig", "name": "ENCSR374VQC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR374VQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR374VQC/ENCSR374VQC_w_bias.bw", "name": "ENCSR374VQC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR374VQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR374VQC/ENCSR374VQC_wo_bias.bw", "name": "ENCSR374VQC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR374VQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR374VQC/full_ENCSR374VQC.counts.bigwig", "name": "ENCSR374VQC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR374VQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR374VQC/full_ENCSR374VQC.profile.bigwig", "name": "ENCSR374VQC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR374VQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right cardiac atrium tissue female adult (46 years)", "biosample term name": "right cardiac atrium", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR149XIL/preprocessing/bigWigs/ENCSR149XIL.bigWig", "name": "ENCSR149XIL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR149XIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR149XIL/ENCSR149XIL_w_bias.bw", "name": "ENCSR149XIL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR149XIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR149XIL/ENCSR149XIL_wo_bias.bw", "name": "ENCSR149XIL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR149XIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR149XIL/full_ENCSR149XIL.counts.bigwig", "name": "ENCSR149XIL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR149XIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR149XIL/full_ENCSR149XIL.profile.bigwig", "name": "ENCSR149XIL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR149XIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens HepG2", "biosample term name": "HepG2", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR449HOQ/preprocessing/bigWigs/ENCSR449HOQ.bigWig", "name": "ENCSR449HOQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR449HOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right hindlimb tissue male embryo (81 days)", "biosample term name": "right hindlimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR449HOQ/ENCSR449HOQ_w_bias.bw", "name": "ENCSR449HOQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR449HOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right hindlimb tissue male embryo (81 days)", "biosample term name": "right hindlimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR449HOQ/ENCSR449HOQ_wo_bias.bw", "name": "ENCSR449HOQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR449HOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right hindlimb tissue male embryo (81 days)", "biosample term name": "right hindlimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR449HOQ/full_ENCSR449HOQ.counts.bigwig", "name": "ENCSR449HOQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR449HOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right hindlimb tissue male embryo (81 days)", "biosample term name": "right hindlimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR449HOQ/full_ENCSR449HOQ.profile.bigwig", "name": "ENCSR449HOQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR449HOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right hindlimb tissue male embryo (81 days)", "biosample term name": "right hindlimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR628NEA/preprocessing/bigWigs/ENCSR628NEA.bigWig", "name": "ENCSR628NEA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR628NEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628NEA/ENCSR628NEA_w_bias.bw", "name": "ENCSR628NEA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628NEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628NEA/ENCSR628NEA_wo_bias.bw", "name": "ENCSR628NEA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628NEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628NEA/full_ENCSR628NEA.counts.bigwig", "name": "ENCSR628NEA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628NEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628NEA/full_ENCSR628NEA.profile.bigwig", "name": "ENCSR628NEA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628NEA" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue male adult (45 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR357AWH/preprocessing/bigWigs/ENCSR357AWH.bigWig", "name": "ENCSR357AWH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR357AWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of right lung tissue male adult (60 years)", "biosample term name": "upper lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357AWH/ENCSR357AWH_w_bias.bw", "name": "ENCSR357AWH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR357AWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of right lung tissue male adult (60 years)", "biosample term name": "upper lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357AWH/ENCSR357AWH_wo_bias.bw", "name": "ENCSR357AWH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR357AWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of right lung tissue male adult (60 years)", "biosample term name": "upper lobe of right lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357AWH/full_ENCSR357AWH.counts.bigwig", "name": "ENCSR357AWH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR357AWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of right lung tissue male adult (60 years)", "biosample term name": "upper lobe of right lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357AWH/full_ENCSR357AWH.profile.bigwig", "name": "ENCSR357AWH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR357AWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of right lung tissue male adult (60 years)", "biosample term name": "upper lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR306LNA/preprocessing/bigWigs/ENCSR306LNA.bigWig", "name": "ENCSR306LNA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR306LNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease, Cognitive impairment; middle frontal area 46 tissue male adult (73 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306LNA/ENCSR306LNA_w_bias.bw", "name": "ENCSR306LNA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR306LNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease, Cognitive impairment; middle frontal area 46 tissue male adult (73 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306LNA/ENCSR306LNA_wo_bias.bw", "name": "ENCSR306LNA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR306LNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease, Cognitive impairment; middle frontal area 46 tissue male adult (73 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306LNA/full_ENCSR306LNA.counts.bigwig", "name": "ENCSR306LNA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR306LNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease, Cognitive impairment; middle frontal area 46 tissue male adult (73 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR306LNA/full_ENCSR306LNA.profile.bigwig", "name": "ENCSR306LNA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR306LNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease, Cognitive impairment; middle frontal area 46 tissue male adult (73 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR612CTW/preprocessing/bigWigs/ENCSR612CTW.bigWig", "name": "ENCSR612CTW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR612CTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (40 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612CTW/ENCSR612CTW_w_bias.bw", "name": "ENCSR612CTW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR612CTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (40 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612CTW/ENCSR612CTW_wo_bias.bw", "name": "ENCSR612CTW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR612CTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (40 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612CTW/full_ENCSR612CTW.counts.bigwig", "name": "ENCSR612CTW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR612CTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (40 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612CTW/full_ENCSR612CTW.profile.bigwig", "name": "ENCSR612CTW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR612CTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (40 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR053ZKP/preprocessing/bigWigs/ENCSR053ZKP.bigWig", "name": "ENCSR053ZKP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR053ZKP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (53 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR053ZKP/ENCSR053ZKP_w_bias.bw", "name": "ENCSR053ZKP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR053ZKP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (53 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR053ZKP/ENCSR053ZKP_wo_bias.bw", "name": "ENCSR053ZKP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR053ZKP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (53 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR053ZKP/full_ENCSR053ZKP.counts.bigwig", "name": "ENCSR053ZKP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR053ZKP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (53 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR053ZKP/full_ENCSR053ZKP.profile.bigwig", "name": "ENCSR053ZKP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR053ZKP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (53 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR108SYM/preprocessing/bigWigs/ENCSR108SYM.bigWig", "name": "ENCSR108SYM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR108SYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (61 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108SYM/ENCSR108SYM_w_bias.bw", "name": "ENCSR108SYM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR108SYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (61 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108SYM/ENCSR108SYM_wo_bias.bw", "name": "ENCSR108SYM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR108SYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (61 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108SYM/full_ENCSR108SYM.counts.bigwig", "name": "ENCSR108SYM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR108SYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (61 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108SYM/full_ENCSR108SYM.profile.bigwig", "name": "ENCSR108SYM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR108SYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female adult (61 years)", "biosample term name": "psoas muscle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR849CYU/preprocessing/bigWigs/ENCSR849CYU.bigWig", "name": "ENCSR849CYU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR849CYU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849CYU/ENCSR849CYU_w_bias.bw", "name": "ENCSR849CYU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR849CYU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849CYU/ENCSR849CYU_wo_bias.bw", "name": "ENCSR849CYU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR849CYU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849CYU/full_ENCSR849CYU.counts.bigwig", "name": "ENCSR849CYU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR849CYU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849CYU/full_ENCSR849CYU.profile.bigwig", "name": "ENCSR849CYU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR849CYU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR433NEX/preprocessing/bigWigs/ENCSR433NEX.bigWig", "name": "ENCSR433NEX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR433NEX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR433NEX/ENCSR433NEX_w_bias.bw", "name": "ENCSR433NEX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR433NEX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR433NEX/ENCSR433NEX_wo_bias.bw", "name": "ENCSR433NEX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR433NEX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR433NEX/full_ENCSR433NEX.counts.bigwig", "name": "ENCSR433NEX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR433NEX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR433NEX/full_ENCSR433NEX.profile.bigwig", "name": "ENCSR433NEX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR433NEX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR798XLO/preprocessing/bigWigs/ENCSR798XLO.bigWig", "name": "ENCSR798XLO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR798XLO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR798XLO/ENCSR798XLO_w_bias.bw", "name": "ENCSR798XLO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR798XLO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR798XLO/ENCSR798XLO_wo_bias.bw", "name": "ENCSR798XLO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR798XLO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR798XLO/full_ENCSR798XLO.counts.bigwig", "name": "ENCSR798XLO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR798XLO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR798XLO/full_ENCSR798XLO.profile.bigwig", "name": "ENCSR798XLO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR798XLO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (46 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR880CUB/preprocessing/bigWigs/ENCSR880CUB.bigWig", "name": "ENCSR880CUB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR880CUB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR880CUB/ENCSR880CUB_w_bias.bw", "name": "ENCSR880CUB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR880CUB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR880CUB/ENCSR880CUB_wo_bias.bw", "name": "ENCSR880CUB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR880CUB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR880CUB/full_ENCSR880CUB.counts.bigwig", "name": "ENCSR880CUB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR880CUB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR880CUB/full_ENCSR880CUB.profile.bigwig", "name": "ENCSR880CUB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR880CUB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR705GCU/preprocessing/bigWigs/ENCSR705GCU.bigWig", "name": "ENCSR705GCU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR705GCU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR705GCU/ENCSR705GCU_w_bias.bw", "name": "ENCSR705GCU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR705GCU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR705GCU/ENCSR705GCU_wo_bias.bw", "name": "ENCSR705GCU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR705GCU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR705GCU/full_ENCSR705GCU.counts.bigwig", "name": "ENCSR705GCU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR705GCU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR705GCU/full_ENCSR705GCU.profile.bigwig", "name": "ENCSR705GCU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR705GCU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR355WAJ/preprocessing/bigWigs/ENCSR355WAJ.bigWig", "name": "ENCSR355WAJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR355WAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR355WAJ/ENCSR355WAJ_w_bias.bw", "name": "ENCSR355WAJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR355WAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR355WAJ/ENCSR355WAJ_wo_bias.bw", "name": "ENCSR355WAJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR355WAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR355WAJ/full_ENCSR355WAJ.counts.bigwig", "name": "ENCSR355WAJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR355WAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR355WAJ/full_ENCSR355WAJ.profile.bigwig", "name": "ENCSR355WAJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR355WAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "left ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR163BSC/preprocessing/bigWigs/ENCSR163BSC.bigWig", "name": "ENCSR163BSC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR163BSC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163BSC/ENCSR163BSC_w_bias.bw", "name": "ENCSR163BSC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR163BSC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163BSC/ENCSR163BSC_wo_bias.bw", "name": "ENCSR163BSC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR163BSC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163BSC/full_ENCSR163BSC.counts.bigwig", "name": "ENCSR163BSC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR163BSC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163BSC/full_ENCSR163BSC.profile.bigwig", "name": "ENCSR163BSC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR163BSC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR567IWT/preprocessing/bigWigs/ENCSR567IWT.bigWig", "name": "ENCSR567IWT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR567IWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567IWT/ENCSR567IWT_w_bias.bw", "name": "ENCSR567IWT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR567IWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567IWT/ENCSR567IWT_wo_bias.bw", "name": "ENCSR567IWT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR567IWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567IWT/full_ENCSR567IWT.counts.bigwig", "name": "ENCSR567IWT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR567IWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR567IWT/full_ENCSR567IWT.profile.bigwig", "name": "ENCSR567IWT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR567IWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR789VGQ/preprocessing/bigWigs/ENCSR789VGQ.bigWig", "name": "ENCSR789VGQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR789VGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789VGQ/ENCSR789VGQ_w_bias.bw", "name": "ENCSR789VGQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR789VGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789VGQ/ENCSR789VGQ_wo_bias.bw", "name": "ENCSR789VGQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR789VGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789VGQ/full_ENCSR789VGQ.counts.bigwig", "name": "ENCSR789VGQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR789VGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR789VGQ/full_ENCSR789VGQ.profile.bigwig", "name": "ENCSR789VGQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR789VGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF 10A", "biosample term name": "MCF 10A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR252NVI/preprocessing/bigWigs/ENCSR252NVI.bigWig", "name": "ENCSR252NVI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR252NVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-10 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR252NVI/ENCSR252NVI_w_bias.bw", "name": "ENCSR252NVI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR252NVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-10 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR252NVI/ENCSR252NVI_wo_bias.bw", "name": "ENCSR252NVI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR252NVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-10 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR252NVI/full_ENCSR252NVI.counts.bigwig", "name": "ENCSR252NVI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR252NVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-10 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR252NVI/full_ENCSR252NVI.profile.bigwig", "name": "ENCSR252NVI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR252NVI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-10 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR802ZYE/preprocessing/bigWigs/ENCSR802ZYE.bigWig", "name": "ENCSR802ZYE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR802ZYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lobe of liver tissue male adult (45 years)", "biosample term name": "left lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802ZYE/ENCSR802ZYE_w_bias.bw", "name": "ENCSR802ZYE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802ZYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lobe of liver tissue male adult (45 years)", "biosample term name": "left lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802ZYE/ENCSR802ZYE_wo_bias.bw", "name": "ENCSR802ZYE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802ZYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lobe of liver tissue male adult (45 years)", "biosample term name": "left lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802ZYE/full_ENCSR802ZYE.counts.bigwig", "name": "ENCSR802ZYE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802ZYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lobe of liver tissue male adult (45 years)", "biosample term name": "left lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802ZYE/full_ENCSR802ZYE.profile.bigwig", "name": "ENCSR802ZYE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802ZYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lobe of liver tissue male adult (45 years)", "biosample term name": "left lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR735NTV/preprocessing/bigWigs/ENCSR735NTV.bigWig", "name": "ENCSR735NTV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR735NTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735NTV/ENCSR735NTV_w_bias.bw", "name": "ENCSR735NTV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR735NTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735NTV/ENCSR735NTV_wo_bias.bw", "name": "ENCSR735NTV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR735NTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735NTV/full_ENCSR735NTV.counts.bigwig", "name": "ENCSR735NTV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR735NTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735NTV/full_ENCSR735NTV.profile.bigwig", "name": "ENCSR735NTV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR735NTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (54 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR126EVK/preprocessing/bigWigs/ENCSR126EVK.bigWig", "name": "ENCSR126EVK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR126EVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVK/ENCSR126EVK_w_bias.bw", "name": "ENCSR126EVK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR126EVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVK/ENCSR126EVK_wo_bias.bw", "name": "ENCSR126EVK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR126EVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVK/full_ENCSR126EVK.counts.bigwig", "name": "ENCSR126EVK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR126EVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVK/full_ENCSR126EVK.profile.bigwig", "name": "ENCSR126EVK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR126EVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR436JRE/preprocessing/bigWigs/ENCSR436JRE.bigWig", "name": "ENCSR436JRE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR436JRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR436JRE/ENCSR436JRE_w_bias.bw", "name": "ENCSR436JRE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR436JRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR436JRE/ENCSR436JRE_wo_bias.bw", "name": "ENCSR436JRE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR436JRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR436JRE/full_ENCSR436JRE.counts.bigwig", "name": "ENCSR436JRE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR436JRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR436JRE/full_ENCSR436JRE.profile.bigwig", "name": "ENCSR436JRE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR436JRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR101HFF/preprocessing/bigWigs/ENCSR101HFF.bigWig", "name": "ENCSR101HFF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR101HFF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR101HFF/ENCSR101HFF_w_bias.bw", "name": "ENCSR101HFF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR101HFF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR101HFF/ENCSR101HFF_wo_bias.bw", "name": "ENCSR101HFF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR101HFF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR101HFF/full_ENCSR101HFF.counts.bigwig", "name": "ENCSR101HFF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR101HFF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR101HFF/full_ENCSR101HFF.profile.bigwig", "name": "ENCSR101HFF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR101HFF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (81 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR946OIO/preprocessing/bigWigs/ENCSR946OIO.bigWig", "name": "ENCSR946OIO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR946OIO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (59 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946OIO/ENCSR946OIO_w_bias.bw", "name": "ENCSR946OIO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR946OIO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (59 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946OIO/ENCSR946OIO_wo_bias.bw", "name": "ENCSR946OIO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR946OIO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (59 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946OIO/full_ENCSR946OIO.counts.bigwig", "name": "ENCSR946OIO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR946OIO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (59 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946OIO/full_ENCSR946OIO.profile.bigwig", "name": "ENCSR946OIO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR946OIO" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (59 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR323LVJ/preprocessing/bigWigs/ENCSR323LVJ.bigWig", "name": "ENCSR323LVJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR323LVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323LVJ/ENCSR323LVJ_w_bias.bw", "name": "ENCSR323LVJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR323LVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323LVJ/ENCSR323LVJ_wo_bias.bw", "name": "ENCSR323LVJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR323LVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323LVJ/full_ENCSR323LVJ.counts.bigwig", "name": "ENCSR323LVJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR323LVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323LVJ/full_ENCSR323LVJ.profile.bigwig", "name": "ENCSR323LVJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR323LVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR800ADR/preprocessing/bigWigs/ENCSR800ADR.bigWig", "name": "ENCSR800ADR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR800ADR" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800ADR/ENCSR800ADR_w_bias.bw", "name": "ENCSR800ADR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR800ADR" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800ADR/ENCSR800ADR_wo_bias.bw", "name": "ENCSR800ADR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR800ADR" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800ADR/full_ENCSR800ADR.counts.bigwig", "name": "ENCSR800ADR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR800ADR" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800ADR/full_ENCSR800ADR.profile.bigwig", "name": "ENCSR800ADR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR800ADR" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (61 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR653ISV/preprocessing/bigWigs/ENCSR653ISV.bigWig", "name": "ENCSR653ISV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR653ISV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR653ISV/ENCSR653ISV_w_bias.bw", "name": "ENCSR653ISV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR653ISV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR653ISV/ENCSR653ISV_wo_bias.bw", "name": "ENCSR653ISV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR653ISV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR653ISV/full_ENCSR653ISV.counts.bigwig", "name": "ENCSR653ISV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR653ISV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR653ISV/full_ENCSR653ISV.profile.bigwig", "name": "ENCSR653ISV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR653ISV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR424MWH/preprocessing/bigWigs/ENCSR424MWH.bigWig", "name": "ENCSR424MWH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR424MWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-21 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR424MWH/ENCSR424MWH_w_bias.bw", "name": "ENCSR424MWH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR424MWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-21 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR424MWH/ENCSR424MWH_wo_bias.bw", "name": "ENCSR424MWH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR424MWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-21 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR424MWH/full_ENCSR424MWH.counts.bigwig", "name": "ENCSR424MWH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR424MWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-21 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR424MWH/full_ENCSR424MWH.profile.bigwig", "name": "ENCSR424MWH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR424MWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-21 for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR154NYM/preprocessing/bigWigs/ENCSR154NYM.bigWig", "name": "ENCSR154NYM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR154NYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NYM/ENCSR154NYM_w_bias.bw", "name": "ENCSR154NYM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR154NYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NYM/ENCSR154NYM_wo_bias.bw", "name": "ENCSR154NYM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR154NYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NYM/full_ENCSR154NYM.counts.bigwig", "name": "ENCSR154NYM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR154NYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NYM/full_ENCSR154NYM.profile.bigwig", "name": "ENCSR154NYM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR154NYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (36 years) treated with anti-CD3 and anti-CD28 coated beads for 72 hours, 100 ng/mL Interleukin-15 for 72 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR552RKI/preprocessing/bigWigs/ENCSR552RKI.bigWig", "name": "ENCSR552RKI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR552RKI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (102 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552RKI/ENCSR552RKI_w_bias.bw", "name": "ENCSR552RKI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552RKI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (102 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552RKI/ENCSR552RKI_wo_bias.bw", "name": "ENCSR552RKI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552RKI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (102 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552RKI/full_ENCSR552RKI.counts.bigwig", "name": "ENCSR552RKI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552RKI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (102 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552RKI/full_ENCSR552RKI.profile.bigwig", "name": "ENCSR552RKI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552RKI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (102 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR552XJI/preprocessing/bigWigs/ENCSR552XJI.bigWig", "name": "ENCSR552XJI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR552XJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (56 days) and embryo (59 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552XJI/ENCSR552XJI_w_bias.bw", "name": "ENCSR552XJI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552XJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (56 days) and embryo (59 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552XJI/ENCSR552XJI_wo_bias.bw", "name": "ENCSR552XJI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552XJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (56 days) and embryo (59 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552XJI/full_ENCSR552XJI.counts.bigwig", "name": "ENCSR552XJI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552XJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (56 days) and embryo (59 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552XJI/full_ENCSR552XJI.profile.bigwig", "name": "ENCSR552XJI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552XJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue embryo (56 days) and embryo (59 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EQF/preprocessing/bigWigs/ENCSR000EQF.bigWig", "name": "ENCSR000EQF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EQF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell", "biosample term name": "T-helper 17 cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQF/ENCSR000EQF_w_bias.bw", "name": "ENCSR000EQF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell", "biosample term name": "T-helper 17 cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQF/ENCSR000EQF_wo_bias.bw", "name": "ENCSR000EQF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell", "biosample term name": "T-helper 17 cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQF/full_ENCSR000EQF.counts.bigwig", "name": "ENCSR000EQF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell", "biosample term name": "T-helper 17 cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQF/full_ENCSR000EQF.profile.bigwig", "name": "ENCSR000EQF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell", "biosample term name": "T-helper 17 cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR274SDO/preprocessing/bigWigs/ENCSR274SDO.bigWig", "name": "ENCSR274SDO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR274SDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens right forelimb tissue male embryo (81 days)", "biosample term name": "right forelimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274SDO/ENCSR274SDO_w_bias.bw", "name": "ENCSR274SDO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR274SDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens right forelimb tissue male embryo (81 days)", "biosample term name": "right forelimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274SDO/ENCSR274SDO_wo_bias.bw", "name": "ENCSR274SDO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR274SDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens right forelimb tissue male embryo (81 days)", "biosample term name": "right forelimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274SDO/full_ENCSR274SDO.counts.bigwig", "name": "ENCSR274SDO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR274SDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens right forelimb tissue male embryo (81 days)", "biosample term name": "right forelimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274SDO/full_ENCSR274SDO.profile.bigwig", "name": "ENCSR274SDO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR274SDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens right forelimb tissue male embryo (81 days)", "biosample term name": "right forelimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR242RPQ/preprocessing/bigWigs/ENCSR242RPQ.bigWig", "name": "ENCSR242RPQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR242RPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242RPQ/ENCSR242RPQ_w_bias.bw", "name": "ENCSR242RPQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR242RPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242RPQ/ENCSR242RPQ_wo_bias.bw", "name": "ENCSR242RPQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR242RPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242RPQ/full_ENCSR242RPQ.counts.bigwig", "name": "ENCSR242RPQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR242RPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242RPQ/full_ENCSR242RPQ.profile.bigwig", "name": "ENCSR242RPQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR242RPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female child (16 years)", "biosample term name": "pancreas", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR478SWA/preprocessing/bigWigs/ENCSR478SWA.bigWig", "name": "ENCSR478SWA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR478SWA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR478SWA/ENCSR478SWA_w_bias.bw", "name": "ENCSR478SWA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR478SWA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR478SWA/ENCSR478SWA_wo_bias.bw", "name": "ENCSR478SWA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR478SWA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR478SWA/full_ENCSR478SWA.counts.bigwig", "name": "ENCSR478SWA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR478SWA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR478SWA/full_ENCSR478SWA.profile.bigwig", "name": "ENCSR478SWA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR478SWA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR632ONQ/preprocessing/bigWigs/ENCSR632ONQ.bigWig", "name": "ENCSR632ONQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR632ONQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue female adult (59 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR632ONQ/ENCSR632ONQ_w_bias.bw", "name": "ENCSR632ONQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR632ONQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue female adult (59 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR632ONQ/ENCSR632ONQ_wo_bias.bw", "name": "ENCSR632ONQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR632ONQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue female adult (59 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR632ONQ/full_ENCSR632ONQ.counts.bigwig", "name": "ENCSR632ONQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR632ONQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue female adult (59 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR632ONQ/full_ENCSR632ONQ.profile.bigwig", "name": "ENCSR632ONQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR632ONQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of left lung tissue female adult (59 years)", "biosample term name": "lower lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR962VJO/preprocessing/bigWigs/ENCSR962VJO.bigWig", "name": "ENCSR962VJO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR962VJO" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR962VJO/ENCSR962VJO_w_bias.bw", "name": "ENCSR962VJO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR962VJO" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR962VJO/ENCSR962VJO_wo_bias.bw", "name": "ENCSR962VJO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR962VJO" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR962VJO/full_ENCSR962VJO.counts.bigwig", "name": "ENCSR962VJO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR962VJO" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR962VJO/full_ENCSR962VJO.profile.bigwig", "name": "ENCSR962VJO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR962VJO" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female child (16 years)", "biosample term name": "adrenal gland", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR713KNQ/preprocessing/bigWigs/ENCSR713KNQ.bigWig", "name": "ENCSR713KNQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR713KNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (41 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR713KNQ/ENCSR713KNQ_w_bias.bw", "name": "ENCSR713KNQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR713KNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (41 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR713KNQ/ENCSR713KNQ_wo_bias.bw", "name": "ENCSR713KNQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR713KNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (41 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR713KNQ/full_ENCSR713KNQ.counts.bigwig", "name": "ENCSR713KNQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR713KNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (41 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR713KNQ/full_ENCSR713KNQ.profile.bigwig", "name": "ENCSR713KNQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR713KNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens aorta tissue female adult (41 years)", "biosample term name": "aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR324OTS/preprocessing/bigWigs/ENCSR324OTS.bigWig", "name": "ENCSR324OTS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR324OTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324OTS/ENCSR324OTS_w_bias.bw", "name": "ENCSR324OTS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR324OTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324OTS/ENCSR324OTS_wo_bias.bw", "name": "ENCSR324OTS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR324OTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324OTS/full_ENCSR324OTS.counts.bigwig", "name": "ENCSR324OTS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR324OTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324OTS/full_ENCSR324OTS.profile.bigwig", "name": "ENCSR324OTS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR324OTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR608NWP/preprocessing/bigWigs/ENCSR608NWP.bigWig", "name": "ENCSR608NWP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR608NWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608NWP/ENCSR608NWP_w_bias.bw", "name": "ENCSR608NWP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR608NWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608NWP/ENCSR608NWP_wo_bias.bw", "name": "ENCSR608NWP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR608NWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608NWP/full_ENCSR608NWP.counts.bigwig", "name": "ENCSR608NWP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR608NWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608NWP/full_ENCSR608NWP.profile.bigwig", "name": "ENCSR608NWP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR608NWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female child (16 years)", "biosample term name": "right lobe of liver", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR404TSP/preprocessing/bigWigs/ENCSR404TSP.bigWig", "name": "ENCSR404TSP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR404TSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR404TSP/ENCSR404TSP_w_bias.bw", "name": "ENCSR404TSP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR404TSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR404TSP/ENCSR404TSP_wo_bias.bw", "name": "ENCSR404TSP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR404TSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR404TSP/full_ENCSR404TSP.counts.bigwig", "name": "ENCSR404TSP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR404TSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR404TSP/full_ENCSR404TSP.profile.bigwig", "name": "ENCSR404TSP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR404TSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue female adult (61 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR895GSY/preprocessing/bigWigs/ENCSR895GSY.bigWig", "name": "ENCSR895GSY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR895GSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895GSY/ENCSR895GSY_w_bias.bw", "name": "ENCSR895GSY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895GSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895GSY/ENCSR895GSY_wo_bias.bw", "name": "ENCSR895GSY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895GSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895GSY/full_ENCSR895GSY.counts.bigwig", "name": "ENCSR895GSY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895GSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895GSY/full_ENCSR895GSY.profile.bigwig", "name": "ENCSR895GSY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895GSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium superior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR274XTS/preprocessing/bigWigs/ENCSR274XTS.bigWig", "name": "ENCSR274XTS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR274XTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274XTS/ENCSR274XTS_w_bias.bw", "name": "ENCSR274XTS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR274XTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274XTS/ENCSR274XTS_wo_bias.bw", "name": "ENCSR274XTS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR274XTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274XTS/full_ENCSR274XTS.counts.bigwig", "name": "ENCSR274XTS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR274XTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274XTS/full_ENCSR274XTS.profile.bigwig", "name": "ENCSR274XTS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR274XTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR496UJY/preprocessing/bigWigs/ENCSR496UJY.bigWig", "name": "ENCSR496UJY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR496UJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UJY/ENCSR496UJY_w_bias.bw", "name": "ENCSR496UJY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496UJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UJY/ENCSR496UJY_wo_bias.bw", "name": "ENCSR496UJY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496UJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UJY/full_ENCSR496UJY.counts.bigwig", "name": "ENCSR496UJY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496UJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UJY/full_ENCSR496UJY.profile.bigwig", "name": "ENCSR496UJY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496UJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR294YEJ/preprocessing/bigWigs/ENCSR294YEJ.bigWig", "name": "ENCSR294YEJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR294YEJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294YEJ/ENCSR294YEJ_w_bias.bw", "name": "ENCSR294YEJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR294YEJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294YEJ/ENCSR294YEJ_wo_bias.bw", "name": "ENCSR294YEJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR294YEJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294YEJ/full_ENCSR294YEJ.counts.bigwig", "name": "ENCSR294YEJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR294YEJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294YEJ/full_ENCSR294YEJ.profile.bigwig", "name": "ENCSR294YEJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR294YEJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR338NEI/preprocessing/bigWigs/ENCSR338NEI.bigWig", "name": "ENCSR338NEI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR338NEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR338NEI/ENCSR338NEI_w_bias.bw", "name": "ENCSR338NEI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR338NEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR338NEI/ENCSR338NEI_wo_bias.bw", "name": "ENCSR338NEI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR338NEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR338NEI/full_ENCSR338NEI.counts.bigwig", "name": "ENCSR338NEI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR338NEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR338NEI/full_ENCSR338NEI.profile.bigwig", "name": "ENCSR338NEI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR338NEI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue female adult (41 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR222CLC/preprocessing/bigWigs/ENCSR222CLC.bigWig", "name": "ENCSR222CLC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR222CLC" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR222CLC/ENCSR222CLC_w_bias.bw", "name": "ENCSR222CLC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR222CLC" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR222CLC/ENCSR222CLC_wo_bias.bw", "name": "ENCSR222CLC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR222CLC" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR222CLC/full_ENCSR222CLC.counts.bigwig", "name": "ENCSR222CLC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR222CLC" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR222CLC/full_ENCSR222CLC.profile.bigwig", "name": "ENCSR222CLC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR222CLC" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (69 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR747SEU/preprocessing/bigWigs/ENCSR747SEU.bigWig", "name": "ENCSR747SEU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR747SEU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (46 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR747SEU/ENCSR747SEU_w_bias.bw", "name": "ENCSR747SEU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR747SEU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (46 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR747SEU/ENCSR747SEU_wo_bias.bw", "name": "ENCSR747SEU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR747SEU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (46 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR747SEU/full_ENCSR747SEU.counts.bigwig", "name": "ENCSR747SEU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR747SEU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (46 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR747SEU/full_ENCSR747SEU.profile.bigwig", "name": "ENCSR747SEU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR747SEU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (46 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR450PWF/preprocessing/bigWigs/ENCSR450PWF.bigWig", "name": "ENCSR450PWF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR450PWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR450PWF/ENCSR450PWF_w_bias.bw", "name": "ENCSR450PWF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR450PWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR450PWF/ENCSR450PWF_wo_bias.bw", "name": "ENCSR450PWF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR450PWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR450PWF/full_ENCSR450PWF.counts.bigwig", "name": "ENCSR450PWF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR450PWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR450PWF/full_ENCSR450PWF.profile.bigwig", "name": "ENCSR450PWF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR450PWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thyroid gland tissue female adult (51 years)", "biosample term name": "thyroid gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR452RAX/preprocessing/bigWigs/ENCSR452RAX.bigWig", "name": "ENCSR452RAX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR452RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452RAX/ENCSR452RAX_w_bias.bw", "name": "ENCSR452RAX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452RAX/ENCSR452RAX_wo_bias.bw", "name": "ENCSR452RAX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR452RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452RAX/full_ENCSR452RAX.counts.bigwig", "name": "ENCSR452RAX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR452RAX/full_ENCSR452RAX.profile.bigwig", "name": "ENCSR452RAX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR452RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-6 for 8 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR468AKF/preprocessing/bigWigs/ENCSR468AKF.bigWig", "name": "ENCSR468AKF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR468AKF" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR468AKF/ENCSR468AKF_w_bias.bw", "name": "ENCSR468AKF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR468AKF" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR468AKF/ENCSR468AKF_wo_bias.bw", "name": "ENCSR468AKF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR468AKF" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR468AKF/full_ENCSR468AKF.counts.bigwig", "name": "ENCSR468AKF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR468AKF" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR468AKF/full_ENCSR468AKF.profile.bigwig", "name": "ENCSR468AKF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR468AKF" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (22 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR976XOY/preprocessing/bigWigs/ENCSR976XOY.bigWig", "name": "ENCSR976XOY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR976XOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens left forelimb tissue male embryo (81 days)", "biosample term name": "left forelimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR976XOY/ENCSR976XOY_w_bias.bw", "name": "ENCSR976XOY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR976XOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens left forelimb tissue male embryo (81 days)", "biosample term name": "left forelimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR976XOY/ENCSR976XOY_wo_bias.bw", "name": "ENCSR976XOY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR976XOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens left forelimb tissue male embryo (81 days)", "biosample term name": "left forelimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR976XOY/full_ENCSR976XOY.counts.bigwig", "name": "ENCSR976XOY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR976XOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens left forelimb tissue male embryo (81 days)", "biosample term name": "left forelimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR976XOY/full_ENCSR976XOY.profile.bigwig", "name": "ENCSR976XOY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR976XOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens left forelimb tissue male embryo (81 days)", "biosample term name": "left forelimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR245AXW/preprocessing/bigWigs/ENCSR245AXW.bigWig", "name": "ENCSR245AXW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR245AXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR245AXW/ENCSR245AXW_w_bias.bw", "name": "ENCSR245AXW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR245AXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR245AXW/ENCSR245AXW_wo_bias.bw", "name": "ENCSR245AXW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR245AXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR245AXW/full_ENCSR245AXW.counts.bigwig", "name": "ENCSR245AXW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR245AXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR245AXW/full_ENCSR245AXW.profile.bigwig", "name": "ENCSR245AXW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR245AXW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR496PSH/preprocessing/bigWigs/ENCSR496PSH.bigWig", "name": "ENCSR496PSH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR496PSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496PSH/ENCSR496PSH_w_bias.bw", "name": "ENCSR496PSH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496PSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496PSH/ENCSR496PSH_wo_bias.bw", "name": "ENCSR496PSH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496PSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496PSH/full_ENCSR496PSH.counts.bigwig", "name": "ENCSR496PSH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496PSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496PSH/full_ENCSR496PSH.profile.bigwig", "name": "ENCSR496PSH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496PSH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR656KLT/preprocessing/bigWigs/ENCSR656KLT.bigWig", "name": "ENCSR656KLT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR656KLT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656KLT/ENCSR656KLT_w_bias.bw", "name": "ENCSR656KLT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR656KLT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656KLT/ENCSR656KLT_wo_bias.bw", "name": "ENCSR656KLT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR656KLT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656KLT/full_ENCSR656KLT.counts.bigwig", "name": "ENCSR656KLT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR656KLT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656KLT/full_ENCSR656KLT.profile.bigwig", "name": "ENCSR656KLT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR656KLT" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR520BAD/preprocessing/bigWigs/ENCSR520BAD.bigWig", "name": "ENCSR520BAD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR520BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520BAD/ENCSR520BAD_w_bias.bw", "name": "ENCSR520BAD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR520BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520BAD/ENCSR520BAD_wo_bias.bw", "name": "ENCSR520BAD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR520BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520BAD/full_ENCSR520BAD.counts.bigwig", "name": "ENCSR520BAD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR520BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR520BAD/full_ENCSR520BAD.profile.bigwig", "name": "ENCSR520BAD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR520BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens gastrocnemius medialis tissue male adult (54 years)", "biosample term name": "gastrocnemius medialis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR866ODX/preprocessing/bigWigs/ENCSR866ODX.bigWig", "name": "ENCSR866ODX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR866ODX" ], "assay": "DNASE", "biosample summary": "Homo sapiens testis tissue male adult (37 years)", "biosample term name": "testis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866ODX/ENCSR866ODX_w_bias.bw", "name": "ENCSR866ODX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR866ODX" ], "assay": "DNASE", "biosample summary": "Homo sapiens testis tissue male adult (37 years)", "biosample term name": "testis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866ODX/ENCSR866ODX_wo_bias.bw", "name": "ENCSR866ODX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR866ODX" ], "assay": "DNASE", "biosample summary": "Homo sapiens testis tissue male adult (37 years)", "biosample term name": "testis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866ODX/full_ENCSR866ODX.counts.bigwig", "name": "ENCSR866ODX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR866ODX" ], "assay": "DNASE", "biosample summary": "Homo sapiens testis tissue male adult (37 years)", "biosample term name": "testis", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866ODX/full_ENCSR866ODX.profile.bigwig", "name": "ENCSR866ODX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR866ODX" ], "assay": "DNASE", "biosample summary": "Homo sapiens testis tissue male adult (37 years)", "biosample term name": "testis", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR214NLQ/preprocessing/bigWigs/ENCSR214NLQ.bigWig", "name": "ENCSR214NLQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR214NLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR214NLQ/ENCSR214NLQ_w_bias.bw", "name": "ENCSR214NLQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR214NLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR214NLQ/ENCSR214NLQ_wo_bias.bw", "name": "ENCSR214NLQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR214NLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR214NLQ/full_ENCSR214NLQ.counts.bigwig", "name": "ENCSR214NLQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR214NLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR214NLQ/full_ENCSR214NLQ.profile.bigwig", "name": "ENCSR214NLQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR214NLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (69 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR058VBM/preprocessing/bigWigs/ENCSR058VBM.bigWig", "name": "ENCSR058VBM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR058VBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (37 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058VBM/ENCSR058VBM_w_bias.bw", "name": "ENCSR058VBM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR058VBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (37 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058VBM/ENCSR058VBM_wo_bias.bw", "name": "ENCSR058VBM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR058VBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (37 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058VBM/full_ENCSR058VBM.counts.bigwig", "name": "ENCSR058VBM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR058VBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (37 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058VBM/full_ENCSR058VBM.profile.bigwig", "name": "ENCSR058VBM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR058VBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (37 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR717BBR/preprocessing/bigWigs/ENCSR717BBR.bigWig", "name": "ENCSR717BBR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR717BBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR717BBR/ENCSR717BBR_w_bias.bw", "name": "ENCSR717BBR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR717BBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR717BBR/ENCSR717BBR_wo_bias.bw", "name": "ENCSR717BBR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR717BBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR717BBR/full_ENCSR717BBR.counts.bigwig", "name": "ENCSR717BBR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR717BBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR717BBR/full_ENCSR717BBR.profile.bigwig", "name": "ENCSR717BBR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR717BBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR294DND/preprocessing/bigWigs/ENCSR294DND.bigWig", "name": "ENCSR294DND observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR294DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294DND/ENCSR294DND_w_bias.bw", "name": "ENCSR294DND DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR294DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294DND/ENCSR294DND_wo_bias.bw", "name": "ENCSR294DND DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR294DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294DND/full_ENCSR294DND.counts.bigwig", "name": "ENCSR294DND DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR294DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR294DND/full_ENCSR294DND.profile.bigwig", "name": "ENCSR294DND DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR294DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR133QZB/preprocessing/bigWigs/ENCSR133QZB.bigWig", "name": "ENCSR133QZB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR133QZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133QZB/ENCSR133QZB_w_bias.bw", "name": "ENCSR133QZB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133QZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133QZB/ENCSR133QZB_wo_bias.bw", "name": "ENCSR133QZB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133QZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133QZB/full_ENCSR133QZB.counts.bigwig", "name": "ENCSR133QZB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133QZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133QZB/full_ENCSR133QZB.profile.bigwig", "name": "ENCSR133QZB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133QZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR283TME/preprocessing/bigWigs/ENCSR283TME.bigWig", "name": "ENCSR283TME observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR283TME" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283TME/ENCSR283TME_w_bias.bw", "name": "ENCSR283TME DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR283TME" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283TME/ENCSR283TME_wo_bias.bw", "name": "ENCSR283TME DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR283TME" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283TME/full_ENCSR283TME.counts.bigwig", "name": "ENCSR283TME DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR283TME" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283TME/full_ENCSR283TME.profile.bigwig", "name": "ENCSR283TME DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR283TME" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (30 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR299QGI/preprocessing/bigWigs/ENCSR299QGI.bigWig", "name": "ENCSR299QGI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR299QGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299QGI/ENCSR299QGI_w_bias.bw", "name": "ENCSR299QGI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR299QGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299QGI/ENCSR299QGI_wo_bias.bw", "name": "ENCSR299QGI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR299QGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299QGI/full_ENCSR299QGI.counts.bigwig", "name": "ENCSR299QGI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR299QGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299QGI/full_ENCSR299QGI.profile.bigwig", "name": "ENCSR299QGI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR299QGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (43 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR720TCN/preprocessing/bigWigs/ENCSR720TCN.bigWig", "name": "ENCSR720TCN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR720TCN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR720TCN/ENCSR720TCN_w_bias.bw", "name": "ENCSR720TCN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR720TCN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR720TCN/ENCSR720TCN_wo_bias.bw", "name": "ENCSR720TCN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR720TCN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR720TCN/full_ENCSR720TCN.counts.bigwig", "name": "ENCSR720TCN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR720TCN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR720TCN/full_ENCSR720TCN.profile.bigwig", "name": "ENCSR720TCN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR720TCN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days", "biosample term name": "activated CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR085XKS/preprocessing/bigWigs/ENCSR085XKS.bigWig", "name": "ENCSR085XKS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR085XKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (80 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085XKS/ENCSR085XKS_w_bias.bw", "name": "ENCSR085XKS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR085XKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (80 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085XKS/ENCSR085XKS_wo_bias.bw", "name": "ENCSR085XKS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR085XKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (80 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085XKS/full_ENCSR085XKS.counts.bigwig", "name": "ENCSR085XKS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR085XKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (80 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085XKS/full_ENCSR085XKS.profile.bigwig", "name": "ENCSR085XKS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR085XKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (80 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR409ZBD/preprocessing/bigWigs/ENCSR409ZBD.bigWig", "name": "ENCSR409ZBD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR409ZBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR409ZBD/ENCSR409ZBD_w_bias.bw", "name": "ENCSR409ZBD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR409ZBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR409ZBD/ENCSR409ZBD_wo_bias.bw", "name": "ENCSR409ZBD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR409ZBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR409ZBD/full_ENCSR409ZBD.counts.bigwig", "name": "ENCSR409ZBD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR409ZBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR409ZBD/full_ENCSR409ZBD.profile.bigwig", "name": "ENCSR409ZBD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR409ZBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (47 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR785JXR/preprocessing/bigWigs/ENCSR785JXR.bigWig", "name": "ENCSR785JXR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR785JXR" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of right lung tissue male adult (60 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785JXR/ENCSR785JXR_w_bias.bw", "name": "ENCSR785JXR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR785JXR" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of right lung tissue male adult (60 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785JXR/ENCSR785JXR_wo_bias.bw", "name": "ENCSR785JXR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR785JXR" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of right lung tissue male adult (60 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785JXR/full_ENCSR785JXR.counts.bigwig", "name": "ENCSR785JXR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR785JXR" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of right lung tissue male adult (60 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785JXR/full_ENCSR785JXR.profile.bigwig", "name": "ENCSR785JXR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR785JXR" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower lobe of right lung tissue male adult (60 years)", "biosample term name": "lower lobe of right lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR431UEM/preprocessing/bigWigs/ENCSR431UEM.bigWig", "name": "ENCSR431UEM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR431UEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens left hindlimb tissue male embryo (81 days)", "biosample term name": "left hindlimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR431UEM/ENCSR431UEM_w_bias.bw", "name": "ENCSR431UEM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR431UEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens left hindlimb tissue male embryo (81 days)", "biosample term name": "left hindlimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR431UEM/ENCSR431UEM_wo_bias.bw", "name": "ENCSR431UEM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR431UEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens left hindlimb tissue male embryo (81 days)", "biosample term name": "left hindlimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR431UEM/full_ENCSR431UEM.counts.bigwig", "name": "ENCSR431UEM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR431UEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens left hindlimb tissue male embryo (81 days)", "biosample term name": "left hindlimb", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR431UEM/full_ENCSR431UEM.profile.bigwig", "name": "ENCSR431UEM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR431UEM" ], "assay": "DNASE", "biosample summary": "Homo sapiens left hindlimb tissue male embryo (81 days)", "biosample term name": "left hindlimb", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR984SQJ/preprocessing/bigWigs/ENCSR984SQJ.bigWig", "name": "ENCSR984SQJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR984SQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right atrium auricular region tissue female adult (53 years)", "biosample term name": "right atrium auricular region", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SQJ/ENCSR984SQJ_w_bias.bw", "name": "ENCSR984SQJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984SQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right atrium auricular region tissue female adult (53 years)", "biosample term name": "right atrium auricular region", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SQJ/ENCSR984SQJ_wo_bias.bw", "name": "ENCSR984SQJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984SQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right atrium auricular region tissue female adult (53 years)", "biosample term name": "right atrium auricular region", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SQJ/full_ENCSR984SQJ.counts.bigwig", "name": "ENCSR984SQJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984SQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right atrium auricular region tissue female adult (53 years)", "biosample term name": "right atrium auricular region", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SQJ/full_ENCSR984SQJ.profile.bigwig", "name": "ENCSR984SQJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984SQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right atrium auricular region tissue female adult (53 years)", "biosample term name": "right atrium auricular region", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR259GYP/preprocessing/bigWigs/ENCSR259GYP.bigWig", "name": "ENCSR259GYP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR259GYP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR259GYP/ENCSR259GYP_w_bias.bw", "name": "ENCSR259GYP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR259GYP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR259GYP/ENCSR259GYP_wo_bias.bw", "name": "ENCSR259GYP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR259GYP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR259GYP/full_ENCSR259GYP.counts.bigwig", "name": "ENCSR259GYP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR259GYP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR259GYP/full_ENCSR259GYP.profile.bigwig", "name": "ENCSR259GYP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR259GYP" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female adult (51 years)", "biosample term name": "adrenal gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR363BTB/preprocessing/bigWigs/ENCSR363BTB.bigWig", "name": "ENCSR363BTB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR363BTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363BTB/ENCSR363BTB_w_bias.bw", "name": "ENCSR363BTB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR363BTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363BTB/ENCSR363BTB_wo_bias.bw", "name": "ENCSR363BTB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR363BTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363BTB/full_ENCSR363BTB.counts.bigwig", "name": "ENCSR363BTB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR363BTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR363BTB/full_ENCSR363BTB.profile.bigwig", "name": "ENCSR363BTB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR363BTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR082PDJ/preprocessing/bigWigs/ENCSR082PDJ.bigWig", "name": "ENCSR082PDJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR082PDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female child (16 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR082PDJ/ENCSR082PDJ_w_bias.bw", "name": "ENCSR082PDJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR082PDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female child (16 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR082PDJ/ENCSR082PDJ_wo_bias.bw", "name": "ENCSR082PDJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR082PDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female child (16 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR082PDJ/full_ENCSR082PDJ.counts.bigwig", "name": "ENCSR082PDJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR082PDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female child (16 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR082PDJ/full_ENCSR082PDJ.profile.bigwig", "name": "ENCSR082PDJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR082PDJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens psoas muscle tissue female child (16 years)", "biosample term name": "psoas muscle", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR223KKX/preprocessing/bigWigs/ENCSR223KKX.bigWig", "name": "ENCSR223KKX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR223KKX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223KKX/ENCSR223KKX_w_bias.bw", "name": "ENCSR223KKX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR223KKX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223KKX/ENCSR223KKX_wo_bias.bw", "name": "ENCSR223KKX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR223KKX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223KKX/full_ENCSR223KKX.counts.bigwig", "name": "ENCSR223KKX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR223KKX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223KKX/full_ENCSR223KKX.profile.bigwig", "name": "ENCSR223KKX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR223KKX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR217OHA/preprocessing/bigWigs/ENCSR217OHA.bigWig", "name": "ENCSR217OHA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR217OHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217OHA/ENCSR217OHA_w_bias.bw", "name": "ENCSR217OHA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217OHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217OHA/ENCSR217OHA_wo_bias.bw", "name": "ENCSR217OHA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217OHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217OHA/full_ENCSR217OHA.counts.bigwig", "name": "ENCSR217OHA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217OHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217OHA/full_ENCSR217OHA.profile.bigwig", "name": "ENCSR217OHA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217OHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR395HAE/preprocessing/bigWigs/ENCSR395HAE.bigWig", "name": "ENCSR395HAE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR395HAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395HAE/ENCSR395HAE_w_bias.bw", "name": "ENCSR395HAE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR395HAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395HAE/ENCSR395HAE_wo_bias.bw", "name": "ENCSR395HAE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR395HAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395HAE/full_ENCSR395HAE.counts.bigwig", "name": "ENCSR395HAE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR395HAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR395HAE/full_ENCSR395HAE.profile.bigwig", "name": "ENCSR395HAE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR395HAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue female adult (59 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR802NBC/preprocessing/bigWigs/ENCSR802NBC.bigWig", "name": "ENCSR802NBC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR802NBC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802NBC/ENCSR802NBC_w_bias.bw", "name": "ENCSR802NBC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802NBC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802NBC/ENCSR802NBC_wo_bias.bw", "name": "ENCSR802NBC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802NBC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802NBC/full_ENCSR802NBC.counts.bigwig", "name": "ENCSR802NBC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802NBC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802NBC/full_ENCSR802NBC.profile.bigwig", "name": "ENCSR802NBC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802NBC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR562FNN/preprocessing/bigWigs/ENCSR562FNN.bigWig", "name": "ENCSR562FNN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR562FNN" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue female embryo (101 days) and female embryo (113 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562FNN/ENCSR562FNN_w_bias.bw", "name": "ENCSR562FNN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR562FNN" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue female embryo (101 days) and female embryo (113 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562FNN/ENCSR562FNN_wo_bias.bw", "name": "ENCSR562FNN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR562FNN" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue female embryo (101 days) and female embryo (113 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562FNN/full_ENCSR562FNN.counts.bigwig", "name": "ENCSR562FNN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR562FNN" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue female embryo (101 days) and female embryo (113 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562FNN/full_ENCSR562FNN.profile.bigwig", "name": "ENCSR562FNN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR562FNN" ], "assay": "DNASE", "biosample summary": "Homo sapiens liver tissue female embryo (101 days) and female embryo (113 days)", "biosample term name": "liver", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR330LFP/preprocessing/bigWigs/ENCSR330LFP.bigWig", "name": "ENCSR330LFP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR330LFP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330LFP/ENCSR330LFP_w_bias.bw", "name": "ENCSR330LFP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR330LFP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330LFP/ENCSR330LFP_wo_bias.bw", "name": "ENCSR330LFP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR330LFP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330LFP/full_ENCSR330LFP.counts.bigwig", "name": "ENCSR330LFP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR330LFP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330LFP/full_ENCSR330LFP.profile.bigwig", "name": "ENCSR330LFP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR330LFP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR507DQC/preprocessing/bigWigs/ENCSR507DQC.bigWig", "name": "ENCSR507DQC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR507DQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507DQC/ENCSR507DQC_w_bias.bw", "name": "ENCSR507DQC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR507DQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507DQC/ENCSR507DQC_wo_bias.bw", "name": "ENCSR507DQC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR507DQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507DQC/full_ENCSR507DQC.counts.bigwig", "name": "ENCSR507DQC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR507DQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507DQC/full_ENCSR507DQC.profile.bigwig", "name": "ENCSR507DQC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR507DQC" ], "assay": "DNASE", "biosample summary": "Homo sapiens mucosa of descending colon tissue male adult (26 years)", "biosample term name": "mucosa of descending colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR650FLQ/preprocessing/bigWigs/ENCSR650FLQ.bigWig", "name": "ENCSR650FLQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR650FLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (54 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650FLQ/ENCSR650FLQ_w_bias.bw", "name": "ENCSR650FLQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR650FLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (54 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650FLQ/ENCSR650FLQ_wo_bias.bw", "name": "ENCSR650FLQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR650FLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (54 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650FLQ/full_ENCSR650FLQ.counts.bigwig", "name": "ENCSR650FLQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR650FLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (54 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650FLQ/full_ENCSR650FLQ.profile.bigwig", "name": "ENCSR650FLQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR650FLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue male adult (54 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR642BXP/preprocessing/bigWigs/ENCSR642BXP.bigWig", "name": "ENCSR642BXP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR642BXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-12 subunit beta for 1 hour, Interleukin-12 subunit alpha for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642BXP/ENCSR642BXP_w_bias.bw", "name": "ENCSR642BXP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR642BXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-12 subunit beta for 1 hour, Interleukin-12 subunit alpha for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642BXP/ENCSR642BXP_wo_bias.bw", "name": "ENCSR642BXP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR642BXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-12 subunit beta for 1 hour, Interleukin-12 subunit alpha for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642BXP/full_ENCSR642BXP.counts.bigwig", "name": "ENCSR642BXP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR642BXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-12 subunit beta for 1 hour, Interleukin-12 subunit alpha for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642BXP/full_ENCSR642BXP.profile.bigwig", "name": "ENCSR642BXP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR642BXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-12 subunit beta for 1 hour, Interleukin-12 subunit alpha for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR161ZGA/preprocessing/bigWigs/ENCSR161ZGA.bigWig", "name": "ENCSR161ZGA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR161ZGA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR161ZGA/ENCSR161ZGA_w_bias.bw", "name": "ENCSR161ZGA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR161ZGA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR161ZGA/ENCSR161ZGA_wo_bias.bw", "name": "ENCSR161ZGA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR161ZGA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR161ZGA/full_ENCSR161ZGA.counts.bigwig", "name": "ENCSR161ZGA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR161ZGA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR161ZGA/full_ENCSR161ZGA.profile.bigwig", "name": "ENCSR161ZGA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR161ZGA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR129BZE/preprocessing/bigWigs/ENCSR129BZE.bigWig", "name": "ENCSR129BZE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR129BZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (53 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129BZE/ENCSR129BZE_w_bias.bw", "name": "ENCSR129BZE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129BZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (53 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129BZE/ENCSR129BZE_wo_bias.bw", "name": "ENCSR129BZE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129BZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (53 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129BZE/full_ENCSR129BZE.counts.bigwig", "name": "ENCSR129BZE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129BZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (53 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129BZE/full_ENCSR129BZE.profile.bigwig", "name": "ENCSR129BZE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129BZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens uterus tissue female adult (53 years)", "biosample term name": "uterus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR239XNU/preprocessing/bigWigs/ENCSR239XNU.bigWig", "name": "ENCSR239XNU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR239XNU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years)", "biosample term name": "CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239XNU/ENCSR239XNU_w_bias.bw", "name": "ENCSR239XNU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR239XNU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years)", "biosample term name": "CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239XNU/ENCSR239XNU_wo_bias.bw", "name": "ENCSR239XNU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR239XNU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years)", "biosample term name": "CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239XNU/full_ENCSR239XNU.counts.bigwig", "name": "ENCSR239XNU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR239XNU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years)", "biosample term name": "CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR239XNU/full_ENCSR239XNU.profile.bigwig", "name": "ENCSR239XNU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR239XNU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years)", "biosample term name": "CD4-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR702DPD/preprocessing/bigWigs/ENCSR702DPD.bigWig", "name": "ENCSR702DPD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR702DPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (53 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR702DPD/ENCSR702DPD_w_bias.bw", "name": "ENCSR702DPD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR702DPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (53 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR702DPD/ENCSR702DPD_wo_bias.bw", "name": "ENCSR702DPD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR702DPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (53 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR702DPD/full_ENCSR702DPD.counts.bigwig", "name": "ENCSR702DPD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR702DPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (53 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR702DPD/full_ENCSR702DPD.profile.bigwig", "name": "ENCSR702DPD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR702DPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens upper lobe of left lung tissue female adult (53 years)", "biosample term name": "upper lobe of left lung", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR387EYA/preprocessing/bigWigs/ENCSR387EYA.bigWig", "name": "ENCSR387EYA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR387EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR387EYA/ENCSR387EYA_w_bias.bw", "name": "ENCSR387EYA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR387EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR387EYA/ENCSR387EYA_wo_bias.bw", "name": "ENCSR387EYA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR387EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR387EYA/full_ENCSR387EYA.counts.bigwig", "name": "ENCSR387EYA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR387EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR387EYA/full_ENCSR387EYA.profile.bigwig", "name": "ENCSR387EYA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR387EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR856XGY/preprocessing/bigWigs/ENCSR856XGY.bigWig", "name": "ENCSR856XGY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR856XGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR856XGY/ENCSR856XGY_w_bias.bw", "name": "ENCSR856XGY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR856XGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR856XGY/ENCSR856XGY_wo_bias.bw", "name": "ENCSR856XGY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR856XGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR856XGY/full_ENCSR856XGY.counts.bigwig", "name": "ENCSR856XGY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR856XGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR856XGY/full_ENCSR856XGY.profile.bigwig", "name": "ENCSR856XGY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR856XGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR279SXQ/preprocessing/bigWigs/ENCSR279SXQ.bigWig", "name": "ENCSR279SXQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR279SXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR279SXQ/ENCSR279SXQ_w_bias.bw", "name": "ENCSR279SXQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR279SXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR279SXQ/ENCSR279SXQ_wo_bias.bw", "name": "ENCSR279SXQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR279SXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR279SXQ/full_ENCSR279SXQ.counts.bigwig", "name": "ENCSR279SXQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR279SXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR279SXQ/full_ENCSR279SXQ.profile.bigwig", "name": "ENCSR279SXQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR279SXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (46 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR867XFA/preprocessing/bigWigs/ENCSR867XFA.bigWig", "name": "ENCSR867XFA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR867XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (59 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR867XFA/ENCSR867XFA_w_bias.bw", "name": "ENCSR867XFA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR867XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (59 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR867XFA/ENCSR867XFA_wo_bias.bw", "name": "ENCSR867XFA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR867XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (59 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR867XFA/full_ENCSR867XFA.counts.bigwig", "name": "ENCSR867XFA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR867XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (59 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR867XFA/full_ENCSR867XFA.profile.bigwig", "name": "ENCSR867XFA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR867XFA" ], "assay": "DNASE", "biosample summary": "Homo sapiens left colon tissue female adult (59 years)", "biosample term name": "left colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR564FZH/preprocessing/bigWigs/ENCSR564FZH.bigWig", "name": "ENCSR564FZH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR564FZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens prostate gland tissue male adult (37 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR564FZH/ENCSR564FZH_w_bias.bw", "name": "ENCSR564FZH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR564FZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens prostate gland tissue male adult (37 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR564FZH/ENCSR564FZH_wo_bias.bw", "name": "ENCSR564FZH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR564FZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens prostate gland tissue male adult (37 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR564FZH/full_ENCSR564FZH.counts.bigwig", "name": "ENCSR564FZH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR564FZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens prostate gland tissue male adult (37 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR564FZH/full_ENCSR564FZH.profile.bigwig", "name": "ENCSR564FZH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR564FZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens prostate gland tissue male adult (37 years)", "biosample term name": "prostate gland", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR709PZI/preprocessing/bigWigs/ENCSR709PZI.bigWig", "name": "ENCSR709PZI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR709PZI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709PZI/ENCSR709PZI_w_bias.bw", "name": "ENCSR709PZI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR709PZI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709PZI/ENCSR709PZI_wo_bias.bw", "name": "ENCSR709PZI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR709PZI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709PZI/full_ENCSR709PZI.counts.bigwig", "name": "ENCSR709PZI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR709PZI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709PZI/full_ENCSR709PZI.profile.bigwig", "name": "ENCSR709PZI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR709PZI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR561ZLY/preprocessing/bigWigs/ENCSR561ZLY.bigWig", "name": "ENCSR561ZLY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR561ZLY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR561ZLY/ENCSR561ZLY_w_bias.bw", "name": "ENCSR561ZLY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR561ZLY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR561ZLY/ENCSR561ZLY_wo_bias.bw", "name": "ENCSR561ZLY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR561ZLY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR561ZLY/full_ENCSR561ZLY.counts.bigwig", "name": "ENCSR561ZLY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR561ZLY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR561ZLY/full_ENCSR561ZLY.profile.bigwig", "name": "ENCSR561ZLY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR561ZLY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR597UIG/preprocessing/bigWigs/ENCSR597UIG.bigWig", "name": "ENCSR597UIG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR597UIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (41 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597UIG/ENCSR597UIG_w_bias.bw", "name": "ENCSR597UIG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR597UIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (41 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597UIG/ENCSR597UIG_wo_bias.bw", "name": "ENCSR597UIG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR597UIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (41 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597UIG/full_ENCSR597UIG.counts.bigwig", "name": "ENCSR597UIG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR597UIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (41 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597UIG/full_ENCSR597UIG.profile.bigwig", "name": "ENCSR597UIG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR597UIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens spleen tissue female adult (41 years)", "biosample term name": "spleen", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR775KLH/preprocessing/bigWigs/ENCSR775KLH.bigWig", "name": "ENCSR775KLH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR775KLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR775KLH/ENCSR775KLH_w_bias.bw", "name": "ENCSR775KLH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR775KLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR775KLH/ENCSR775KLH_wo_bias.bw", "name": "ENCSR775KLH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR775KLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR775KLH/full_ENCSR775KLH.counts.bigwig", "name": "ENCSR775KLH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR775KLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR775KLH/full_ENCSR775KLH.profile.bigwig", "name": "ENCSR775KLH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR775KLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR006IMH/preprocessing/bigWigs/ENCSR006IMH.bigWig", "name": "ENCSR006IMH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR006IMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006IMH/ENCSR006IMH_w_bias.bw", "name": "ENCSR006IMH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR006IMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006IMH/ENCSR006IMH_wo_bias.bw", "name": "ENCSR006IMH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR006IMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006IMH/full_ENCSR006IMH.counts.bigwig", "name": "ENCSR006IMH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR006IMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR006IMH/full_ENCSR006IMH.profile.bigwig", "name": "ENCSR006IMH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR006IMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue female adult (53 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR336QAO/preprocessing/bigWigs/ENCSR336QAO.bigWig", "name": "ENCSR336QAO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR336QAO" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon gamma for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336QAO/ENCSR336QAO_w_bias.bw", "name": "ENCSR336QAO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR336QAO" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon gamma for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336QAO/ENCSR336QAO_wo_bias.bw", "name": "ENCSR336QAO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR336QAO" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon gamma for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336QAO/full_ENCSR336QAO.counts.bigwig", "name": "ENCSR336QAO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR336QAO" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon gamma for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR336QAO/full_ENCSR336QAO.profile.bigwig", "name": "ENCSR336QAO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR336QAO" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (26 years) treated with Interferon gamma for 1 hour", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR383SNM/preprocessing/bigWigs/ENCSR383SNM.bigWig", "name": "ENCSR383SNM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR383SNM" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.11", "biosample term name": "iPS DF 19.11", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383SNM/ENCSR383SNM_w_bias.bw", "name": "ENCSR383SNM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR383SNM" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.11", "biosample term name": "iPS DF 19.11", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383SNM/ENCSR383SNM_wo_bias.bw", "name": "ENCSR383SNM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR383SNM" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.11", "biosample term name": "iPS DF 19.11", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383SNM/full_ENCSR383SNM.counts.bigwig", "name": "ENCSR383SNM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR383SNM" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.11", "biosample term name": "iPS DF 19.11", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR383SNM/full_ENCSR383SNM.profile.bigwig", "name": "ENCSR383SNM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR383SNM" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.11", "biosample term name": "iPS DF 19.11", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR888ZIZ/preprocessing/bigWigs/ENCSR888ZIZ.bigWig", "name": "ENCSR888ZIZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR888ZIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (85 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR888ZIZ/ENCSR888ZIZ_w_bias.bw", "name": "ENCSR888ZIZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR888ZIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (85 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR888ZIZ/ENCSR888ZIZ_wo_bias.bw", "name": "ENCSR888ZIZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR888ZIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (85 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR888ZIZ/full_ENCSR888ZIZ.counts.bigwig", "name": "ENCSR888ZIZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR888ZIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (85 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR888ZIZ/full_ENCSR888ZIZ.profile.bigwig", "name": "ENCSR888ZIZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR888ZIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (85 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR598RVJ/preprocessing/bigWigs/ENCSR598RVJ.bigWig", "name": "ENCSR598RVJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR598RVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (40 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR598RVJ/ENCSR598RVJ_w_bias.bw", "name": "ENCSR598RVJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR598RVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (40 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR598RVJ/ENCSR598RVJ_wo_bias.bw", "name": "ENCSR598RVJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR598RVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (40 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR598RVJ/full_ENCSR598RVJ.counts.bigwig", "name": "ENCSR598RVJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR598RVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (40 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR598RVJ/full_ENCSR598RVJ.profile.bigwig", "name": "ENCSR598RVJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR598RVJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart left ventricle tissue male adult (40 years)", "biosample term name": "heart left ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR164TBP/preprocessing/bigWigs/ENCSR164TBP.bigWig", "name": "ENCSR164TBP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR164TBP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (47 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164TBP/ENCSR164TBP_w_bias.bw", "name": "ENCSR164TBP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR164TBP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (47 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164TBP/ENCSR164TBP_wo_bias.bw", "name": "ENCSR164TBP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR164TBP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (47 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164TBP/full_ENCSR164TBP.counts.bigwig", "name": "ENCSR164TBP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR164TBP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (47 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164TBP/full_ENCSR164TBP.profile.bigwig", "name": "ENCSR164TBP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR164TBP" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (47 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR688AWP/preprocessing/bigWigs/ENCSR688AWP.bigWig", "name": "ENCSR688AWP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR688AWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688AWP/ENCSR688AWP_w_bias.bw", "name": "ENCSR688AWP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR688AWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688AWP/ENCSR688AWP_wo_bias.bw", "name": "ENCSR688AWP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR688AWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688AWP/full_ENCSR688AWP.counts.bigwig", "name": "ENCSR688AWP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR688AWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688AWP/full_ENCSR688AWP.profile.bigwig", "name": "ENCSR688AWP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR688AWP" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR623PVB/preprocessing/bigWigs/ENCSR623PVB.bigWig", "name": "ENCSR623PVB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR623PVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (30 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR623PVB/ENCSR623PVB_w_bias.bw", "name": "ENCSR623PVB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR623PVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (30 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR623PVB/ENCSR623PVB_wo_bias.bw", "name": "ENCSR623PVB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR623PVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (30 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR623PVB/full_ENCSR623PVB.counts.bigwig", "name": "ENCSR623PVB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR623PVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (30 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR623PVB/full_ENCSR623PVB.profile.bigwig", "name": "ENCSR623PVB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR623PVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (30 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR241BNZ/preprocessing/bigWigs/ENCSR241BNZ.bigWig", "name": "ENCSR241BNZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR241BNZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (30 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR241BNZ/ENCSR241BNZ_w_bias.bw", "name": "ENCSR241BNZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR241BNZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (30 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR241BNZ/ENCSR241BNZ_wo_bias.bw", "name": "ENCSR241BNZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR241BNZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (30 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR241BNZ/full_ENCSR241BNZ.counts.bigwig", "name": "ENCSR241BNZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR241BNZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (30 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR241BNZ/full_ENCSR241BNZ.profile.bigwig", "name": "ENCSR241BNZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR241BNZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte male adult (30 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR933GMM/preprocessing/bigWigs/ENCSR933GMM.bigWig", "name": "ENCSR933GMM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR933GMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (41 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933GMM/ENCSR933GMM_w_bias.bw", "name": "ENCSR933GMM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR933GMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (41 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933GMM/ENCSR933GMM_wo_bias.bw", "name": "ENCSR933GMM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR933GMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (41 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933GMM/full_ENCSR933GMM.counts.bigwig", "name": "ENCSR933GMM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR933GMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (41 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933GMM/full_ENCSR933GMM.profile.bigwig", "name": "ENCSR933GMM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR933GMM" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lobe of liver tissue female adult (41 years)", "biosample term name": "right lobe of liver", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR330ZBO/preprocessing/bigWigs/ENCSR330ZBO.bigWig", "name": "ENCSR330ZBO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR330ZBO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330ZBO/ENCSR330ZBO_w_bias.bw", "name": "ENCSR330ZBO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR330ZBO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330ZBO/ENCSR330ZBO_wo_bias.bw", "name": "ENCSR330ZBO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR330ZBO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330ZBO/full_ENCSR330ZBO.counts.bigwig", "name": "ENCSR330ZBO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR330ZBO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR330ZBO/full_ENCSR330ZBO.profile.bigwig", "name": "ENCSR330ZBO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR330ZBO" ], "assay": "DNASE", "biosample summary": "Homo sapiens ovary tissue female adult (59 years)", "biosample term name": "ovary", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR731KDL/preprocessing/bigWigs/ENCSR731KDL.bigWig", "name": "ENCSR731KDL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR731KDL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (48 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731KDL/ENCSR731KDL_w_bias.bw", "name": "ENCSR731KDL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR731KDL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (48 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731KDL/ENCSR731KDL_wo_bias.bw", "name": "ENCSR731KDL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR731KDL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (48 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731KDL/full_ENCSR731KDL.counts.bigwig", "name": "ENCSR731KDL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR731KDL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (48 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731KDL/full_ENCSR731KDL.profile.bigwig", "name": "ENCSR731KDL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR731KDL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (48 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR663MNQ/preprocessing/bigWigs/ENCSR663MNQ.bigWig", "name": "ENCSR663MNQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR663MNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR663MNQ/ENCSR663MNQ_w_bias.bw", "name": "ENCSR663MNQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR663MNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR663MNQ/ENCSR663MNQ_wo_bias.bw", "name": "ENCSR663MNQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR663MNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR663MNQ/full_ENCSR663MNQ.counts.bigwig", "name": "ENCSR663MNQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR663MNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR663MNQ/full_ENCSR663MNQ.profile.bigwig", "name": "ENCSR663MNQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR663MNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPZ/preprocessing/bigWigs/ENCSR000EPZ.bigWig", "name": "ENCSR000EPZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPZ/ENCSR000EPZ_w_bias.bw", "name": "ENCSR000EPZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPZ/ENCSR000EPZ_wo_bias.bw", "name": "ENCSR000EPZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPZ/full_ENCSR000EPZ.counts.bigwig", "name": "ENCSR000EPZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPZ/full_ENCSR000EPZ.profile.bigwig", "name": "ENCSR000EPZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-SH treated with 6 \u03bcM all-trans-retinoic acid for 48 hours", "biosample term name": "SK-N-SH", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR361DND/preprocessing/bigWigs/ENCSR361DND.bigWig", "name": "ENCSR361DND observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR361DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower leg skin tissue male adult (37 years)", "biosample term name": "lower leg skin", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR361DND/ENCSR361DND_w_bias.bw", "name": "ENCSR361DND DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR361DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower leg skin tissue male adult (37 years)", "biosample term name": "lower leg skin", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR361DND/ENCSR361DND_wo_bias.bw", "name": "ENCSR361DND DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR361DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower leg skin tissue male adult (37 years)", "biosample term name": "lower leg skin", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR361DND/full_ENCSR361DND.counts.bigwig", "name": "ENCSR361DND DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR361DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower leg skin tissue male adult (37 years)", "biosample term name": "lower leg skin", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR361DND/full_ENCSR361DND.profile.bigwig", "name": "ENCSR361DND DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR361DND" ], "assay": "DNASE", "biosample summary": "Homo sapiens lower leg skin tissue male adult (37 years)", "biosample term name": "lower leg skin", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR682ZZT/preprocessing/bigWigs/ENCSR682ZZT.bigWig", "name": "ENCSR682ZZT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR682ZZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR682ZZT/ENCSR682ZZT_w_bias.bw", "name": "ENCSR682ZZT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR682ZZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR682ZZT/ENCSR682ZZT_wo_bias.bw", "name": "ENCSR682ZZT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR682ZZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR682ZZT/full_ENCSR682ZZT.counts.bigwig", "name": "ENCSR682ZZT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR682ZZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR682ZZT/full_ENCSR682ZZT.profile.bigwig", "name": "ENCSR682ZZT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR682ZZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR794TLA/preprocessing/bigWigs/ENCSR794TLA.bigWig", "name": "ENCSR794TLA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR794TLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR794TLA/ENCSR794TLA_w_bias.bw", "name": "ENCSR794TLA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR794TLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR794TLA/ENCSR794TLA_wo_bias.bw", "name": "ENCSR794TLA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR794TLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR794TLA/full_ENCSR794TLA.counts.bigwig", "name": "ENCSR794TLA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR794TLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR794TLA/full_ENCSR794TLA.profile.bigwig", "name": "ENCSR794TLA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR794TLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-12 subunit alpha for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-18 for 72 hours", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR736VVP/preprocessing/bigWigs/ENCSR736VVP.bigWig", "name": "ENCSR736VVP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR736VVP" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell female adult (39 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR736VVP/ENCSR736VVP_w_bias.bw", "name": "ENCSR736VVP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR736VVP" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell female adult (39 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR736VVP/ENCSR736VVP_wo_bias.bw", "name": "ENCSR736VVP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR736VVP" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell female adult (39 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR736VVP/full_ENCSR736VVP.counts.bigwig", "name": "ENCSR736VVP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR736VVP" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell female adult (39 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR736VVP/full_ENCSR736VVP.profile.bigwig", "name": "ENCSR736VVP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR736VVP" ], "assay": "DNASE", "biosample summary": "Homo sapiens memory B cell female adult (39 years)", "biosample term name": "memory B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR343MCI/preprocessing/bigWigs/ENCSR343MCI.bigWig", "name": "ENCSR343MCI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR343MCI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR343MCI/ENCSR343MCI_w_bias.bw", "name": "ENCSR343MCI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR343MCI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR343MCI/ENCSR343MCI_wo_bias.bw", "name": "ENCSR343MCI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR343MCI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR343MCI/full_ENCSR343MCI.counts.bigwig", "name": "ENCSR343MCI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR343MCI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR343MCI/full_ENCSR343MCI.profile.bigwig", "name": "ENCSR343MCI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR343MCI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR146KFX/preprocessing/bigWigs/ENCSR146KFX.bigWig", "name": "ENCSR146KFX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR146KFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte", "biosample term name": "astrocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR146KFX/ENCSR146KFX_w_bias.bw", "name": "ENCSR146KFX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR146KFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte", "biosample term name": "astrocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR146KFX/ENCSR146KFX_wo_bias.bw", "name": "ENCSR146KFX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR146KFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte", "biosample term name": "astrocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR146KFX/full_ENCSR146KFX.counts.bigwig", "name": "ENCSR146KFX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR146KFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte", "biosample term name": "astrocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR146KFX/full_ENCSR146KFX.profile.bigwig", "name": "ENCSR146KFX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR146KFX" ], "assay": "DNASE", "biosample summary": "Homo sapiens astrocyte", "biosample term name": "astrocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR407WGG/preprocessing/bigWigs/ENCSR407WGG.bigWig", "name": "ENCSR407WGG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR407WGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR407WGG/ENCSR407WGG_w_bias.bw", "name": "ENCSR407WGG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR407WGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR407WGG/ENCSR407WGG_wo_bias.bw", "name": "ENCSR407WGG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR407WGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR407WGG/full_ENCSR407WGG.counts.bigwig", "name": "ENCSR407WGG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR407WGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR407WGG/full_ENCSR407WGG.profile.bigwig", "name": "ENCSR407WGG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR407WGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell female adult (41 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR658UBE/preprocessing/bigWigs/ENCSR658UBE.bigWig", "name": "ENCSR658UBE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR658UBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female child (16 years)", "biosample term name": "left lung", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658UBE/ENCSR658UBE_w_bias.bw", "name": "ENCSR658UBE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR658UBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female child (16 years)", "biosample term name": "left lung", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658UBE/ENCSR658UBE_wo_bias.bw", "name": "ENCSR658UBE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR658UBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female child (16 years)", "biosample term name": "left lung", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658UBE/full_ENCSR658UBE.counts.bigwig", "name": "ENCSR658UBE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR658UBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female child (16 years)", "biosample term name": "left lung", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658UBE/full_ENCSR658UBE.profile.bigwig", "name": "ENCSR658UBE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR658UBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female child (16 years)", "biosample term name": "left lung", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR037PIU/preprocessing/bigWigs/ENCSR037PIU.bigWig", "name": "ENCSR037PIU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR037PIU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (80 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PIU/ENCSR037PIU_w_bias.bw", "name": "ENCSR037PIU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR037PIU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (80 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PIU/ENCSR037PIU_wo_bias.bw", "name": "ENCSR037PIU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR037PIU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (80 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PIU/full_ENCSR037PIU.counts.bigwig", "name": "ENCSR037PIU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR037PIU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (80 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR037PIU/full_ENCSR037PIU.profile.bigwig", "name": "ENCSR037PIU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR037PIU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (80 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR879EVD/preprocessing/bigWigs/ENCSR879EVD.bigWig", "name": "ENCSR879EVD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR879EVD" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879EVD/ENCSR879EVD_w_bias.bw", "name": "ENCSR879EVD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR879EVD" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879EVD/ENCSR879EVD_wo_bias.bw", "name": "ENCSR879EVD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR879EVD" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879EVD/full_ENCSR879EVD.counts.bigwig", "name": "ENCSR879EVD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR879EVD" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879EVD/full_ENCSR879EVD.profile.bigwig", "name": "ENCSR879EVD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR879EVD" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (83 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR251INE/preprocessing/bigWigs/ENCSR251INE.bigWig", "name": "ENCSR251INE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR251INE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR251INE/ENCSR251INE_w_bias.bw", "name": "ENCSR251INE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR251INE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR251INE/ENCSR251INE_wo_bias.bw", "name": "ENCSR251INE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR251INE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR251INE/full_ENCSR251INE.counts.bigwig", "name": "ENCSR251INE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR251INE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR251INE/full_ENCSR251INE.profile.bigwig", "name": "ENCSR251INE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR251INE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR100OSB/preprocessing/bigWigs/ENCSR100OSB.bigWig", "name": "ENCSR100OSB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR100OSB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR100OSB/ENCSR100OSB_w_bias.bw", "name": "ENCSR100OSB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR100OSB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR100OSB/ENCSR100OSB_wo_bias.bw", "name": "ENCSR100OSB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR100OSB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR100OSB/full_ENCSR100OSB.counts.bigwig", "name": "ENCSR100OSB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR100OSB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR100OSB/full_ENCSR100OSB.profile.bigwig", "name": "ENCSR100OSB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR100OSB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR628GQE/preprocessing/bigWigs/ENCSR628GQE.bigWig", "name": "ENCSR628GQE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR628GQE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628GQE/ENCSR628GQE_w_bias.bw", "name": "ENCSR628GQE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628GQE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628GQE/ENCSR628GQE_wo_bias.bw", "name": "ENCSR628GQE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR628GQE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628GQE/full_ENCSR628GQE.counts.bigwig", "name": "ENCSR628GQE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628GQE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR628GQE/full_ENCSR628GQE.profile.bigwig", "name": "ENCSR628GQE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR628GQE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR604FER/preprocessing/bigWigs/ENCSR604FER.bigWig", "name": "ENCSR604FER observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR604FER" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR604FER/ENCSR604FER_w_bias.bw", "name": "ENCSR604FER DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR604FER" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR604FER/ENCSR604FER_wo_bias.bw", "name": "ENCSR604FER DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR604FER" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR604FER/full_ENCSR604FER.counts.bigwig", "name": "ENCSR604FER DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR604FER" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR604FER/full_ENCSR604FER.profile.bigwig", "name": "ENCSR604FER DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR604FER" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR570BWW/preprocessing/bigWigs/ENCSR570BWW.bigWig", "name": "ENCSR570BWW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR570BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR570BWW/ENCSR570BWW_w_bias.bw", "name": "ENCSR570BWW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR570BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR570BWW/ENCSR570BWW_wo_bias.bw", "name": "ENCSR570BWW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR570BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR570BWW/full_ENCSR570BWW.counts.bigwig", "name": "ENCSR570BWW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR570BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR570BWW/full_ENCSR570BWW.profile.bigwig", "name": "ENCSR570BWW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR570BWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR923JYH/preprocessing/bigWigs/ENCSR923JYH.bigWig", "name": "ENCSR923JYH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR923JYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (37 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923JYH/ENCSR923JYH_w_bias.bw", "name": "ENCSR923JYH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR923JYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (37 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923JYH/ENCSR923JYH_wo_bias.bw", "name": "ENCSR923JYH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR923JYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (37 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923JYH/full_ENCSR923JYH.counts.bigwig", "name": "ENCSR923JYH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR923JYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (37 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923JYH/full_ENCSR923JYH.profile.bigwig", "name": "ENCSR923JYH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR923JYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens transverse colon tissue male adult (37 years)", "biosample term name": "transverse colon", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR232NLA/preprocessing/bigWigs/ENCSR232NLA.bigWig", "name": "ENCSR232NLA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR232NLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (35 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR232NLA/ENCSR232NLA_w_bias.bw", "name": "ENCSR232NLA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR232NLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (35 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR232NLA/ENCSR232NLA_wo_bias.bw", "name": "ENCSR232NLA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR232NLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (35 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR232NLA/full_ENCSR232NLA.counts.bigwig", "name": "ENCSR232NLA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR232NLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (35 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR232NLA/full_ENCSR232NLA.profile.bigwig", "name": "ENCSR232NLA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR232NLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (35 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR563CZB/preprocessing/bigWigs/ENCSR563CZB.bigWig", "name": "ENCSR563CZB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR563CZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563CZB/ENCSR563CZB_w_bias.bw", "name": "ENCSR563CZB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR563CZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563CZB/ENCSR563CZB_wo_bias.bw", "name": "ENCSR563CZB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR563CZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563CZB/full_ENCSR563CZB.counts.bigwig", "name": "ENCSR563CZB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR563CZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563CZB/full_ENCSR563CZB.profile.bigwig", "name": "ENCSR563CZB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR563CZB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR223XND/preprocessing/bigWigs/ENCSR223XND.bigWig", "name": "ENCSR223XND observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR223XND" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223XND/ENCSR223XND_w_bias.bw", "name": "ENCSR223XND DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR223XND" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223XND/ENCSR223XND_wo_bias.bw", "name": "ENCSR223XND DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR223XND" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223XND/full_ENCSR223XND.counts.bigwig", "name": "ENCSR223XND DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR223XND" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR223XND/full_ENCSR223XND.profile.bigwig", "name": "ENCSR223XND DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR223XND" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR635VQU/preprocessing/bigWigs/ENCSR635VQU.bigWig", "name": "ENCSR635VQU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR635VQU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-4 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635VQU/ENCSR635VQU_w_bias.bw", "name": "ENCSR635VQU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635VQU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-4 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635VQU/ENCSR635VQU_wo_bias.bw", "name": "ENCSR635VQU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635VQU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-4 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635VQU/full_ENCSR635VQU.counts.bigwig", "name": "ENCSR635VQU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635VQU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-4 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635VQU/full_ENCSR635VQU.profile.bigwig", "name": "ENCSR635VQU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635VQU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-4 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR445QDZ/preprocessing/bigWigs/ENCSR445QDZ.bigWig", "name": "ENCSR445QDZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR445QDZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR445QDZ/ENCSR445QDZ_w_bias.bw", "name": "ENCSR445QDZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR445QDZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR445QDZ/ENCSR445QDZ_wo_bias.bw", "name": "ENCSR445QDZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR445QDZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR445QDZ/full_ENCSR445QDZ.counts.bigwig", "name": "ENCSR445QDZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR445QDZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR445QDZ/full_ENCSR445QDZ.profile.bigwig", "name": "ENCSR445QDZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR445QDZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (36 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR108PUO/preprocessing/bigWigs/ENCSR108PUO.bigWig", "name": "ENCSR108PUO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR108PUO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108PUO/ENCSR108PUO_w_bias.bw", "name": "ENCSR108PUO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR108PUO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108PUO/ENCSR108PUO_wo_bias.bw", "name": "ENCSR108PUO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR108PUO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108PUO/full_ENCSR108PUO.counts.bigwig", "name": "ENCSR108PUO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR108PUO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR108PUO/full_ENCSR108PUO.profile.bigwig", "name": "ENCSR108PUO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR108PUO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM23338", "biosample term name": "GM23338", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR832IQN/preprocessing/bigWigs/ENCSR832IQN.bigWig", "name": "ENCSR832IQN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR832IQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832IQN/ENCSR832IQN_w_bias.bw", "name": "ENCSR832IQN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR832IQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832IQN/ENCSR832IQN_wo_bias.bw", "name": "ENCSR832IQN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR832IQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832IQN/full_ENCSR832IQN.counts.bigwig", "name": "ENCSR832IQN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR832IQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832IQN/full_ENCSR832IQN.profile.bigwig", "name": "ENCSR832IQN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR832IQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR386BOX/preprocessing/bigWigs/ENCSR386BOX.bigWig", "name": "ENCSR386BOX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR386BOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386BOX/ENCSR386BOX_w_bias.bw", "name": "ENCSR386BOX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR386BOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386BOX/ENCSR386BOX_wo_bias.bw", "name": "ENCSR386BOX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR386BOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386BOX/full_ENCSR386BOX.counts.bigwig", "name": "ENCSR386BOX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR386BOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386BOX/full_ENCSR386BOX.profile.bigwig", "name": "ENCSR386BOX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR386BOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (48 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR428ZCP/preprocessing/bigWigs/ENCSR428ZCP.bigWig", "name": "ENCSR428ZCP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR428ZCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR428ZCP/ENCSR428ZCP_w_bias.bw", "name": "ENCSR428ZCP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR428ZCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR428ZCP/ENCSR428ZCP_wo_bias.bw", "name": "ENCSR428ZCP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR428ZCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR428ZCP/full_ENCSR428ZCP.counts.bigwig", "name": "ENCSR428ZCP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR428ZCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR428ZCP/full_ENCSR428ZCP.profile.bigwig", "name": "ENCSR428ZCP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR428ZCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR515PDV/preprocessing/bigWigs/ENCSR515PDV.bigWig", "name": "ENCSR515PDV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR515PDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515PDV/ENCSR515PDV_w_bias.bw", "name": "ENCSR515PDV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515PDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515PDV/ENCSR515PDV_wo_bias.bw", "name": "ENCSR515PDV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515PDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515PDV/full_ENCSR515PDV.counts.bigwig", "name": "ENCSR515PDV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515PDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515PDV/full_ENCSR515PDV.profile.bigwig", "name": "ENCSR515PDV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515PDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR895TUV/preprocessing/bigWigs/ENCSR895TUV.bigWig", "name": "ENCSR895TUV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR895TUV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895TUV/ENCSR895TUV_w_bias.bw", "name": "ENCSR895TUV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895TUV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895TUV/ENCSR895TUV_wo_bias.bw", "name": "ENCSR895TUV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR895TUV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895TUV/full_ENCSR895TUV.counts.bigwig", "name": "ENCSR895TUV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895TUV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR895TUV/full_ENCSR895TUV.profile.bigwig", "name": "ENCSR895TUV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR895TUV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR645HET/preprocessing/bigWigs/ENCSR645HET.bigWig", "name": "ENCSR645HET observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR645HET" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR645HET/ENCSR645HET_w_bias.bw", "name": "ENCSR645HET DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR645HET" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR645HET/ENCSR645HET_wo_bias.bw", "name": "ENCSR645HET DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR645HET" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR645HET/full_ENCSR645HET.counts.bigwig", "name": "ENCSR645HET DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR645HET" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR645HET/full_ENCSR645HET.profile.bigwig", "name": "ENCSR645HET DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR645HET" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR311EEL/preprocessing/bigWigs/ENCSR311EEL.bigWig", "name": "ENCSR311EEL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR311EEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR311EEL/ENCSR311EEL_w_bias.bw", "name": "ENCSR311EEL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR311EEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR311EEL/ENCSR311EEL_wo_bias.bw", "name": "ENCSR311EEL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR311EEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR311EEL/full_ENCSR311EEL.counts.bigwig", "name": "ENCSR311EEL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR311EEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR311EEL/full_ENCSR311EEL.profile.bigwig", "name": "ENCSR311EEL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR311EEL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR846VGZ/preprocessing/bigWigs/ENCSR846VGZ.bigWig", "name": "ENCSR846VGZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR846VGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR846VGZ/ENCSR846VGZ_w_bias.bw", "name": "ENCSR846VGZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846VGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR846VGZ/ENCSR846VGZ_wo_bias.bw", "name": "ENCSR846VGZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR846VGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR846VGZ/full_ENCSR846VGZ.counts.bigwig", "name": "ENCSR846VGZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846VGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR846VGZ/full_ENCSR846VGZ.profile.bigwig", "name": "ENCSR846VGZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR846VGZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR928WMU/preprocessing/bigWigs/ENCSR928WMU.bigWig", "name": "ENCSR928WMU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR928WMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928WMU/ENCSR928WMU_w_bias.bw", "name": "ENCSR928WMU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR928WMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928WMU/ENCSR928WMU_wo_bias.bw", "name": "ENCSR928WMU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR928WMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928WMU/full_ENCSR928WMU.counts.bigwig", "name": "ENCSR928WMU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR928WMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928WMU/full_ENCSR928WMU.profile.bigwig", "name": "ENCSR928WMU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR928WMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (66 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR809LCE/preprocessing/bigWigs/ENCSR809LCE.bigWig", "name": "ENCSR809LCE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR809LCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (23 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR809LCE/ENCSR809LCE_w_bias.bw", "name": "ENCSR809LCE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR809LCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (23 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR809LCE/ENCSR809LCE_wo_bias.bw", "name": "ENCSR809LCE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR809LCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (23 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR809LCE/full_ENCSR809LCE.counts.bigwig", "name": "ENCSR809LCE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR809LCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (23 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR809LCE/full_ENCSR809LCE.profile.bigwig", "name": "ENCSR809LCE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR809LCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens trophoblast cell embryo (23 weeks)", "biosample term name": "trophoblast cell", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR518WRP/preprocessing/bigWigs/ENCSR518WRP.bigWig", "name": "ENCSR518WRP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR518WRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518WRP/ENCSR518WRP_w_bias.bw", "name": "ENCSR518WRP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR518WRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518WRP/ENCSR518WRP_wo_bias.bw", "name": "ENCSR518WRP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR518WRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518WRP/full_ENCSR518WRP.counts.bigwig", "name": "ENCSR518WRP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR518WRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518WRP/full_ENCSR518WRP.profile.bigwig", "name": "ENCSR518WRP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR518WRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (78 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR234VLI/preprocessing/bigWigs/ENCSR234VLI.bigWig", "name": "ENCSR234VLI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR234VLI" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR234VLI/ENCSR234VLI_w_bias.bw", "name": "ENCSR234VLI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR234VLI" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR234VLI/ENCSR234VLI_wo_bias.bw", "name": "ENCSR234VLI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR234VLI" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR234VLI/full_ENCSR234VLI.counts.bigwig", "name": "ENCSR234VLI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR234VLI" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR234VLI/full_ENCSR234VLI.profile.bigwig", "name": "ENCSR234VLI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR234VLI" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR814DYF/preprocessing/bigWigs/ENCSR814DYF.bigWig", "name": "ENCSR814DYF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR814DYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814DYF/ENCSR814DYF_w_bias.bw", "name": "ENCSR814DYF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR814DYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814DYF/ENCSR814DYF_wo_bias.bw", "name": "ENCSR814DYF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR814DYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814DYF/full_ENCSR814DYF.counts.bigwig", "name": "ENCSR814DYF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR814DYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR814DYF/full_ENCSR814DYF.profile.bigwig", "name": "ENCSR814DYF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR814DYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR060MJY/preprocessing/bigWigs/ENCSR060MJY.bigWig", "name": "ENCSR060MJY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR060MJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060MJY/ENCSR060MJY_w_bias.bw", "name": "ENCSR060MJY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060MJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060MJY/ENCSR060MJY_wo_bias.bw", "name": "ENCSR060MJY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060MJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060MJY/full_ENCSR060MJY.counts.bigwig", "name": "ENCSR060MJY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060MJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060MJY/full_ENCSR060MJY.profile.bigwig", "name": "ENCSR060MJY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060MJY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR113DHB/preprocessing/bigWigs/ENCSR113DHB.bigWig", "name": "ENCSR113DHB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR113DHB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR113DHB/ENCSR113DHB_w_bias.bw", "name": "ENCSR113DHB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR113DHB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR113DHB/ENCSR113DHB_wo_bias.bw", "name": "ENCSR113DHB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR113DHB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR113DHB/full_ENCSR113DHB.counts.bigwig", "name": "ENCSR113DHB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR113DHB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR113DHB/full_ENCSR113DHB.profile.bigwig", "name": "ENCSR113DHB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR113DHB" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR593OUE/preprocessing/bigWigs/ENCSR593OUE.bigWig", "name": "ENCSR593OUE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR593OUE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593OUE/ENCSR593OUE_w_bias.bw", "name": "ENCSR593OUE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR593OUE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593OUE/ENCSR593OUE_wo_bias.bw", "name": "ENCSR593OUE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR593OUE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593OUE/full_ENCSR593OUE.counts.bigwig", "name": "ENCSR593OUE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR593OUE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR593OUE/full_ENCSR593OUE.profile.bigwig", "name": "ENCSR593OUE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR593OUE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR258POP/preprocessing/bigWigs/ENCSR258POP.bigWig", "name": "ENCSR258POP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR258POP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258POP/ENCSR258POP_w_bias.bw", "name": "ENCSR258POP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258POP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258POP/ENCSR258POP_wo_bias.bw", "name": "ENCSR258POP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258POP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258POP/full_ENCSR258POP.counts.bigwig", "name": "ENCSR258POP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258POP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258POP/full_ENCSR258POP.profile.bigwig", "name": "ENCSR258POP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258POP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR022UVL/preprocessing/bigWigs/ENCSR022UVL.bigWig", "name": "ENCSR022UVL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR022UVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022UVL/ENCSR022UVL_w_bias.bw", "name": "ENCSR022UVL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR022UVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022UVL/ENCSR022UVL_wo_bias.bw", "name": "ENCSR022UVL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR022UVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022UVL/full_ENCSR022UVL.counts.bigwig", "name": "ENCSR022UVL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR022UVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022UVL/full_ENCSR022UVL.profile.bigwig", "name": "ENCSR022UVL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR022UVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR114XWV/preprocessing/bigWigs/ENCSR114XWV.bigWig", "name": "ENCSR114XWV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR114XWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR114XWV/ENCSR114XWV_w_bias.bw", "name": "ENCSR114XWV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR114XWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR114XWV/ENCSR114XWV_wo_bias.bw", "name": "ENCSR114XWV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR114XWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR114XWV/full_ENCSR114XWV.counts.bigwig", "name": "ENCSR114XWV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR114XWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR114XWV/full_ENCSR114XWV.profile.bigwig", "name": "ENCSR114XWV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR114XWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR662IRS/preprocessing/bigWigs/ENCSR662IRS.bigWig", "name": "ENCSR662IRS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR662IRS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662IRS/ENCSR662IRS_w_bias.bw", "name": "ENCSR662IRS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR662IRS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662IRS/ENCSR662IRS_wo_bias.bw", "name": "ENCSR662IRS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR662IRS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662IRS/full_ENCSR662IRS.counts.bigwig", "name": "ENCSR662IRS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR662IRS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662IRS/full_ENCSR662IRS.profile.bigwig", "name": "ENCSR662IRS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR662IRS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR386XPD/preprocessing/bigWigs/ENCSR386XPD.bigWig", "name": "ENCSR386XPD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR386XPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386XPD/ENCSR386XPD_w_bias.bw", "name": "ENCSR386XPD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR386XPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386XPD/ENCSR386XPD_wo_bias.bw", "name": "ENCSR386XPD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR386XPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386XPD/full_ENCSR386XPD.counts.bigwig", "name": "ENCSR386XPD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR386XPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR386XPD/full_ENCSR386XPD.profile.bigwig", "name": "ENCSR386XPD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR386XPD" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR365FVU/preprocessing/bigWigs/ENCSR365FVU.bigWig", "name": "ENCSR365FVU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR365FVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (78 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365FVU/ENCSR365FVU_w_bias.bw", "name": "ENCSR365FVU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR365FVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (78 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365FVU/ENCSR365FVU_wo_bias.bw", "name": "ENCSR365FVU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR365FVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (78 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365FVU/full_ENCSR365FVU.counts.bigwig", "name": "ENCSR365FVU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR365FVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (78 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR365FVU/full_ENCSR365FVU.profile.bigwig", "name": "ENCSR365FVU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR365FVU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (78 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR367WVH/preprocessing/bigWigs/ENCSR367WVH.bigWig", "name": "ENCSR367WVH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR367WVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR367WVH/ENCSR367WVH_w_bias.bw", "name": "ENCSR367WVH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR367WVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR367WVH/ENCSR367WVH_wo_bias.bw", "name": "ENCSR367WVH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR367WVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR367WVH/full_ENCSR367WVH.counts.bigwig", "name": "ENCSR367WVH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR367WVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR367WVH/full_ENCSR367WVH.profile.bigwig", "name": "ENCSR367WVH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR367WVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMQ/preprocessing/bigWigs/ENCSR000EMQ.bigWig", "name": "ENCSR000EMQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM06990", "biosample term name": "GM06990", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMQ/ENCSR000EMQ_w_bias.bw", "name": "ENCSR000EMQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM06990", "biosample term name": "GM06990", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMQ/ENCSR000EMQ_wo_bias.bw", "name": "ENCSR000EMQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM06990", "biosample term name": "GM06990", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMQ/full_ENCSR000EMQ.counts.bigwig", "name": "ENCSR000EMQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM06990", "biosample term name": "GM06990", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMQ/full_ENCSR000EMQ.profile.bigwig", "name": "ENCSR000EMQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM06990", "biosample term name": "GM06990", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR516RTV/preprocessing/bigWigs/ENCSR516RTV.bigWig", "name": "ENCSR516RTV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR516RTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516RTV/ENCSR516RTV_w_bias.bw", "name": "ENCSR516RTV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR516RTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516RTV/ENCSR516RTV_wo_bias.bw", "name": "ENCSR516RTV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR516RTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516RTV/full_ENCSR516RTV.counts.bigwig", "name": "ENCSR516RTV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR516RTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516RTV/full_ENCSR516RTV.profile.bigwig", "name": "ENCSR516RTV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR516RTV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR144NXI/preprocessing/bigWigs/ENCSR144NXI.bigWig", "name": "ENCSR144NXI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR144NXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR144NXI/ENCSR144NXI_w_bias.bw", "name": "ENCSR144NXI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR144NXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR144NXI/ENCSR144NXI_wo_bias.bw", "name": "ENCSR144NXI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR144NXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR144NXI/full_ENCSR144NXI.counts.bigwig", "name": "ENCSR144NXI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR144NXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR144NXI/full_ENCSR144NXI.profile.bigwig", "name": "ENCSR144NXI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR144NXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR780ABS/preprocessing/bigWigs/ENCSR780ABS.bigWig", "name": "ENCSR780ABS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR780ABS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, anti-CD3 and anti-CD28 coated beads for 24 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "activated T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR780ABS/ENCSR780ABS_w_bias.bw", "name": "ENCSR780ABS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR780ABS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, anti-CD3 and anti-CD28 coated beads for 24 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "activated T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR780ABS/ENCSR780ABS_wo_bias.bw", "name": "ENCSR780ABS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR780ABS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, anti-CD3 and anti-CD28 coated beads for 24 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "activated T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR780ABS/full_ENCSR780ABS.counts.bigwig", "name": "ENCSR780ABS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR780ABS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, anti-CD3 and anti-CD28 coated beads for 24 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "activated T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR780ABS/full_ENCSR780ABS.profile.bigwig", "name": "ENCSR780ABS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR780ABS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-helper 2 cell male adult (35 years) treated with 5 \u03bcg/mL Interferon-gamma antibody for 36 hours, anti-CD3 and anti-CD28 coated beads for 24 hours, 10 ng/mL Interleukin-2 for 14 days, anti-CD3 and anti-CD28 coated beads for 14 days, 100 ng/mL Interleukin-4 for 36 hours", "biosample term name": "activated T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR173YSO/preprocessing/bigWigs/ENCSR173YSO.bigWig", "name": "ENCSR173YSO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR173YSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (79 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173YSO/ENCSR173YSO_w_bias.bw", "name": "ENCSR173YSO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR173YSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (79 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173YSO/ENCSR173YSO_wo_bias.bw", "name": "ENCSR173YSO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR173YSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (79 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173YSO/full_ENCSR173YSO.counts.bigwig", "name": "ENCSR173YSO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR173YSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (79 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173YSO/full_ENCSR173YSO.profile.bigwig", "name": "ENCSR173YSO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR173YSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (79 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR984SDD/preprocessing/bigWigs/ENCSR984SDD.bigWig", "name": "ENCSR984SDD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR984SDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SDD/ENCSR984SDD_w_bias.bw", "name": "ENCSR984SDD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984SDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SDD/ENCSR984SDD_wo_bias.bw", "name": "ENCSR984SDD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984SDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SDD/full_ENCSR984SDD.counts.bigwig", "name": "ENCSR984SDD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984SDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984SDD/full_ENCSR984SDD.profile.bigwig", "name": "ENCSR984SDD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984SDD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR599JZA/preprocessing/bigWigs/ENCSR599JZA.bigWig", "name": "ENCSR599JZA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR599JZA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (86 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR599JZA/ENCSR599JZA_w_bias.bw", "name": "ENCSR599JZA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR599JZA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (86 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR599JZA/ENCSR599JZA_wo_bias.bw", "name": "ENCSR599JZA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR599JZA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (86 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR599JZA/full_ENCSR599JZA.counts.bigwig", "name": "ENCSR599JZA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR599JZA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (86 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR599JZA/full_ENCSR599JZA.profile.bigwig", "name": "ENCSR599JZA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR599JZA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (86 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR796YOJ/preprocessing/bigWigs/ENCSR796YOJ.bigWig", "name": "ENCSR796YOJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR796YOJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796YOJ/ENCSR796YOJ_w_bias.bw", "name": "ENCSR796YOJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR796YOJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796YOJ/ENCSR796YOJ_wo_bias.bw", "name": "ENCSR796YOJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR796YOJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796YOJ/full_ENCSR796YOJ.counts.bigwig", "name": "ENCSR796YOJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR796YOJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796YOJ/full_ENCSR796YOJ.profile.bigwig", "name": "ENCSR796YOJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR796YOJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR176BPJ/preprocessing/bigWigs/ENCSR176BPJ.bigWig", "name": "ENCSR176BPJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR176BPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176BPJ/ENCSR176BPJ_w_bias.bw", "name": "ENCSR176BPJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR176BPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176BPJ/ENCSR176BPJ_wo_bias.bw", "name": "ENCSR176BPJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR176BPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176BPJ/full_ENCSR176BPJ.counts.bigwig", "name": "ENCSR176BPJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR176BPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176BPJ/full_ENCSR176BPJ.profile.bigwig", "name": "ENCSR176BPJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR176BPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR085MZL/preprocessing/bigWigs/ENCSR085MZL.bigWig", "name": "ENCSR085MZL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR085MZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085MZL/ENCSR085MZL_w_bias.bw", "name": "ENCSR085MZL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR085MZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085MZL/ENCSR085MZL_wo_bias.bw", "name": "ENCSR085MZL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR085MZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium inferior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085MZL/full_ENCSR085MZL.counts.bigwig", "name": "ENCSR085MZL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR085MZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium inferior", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR085MZL/full_ENCSR085MZL.profile.bigwig", "name": "ENCSR085MZL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR085MZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens Right ventricle myocardium inferior tissue male adult (60 years)", "biosample term name": "Right ventricle myocardium inferior", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR950YTI/preprocessing/bigWigs/ENCSR950YTI.bigWig", "name": "ENCSR950YTI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR950YTI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR950YTI/ENCSR950YTI_w_bias.bw", "name": "ENCSR950YTI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR950YTI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR950YTI/ENCSR950YTI_wo_bias.bw", "name": "ENCSR950YTI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR950YTI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR950YTI/full_ENCSR950YTI.counts.bigwig", "name": "ENCSR950YTI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR950YTI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR950YTI/full_ENCSR950YTI.profile.bigwig", "name": "ENCSR950YTI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR950YTI" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR242CLA/preprocessing/bigWigs/ENCSR242CLA.bigWig", "name": "ENCSR242CLA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR242CLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242CLA/ENCSR242CLA_w_bias.bw", "name": "ENCSR242CLA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR242CLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242CLA/ENCSR242CLA_wo_bias.bw", "name": "ENCSR242CLA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR242CLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242CLA/full_ENCSR242CLA.counts.bigwig", "name": "ENCSR242CLA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR242CLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR242CLA/full_ENCSR242CLA.profile.bigwig", "name": "ENCSR242CLA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR242CLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR606QDB/preprocessing/bigWigs/ENCSR606QDB.bigWig", "name": "ENCSR606QDB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR606QDB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR606QDB/ENCSR606QDB_w_bias.bw", "name": "ENCSR606QDB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR606QDB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR606QDB/ENCSR606QDB_wo_bias.bw", "name": "ENCSR606QDB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR606QDB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR606QDB/full_ENCSR606QDB.counts.bigwig", "name": "ENCSR606QDB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR606QDB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR606QDB/full_ENCSR606QDB.profile.bigwig", "name": "ENCSR606QDB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR606QDB" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR686LOE/preprocessing/bigWigs/ENCSR686LOE.bigWig", "name": "ENCSR686LOE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR686LOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR686LOE/ENCSR686LOE_w_bias.bw", "name": "ENCSR686LOE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR686LOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR686LOE/ENCSR686LOE_wo_bias.bw", "name": "ENCSR686LOE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR686LOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR686LOE/full_ENCSR686LOE.counts.bigwig", "name": "ENCSR686LOE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR686LOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR686LOE/full_ENCSR686LOE.profile.bigwig", "name": "ENCSR686LOE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR686LOE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (89 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR246VSO/preprocessing/bigWigs/ENCSR246VSO.bigWig", "name": "ENCSR246VSO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR246VSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR246VSO/ENCSR246VSO_w_bias.bw", "name": "ENCSR246VSO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR246VSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR246VSO/ENCSR246VSO_wo_bias.bw", "name": "ENCSR246VSO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR246VSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR246VSO/full_ENCSR246VSO.counts.bigwig", "name": "ENCSR246VSO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR246VSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR246VSO/full_ENCSR246VSO.profile.bigwig", "name": "ENCSR246VSO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR246VSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue female adult (56 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR516JCM/preprocessing/bigWigs/ENCSR516JCM.bigWig", "name": "ENCSR516JCM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR516JCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516JCM/ENCSR516JCM_w_bias.bw", "name": "ENCSR516JCM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR516JCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516JCM/ENCSR516JCM_wo_bias.bw", "name": "ENCSR516JCM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR516JCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516JCM/full_ENCSR516JCM.counts.bigwig", "name": "ENCSR516JCM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR516JCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR516JCM/full_ENCSR516JCM.profile.bigwig", "name": "ENCSR516JCM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR516JCM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR729TYE/preprocessing/bigWigs/ENCSR729TYE.bigWig", "name": "ENCSR729TYE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR729TYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR729TYE/ENCSR729TYE_w_bias.bw", "name": "ENCSR729TYE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR729TYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR729TYE/ENCSR729TYE_wo_bias.bw", "name": "ENCSR729TYE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR729TYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR729TYE/full_ENCSR729TYE.counts.bigwig", "name": "ENCSR729TYE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR729TYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR729TYE/full_ENCSR729TYE.profile.bigwig", "name": "ENCSR729TYE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR729TYE" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR152FWD/preprocessing/bigWigs/ENCSR152FWD.bigWig", "name": "ENCSR152FWD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR152FWD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-15 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152FWD/ENCSR152FWD_w_bias.bw", "name": "ENCSR152FWD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR152FWD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-15 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152FWD/ENCSR152FWD_wo_bias.bw", "name": "ENCSR152FWD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR152FWD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-15 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152FWD/full_ENCSR152FWD.counts.bigwig", "name": "ENCSR152FWD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR152FWD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-15 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152FWD/full_ENCSR152FWD.profile.bigwig", "name": "ENCSR152FWD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR152FWD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (39 years) treated with Interleukin-15 for 4 hours", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR819GAF/preprocessing/bigWigs/ENCSR819GAF.bigWig", "name": "ENCSR819GAF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR819GAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR819GAF/ENCSR819GAF_w_bias.bw", "name": "ENCSR819GAF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR819GAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR819GAF/ENCSR819GAF_wo_bias.bw", "name": "ENCSR819GAF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR819GAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR819GAF/full_ENCSR819GAF.counts.bigwig", "name": "ENCSR819GAF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR819GAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR819GAF/full_ENCSR819GAF.profile.bigwig", "name": "ENCSR819GAF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR819GAF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR785MXI/preprocessing/bigWigs/ENCSR785MXI.bigWig", "name": "ENCSR785MXI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR785MXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785MXI/ENCSR785MXI_w_bias.bw", "name": "ENCSR785MXI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR785MXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785MXI/ENCSR785MXI_wo_bias.bw", "name": "ENCSR785MXI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR785MXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785MXI/full_ENCSR785MXI.counts.bigwig", "name": "ENCSR785MXI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR785MXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR785MXI/full_ENCSR785MXI.profile.bigwig", "name": "ENCSR785MXI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR785MXI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (88 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR195GUK/preprocessing/bigWigs/ENCSR195GUK.bigWig", "name": "ENCSR195GUK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR195GUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195GUK/ENCSR195GUK_w_bias.bw", "name": "ENCSR195GUK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR195GUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195GUK/ENCSR195GUK_wo_bias.bw", "name": "ENCSR195GUK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR195GUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195GUK/full_ENCSR195GUK.counts.bigwig", "name": "ENCSR195GUK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR195GUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR195GUK/full_ENCSR195GUK.profile.bigwig", "name": "ENCSR195GUK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR195GUK" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (82 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR498FCF/preprocessing/bigWigs/ENCSR498FCF.bigWig", "name": "ENCSR498FCF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR498FCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498FCF/ENCSR498FCF_w_bias.bw", "name": "ENCSR498FCF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR498FCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498FCF/ENCSR498FCF_wo_bias.bw", "name": "ENCSR498FCF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR498FCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498FCF/full_ENCSR498FCF.counts.bigwig", "name": "ENCSR498FCF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR498FCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR498FCF/full_ENCSR498FCF.profile.bigwig", "name": "ENCSR498FCF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR498FCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR612IKQ/preprocessing/bigWigs/ENCSR612IKQ.bigWig", "name": "ENCSR612IKQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR612IKQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612IKQ/ENCSR612IKQ_w_bias.bw", "name": "ENCSR612IKQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR612IKQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612IKQ/ENCSR612IKQ_wo_bias.bw", "name": "ENCSR612IKQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR612IKQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612IKQ/full_ENCSR612IKQ.counts.bigwig", "name": "ENCSR612IKQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR612IKQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR612IKQ/full_ENCSR612IKQ.profile.bigwig", "name": "ENCSR612IKQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR612IKQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue female adult (87 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR116UQH/preprocessing/bigWigs/ENCSR116UQH.bigWig", "name": "ENCSR116UQH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR116UQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116UQH/ENCSR116UQH_w_bias.bw", "name": "ENCSR116UQH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR116UQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116UQH/ENCSR116UQH_wo_bias.bw", "name": "ENCSR116UQH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR116UQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116UQH/full_ENCSR116UQH.counts.bigwig", "name": "ENCSR116UQH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR116UQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116UQH/full_ENCSR116UQH.profile.bigwig", "name": "ENCSR116UQH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR116UQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR511PFY/preprocessing/bigWigs/ENCSR511PFY.bigWig", "name": "ENCSR511PFY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR511PFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR511PFY/ENCSR511PFY_w_bias.bw", "name": "ENCSR511PFY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR511PFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR511PFY/ENCSR511PFY_wo_bias.bw", "name": "ENCSR511PFY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR511PFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR511PFY/full_ENCSR511PFY.counts.bigwig", "name": "ENCSR511PFY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR511PFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR511PFY/full_ENCSR511PFY.profile.bigwig", "name": "ENCSR511PFY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR511PFY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR924IHU/preprocessing/bigWigs/ENCSR924IHU.bigWig", "name": "ENCSR924IHU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR924IHU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (84 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR924IHU/ENCSR924IHU_w_bias.bw", "name": "ENCSR924IHU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR924IHU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (84 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR924IHU/ENCSR924IHU_wo_bias.bw", "name": "ENCSR924IHU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR924IHU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (84 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR924IHU/full_ENCSR924IHU.counts.bigwig", "name": "ENCSR924IHU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR924IHU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (84 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR924IHU/full_ENCSR924IHU.profile.bigwig", "name": "ENCSR924IHU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR924IHU" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (84 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR885ZBV/preprocessing/bigWigs/ENCSR885ZBV.bigWig", "name": "ENCSR885ZBV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR885ZBV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885ZBV/ENCSR885ZBV_w_bias.bw", "name": "ENCSR885ZBV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR885ZBV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885ZBV/ENCSR885ZBV_wo_bias.bw", "name": "ENCSR885ZBV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR885ZBV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885ZBV/full_ENCSR885ZBV.counts.bigwig", "name": "ENCSR885ZBV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR885ZBV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885ZBV/full_ENCSR885ZBV.profile.bigwig", "name": "ENCSR885ZBV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR885ZBV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR057GPV/preprocessing/bigWigs/ENCSR057GPV.bigWig", "name": "ENCSR057GPV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR057GPV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR057GPV/ENCSR057GPV_w_bias.bw", "name": "ENCSR057GPV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR057GPV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR057GPV/ENCSR057GPV_wo_bias.bw", "name": "ENCSR057GPV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR057GPV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR057GPV/full_ENCSR057GPV.counts.bigwig", "name": "ENCSR057GPV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR057GPV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR057GPV/full_ENCSR057GPV.profile.bigwig", "name": "ENCSR057GPV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR057GPV" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR303JDG/preprocessing/bigWigs/ENCSR303JDG.bigWig", "name": "ENCSR303JDG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR303JDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303JDG/ENCSR303JDG_w_bias.bw", "name": "ENCSR303JDG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR303JDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303JDG/ENCSR303JDG_wo_bias.bw", "name": "ENCSR303JDG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR303JDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303JDG/full_ENCSR303JDG.counts.bigwig", "name": "ENCSR303JDG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR303JDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303JDG/full_ENCSR303JDG.profile.bigwig", "name": "ENCSR303JDG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR303JDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (21 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR923BEY/preprocessing/bigWigs/ENCSR923BEY.bigWig", "name": "ENCSR923BEY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR923BEY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923BEY/ENCSR923BEY_w_bias.bw", "name": "ENCSR923BEY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR923BEY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923BEY/ENCSR923BEY_wo_bias.bw", "name": "ENCSR923BEY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR923BEY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923BEY/full_ENCSR923BEY.counts.bigwig", "name": "ENCSR923BEY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR923BEY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR923BEY/full_ENCSR923BEY.profile.bigwig", "name": "ENCSR923BEY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR923BEY" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR056PFI/preprocessing/bigWigs/ENCSR056PFI.bigWig", "name": "ENCSR056PFI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR056PFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue male adult (26 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR056PFI/ENCSR056PFI_w_bias.bw", "name": "ENCSR056PFI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR056PFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue male adult (26 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR056PFI/ENCSR056PFI_wo_bias.bw", "name": "ENCSR056PFI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR056PFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue male adult (26 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR056PFI/full_ENCSR056PFI.counts.bigwig", "name": "ENCSR056PFI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR056PFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue male adult (26 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR056PFI/full_ENCSR056PFI.profile.bigwig", "name": "ENCSR056PFI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR056PFI" ], "assay": "DNASE", "biosample summary": "Homo sapiens pancreas tissue male adult (26 years)", "biosample term name": "pancreas", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR849WGE/preprocessing/bigWigs/ENCSR849WGE.bigWig", "name": "ENCSR849WGE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR849WGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (84 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849WGE/ENCSR849WGE_w_bias.bw", "name": "ENCSR849WGE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR849WGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (84 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849WGE/ENCSR849WGE_wo_bias.bw", "name": "ENCSR849WGE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR849WGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (84 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849WGE/full_ENCSR849WGE.counts.bigwig", "name": "ENCSR849WGE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR849WGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (84 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR849WGE/full_ENCSR849WGE.profile.bigwig", "name": "ENCSR849WGE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR849WGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (84 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR800MBE/preprocessing/bigWigs/ENCSR800MBE.bigWig", "name": "ENCSR800MBE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR800MBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800MBE/ENCSR800MBE_w_bias.bw", "name": "ENCSR800MBE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR800MBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800MBE/ENCSR800MBE_wo_bias.bw", "name": "ENCSR800MBE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR800MBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800MBE/full_ENCSR800MBE.counts.bigwig", "name": "ENCSR800MBE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR800MBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR800MBE/full_ENCSR800MBE.profile.bigwig", "name": "ENCSR800MBE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR800MBE" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (82 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR739VKY/preprocessing/bigWigs/ENCSR739VKY.bigWig", "name": "ENCSR739VKY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR739VKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR739VKY/ENCSR739VKY_w_bias.bw", "name": "ENCSR739VKY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR739VKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR739VKY/ENCSR739VKY_wo_bias.bw", "name": "ENCSR739VKY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR739VKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR739VKY/full_ENCSR739VKY.counts.bigwig", "name": "ENCSR739VKY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR739VKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR739VKY/full_ENCSR739VKY.profile.bigwig", "name": "ENCSR739VKY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR739VKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell female adult (39 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPI/preprocessing/bigWigs/ENCSR000EPI.bigWig", "name": "ENCSR000EPI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7 treated with 100 nM estradiol for 1 hour", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPI/ENCSR000EPI_w_bias.bw", "name": "ENCSR000EPI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7 treated with 100 nM estradiol for 1 hour", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPI/ENCSR000EPI_wo_bias.bw", "name": "ENCSR000EPI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7 treated with 100 nM estradiol for 1 hour", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPI/full_ENCSR000EPI.counts.bigwig", "name": "ENCSR000EPI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7 treated with 100 nM estradiol for 1 hour", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPI/full_ENCSR000EPI.profile.bigwig", "name": "ENCSR000EPI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPI" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7 treated with 100 nM estradiol for 1 hour", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR637ZLM/preprocessing/bigWigs/ENCSR637ZLM.bigWig", "name": "ENCSR637ZLM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR637ZLM" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR637ZLM/ENCSR637ZLM_w_bias.bw", "name": "ENCSR637ZLM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR637ZLM" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR637ZLM/ENCSR637ZLM_wo_bias.bw", "name": "ENCSR637ZLM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR637ZLM" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR637ZLM/full_ENCSR637ZLM.counts.bigwig", "name": "ENCSR637ZLM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR637ZLM" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR637ZLM/full_ENCSR637ZLM.profile.bigwig", "name": "ENCSR637ZLM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR637ZLM" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR503UFM/preprocessing/bigWigs/ENCSR503UFM.bigWig", "name": "ENCSR503UFM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR503UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (77 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503UFM/ENCSR503UFM_w_bias.bw", "name": "ENCSR503UFM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR503UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (77 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503UFM/ENCSR503UFM_wo_bias.bw", "name": "ENCSR503UFM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR503UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (77 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503UFM/full_ENCSR503UFM.counts.bigwig", "name": "ENCSR503UFM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR503UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (77 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR503UFM/full_ENCSR503UFM.profile.bigwig", "name": "ENCSR503UFM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR503UFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (77 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR943MRO/preprocessing/bigWigs/ENCSR943MRO.bigWig", "name": "ENCSR943MRO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR943MRO" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943MRO/ENCSR943MRO_w_bias.bw", "name": "ENCSR943MRO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943MRO" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943MRO/ENCSR943MRO_wo_bias.bw", "name": "ENCSR943MRO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943MRO" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943MRO/full_ENCSR943MRO.counts.bigwig", "name": "ENCSR943MRO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943MRO" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943MRO/full_ENCSR943MRO.profile.bigwig", "name": "ENCSR943MRO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943MRO" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (85 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR617SVO/preprocessing/bigWigs/ENCSR617SVO.bigWig", "name": "ENCSR617SVO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR617SVO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617SVO/ENCSR617SVO_w_bias.bw", "name": "ENCSR617SVO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR617SVO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617SVO/ENCSR617SVO_wo_bias.bw", "name": "ENCSR617SVO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR617SVO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617SVO/full_ENCSR617SVO.counts.bigwig", "name": "ENCSR617SVO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR617SVO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617SVO/full_ENCSR617SVO.profile.bigwig", "name": "ENCSR617SVO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR617SVO" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR797FIM/preprocessing/bigWigs/ENCSR797FIM.bigWig", "name": "ENCSR797FIM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR797FIM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR797FIM/ENCSR797FIM_w_bias.bw", "name": "ENCSR797FIM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR797FIM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR797FIM/ENCSR797FIM_wo_bias.bw", "name": "ENCSR797FIM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR797FIM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR797FIM/full_ENCSR797FIM.counts.bigwig", "name": "ENCSR797FIM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR797FIM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR797FIM/full_ENCSR797FIM.profile.bigwig", "name": "ENCSR797FIM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR797FIM" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR238FMP/preprocessing/bigWigs/ENCSR238FMP.bigWig", "name": "ENCSR238FMP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR238FMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (40 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR238FMP/ENCSR238FMP_w_bias.bw", "name": "ENCSR238FMP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR238FMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (40 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR238FMP/ENCSR238FMP_wo_bias.bw", "name": "ENCSR238FMP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR238FMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (40 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR238FMP/full_ENCSR238FMP.counts.bigwig", "name": "ENCSR238FMP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR238FMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (40 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR238FMP/full_ENCSR238FMP.profile.bigwig", "name": "ENCSR238FMP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR238FMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart right ventricle tissue male adult (40 years)", "biosample term name": "heart right ventricle", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR271QID/preprocessing/bigWigs/ENCSR271QID.bigWig", "name": "ENCSR271QID observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR271QID" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR271QID/ENCSR271QID_w_bias.bw", "name": "ENCSR271QID DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR271QID" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR271QID/ENCSR271QID_wo_bias.bw", "name": "ENCSR271QID DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR271QID" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR271QID/full_ENCSR271QID.counts.bigwig", "name": "ENCSR271QID DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR271QID" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR271QID/full_ENCSR271QID.profile.bigwig", "name": "ENCSR271QID DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR271QID" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR635GDW/preprocessing/bigWigs/ENCSR635GDW.bigWig", "name": "ENCSR635GDW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR635GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (79 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635GDW/ENCSR635GDW_w_bias.bw", "name": "ENCSR635GDW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (79 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635GDW/ENCSR635GDW_wo_bias.bw", "name": "ENCSR635GDW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (79 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635GDW/full_ENCSR635GDW.counts.bigwig", "name": "ENCSR635GDW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (79 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635GDW/full_ENCSR635GDW.profile.bigwig", "name": "ENCSR635GDW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635GDW" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (79 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR274FZD/preprocessing/bigWigs/ENCSR274FZD.bigWig", "name": "ENCSR274FZD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR274FZD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274FZD/ENCSR274FZD_w_bias.bw", "name": "ENCSR274FZD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR274FZD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274FZD/ENCSR274FZD_wo_bias.bw", "name": "ENCSR274FZD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR274FZD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274FZD/full_ENCSR274FZD.counts.bigwig", "name": "ENCSR274FZD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR274FZD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR274FZD/full_ENCSR274FZD.profile.bigwig", "name": "ENCSR274FZD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR274FZD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR839GHA/preprocessing/bigWigs/ENCSR839GHA.bigWig", "name": "ENCSR839GHA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR839GHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839GHA/ENCSR839GHA_w_bias.bw", "name": "ENCSR839GHA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR839GHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839GHA/ENCSR839GHA_wo_bias.bw", "name": "ENCSR839GHA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR839GHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839GHA/full_ENCSR839GHA.counts.bigwig", "name": "ENCSR839GHA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR839GHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839GHA/full_ENCSR839GHA.profile.bigwig", "name": "ENCSR839GHA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR839GHA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR060UPU/preprocessing/bigWigs/ENCSR060UPU.bigWig", "name": "ENCSR060UPU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR060UPU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (89 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060UPU/ENCSR060UPU_w_bias.bw", "name": "ENCSR060UPU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060UPU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (89 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060UPU/ENCSR060UPU_wo_bias.bw", "name": "ENCSR060UPU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060UPU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (89 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060UPU/full_ENCSR060UPU.counts.bigwig", "name": "ENCSR060UPU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060UPU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (89 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060UPU/full_ENCSR060UPU.profile.bigwig", "name": "ENCSR060UPU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060UPU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (89 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR677XGD/preprocessing/bigWigs/ENCSR677XGD.bigWig", "name": "ENCSR677XGD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR677XGD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR677XGD/ENCSR677XGD_w_bias.bw", "name": "ENCSR677XGD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR677XGD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR677XGD/ENCSR677XGD_wo_bias.bw", "name": "ENCSR677XGD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR677XGD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR677XGD/full_ENCSR677XGD.counts.bigwig", "name": "ENCSR677XGD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR677XGD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR677XGD/full_ENCSR677XGD.profile.bigwig", "name": "ENCSR677XGD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR677XGD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (89 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR879XUH/preprocessing/bigWigs/ENCSR879XUH.bigWig", "name": "ENCSR879XUH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR879XUH" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879XUH/ENCSR879XUH_w_bias.bw", "name": "ENCSR879XUH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR879XUH" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879XUH/ENCSR879XUH_wo_bias.bw", "name": "ENCSR879XUH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR879XUH" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879XUH/full_ENCSR879XUH.counts.bigwig", "name": "ENCSR879XUH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR879XUH" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR879XUH/full_ENCSR879XUH.profile.bigwig", "name": "ENCSR879XUH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR879XUH" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR703VGI/preprocessing/bigWigs/ENCSR703VGI.bigWig", "name": "ENCSR703VGI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR703VGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR703VGI/ENCSR703VGI_w_bias.bw", "name": "ENCSR703VGI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR703VGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR703VGI/ENCSR703VGI_wo_bias.bw", "name": "ENCSR703VGI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR703VGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR703VGI/full_ENCSR703VGI.counts.bigwig", "name": "ENCSR703VGI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR703VGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR703VGI/full_ENCSR703VGI.profile.bigwig", "name": "ENCSR703VGI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR703VGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (33 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR532DBH/preprocessing/bigWigs/ENCSR532DBH.bigWig", "name": "ENCSR532DBH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR532DBH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR532DBH/ENCSR532DBH_w_bias.bw", "name": "ENCSR532DBH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR532DBH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR532DBH/ENCSR532DBH_wo_bias.bw", "name": "ENCSR532DBH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR532DBH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR532DBH/full_ENCSR532DBH.counts.bigwig", "name": "ENCSR532DBH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR532DBH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR532DBH/full_ENCSR532DBH.profile.bigwig", "name": "ENCSR532DBH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR532DBH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR440BPA/preprocessing/bigWigs/ENCSR440BPA.bigWig", "name": "ENCSR440BPA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR440BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440BPA/ENCSR440BPA_w_bias.bw", "name": "ENCSR440BPA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR440BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440BPA/ENCSR440BPA_wo_bias.bw", "name": "ENCSR440BPA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR440BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440BPA/full_ENCSR440BPA.counts.bigwig", "name": "ENCSR440BPA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR440BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440BPA/full_ENCSR440BPA.profile.bigwig", "name": "ENCSR440BPA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR440BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (87 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR340XQX/preprocessing/bigWigs/ENCSR340XQX.bigWig", "name": "ENCSR340XQX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR340XQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340XQX/ENCSR340XQX_w_bias.bw", "name": "ENCSR340XQX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR340XQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340XQX/ENCSR340XQX_wo_bias.bw", "name": "ENCSR340XQX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR340XQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340XQX/full_ENCSR340XQX.counts.bigwig", "name": "ENCSR340XQX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR340XQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR340XQX/full_ENCSR340XQX.profile.bigwig", "name": "ENCSR340XQX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR340XQX" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR662RIZ/preprocessing/bigWigs/ENCSR662RIZ.bigWig", "name": "ENCSR662RIZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR662RIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662RIZ/ENCSR662RIZ_w_bias.bw", "name": "ENCSR662RIZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR662RIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662RIZ/ENCSR662RIZ_wo_bias.bw", "name": "ENCSR662RIZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR662RIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662RIZ/full_ENCSR662RIZ.counts.bigwig", "name": "ENCSR662RIZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR662RIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR662RIZ/full_ENCSR662RIZ.profile.bigwig", "name": "ENCSR662RIZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR662RIZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens H9", "biosample term name": "H9", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR134IUJ/preprocessing/bigWigs/ENCSR134IUJ.bigWig", "name": "ENCSR134IUJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR134IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134IUJ/ENCSR134IUJ_w_bias.bw", "name": "ENCSR134IUJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR134IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134IUJ/ENCSR134IUJ_wo_bias.bw", "name": "ENCSR134IUJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR134IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134IUJ/full_ENCSR134IUJ.counts.bigwig", "name": "ENCSR134IUJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR134IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134IUJ/full_ENCSR134IUJ.profile.bigwig", "name": "ENCSR134IUJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR134IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR305WAA/preprocessing/bigWigs/ENCSR305WAA.bigWig", "name": "ENCSR305WAA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR305WAA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WAA/ENCSR305WAA_w_bias.bw", "name": "ENCSR305WAA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR305WAA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WAA/ENCSR305WAA_wo_bias.bw", "name": "ENCSR305WAA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR305WAA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WAA/full_ENCSR305WAA.counts.bigwig", "name": "ENCSR305WAA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR305WAA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WAA/full_ENCSR305WAA.profile.bigwig", "name": "ENCSR305WAA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR305WAA" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR041PCL/preprocessing/bigWigs/ENCSR041PCL.bigWig", "name": "ENCSR041PCL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR041PCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR041PCL/ENCSR041PCL_w_bias.bw", "name": "ENCSR041PCL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR041PCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR041PCL/ENCSR041PCL_wo_bias.bw", "name": "ENCSR041PCL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR041PCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR041PCL/full_ENCSR041PCL.counts.bigwig", "name": "ENCSR041PCL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR041PCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR041PCL/full_ENCSR041PCL.profile.bigwig", "name": "ENCSR041PCL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR041PCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR638PZJ/preprocessing/bigWigs/ENCSR638PZJ.bigWig", "name": "ENCSR638PZJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR638PZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR638PZJ/ENCSR638PZJ_w_bias.bw", "name": "ENCSR638PZJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR638PZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR638PZJ/ENCSR638PZJ_wo_bias.bw", "name": "ENCSR638PZJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR638PZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR638PZJ/full_ENCSR638PZJ.counts.bigwig", "name": "ENCSR638PZJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR638PZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR638PZJ/full_ENCSR638PZJ.profile.bigwig", "name": "ENCSR638PZJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR638PZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR577QZP/preprocessing/bigWigs/ENCSR577QZP.bigWig", "name": "ENCSR577QZP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR577QZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR577QZP/ENCSR577QZP_w_bias.bw", "name": "ENCSR577QZP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR577QZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR577QZP/ENCSR577QZP_wo_bias.bw", "name": "ENCSR577QZP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR577QZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR577QZP/full_ENCSR577QZP.counts.bigwig", "name": "ENCSR577QZP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR577QZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR577QZP/full_ENCSR577QZP.profile.bigwig", "name": "ENCSR577QZP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR577QZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR572HUG/preprocessing/bigWigs/ENCSR572HUG.bigWig", "name": "ENCSR572HUG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR572HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572HUG/ENCSR572HUG_w_bias.bw", "name": "ENCSR572HUG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR572HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572HUG/ENCSR572HUG_wo_bias.bw", "name": "ENCSR572HUG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR572HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572HUG/full_ENCSR572HUG.counts.bigwig", "name": "ENCSR572HUG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR572HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572HUG/full_ENCSR572HUG.profile.bigwig", "name": "ENCSR572HUG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR572HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR289GZQ/preprocessing/bigWigs/ENCSR289GZQ.bigWig", "name": "ENCSR289GZQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR289GZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR289GZQ/ENCSR289GZQ_w_bias.bw", "name": "ENCSR289GZQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR289GZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR289GZQ/ENCSR289GZQ_wo_bias.bw", "name": "ENCSR289GZQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR289GZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR289GZQ/full_ENCSR289GZQ.counts.bigwig", "name": "ENCSR289GZQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR289GZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR289GZQ/full_ENCSR289GZQ.profile.bigwig", "name": "ENCSR289GZQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR289GZQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR376DAE/preprocessing/bigWigs/ENCSR376DAE.bigWig", "name": "ENCSR376DAE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR376DAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR376DAE/ENCSR376DAE_w_bias.bw", "name": "ENCSR376DAE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR376DAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR376DAE/ENCSR376DAE_wo_bias.bw", "name": "ENCSR376DAE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR376DAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR376DAE/full_ENCSR376DAE.counts.bigwig", "name": "ENCSR376DAE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR376DAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR376DAE/full_ENCSR376DAE.profile.bigwig", "name": "ENCSR376DAE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR376DAE" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR333BUP/preprocessing/bigWigs/ENCSR333BUP.bigWig", "name": "ENCSR333BUP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR333BUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR333BUP/ENCSR333BUP_w_bias.bw", "name": "ENCSR333BUP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR333BUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR333BUP/ENCSR333BUP_wo_bias.bw", "name": "ENCSR333BUP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR333BUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR333BUP/full_ENCSR333BUP.counts.bigwig", "name": "ENCSR333BUP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR333BUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR333BUP/full_ENCSR333BUP.profile.bigwig", "name": "ENCSR333BUP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR333BUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; head of caudate nucleus tissue female adult (86 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPH/preprocessing/bigWigs/ENCSR000EPH.bigWig", "name": "ENCSR000EPH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPH/ENCSR000EPH_w_bias.bw", "name": "ENCSR000EPH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPH/ENCSR000EPH_wo_bias.bw", "name": "ENCSR000EPH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPH/full_ENCSR000EPH.counts.bigwig", "name": "ENCSR000EPH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPH/full_ENCSR000EPH.profile.bigwig", "name": "ENCSR000EPH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens MCF-7", "biosample term name": "MCF-7", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR975LGK/preprocessing/bigWigs/ENCSR975LGK.bigWig", "name": "ENCSR975LGK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR975LGK" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR975LGK/ENCSR975LGK_w_bias.bw", "name": "ENCSR975LGK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR975LGK" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR975LGK/ENCSR975LGK_wo_bias.bw", "name": "ENCSR975LGK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR975LGK" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR975LGK/full_ENCSR975LGK.counts.bigwig", "name": "ENCSR975LGK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR975LGK" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR975LGK/full_ENCSR975LGK.profile.bigwig", "name": "ENCSR975LGK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR975LGK" ], "assay": "DNASE", "biosample summary": "Homo sapiens natural killer cell male adult (33 years)", "biosample term name": "natural killer cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR558SUT/preprocessing/bigWigs/ENCSR558SUT.bigWig", "name": "ENCSR558SUT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR558SUT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR558SUT/ENCSR558SUT_w_bias.bw", "name": "ENCSR558SUT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR558SUT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR558SUT/ENCSR558SUT_wo_bias.bw", "name": "ENCSR558SUT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR558SUT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR558SUT/full_ENCSR558SUT.counts.bigwig", "name": "ENCSR558SUT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR558SUT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR558SUT/full_ENCSR558SUT.profile.bigwig", "name": "ENCSR558SUT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR558SUT" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue male adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR426KLJ/preprocessing/bigWigs/ENCSR426KLJ.bigWig", "name": "ENCSR426KLJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR426KLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426KLJ/ENCSR426KLJ_w_bias.bw", "name": "ENCSR426KLJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR426KLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426KLJ/ENCSR426KLJ_wo_bias.bw", "name": "ENCSR426KLJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR426KLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426KLJ/full_ENCSR426KLJ.counts.bigwig", "name": "ENCSR426KLJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR426KLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR426KLJ/full_ENCSR426KLJ.profile.bigwig", "name": "ENCSR426KLJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR426KLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR035SZE/preprocessing/bigWigs/ENCSR035SZE.bigWig", "name": "ENCSR035SZE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR035SZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (56 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR035SZE/ENCSR035SZE_w_bias.bw", "name": "ENCSR035SZE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR035SZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (56 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR035SZE/ENCSR035SZE_wo_bias.bw", "name": "ENCSR035SZE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR035SZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (56 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR035SZE/full_ENCSR035SZE.counts.bigwig", "name": "ENCSR035SZE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR035SZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (56 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR035SZE/full_ENCSR035SZE.profile.bigwig", "name": "ENCSR035SZE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR035SZE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (56 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR209ECO/preprocessing/bigWigs/ENCSR209ECO.bigWig", "name": "ENCSR209ECO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR209ECO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR209ECO/ENCSR209ECO_w_bias.bw", "name": "ENCSR209ECO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR209ECO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR209ECO/ENCSR209ECO_wo_bias.bw", "name": "ENCSR209ECO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR209ECO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR209ECO/full_ENCSR209ECO.counts.bigwig", "name": "ENCSR209ECO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR209ECO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR209ECO/full_ENCSR209ECO.profile.bigwig", "name": "ENCSR209ECO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR209ECO" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR765ZML/preprocessing/bigWigs/ENCSR765ZML.bigWig", "name": "ENCSR765ZML observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR765ZML" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR765ZML/ENCSR765ZML_w_bias.bw", "name": "ENCSR765ZML DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR765ZML" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR765ZML/ENCSR765ZML_wo_bias.bw", "name": "ENCSR765ZML DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR765ZML" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR765ZML/full_ENCSR765ZML.counts.bigwig", "name": "ENCSR765ZML DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR765ZML" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR765ZML/full_ENCSR765ZML.profile.bigwig", "name": "ENCSR765ZML DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR765ZML" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR466SUZ/preprocessing/bigWigs/ENCSR466SUZ.bigWig", "name": "ENCSR466SUZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR466SUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR466SUZ/ENCSR466SUZ_w_bias.bw", "name": "ENCSR466SUZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR466SUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR466SUZ/ENCSR466SUZ_wo_bias.bw", "name": "ENCSR466SUZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR466SUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR466SUZ/full_ENCSR466SUZ.counts.bigwig", "name": "ENCSR466SUZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR466SUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR466SUZ/full_ENCSR466SUZ.profile.bigwig", "name": "ENCSR466SUZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR466SUZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR908MUU/preprocessing/bigWigs/ENCSR908MUU.bigWig", "name": "ENCSR908MUU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR908MUU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR908MUU/ENCSR908MUU_w_bias.bw", "name": "ENCSR908MUU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR908MUU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR908MUU/ENCSR908MUU_wo_bias.bw", "name": "ENCSR908MUU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR908MUU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR908MUU/full_ENCSR908MUU.counts.bigwig", "name": "ENCSR908MUU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR908MUU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR908MUU/full_ENCSR908MUU.profile.bigwig", "name": "ENCSR908MUU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR908MUU" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR784GVR/preprocessing/bigWigs/ENCSR784GVR.bigWig", "name": "ENCSR784GVR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR784GVR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR784GVR/ENCSR784GVR_w_bias.bw", "name": "ENCSR784GVR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR784GVR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR784GVR/ENCSR784GVR_wo_bias.bw", "name": "ENCSR784GVR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR784GVR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR784GVR/full_ENCSR784GVR.counts.bigwig", "name": "ENCSR784GVR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR784GVR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR784GVR/full_ENCSR784GVR.profile.bigwig", "name": "ENCSR784GVR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR784GVR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR480SNC/preprocessing/bigWigs/ENCSR480SNC.bigWig", "name": "ENCSR480SNC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR480SNC" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR480SNC/ENCSR480SNC_w_bias.bw", "name": "ENCSR480SNC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR480SNC" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR480SNC/ENCSR480SNC_wo_bias.bw", "name": "ENCSR480SNC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR480SNC" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR480SNC/full_ENCSR480SNC.counts.bigwig", "name": "ENCSR480SNC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR480SNC" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR480SNC/full_ENCSR480SNC.profile.bigwig", "name": "ENCSR480SNC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR480SNC" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive B cell male adult (40 years)", "biosample term name": "naive B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR483HUW/preprocessing/bigWigs/ENCSR483HUW.bigWig", "name": "ENCSR483HUW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR483HUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR483HUW/ENCSR483HUW_w_bias.bw", "name": "ENCSR483HUW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR483HUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR483HUW/ENCSR483HUW_wo_bias.bw", "name": "ENCSR483HUW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR483HUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR483HUW/full_ENCSR483HUW.counts.bigwig", "name": "ENCSR483HUW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR483HUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR483HUW/full_ENCSR483HUW.profile.bigwig", "name": "ENCSR483HUW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR483HUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR984HJW/preprocessing/bigWigs/ENCSR984HJW.bigWig", "name": "ENCSR984HJW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR984HJW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HJW/ENCSR984HJW_w_bias.bw", "name": "ENCSR984HJW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984HJW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HJW/ENCSR984HJW_wo_bias.bw", "name": "ENCSR984HJW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984HJW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HJW/full_ENCSR984HJW.counts.bigwig", "name": "ENCSR984HJW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984HJW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HJW/full_ENCSR984HJW.profile.bigwig", "name": "ENCSR984HJW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984HJW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR969QKG/preprocessing/bigWigs/ENCSR969QKG.bigWig", "name": "ENCSR969QKG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR969QKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR969QKG/ENCSR969QKG_w_bias.bw", "name": "ENCSR969QKG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR969QKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR969QKG/ENCSR969QKG_wo_bias.bw", "name": "ENCSR969QKG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR969QKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR969QKG/full_ENCSR969QKG.counts.bigwig", "name": "ENCSR969QKG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR969QKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR969QKG/full_ENCSR969QKG.profile.bigwig", "name": "ENCSR969QKG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR969QKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR086PIL/preprocessing/bigWigs/ENCSR086PIL.bigWig", "name": "ENCSR086PIL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR086PIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR086PIL/ENCSR086PIL_w_bias.bw", "name": "ENCSR086PIL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR086PIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR086PIL/ENCSR086PIL_wo_bias.bw", "name": "ENCSR086PIL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR086PIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR086PIL/full_ENCSR086PIL.counts.bigwig", "name": "ENCSR086PIL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR086PIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR086PIL/full_ENCSR086PIL.profile.bigwig", "name": "ENCSR086PIL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR086PIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR811OUF/preprocessing/bigWigs/ENCSR811OUF.bigWig", "name": "ENCSR811OUF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR811OUF" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR811OUF/ENCSR811OUF_w_bias.bw", "name": "ENCSR811OUF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR811OUF" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR811OUF/ENCSR811OUF_wo_bias.bw", "name": "ENCSR811OUF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR811OUF" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR811OUF/full_ENCSR811OUF.counts.bigwig", "name": "ENCSR811OUF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR811OUF" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR811OUF/full_ENCSR811OUF.profile.bigwig", "name": "ENCSR811OUF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR811OUF" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue male adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR801VSK/preprocessing/bigWigs/ENCSR801VSK.bigWig", "name": "ENCSR801VSK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR801VSK" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-4 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR801VSK/ENCSR801VSK_w_bias.bw", "name": "ENCSR801VSK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR801VSK" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-4 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR801VSK/ENCSR801VSK_wo_bias.bw", "name": "ENCSR801VSK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR801VSK" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-4 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR801VSK/full_ENCSR801VSK.counts.bigwig", "name": "ENCSR801VSK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR801VSK" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-4 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR801VSK/full_ENCSR801VSK.profile.bigwig", "name": "ENCSR801VSK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR801VSK" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (37 years) treated with 100 ng/mL Interleukin-4 for 8 hours, 50 U/mL Interleukin-2 for 16 hours, anti-CD3 and anti-CD28 coated beads for 16 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR769OIG/preprocessing/bigWigs/ENCSR769OIG.bigWig", "name": "ENCSR769OIG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR769OIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR769OIG/ENCSR769OIG_w_bias.bw", "name": "ENCSR769OIG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR769OIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR769OIG/ENCSR769OIG_wo_bias.bw", "name": "ENCSR769OIG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR769OIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR769OIG/full_ENCSR769OIG.counts.bigwig", "name": "ENCSR769OIG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR769OIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR769OIG/full_ENCSR769OIG.profile.bigwig", "name": "ENCSR769OIG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR769OIG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR510GRY/preprocessing/bigWigs/ENCSR510GRY.bigWig", "name": "ENCSR510GRY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR510GRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510GRY/ENCSR510GRY_w_bias.bw", "name": "ENCSR510GRY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR510GRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510GRY/ENCSR510GRY_wo_bias.bw", "name": "ENCSR510GRY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR510GRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510GRY/full_ENCSR510GRY.counts.bigwig", "name": "ENCSR510GRY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR510GRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR510GRY/full_ENCSR510GRY.profile.bigwig", "name": "ENCSR510GRY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR510GRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR770JCP/preprocessing/bigWigs/ENCSR770JCP.bigWig", "name": "ENCSR770JCP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR770JCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (75 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770JCP/ENCSR770JCP_w_bias.bw", "name": "ENCSR770JCP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR770JCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (75 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770JCP/ENCSR770JCP_wo_bias.bw", "name": "ENCSR770JCP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR770JCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (75 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770JCP/full_ENCSR770JCP.counts.bigwig", "name": "ENCSR770JCP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR770JCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (75 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR770JCP/full_ENCSR770JCP.profile.bigwig", "name": "ENCSR770JCP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR770JCP" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (75 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR121BSW/preprocessing/bigWigs/ENCSR121BSW.bigWig", "name": "ENCSR121BSW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR121BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121BSW/ENCSR121BSW_w_bias.bw", "name": "ENCSR121BSW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR121BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121BSW/ENCSR121BSW_wo_bias.bw", "name": "ENCSR121BSW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR121BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121BSW/full_ENCSR121BSW.counts.bigwig", "name": "ENCSR121BSW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR121BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR121BSW/full_ENCSR121BSW.profile.bigwig", "name": "ENCSR121BSW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR121BSW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR323TXQ/preprocessing/bigWigs/ENCSR323TXQ.bigWig", "name": "ENCSR323TXQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR323TXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323TXQ/ENCSR323TXQ_w_bias.bw", "name": "ENCSR323TXQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR323TXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323TXQ/ENCSR323TXQ_wo_bias.bw", "name": "ENCSR323TXQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR323TXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323TXQ/full_ENCSR323TXQ.counts.bigwig", "name": "ENCSR323TXQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR323TXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323TXQ/full_ENCSR323TXQ.profile.bigwig", "name": "ENCSR323TXQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR323TXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR650TZF/preprocessing/bigWigs/ENCSR650TZF.bigWig", "name": "ENCSR650TZF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR650TZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650TZF/ENCSR650TZF_w_bias.bw", "name": "ENCSR650TZF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR650TZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650TZF/ENCSR650TZF_wo_bias.bw", "name": "ENCSR650TZF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR650TZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650TZF/full_ENCSR650TZF.counts.bigwig", "name": "ENCSR650TZF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR650TZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR650TZF/full_ENCSR650TZF.profile.bigwig", "name": "ENCSR650TZF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR650TZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR887VUC/preprocessing/bigWigs/ENCSR887VUC.bigWig", "name": "ENCSR887VUC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR887VUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (73 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR887VUC/ENCSR887VUC_w_bias.bw", "name": "ENCSR887VUC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR887VUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (73 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR887VUC/ENCSR887VUC_wo_bias.bw", "name": "ENCSR887VUC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR887VUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (73 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR887VUC/full_ENCSR887VUC.counts.bigwig", "name": "ENCSR887VUC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR887VUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (73 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR887VUC/full_ENCSR887VUC.profile.bigwig", "name": "ENCSR887VUC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR887VUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; posterior cingulate gyrus tissue male adult (73 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR654GSG/preprocessing/bigWigs/ENCSR654GSG.bigWig", "name": "ENCSR654GSG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR654GSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654GSG/ENCSR654GSG_w_bias.bw", "name": "ENCSR654GSG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR654GSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654GSG/ENCSR654GSG_wo_bias.bw", "name": "ENCSR654GSG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR654GSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654GSG/full_ENCSR654GSG.counts.bigwig", "name": "ENCSR654GSG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR654GSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654GSG/full_ENCSR654GSG.profile.bigwig", "name": "ENCSR654GSG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR654GSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR109DTU/preprocessing/bigWigs/ENCSR109DTU.bigWig", "name": "ENCSR109DTU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR109DTU" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR109DTU/ENCSR109DTU_w_bias.bw", "name": "ENCSR109DTU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR109DTU" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR109DTU/ENCSR109DTU_wo_bias.bw", "name": "ENCSR109DTU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR109DTU" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR109DTU/full_ENCSR109DTU.counts.bigwig", "name": "ENCSR109DTU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR109DTU" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR109DTU/full_ENCSR109DTU.profile.bigwig", "name": "ENCSR109DTU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR109DTU" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated B cell male adult (22 years) treated with 0.5 \u03bcM CpG ODN for 24 hours", "biosample term name": "activated B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR354SDH/preprocessing/bigWigs/ENCSR354SDH.bigWig", "name": "ENCSR354SDH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR354SDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354SDH/ENCSR354SDH_w_bias.bw", "name": "ENCSR354SDH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR354SDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354SDH/ENCSR354SDH_wo_bias.bw", "name": "ENCSR354SDH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR354SDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354SDH/full_ENCSR354SDH.counts.bigwig", "name": "ENCSR354SDH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR354SDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR354SDH/full_ENCSR354SDH.profile.bigwig", "name": "ENCSR354SDH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR354SDH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMR/preprocessing/bigWigs/ENCSR000EMR.bigWig", "name": "ENCSR000EMR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12864", "biosample term name": "GM12864", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMR/ENCSR000EMR_w_bias.bw", "name": "ENCSR000EMR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12864", "biosample term name": "GM12864", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMR/ENCSR000EMR_wo_bias.bw", "name": "ENCSR000EMR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12864", "biosample term name": "GM12864", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMR/full_ENCSR000EMR.counts.bigwig", "name": "ENCSR000EMR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12864", "biosample term name": "GM12864", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMR/full_ENCSR000EMR.profile.bigwig", "name": "ENCSR000EMR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12864", "biosample term name": "GM12864", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR553WJB/preprocessing/bigWigs/ENCSR553WJB.bigWig", "name": "ENCSR553WJB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR553WJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR553WJB/ENCSR553WJB_w_bias.bw", "name": "ENCSR553WJB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR553WJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR553WJB/ENCSR553WJB_wo_bias.bw", "name": "ENCSR553WJB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR553WJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR553WJB/full_ENCSR553WJB.counts.bigwig", "name": "ENCSR553WJB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR553WJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR553WJB/full_ENCSR553WJB.profile.bigwig", "name": "ENCSR553WJB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR553WJB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR921PPJ/preprocessing/bigWigs/ENCSR921PPJ.bigWig", "name": "ENCSR921PPJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR921PPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR921PPJ/ENCSR921PPJ_w_bias.bw", "name": "ENCSR921PPJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR921PPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR921PPJ/ENCSR921PPJ_wo_bias.bw", "name": "ENCSR921PPJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR921PPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR921PPJ/full_ENCSR921PPJ.counts.bigwig", "name": "ENCSR921PPJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR921PPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR921PPJ/full_ENCSR921PPJ.profile.bigwig", "name": "ENCSR921PPJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR921PPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; middle frontal area 46 tissue female adult (83 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR832XVZ/preprocessing/bigWigs/ENCSR832XVZ.bigWig", "name": "ENCSR832XVZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR832XVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832XVZ/ENCSR832XVZ_w_bias.bw", "name": "ENCSR832XVZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR832XVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832XVZ/ENCSR832XVZ_wo_bias.bw", "name": "ENCSR832XVZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR832XVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832XVZ/full_ENCSR832XVZ.counts.bigwig", "name": "ENCSR832XVZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR832XVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832XVZ/full_ENCSR832XVZ.profile.bigwig", "name": "ENCSR832XVZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR832XVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (86 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR920JUM/preprocessing/bigWigs/ENCSR920JUM.bigWig", "name": "ENCSR920JUM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR920JUM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR920JUM/ENCSR920JUM_w_bias.bw", "name": "ENCSR920JUM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR920JUM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR920JUM/ENCSR920JUM_wo_bias.bw", "name": "ENCSR920JUM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR920JUM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR920JUM/full_ENCSR920JUM.counts.bigwig", "name": "ENCSR920JUM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR920JUM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR920JUM/full_ENCSR920JUM.profile.bigwig", "name": "ENCSR920JUM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR920JUM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR038POV/preprocessing/bigWigs/ENCSR038POV.bigWig", "name": "ENCSR038POV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR038POV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038POV/ENCSR038POV_w_bias.bw", "name": "ENCSR038POV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR038POV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038POV/ENCSR038POV_wo_bias.bw", "name": "ENCSR038POV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR038POV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038POV/full_ENCSR038POV.counts.bigwig", "name": "ENCSR038POV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR038POV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR038POV/full_ENCSR038POV.profile.bigwig", "name": "ENCSR038POV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR038POV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR537TXP/preprocessing/bigWigs/ENCSR537TXP.bigWig", "name": "ENCSR537TXP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR537TXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR537TXP/ENCSR537TXP_w_bias.bw", "name": "ENCSR537TXP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR537TXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR537TXP/ENCSR537TXP_wo_bias.bw", "name": "ENCSR537TXP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR537TXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR537TXP/full_ENCSR537TXP.counts.bigwig", "name": "ENCSR537TXP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR537TXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR537TXP/full_ENCSR537TXP.profile.bigwig", "name": "ENCSR537TXP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR537TXP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (50 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR945KSP/preprocessing/bigWigs/ENCSR945KSP.bigWig", "name": "ENCSR945KSP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR945KSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mesothelial cell of epicardium", "biosample term name": "mesothelial cell of epicardium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945KSP/ENCSR945KSP_w_bias.bw", "name": "ENCSR945KSP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR945KSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mesothelial cell of epicardium", "biosample term name": "mesothelial cell of epicardium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945KSP/ENCSR945KSP_wo_bias.bw", "name": "ENCSR945KSP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR945KSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mesothelial cell of epicardium", "biosample term name": "mesothelial cell of epicardium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945KSP/full_ENCSR945KSP.counts.bigwig", "name": "ENCSR945KSP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR945KSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mesothelial cell of epicardium", "biosample term name": "mesothelial cell of epicardium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR945KSP/full_ENCSR945KSP.profile.bigwig", "name": "ENCSR945KSP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR945KSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens mesothelial cell of epicardium", "biosample term name": "mesothelial cell of epicardium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR839RAJ/preprocessing/bigWigs/ENCSR839RAJ.bigWig", "name": "ENCSR839RAJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR839RAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (85 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839RAJ/ENCSR839RAJ_w_bias.bw", "name": "ENCSR839RAJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR839RAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (85 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839RAJ/ENCSR839RAJ_wo_bias.bw", "name": "ENCSR839RAJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR839RAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (85 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839RAJ/full_ENCSR839RAJ.counts.bigwig", "name": "ENCSR839RAJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR839RAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (85 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR839RAJ/full_ENCSR839RAJ.profile.bigwig", "name": "ENCSR839RAJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR839RAJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; middle frontal area 46 tissue female adult (85 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR508FVM/preprocessing/bigWigs/ENCSR508FVM.bigWig", "name": "ENCSR508FVM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR508FVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (54 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR508FVM/ENCSR508FVM_w_bias.bw", "name": "ENCSR508FVM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR508FVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (54 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR508FVM/ENCSR508FVM_wo_bias.bw", "name": "ENCSR508FVM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR508FVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (54 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR508FVM/full_ENCSR508FVM.counts.bigwig", "name": "ENCSR508FVM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR508FVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (54 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR508FVM/full_ENCSR508FVM.profile.bigwig", "name": "ENCSR508FVM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR508FVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens tibial nerve tissue male adult (54 years)", "biosample term name": "tibial nerve", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR943KMD/preprocessing/bigWigs/ENCSR943KMD.bigWig", "name": "ENCSR943KMD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR943KMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (38 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943KMD/ENCSR943KMD_w_bias.bw", "name": "ENCSR943KMD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943KMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (38 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943KMD/ENCSR943KMD_wo_bias.bw", "name": "ENCSR943KMD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943KMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (38 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943KMD/full_ENCSR943KMD.counts.bigwig", "name": "ENCSR943KMD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943KMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (38 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943KMD/full_ENCSR943KMD.profile.bigwig", "name": "ENCSR943KMD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943KMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (38 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR859HEW/preprocessing/bigWigs/ENCSR859HEW.bigWig", "name": "ENCSR859HEW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR859HEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR859HEW/ENCSR859HEW_w_bias.bw", "name": "ENCSR859HEW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR859HEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR859HEW/ENCSR859HEW_wo_bias.bw", "name": "ENCSR859HEW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR859HEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR859HEW/full_ENCSR859HEW.counts.bigwig", "name": "ENCSR859HEW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR859HEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR859HEW/full_ENCSR859HEW.profile.bigwig", "name": "ENCSR859HEW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR859HEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR042WQA/preprocessing/bigWigs/ENCSR042WQA.bigWig", "name": "ENCSR042WQA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR042WQA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (56 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042WQA/ENCSR042WQA_w_bias.bw", "name": "ENCSR042WQA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR042WQA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (56 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042WQA/ENCSR042WQA_wo_bias.bw", "name": "ENCSR042WQA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR042WQA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (56 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042WQA/full_ENCSR042WQA.counts.bigwig", "name": "ENCSR042WQA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR042WQA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (56 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR042WQA/full_ENCSR042WQA.profile.bigwig", "name": "ENCSR042WQA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR042WQA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (56 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR987CQN/preprocessing/bigWigs/ENCSR987CQN.bigWig", "name": "ENCSR987CQN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR987CQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR987CQN/ENCSR987CQN_w_bias.bw", "name": "ENCSR987CQN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR987CQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR987CQN/ENCSR987CQN_wo_bias.bw", "name": "ENCSR987CQN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR987CQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR987CQN/full_ENCSR987CQN.counts.bigwig", "name": "ENCSR987CQN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR987CQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR987CQN/full_ENCSR987CQN.profile.bigwig", "name": "ENCSR987CQN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR987CQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (88 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR652IZW/preprocessing/bigWigs/ENCSR652IZW.bigWig", "name": "ENCSR652IZW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR652IZW" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR652IZW/ENCSR652IZW_w_bias.bw", "name": "ENCSR652IZW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR652IZW" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR652IZW/ENCSR652IZW_wo_bias.bw", "name": "ENCSR652IZW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR652IZW" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR652IZW/full_ENCSR652IZW.counts.bigwig", "name": "ENCSR652IZW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR652IZW" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR652IZW/full_ENCSR652IZW.profile.bigwig", "name": "ENCSR652IZW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR652IZW" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR799MVH/preprocessing/bigWigs/ENCSR799MVH.bigWig", "name": "ENCSR799MVH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR799MVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MVH/ENCSR799MVH_w_bias.bw", "name": "ENCSR799MVH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR799MVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MVH/ENCSR799MVH_wo_bias.bw", "name": "ENCSR799MVH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR799MVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MVH/full_ENCSR799MVH.counts.bigwig", "name": "ENCSR799MVH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR799MVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MVH/full_ENCSR799MVH.profile.bigwig", "name": "ENCSR799MVH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR799MVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR025BWH/preprocessing/bigWigs/ENCSR025BWH.bigWig", "name": "ENCSR025BWH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR025BWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025BWH/ENCSR025BWH_w_bias.bw", "name": "ENCSR025BWH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR025BWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025BWH/ENCSR025BWH_wo_bias.bw", "name": "ENCSR025BWH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR025BWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025BWH/full_ENCSR025BWH.counts.bigwig", "name": "ENCSR025BWH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR025BWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025BWH/full_ENCSR025BWH.profile.bigwig", "name": "ENCSR025BWH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR025BWH" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (24 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR221ROM/preprocessing/bigWigs/ENCSR221ROM.bigWig", "name": "ENCSR221ROM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR221ROM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR221ROM/ENCSR221ROM_w_bias.bw", "name": "ENCSR221ROM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR221ROM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR221ROM/ENCSR221ROM_wo_bias.bw", "name": "ENCSR221ROM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR221ROM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR221ROM/full_ENCSR221ROM.counts.bigwig", "name": "ENCSR221ROM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR221ROM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR221ROM/full_ENCSR221ROM.profile.bigwig", "name": "ENCSR221ROM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR221ROM" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR541UPY/preprocessing/bigWigs/ENCSR541UPY.bigWig", "name": "ENCSR541UPY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR541UPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (98 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541UPY/ENCSR541UPY_w_bias.bw", "name": "ENCSR541UPY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541UPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (98 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541UPY/ENCSR541UPY_wo_bias.bw", "name": "ENCSR541UPY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541UPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (98 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541UPY/full_ENCSR541UPY.counts.bigwig", "name": "ENCSR541UPY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541UPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (98 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541UPY/full_ENCSR541UPY.profile.bigwig", "name": "ENCSR541UPY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541UPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (98 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR518YYX/preprocessing/bigWigs/ENCSR518YYX.bigWig", "name": "ENCSR518YYX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR518YYX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518YYX/ENCSR518YYX_w_bias.bw", "name": "ENCSR518YYX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR518YYX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518YYX/ENCSR518YYX_wo_bias.bw", "name": "ENCSR518YYX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR518YYX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518YYX/full_ENCSR518YYX.counts.bigwig", "name": "ENCSR518YYX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR518YYX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518YYX/full_ENCSR518YYX.profile.bigwig", "name": "ENCSR518YYX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR518YYX" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR215DXT/preprocessing/bigWigs/ENCSR215DXT.bigWig", "name": "ENCSR215DXT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR215DXT" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR215DXT/ENCSR215DXT_w_bias.bw", "name": "ENCSR215DXT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR215DXT" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR215DXT/ENCSR215DXT_wo_bias.bw", "name": "ENCSR215DXT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR215DXT" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR215DXT/full_ENCSR215DXT.counts.bigwig", "name": "ENCSR215DXT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR215DXT" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR215DXT/full_ENCSR215DXT.profile.bigwig", "name": "ENCSR215DXT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR215DXT" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (90 or above years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR126EVX/preprocessing/bigWigs/ENCSR126EVX.bigWig", "name": "ENCSR126EVX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR126EVX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVX/ENCSR126EVX_w_bias.bw", "name": "ENCSR126EVX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR126EVX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVX/ENCSR126EVX_wo_bias.bw", "name": "ENCSR126EVX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR126EVX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVX/full_ENCSR126EVX.counts.bigwig", "name": "ENCSR126EVX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR126EVX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR126EVX/full_ENCSR126EVX.profile.bigwig", "name": "ENCSR126EVX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR126EVX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR299BQG/preprocessing/bigWigs/ENCSR299BQG.bigWig", "name": "ENCSR299BQG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR299BQG" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (22 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299BQG/ENCSR299BQG_w_bias.bw", "name": "ENCSR299BQG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR299BQG" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (22 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299BQG/ENCSR299BQG_wo_bias.bw", "name": "ENCSR299BQG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR299BQG" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (22 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299BQG/full_ENCSR299BQG.counts.bigwig", "name": "ENCSR299BQG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR299BQG" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (22 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR299BQG/full_ENCSR299BQG.profile.bigwig", "name": "ENCSR299BQG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR299BQG" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (22 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR722HJG/preprocessing/bigWigs/ENCSR722HJG.bigWig", "name": "ENCSR722HJG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR722HJG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR722HJG/ENCSR722HJG_w_bias.bw", "name": "ENCSR722HJG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR722HJG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR722HJG/ENCSR722HJG_wo_bias.bw", "name": "ENCSR722HJG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR722HJG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR722HJG/full_ENCSR722HJG.counts.bigwig", "name": "ENCSR722HJG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR722HJG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR722HJG/full_ENCSR722HJG.profile.bigwig", "name": "ENCSR722HJG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR722HJG" ], "assay": "DNASE", "biosample summary": "Homo sapiens head of caudate nucleus tissue female adult (82 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR524QPZ/preprocessing/bigWigs/ENCSR524QPZ.bigWig", "name": "ENCSR524QPZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR524QPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QPZ/ENCSR524QPZ_w_bias.bw", "name": "ENCSR524QPZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR524QPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QPZ/ENCSR524QPZ_wo_bias.bw", "name": "ENCSR524QPZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR524QPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QPZ/full_ENCSR524QPZ.counts.bigwig", "name": "ENCSR524QPZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR524QPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR524QPZ/full_ENCSR524QPZ.profile.bigwig", "name": "ENCSR524QPZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR524QPZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (78 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR730IHD/preprocessing/bigWigs/ENCSR730IHD.bigWig", "name": "ENCSR730IHD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR730IHD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR730IHD/ENCSR730IHD_w_bias.bw", "name": "ENCSR730IHD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR730IHD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR730IHD/ENCSR730IHD_wo_bias.bw", "name": "ENCSR730IHD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR730IHD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR730IHD/full_ENCSR730IHD.counts.bigwig", "name": "ENCSR730IHD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR730IHD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR730IHD/full_ENCSR730IHD.profile.bigwig", "name": "ENCSR730IHD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR730IHD" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR889ONK/preprocessing/bigWigs/ENCSR889ONK.bigWig", "name": "ENCSR889ONK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR889ONK" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889ONK/ENCSR889ONK_w_bias.bw", "name": "ENCSR889ONK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR889ONK" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889ONK/ENCSR889ONK_wo_bias.bw", "name": "ENCSR889ONK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR889ONK" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889ONK/full_ENCSR889ONK.counts.bigwig", "name": "ENCSR889ONK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR889ONK" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889ONK/full_ENCSR889ONK.profile.bigwig", "name": "ENCSR889ONK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR889ONK" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR928PKL/preprocessing/bigWigs/ENCSR928PKL.bigWig", "name": "ENCSR928PKL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR928PKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928PKL/ENCSR928PKL_w_bias.bw", "name": "ENCSR928PKL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR928PKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928PKL/ENCSR928PKL_wo_bias.bw", "name": "ENCSR928PKL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR928PKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928PKL/full_ENCSR928PKL.counts.bigwig", "name": "ENCSR928PKL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR928PKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR928PKL/full_ENCSR928PKL.profile.bigwig", "name": "ENCSR928PKL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR928PKL" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment; middle frontal area 46 tissue female adult (81 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR111LTT/preprocessing/bigWigs/ENCSR111LTT.bigWig", "name": "ENCSR111LTT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR111LTT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (55 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111LTT/ENCSR111LTT_w_bias.bw", "name": "ENCSR111LTT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR111LTT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (55 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111LTT/ENCSR111LTT_wo_bias.bw", "name": "ENCSR111LTT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR111LTT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (55 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111LTT/full_ENCSR111LTT.counts.bigwig", "name": "ENCSR111LTT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR111LTT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (55 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR111LTT/full_ENCSR111LTT.profile.bigwig", "name": "ENCSR111LTT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR111LTT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (55 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR646JBR/preprocessing/bigWigs/ENCSR646JBR.bigWig", "name": "ENCSR646JBR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR646JBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR646JBR/ENCSR646JBR_w_bias.bw", "name": "ENCSR646JBR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR646JBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR646JBR/ENCSR646JBR_wo_bias.bw", "name": "ENCSR646JBR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR646JBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR646JBR/full_ENCSR646JBR.counts.bigwig", "name": "ENCSR646JBR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR646JBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR646JBR/full_ENCSR646JBR.profile.bigwig", "name": "ENCSR646JBR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR646JBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMD/preprocessing/bigWigs/ENCSR000EMD.bigWig", "name": "ENCSR000EMD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens BE2C", "biosample term name": "BE2C", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMD/ENCSR000EMD_w_bias.bw", "name": "ENCSR000EMD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens BE2C", "biosample term name": "BE2C", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMD/ENCSR000EMD_wo_bias.bw", "name": "ENCSR000EMD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens BE2C", "biosample term name": "BE2C", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMD/full_ENCSR000EMD.counts.bigwig", "name": "ENCSR000EMD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens BE2C", "biosample term name": "BE2C", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMD/full_ENCSR000EMD.profile.bigwig", "name": "ENCSR000EMD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMD" ], "assay": "DNASE", "biosample summary": "Homo sapiens BE2C", "biosample term name": "BE2C", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EOS/preprocessing/bigWigs/ENCSR000EOS.bigWig", "name": "ENCSR000EOS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EOS" ], "assay": "DNASE", "biosample summary": "Homo sapiens Jurkat, Clone E6-1", "biosample term name": "Jurkat, Clone E6-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EOS/ENCSR000EOS_w_bias.bw", "name": "ENCSR000EOS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EOS" ], "assay": "DNASE", "biosample summary": "Homo sapiens Jurkat, Clone E6-1", "biosample term name": "Jurkat, Clone E6-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EOS/ENCSR000EOS_wo_bias.bw", "name": "ENCSR000EOS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EOS" ], "assay": "DNASE", "biosample summary": "Homo sapiens Jurkat, Clone E6-1", "biosample term name": "Jurkat, Clone E6-1", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EOS/full_ENCSR000EOS.counts.bigwig", "name": "ENCSR000EOS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EOS" ], "assay": "DNASE", "biosample summary": "Homo sapiens Jurkat, Clone E6-1", "biosample term name": "Jurkat, Clone E6-1", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EOS/full_ENCSR000EOS.profile.bigwig", "name": "ENCSR000EOS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EOS" ], "assay": "DNASE", "biosample summary": "Homo sapiens Jurkat, Clone E6-1", "biosample term name": "Jurkat, Clone E6-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR659JPP/preprocessing/bigWigs/ENCSR659JPP.bigWig", "name": "ENCSR659JPP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR659JPP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR659JPP/ENCSR659JPP_w_bias.bw", "name": "ENCSR659JPP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR659JPP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR659JPP/ENCSR659JPP_wo_bias.bw", "name": "ENCSR659JPP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR659JPP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR659JPP/full_ENCSR659JPP.counts.bigwig", "name": "ENCSR659JPP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR659JPP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR659JPP/full_ENCSR659JPP.profile.bigwig", "name": "ENCSR659JPP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR659JPP" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR649MJI/preprocessing/bigWigs/ENCSR649MJI.bigWig", "name": "ENCSR649MJI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR649MJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649MJI/ENCSR649MJI_w_bias.bw", "name": "ENCSR649MJI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR649MJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649MJI/ENCSR649MJI_wo_bias.bw", "name": "ENCSR649MJI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR649MJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649MJI/full_ENCSR649MJI.counts.bigwig", "name": "ENCSR649MJI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR649MJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649MJI/full_ENCSR649MJI.profile.bigwig", "name": "ENCSR649MJI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR649MJI" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR112AKE/preprocessing/bigWigs/ENCSR112AKE.bigWig", "name": "ENCSR112AKE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR112AKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR112AKE/ENCSR112AKE_w_bias.bw", "name": "ENCSR112AKE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR112AKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR112AKE/ENCSR112AKE_wo_bias.bw", "name": "ENCSR112AKE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR112AKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR112AKE/full_ENCSR112AKE.counts.bigwig", "name": "ENCSR112AKE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR112AKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR112AKE/full_ENCSR112AKE.profile.bigwig", "name": "ENCSR112AKE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR112AKE" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR694DOX/preprocessing/bigWigs/ENCSR694DOX.bigWig", "name": "ENCSR694DOX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR694DOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR694DOX/ENCSR694DOX_w_bias.bw", "name": "ENCSR694DOX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR694DOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR694DOX/ENCSR694DOX_wo_bias.bw", "name": "ENCSR694DOX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR694DOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR694DOX/full_ENCSR694DOX.counts.bigwig", "name": "ENCSR694DOX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR694DOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR694DOX/full_ENCSR694DOX.profile.bigwig", "name": "ENCSR694DOX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR694DOX" ], "assay": "DNASE", "biosample summary": "Homo sapiens posterior cingulate gyrus tissue male adult (83 years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR634YVQ/preprocessing/bigWigs/ENCSR634YVQ.bigWig", "name": "ENCSR634YVQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR634YVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens HK-2", "biosample term name": "HK-2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634YVQ/ENCSR634YVQ_w_bias.bw", "name": "ENCSR634YVQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR634YVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens HK-2", "biosample term name": "HK-2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634YVQ/ENCSR634YVQ_wo_bias.bw", "name": "ENCSR634YVQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR634YVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens HK-2", "biosample term name": "HK-2", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634YVQ/full_ENCSR634YVQ.counts.bigwig", "name": "ENCSR634YVQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR634YVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens HK-2", "biosample term name": "HK-2", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634YVQ/full_ENCSR634YVQ.profile.bigwig", "name": "ENCSR634YVQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR634YVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens HK-2", "biosample term name": "HK-2", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR033STL/preprocessing/bigWigs/ENCSR033STL.bigWig", "name": "ENCSR033STL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR033STL" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR033STL/ENCSR033STL_w_bias.bw", "name": "ENCSR033STL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR033STL" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR033STL/ENCSR033STL_wo_bias.bw", "name": "ENCSR033STL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR033STL" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR033STL/full_ENCSR033STL.counts.bigwig", "name": "ENCSR033STL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR033STL" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR033STL/full_ENCSR033STL.profile.bigwig", "name": "ENCSR033STL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR033STL" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR339TVH/preprocessing/bigWigs/ENCSR339TVH.bigWig", "name": "ENCSR339TVH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR339TVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR339TVH/ENCSR339TVH_w_bias.bw", "name": "ENCSR339TVH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR339TVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR339TVH/ENCSR339TVH_wo_bias.bw", "name": "ENCSR339TVH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR339TVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR339TVH/full_ENCSR339TVH.counts.bigwig", "name": "ENCSR339TVH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR339TVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR339TVH/full_ENCSR339TVH.profile.bigwig", "name": "ENCSR339TVH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR339TVH" ], "assay": "DNASE", "biosample summary": "Homo sapiens with mild cognitive impairment; head of caudate nucleus tissue female adult (90 or above years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR455GUW/preprocessing/bigWigs/ENCSR455GUW.bigWig", "name": "ENCSR455GUW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR455GUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (54 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR455GUW/ENCSR455GUW_w_bias.bw", "name": "ENCSR455GUW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR455GUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (54 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR455GUW/ENCSR455GUW_wo_bias.bw", "name": "ENCSR455GUW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR455GUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (54 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR455GUW/full_ENCSR455GUW.counts.bigwig", "name": "ENCSR455GUW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR455GUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (54 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR455GUW/full_ENCSR455GUW.profile.bigwig", "name": "ENCSR455GUW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR455GUW" ], "assay": "DNASE", "biosample summary": "Homo sapiens Peyer's patch tissue male adult (54 years)", "biosample term name": "Peyer's patch", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR740DJQ/preprocessing/bigWigs/ENCSR740DJQ.bigWig", "name": "ENCSR740DJQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR740DJQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR740DJQ/ENCSR740DJQ_w_bias.bw", "name": "ENCSR740DJQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR740DJQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR740DJQ/ENCSR740DJQ_wo_bias.bw", "name": "ENCSR740DJQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR740DJQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR740DJQ/full_ENCSR740DJQ.counts.bigwig", "name": "ENCSR740DJQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR740DJQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR740DJQ/full_ENCSR740DJQ.profile.bigwig", "name": "ENCSR740DJQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR740DJQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR163GMC/preprocessing/bigWigs/ENCSR163GMC.bigWig", "name": "ENCSR163GMC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR163GMC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163GMC/ENCSR163GMC_w_bias.bw", "name": "ENCSR163GMC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR163GMC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163GMC/ENCSR163GMC_wo_bias.bw", "name": "ENCSR163GMC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR163GMC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163GMC/full_ENCSR163GMC.counts.bigwig", "name": "ENCSR163GMC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR163GMC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163GMC/full_ENCSR163GMC.profile.bigwig", "name": "ENCSR163GMC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR163GMC" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue male adult (84 years)", "biosample term name": "head of caudate nucleus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR434OBM/preprocessing/bigWigs/ENCSR434OBM.bigWig", "name": "ENCSR434OBM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR434OBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR434OBM/ENCSR434OBM_w_bias.bw", "name": "ENCSR434OBM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR434OBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR434OBM/ENCSR434OBM_wo_bias.bw", "name": "ENCSR434OBM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR434OBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR434OBM/full_ENCSR434OBM.counts.bigwig", "name": "ENCSR434OBM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR434OBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR434OBM/full_ENCSR434OBM.profile.bigwig", "name": "ENCSR434OBM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR434OBM" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR457JOG/preprocessing/bigWigs/ENCSR457JOG.bigWig", "name": "ENCSR457JOG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR457JOG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457JOG/ENCSR457JOG_w_bias.bw", "name": "ENCSR457JOG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR457JOG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457JOG/ENCSR457JOG_wo_bias.bw", "name": "ENCSR457JOG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR457JOG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457JOG/full_ENCSR457JOG.counts.bigwig", "name": "ENCSR457JOG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR457JOG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457JOG/full_ENCSR457JOG.profile.bigwig", "name": "ENCSR457JOG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR457JOG" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR497NLU/preprocessing/bigWigs/ENCSR497NLU.bigWig", "name": "ENCSR497NLU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR497NLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR497NLU/ENCSR497NLU_w_bias.bw", "name": "ENCSR497NLU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR497NLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR497NLU/ENCSR497NLU_wo_bias.bw", "name": "ENCSR497NLU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR497NLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR497NLU/full_ENCSR497NLU.counts.bigwig", "name": "ENCSR497NLU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR497NLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR497NLU/full_ENCSR497NLU.profile.bigwig", "name": "ENCSR497NLU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR497NLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR541PUY/preprocessing/bigWigs/ENCSR541PUY.bigWig", "name": "ENCSR541PUY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR541PUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541PUY/ENCSR541PUY_w_bias.bw", "name": "ENCSR541PUY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541PUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541PUY/ENCSR541PUY_wo_bias.bw", "name": "ENCSR541PUY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR541PUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541PUY/full_ENCSR541PUY.counts.bigwig", "name": "ENCSR541PUY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541PUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR541PUY/full_ENCSR541PUY.profile.bigwig", "name": "ENCSR541PUY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR541PUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR058ELM/preprocessing/bigWigs/ENCSR058ELM.bigWig", "name": "ENCSR058ELM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR058ELM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (30 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058ELM/ENCSR058ELM_w_bias.bw", "name": "ENCSR058ELM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR058ELM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (30 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058ELM/ENCSR058ELM_wo_bias.bw", "name": "ENCSR058ELM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR058ELM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (30 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058ELM/full_ENCSR058ELM.counts.bigwig", "name": "ENCSR058ELM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR058ELM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (30 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR058ELM/full_ENCSR058ELM.profile.bigwig", "name": "ENCSR058ELM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR058ELM" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (30 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR296TFH/preprocessing/bigWigs/ENCSR296TFH.bigWig", "name": "ENCSR296TFH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR296TFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR296TFH/ENCSR296TFH_w_bias.bw", "name": "ENCSR296TFH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR296TFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR296TFH/ENCSR296TFH_wo_bias.bw", "name": "ENCSR296TFH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR296TFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR296TFH/full_ENCSR296TFH.counts.bigwig", "name": "ENCSR296TFH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR296TFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR296TFH/full_ENCSR296TFH.profile.bigwig", "name": "ENCSR296TFH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR296TFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR531UVE/preprocessing/bigWigs/ENCSR531UVE.bigWig", "name": "ENCSR531UVE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR531UVE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531UVE/ENCSR531UVE_w_bias.bw", "name": "ENCSR531UVE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR531UVE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531UVE/ENCSR531UVE_wo_bias.bw", "name": "ENCSR531UVE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR531UVE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531UVE/full_ENCSR531UVE.counts.bigwig", "name": "ENCSR531UVE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR531UVE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531UVE/full_ENCSR531UVE.profile.bigwig", "name": "ENCSR531UVE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR531UVE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR597URK/preprocessing/bigWigs/ENCSR597URK.bigWig", "name": "ENCSR597URK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR597URK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597URK/ENCSR597URK_w_bias.bw", "name": "ENCSR597URK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR597URK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597URK/ENCSR597URK_wo_bias.bw", "name": "ENCSR597URK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR597URK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597URK/full_ENCSR597URK.counts.bigwig", "name": "ENCSR597URK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR597URK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR597URK/full_ENCSR597URK.profile.bigwig", "name": "ENCSR597URK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR597URK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR164PQJ/preprocessing/bigWigs/ENCSR164PQJ.bigWig", "name": "ENCSR164PQJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR164PQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue male embryo (127 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164PQJ/ENCSR164PQJ_w_bias.bw", "name": "ENCSR164PQJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR164PQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue male embryo (127 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164PQJ/ENCSR164PQJ_wo_bias.bw", "name": "ENCSR164PQJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR164PQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue male embryo (127 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164PQJ/full_ENCSR164PQJ.counts.bigwig", "name": "ENCSR164PQJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR164PQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue male embryo (127 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR164PQJ/full_ENCSR164PQJ.profile.bigwig", "name": "ENCSR164PQJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR164PQJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue male embryo (127 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR420HOT/preprocessing/bigWigs/ENCSR420HOT.bigWig", "name": "ENCSR420HOT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR420HOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR420HOT/ENCSR420HOT_w_bias.bw", "name": "ENCSR420HOT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR420HOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR420HOT/ENCSR420HOT_wo_bias.bw", "name": "ENCSR420HOT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR420HOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR420HOT/full_ENCSR420HOT.counts.bigwig", "name": "ENCSR420HOT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR420HOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR420HOT/full_ENCSR420HOT.profile.bigwig", "name": "ENCSR420HOT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR420HOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR796SJV/preprocessing/bigWigs/ENCSR796SJV.bigWig", "name": "ENCSR796SJV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR796SJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (98 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796SJV/ENCSR796SJV_w_bias.bw", "name": "ENCSR796SJV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR796SJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (98 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796SJV/ENCSR796SJV_wo_bias.bw", "name": "ENCSR796SJV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR796SJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (98 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796SJV/full_ENCSR796SJV.counts.bigwig", "name": "ENCSR796SJV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR796SJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (98 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR796SJV/full_ENCSR796SJV.profile.bigwig", "name": "ENCSR796SJV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR796SJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (98 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EQL/preprocessing/bigWigs/ENCSR000EQL.bigWig", "name": "ENCSR000EQL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQL/ENCSR000EQL_w_bias.bw", "name": "ENCSR000EQL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQL/ENCSR000EQL_wo_bias.bw", "name": "ENCSR000EQL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQL/full_ENCSR000EQL.counts.bigwig", "name": "ENCSR000EQL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQL/full_ENCSR000EQL.profile.bigwig", "name": "ENCSR000EQL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens WERI-Rb-1", "biosample term name": "WERI-Rb-1", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPK/preprocessing/bigWigs/ENCSR000EPK.bigWig", "name": "ENCSR000EPK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female", "biosample term name": "CD14-positive monocyte", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPK/ENCSR000EPK_w_bias.bw", "name": "ENCSR000EPK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female", "biosample term name": "CD14-positive monocyte", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPK/ENCSR000EPK_wo_bias.bw", "name": "ENCSR000EPK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female", "biosample term name": "CD14-positive monocyte", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPK/full_ENCSR000EPK.counts.bigwig", "name": "ENCSR000EPK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female", "biosample term name": "CD14-positive monocyte", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPK/full_ENCSR000EPK.profile.bigwig", "name": "ENCSR000EPK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female", "biosample term name": "CD14-positive monocyte", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR518JGY/preprocessing/bigWigs/ENCSR518JGY.bigWig", "name": "ENCSR518JGY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR518JGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518JGY/ENCSR518JGY_w_bias.bw", "name": "ENCSR518JGY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR518JGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518JGY/ENCSR518JGY_wo_bias.bw", "name": "ENCSR518JGY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR518JGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518JGY/full_ENCSR518JGY.counts.bigwig", "name": "ENCSR518JGY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR518JGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR518JGY/full_ENCSR518JGY.profile.bigwig", "name": "ENCSR518JGY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR518JGY" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin melanocyte male newborn", "biosample term name": "foreskin melanocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR625WLB/preprocessing/bigWigs/ENCSR625WLB.bigWig", "name": "ENCSR625WLB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR625WLB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR625WLB/ENCSR625WLB_w_bias.bw", "name": "ENCSR625WLB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR625WLB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR625WLB/ENCSR625WLB_wo_bias.bw", "name": "ENCSR625WLB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR625WLB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR625WLB/full_ENCSR625WLB.counts.bigwig", "name": "ENCSR625WLB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR625WLB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR625WLB/full_ENCSR625WLB.profile.bigwig", "name": "ENCSR625WLB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR625WLB" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)", "biosample term name": "CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR298SDT/preprocessing/bigWigs/ENCSR298SDT.bigWig", "name": "ENCSR298SDT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR298SDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (37 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298SDT/ENCSR298SDT_w_bias.bw", "name": "ENCSR298SDT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR298SDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (37 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298SDT/ENCSR298SDT_wo_bias.bw", "name": "ENCSR298SDT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR298SDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (37 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298SDT/full_ENCSR298SDT.counts.bigwig", "name": "ENCSR298SDT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR298SDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (37 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR298SDT/full_ENCSR298SDT.profile.bigwig", "name": "ENCSR298SDT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR298SDT" ], "assay": "DNASE", "biosample summary": "Homo sapiens thoracic aorta tissue male adult (37 years)", "biosample term name": "thoracic aorta", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR946BPA/preprocessing/bigWigs/ENCSR946BPA.bigWig", "name": "ENCSR946BPA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR946BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946BPA/ENCSR946BPA_w_bias.bw", "name": "ENCSR946BPA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR946BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946BPA/ENCSR946BPA_wo_bias.bw", "name": "ENCSR946BPA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR946BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946BPA/full_ENCSR946BPA.counts.bigwig", "name": "ENCSR946BPA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR946BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR946BPA/full_ENCSR946BPA.profile.bigwig", "name": "ENCSR946BPA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR946BPA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR546FUC/preprocessing/bigWigs/ENCSR546FUC.bigWig", "name": "ENCSR546FUC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR546FUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR546FUC/ENCSR546FUC_w_bias.bw", "name": "ENCSR546FUC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR546FUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR546FUC/ENCSR546FUC_wo_bias.bw", "name": "ENCSR546FUC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR546FUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR546FUC/full_ENCSR546FUC.counts.bigwig", "name": "ENCSR546FUC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR546FUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR546FUC/full_ENCSR546FUC.profile.bigwig", "name": "ENCSR546FUC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR546FUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR140KPO/preprocessing/bigWigs/ENCSR140KPO.bigWig", "name": "ENCSR140KPO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR140KPO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR140KPO/ENCSR140KPO_w_bias.bw", "name": "ENCSR140KPO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR140KPO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR140KPO/ENCSR140KPO_wo_bias.bw", "name": "ENCSR140KPO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR140KPO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR140KPO/full_ENCSR140KPO.counts.bigwig", "name": "ENCSR140KPO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR140KPO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR140KPO/full_ENCSR140KPO.profile.bigwig", "name": "ENCSR140KPO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR140KPO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMT/preprocessing/bigWigs/ENCSR000EMT.bigWig", "name": "ENCSR000EMT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMT" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMT/ENCSR000EMT_w_bias.bw", "name": "ENCSR000EMT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMT" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMT/ENCSR000EMT_wo_bias.bw", "name": "ENCSR000EMT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMT" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMT/full_ENCSR000EMT.counts.bigwig", "name": "ENCSR000EMT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMT" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMT/full_ENCSR000EMT.profile.bigwig", "name": "ENCSR000EMT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMT" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM12878", "biosample term name": "GM12878", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR198UKY/preprocessing/bigWigs/ENCSR198UKY.bigWig", "name": "ENCSR198UKY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR198UKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (47 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR198UKY/ENCSR198UKY_w_bias.bw", "name": "ENCSR198UKY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR198UKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (47 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR198UKY/ENCSR198UKY_wo_bias.bw", "name": "ENCSR198UKY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR198UKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (47 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR198UKY/full_ENCSR198UKY.counts.bigwig", "name": "ENCSR198UKY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR198UKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (47 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR198UKY/full_ENCSR198UKY.profile.bigwig", "name": "ENCSR198UKY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR198UKY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (47 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR129TSG/preprocessing/bigWigs/ENCSR129TSG.bigWig", "name": "ENCSR129TSG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR129TSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (108 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129TSG/ENCSR129TSG_w_bias.bw", "name": "ENCSR129TSG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129TSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (108 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129TSG/ENCSR129TSG_wo_bias.bw", "name": "ENCSR129TSG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129TSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (108 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129TSG/full_ENCSR129TSG.counts.bigwig", "name": "ENCSR129TSG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129TSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (108 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129TSG/full_ENCSR129TSG.profile.bigwig", "name": "ENCSR129TSG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129TSG" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (108 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ENM/preprocessing/bigWigs/ENCSR000ENM.bigWig", "name": "ENCSR000ENM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ENM" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENM/ENCSR000ENM_w_bias.bw", "name": "ENCSR000ENM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENM" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENM/ENCSR000ENM_wo_bias.bw", "name": "ENCSR000ENM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENM" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENM/full_ENCSR000ENM.counts.bigwig", "name": "ENCSR000ENM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENM" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENM/full_ENCSR000ENM.profile.bigwig", "name": "ENCSR000ENM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENM" ], "assay": "DNASE", "biosample summary": "Homo sapiens HCT116", "biosample term name": "HCT116", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR283MZJ/preprocessing/bigWigs/ENCSR283MZJ.bigWig", "name": "ENCSR283MZJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR283MZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283MZJ/ENCSR283MZJ_w_bias.bw", "name": "ENCSR283MZJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR283MZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283MZJ/ENCSR283MZJ_wo_bias.bw", "name": "ENCSR283MZJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR283MZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283MZJ/full_ENCSR283MZJ.counts.bigwig", "name": "ENCSR283MZJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR283MZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR283MZJ/full_ENCSR283MZJ.profile.bigwig", "name": "ENCSR283MZJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR283MZJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR346GIP/preprocessing/bigWigs/ENCSR346GIP.bigWig", "name": "ENCSR346GIP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR346GIP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346GIP/ENCSR346GIP_w_bias.bw", "name": "ENCSR346GIP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR346GIP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346GIP/ENCSR346GIP_wo_bias.bw", "name": "ENCSR346GIP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR346GIP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346GIP/full_ENCSR346GIP.counts.bigwig", "name": "ENCSR346GIP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR346GIP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR346GIP/full_ENCSR346GIP.profile.bigwig", "name": "ENCSR346GIP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR346GIP" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR290NGL/preprocessing/bigWigs/ENCSR290NGL.bigWig", "name": "ENCSR290NGL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR290NGL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR290NGL/ENCSR290NGL_w_bias.bw", "name": "ENCSR290NGL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR290NGL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR290NGL/ENCSR290NGL_wo_bias.bw", "name": "ENCSR290NGL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR290NGL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR290NGL/full_ENCSR290NGL.counts.bigwig", "name": "ENCSR290NGL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR290NGL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR290NGL/full_ENCSR290NGL.profile.bigwig", "name": "ENCSR290NGL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR290NGL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR396ZIN/preprocessing/bigWigs/ENCSR396ZIN.bigWig", "name": "ENCSR396ZIN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR396ZIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (35 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396ZIN/ENCSR396ZIN_w_bias.bw", "name": "ENCSR396ZIN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR396ZIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (35 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396ZIN/ENCSR396ZIN_wo_bias.bw", "name": "ENCSR396ZIN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR396ZIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (35 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396ZIN/full_ENCSR396ZIN.counts.bigwig", "name": "ENCSR396ZIN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR396ZIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (35 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR396ZIN/full_ENCSR396ZIN.profile.bigwig", "name": "ENCSR396ZIN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR396ZIN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (35 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR453RFW/preprocessing/bigWigs/ENCSR453RFW.bigWig", "name": "ENCSR453RFW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR453RFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (24 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR453RFW/ENCSR453RFW_w_bias.bw", "name": "ENCSR453RFW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR453RFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (24 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR453RFW/ENCSR453RFW_wo_bias.bw", "name": "ENCSR453RFW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR453RFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (24 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR453RFW/full_ENCSR453RFW.counts.bigwig", "name": "ENCSR453RFW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR453RFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (24 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR453RFW/full_ENCSR453RFW.profile.bigwig", "name": "ENCSR453RFW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR453RFW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (24 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMP/preprocessing/bigWigs/ENCSR000EMP.bigWig", "name": "ENCSR000EMP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04504", "biosample term name": "GM04504", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMP/ENCSR000EMP_w_bias.bw", "name": "ENCSR000EMP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04504", "biosample term name": "GM04504", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMP/ENCSR000EMP_wo_bias.bw", "name": "ENCSR000EMP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04504", "biosample term name": "GM04504", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMP/full_ENCSR000EMP.counts.bigwig", "name": "ENCSR000EMP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04504", "biosample term name": "GM04504", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMP/full_ENCSR000EMP.profile.bigwig", "name": "ENCSR000EMP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMP" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04504", "biosample term name": "GM04504", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR507XBY/preprocessing/bigWigs/ENCSR507XBY.bigWig", "name": "ENCSR507XBY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR507XBY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507XBY/ENCSR507XBY_w_bias.bw", "name": "ENCSR507XBY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR507XBY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507XBY/ENCSR507XBY_wo_bias.bw", "name": "ENCSR507XBY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR507XBY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507XBY/full_ENCSR507XBY.counts.bigwig", "name": "ENCSR507XBY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR507XBY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR507XBY/full_ENCSR507XBY.profile.bigwig", "name": "ENCSR507XBY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR507XBY" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR332HAD/preprocessing/bigWigs/ENCSR332HAD.bigWig", "name": "ENCSR332HAD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR332HAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (56 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR332HAD/ENCSR332HAD_w_bias.bw", "name": "ENCSR332HAD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR332HAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (56 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR332HAD/ENCSR332HAD_wo_bias.bw", "name": "ENCSR332HAD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR332HAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (56 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR332HAD/full_ENCSR332HAD.counts.bigwig", "name": "ENCSR332HAD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR332HAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (56 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR332HAD/full_ENCSR332HAD.profile.bigwig", "name": "ENCSR332HAD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR332HAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (56 years)", "biosample term name": "naive thymus-derived CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR540VTN/preprocessing/bigWigs/ENCSR540VTN.bigWig", "name": "ENCSR540VTN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR540VTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540VTN/ENCSR540VTN_w_bias.bw", "name": "ENCSR540VTN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR540VTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540VTN/ENCSR540VTN_wo_bias.bw", "name": "ENCSR540VTN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR540VTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540VTN/full_ENCSR540VTN.counts.bigwig", "name": "ENCSR540VTN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR540VTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540VTN/full_ENCSR540VTN.profile.bigwig", "name": "ENCSR540VTN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR540VTN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR398CXD/preprocessing/bigWigs/ENCSR398CXD.bigWig", "name": "ENCSR398CXD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR398CXD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (24 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR398CXD/ENCSR398CXD_w_bias.bw", "name": "ENCSR398CXD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR398CXD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (24 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR398CXD/ENCSR398CXD_wo_bias.bw", "name": "ENCSR398CXD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR398CXD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (24 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR398CXD/full_ENCSR398CXD.counts.bigwig", "name": "ENCSR398CXD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR398CXD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (24 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR398CXD/full_ENCSR398CXD.profile.bigwig", "name": "ENCSR398CXD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR398CXD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell male adult (24 years)", "biosample term name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR869JYO/preprocessing/bigWigs/ENCSR869JYO.bigWig", "name": "ENCSR869JYO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR869JYO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (42 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR869JYO/ENCSR869JYO_w_bias.bw", "name": "ENCSR869JYO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR869JYO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (42 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR869JYO/ENCSR869JYO_wo_bias.bw", "name": "ENCSR869JYO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR869JYO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (42 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR869JYO/full_ENCSR869JYO.counts.bigwig", "name": "ENCSR869JYO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR869JYO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (42 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR869JYO/full_ENCSR869JYO.profile.bigwig", "name": "ENCSR869JYO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR869JYO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (42 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMO/preprocessing/bigWigs/ENCSR000EMO.bigWig", "name": "ENCSR000EMO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04503", "biosample term name": "GM04503", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMO/ENCSR000EMO_w_bias.bw", "name": "ENCSR000EMO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04503", "biosample term name": "GM04503", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMO/ENCSR000EMO_wo_bias.bw", "name": "ENCSR000EMO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04503", "biosample term name": "GM04503", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMO/full_ENCSR000EMO.counts.bigwig", "name": "ENCSR000EMO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04503", "biosample term name": "GM04503", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMO/full_ENCSR000EMO.profile.bigwig", "name": "ENCSR000EMO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMO" ], "assay": "DNASE", "biosample summary": "Homo sapiens GM04503", "biosample term name": "GM04503", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR197ZNW/preprocessing/bigWigs/ENCSR197ZNW.bigWig", "name": "ENCSR197ZNW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR197ZNW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (24 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR197ZNW/ENCSR197ZNW_w_bias.bw", "name": "ENCSR197ZNW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR197ZNW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (24 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR197ZNW/ENCSR197ZNW_wo_bias.bw", "name": "ENCSR197ZNW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR197ZNW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (24 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR197ZNW/full_ENCSR197ZNW.counts.bigwig", "name": "ENCSR197ZNW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR197ZNW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (24 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR197ZNW/full_ENCSR197ZNW.profile.bigwig", "name": "ENCSR197ZNW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR197ZNW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell male adult (24 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ELZ/preprocessing/bigWigs/ENCSR000ELZ.bigWig", "name": "ENCSR000ELZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ELZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09309", "biosample term name": "AG09309", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELZ/ENCSR000ELZ_w_bias.bw", "name": "ENCSR000ELZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ELZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09309", "biosample term name": "AG09309", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELZ/ENCSR000ELZ_wo_bias.bw", "name": "ENCSR000ELZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ELZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09309", "biosample term name": "AG09309", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELZ/full_ENCSR000ELZ.counts.bigwig", "name": "ENCSR000ELZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ELZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09309", "biosample term name": "AG09309", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELZ/full_ENCSR000ELZ.profile.bigwig", "name": "ENCSR000ELZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ELZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09309", "biosample term name": "AG09309", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR965JHW/preprocessing/bigWigs/ENCSR965JHW.bigWig", "name": "ENCSR965JHW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR965JHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965JHW/ENCSR965JHW_w_bias.bw", "name": "ENCSR965JHW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR965JHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965JHW/ENCSR965JHW_wo_bias.bw", "name": "ENCSR965JHW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR965JHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965JHW/full_ENCSR965JHW.counts.bigwig", "name": "ENCSR965JHW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR965JHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965JHW/full_ENCSR965JHW.profile.bigwig", "name": "ENCSR965JHW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR965JHW" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR724CND/preprocessing/bigWigs/ENCSR724CND.bigWig", "name": "ENCSR724CND observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR724CND" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724CND/ENCSR724CND_w_bias.bw", "name": "ENCSR724CND DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR724CND" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724CND/ENCSR724CND_wo_bias.bw", "name": "ENCSR724CND DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR724CND" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724CND/full_ENCSR724CND.counts.bigwig", "name": "ENCSR724CND DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR724CND" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724CND/full_ENCSR724CND.profile.bigwig", "name": "ENCSR724CND DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR724CND" ], "assay": "DNASE", "biosample summary": "Homo sapiens foreskin keratinocyte male newborn", "biosample term name": "foreskin keratinocyte", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR154NOT/preprocessing/bigWigs/ENCSR154NOT.bigWig", "name": "ENCSR154NOT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR154NOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NOT/ENCSR154NOT_w_bias.bw", "name": "ENCSR154NOT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR154NOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NOT/ENCSR154NOT_wo_bias.bw", "name": "ENCSR154NOT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR154NOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NOT/full_ENCSR154NOT.counts.bigwig", "name": "ENCSR154NOT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR154NOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154NOT/full_ENCSR154NOT.profile.bigwig", "name": "ENCSR154NOT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR154NOT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR490UQP/preprocessing/bigWigs/ENCSR490UQP.bigWig", "name": "ENCSR490UQP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR490UQP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR490UQP/ENCSR490UQP_w_bias.bw", "name": "ENCSR490UQP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR490UQP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR490UQP/ENCSR490UQP_wo_bias.bw", "name": "ENCSR490UQP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR490UQP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR490UQP/full_ENCSR490UQP.counts.bigwig", "name": "ENCSR490UQP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR490UQP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR490UQP/full_ENCSR490UQP.profile.bigwig", "name": "ENCSR490UQP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR490UQP" ], "assay": "DNASE", "biosample summary": "Homo sapiens middle frontal area 46 tissue female adult (87 years)", "biosample term name": "middle frontal area 46", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR218FJD/preprocessing/bigWigs/ENCSR218FJD.bigWig", "name": "ENCSR218FJD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR218FJD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FJD/ENCSR218FJD_w_bias.bw", "name": "ENCSR218FJD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR218FJD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FJD/ENCSR218FJD_wo_bias.bw", "name": "ENCSR218FJD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR218FJD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FJD/full_ENCSR218FJD.counts.bigwig", "name": "ENCSR218FJD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR218FJD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR218FJD/full_ENCSR218FJD.profile.bigwig", "name": "ENCSR218FJD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR218FJD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (30 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR582QEW/preprocessing/bigWigs/ENCSR582QEW.bigWig", "name": "ENCSR582QEW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR582QEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR582QEW/ENCSR582QEW_w_bias.bw", "name": "ENCSR582QEW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR582QEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR582QEW/ENCSR582QEW_wo_bias.bw", "name": "ENCSR582QEW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR582QEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR582QEW/full_ENCSR582QEW.counts.bigwig", "name": "ENCSR582QEW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR582QEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR582QEW/full_ENCSR582QEW.profile.bigwig", "name": "ENCSR582QEW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR582QEW" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMH/preprocessing/bigWigs/ENCSR000EMH.bigWig", "name": "ENCSR000EMH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stromal cell of bone marrow male", "biosample term name": "stromal cell of bone marrow", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMH/ENCSR000EMH_w_bias.bw", "name": "ENCSR000EMH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stromal cell of bone marrow male", "biosample term name": "stromal cell of bone marrow", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMH/ENCSR000EMH_wo_bias.bw", "name": "ENCSR000EMH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stromal cell of bone marrow male", "biosample term name": "stromal cell of bone marrow", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMH/full_ENCSR000EMH.counts.bigwig", "name": "ENCSR000EMH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stromal cell of bone marrow male", "biosample term name": "stromal cell of bone marrow", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMH/full_ENCSR000EMH.profile.bigwig", "name": "ENCSR000EMH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stromal cell of bone marrow male", "biosample term name": "stromal cell of bone marrow", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR555DLG/preprocessing/bigWigs/ENCSR555DLG.bigWig", "name": "ENCSR555DLG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR555DLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555DLG/ENCSR555DLG_w_bias.bw", "name": "ENCSR555DLG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR555DLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555DLG/ENCSR555DLG_wo_bias.bw", "name": "ENCSR555DLG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR555DLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555DLG/full_ENCSR555DLG.counts.bigwig", "name": "ENCSR555DLG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR555DLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555DLG/full_ENCSR555DLG.profile.bigwig", "name": "ENCSR555DLG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR555DLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens with Alzheimer's disease; posterior cingulate gyrus tissue male adult (90 or above years)", "biosample term name": "posterior cingulate gyrus", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR627QIA/preprocessing/bigWigs/ENCSR627QIA.bigWig", "name": "ENCSR627QIA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR627QIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR627QIA/ENCSR627QIA_w_bias.bw", "name": "ENCSR627QIA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR627QIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR627QIA/ENCSR627QIA_wo_bias.bw", "name": "ENCSR627QIA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR627QIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR627QIA/full_ENCSR627QIA.counts.bigwig", "name": "ENCSR627QIA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR627QIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR627QIA/full_ENCSR627QIA.profile.bigwig", "name": "ENCSR627QIA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR627QIA" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR213WNV/preprocessing/bigWigs/ENCSR213WNV.bigWig", "name": "ENCSR213WNV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR213WNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR213WNV/ENCSR213WNV_w_bias.bw", "name": "ENCSR213WNV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR213WNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR213WNV/ENCSR213WNV_wo_bias.bw", "name": "ENCSR213WNV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR213WNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR213WNV/full_ENCSR213WNV.counts.bigwig", "name": "ENCSR213WNV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR213WNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR213WNV/full_ENCSR213WNV.profile.bigwig", "name": "ENCSR213WNV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR213WNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR260UJJ/preprocessing/bigWigs/ENCSR260UJJ.bigWig", "name": "ENCSR260UJJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR260UJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (42 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR260UJJ/ENCSR260UJJ_w_bias.bw", "name": "ENCSR260UJJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR260UJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (42 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR260UJJ/ENCSR260UJJ_wo_bias.bw", "name": "ENCSR260UJJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR260UJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (42 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR260UJJ/full_ENCSR260UJJ.counts.bigwig", "name": "ENCSR260UJJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR260UJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (42 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR260UJJ/full_ENCSR260UJJ.profile.bigwig", "name": "ENCSR260UJJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR260UJJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (42 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR971MMF/preprocessing/bigWigs/ENCSR971MMF.bigWig", "name": "ENCSR971MMF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR971MMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR971MMF/ENCSR971MMF_w_bias.bw", "name": "ENCSR971MMF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR971MMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR971MMF/ENCSR971MMF_wo_bias.bw", "name": "ENCSR971MMF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR971MMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR971MMF/full_ENCSR971MMF.counts.bigwig", "name": "ENCSR971MMF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR971MMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR971MMF/full_ENCSR971MMF.profile.bigwig", "name": "ENCSR971MMF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR971MMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR342OGI/preprocessing/bigWigs/ENCSR342OGI.bigWig", "name": "ENCSR342OGI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR342OGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (27 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR342OGI/ENCSR342OGI_w_bias.bw", "name": "ENCSR342OGI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR342OGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (27 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR342OGI/ENCSR342OGI_wo_bias.bw", "name": "ENCSR342OGI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR342OGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (27 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR342OGI/full_ENCSR342OGI.counts.bigwig", "name": "ENCSR342OGI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR342OGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (27 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR342OGI/full_ENCSR342OGI.profile.bigwig", "name": "ENCSR342OGI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR342OGI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (27 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR116WWW/preprocessing/bigWigs/ENCSR116WWW.bigWig", "name": "ENCSR116WWW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR116WWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue female embryo (120 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116WWW/ENCSR116WWW_w_bias.bw", "name": "ENCSR116WWW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR116WWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue female embryo (120 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116WWW/ENCSR116WWW_wo_bias.bw", "name": "ENCSR116WWW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR116WWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue female embryo (120 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116WWW/full_ENCSR116WWW.counts.bigwig", "name": "ENCSR116WWW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR116WWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue female embryo (120 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR116WWW/full_ENCSR116WWW.profile.bigwig", "name": "ENCSR116WWW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR116WWW" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue female embryo (120 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR607HIL/preprocessing/bigWigs/ENCSR607HIL.bigWig", "name": "ENCSR607HIL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR607HIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607HIL/ENCSR607HIL_w_bias.bw", "name": "ENCSR607HIL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR607HIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607HIL/ENCSR607HIL_wo_bias.bw", "name": "ENCSR607HIL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR607HIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607HIL/full_ENCSR607HIL.counts.bigwig", "name": "ENCSR607HIL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR607HIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607HIL/full_ENCSR607HIL.profile.bigwig", "name": "ENCSR607HIL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR607HIL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR933HFM/preprocessing/bigWigs/ENCSR933HFM.bigWig", "name": "ENCSR933HFM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR933HFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933HFM/ENCSR933HFM_w_bias.bw", "name": "ENCSR933HFM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR933HFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933HFM/ENCSR933HFM_wo_bias.bw", "name": "ENCSR933HFM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR933HFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933HFM/full_ENCSR933HFM.counts.bigwig", "name": "ENCSR933HFM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR933HFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933HFM/full_ENCSR933HFM.profile.bigwig", "name": "ENCSR933HFM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR933HFM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ENU/preprocessing/bigWigs/ENCSR000ENU.bigWig", "name": "ENCSR000ENU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ENU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENU/ENCSR000ENU_w_bias.bw", "name": "ENCSR000ENU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENU/ENCSR000ENU_wo_bias.bw", "name": "ENCSR000ENU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENU/full_ENCSR000ENU.counts.bigwig", "name": "ENCSR000ENU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENU/full_ENCSR000ENU.profile.bigwig", "name": "ENCSR000ENU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENU" ], "assay": "DNASE", "biosample summary": "Homo sapiens HL-60", "biosample term name": "HL-60", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR630XDN/preprocessing/bigWigs/ENCSR630XDN.bigWig", "name": "ENCSR630XDN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR630XDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (18 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR630XDN/ENCSR630XDN_w_bias.bw", "name": "ENCSR630XDN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR630XDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (18 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR630XDN/ENCSR630XDN_wo_bias.bw", "name": "ENCSR630XDN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR630XDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (18 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR630XDN/full_ENCSR630XDN.counts.bigwig", "name": "ENCSR630XDN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR630XDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (18 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR630XDN/full_ENCSR630XDN.profile.bigwig", "name": "ENCSR630XDN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR630XDN" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (18 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR803JVQ/preprocessing/bigWigs/ENCSR803JVQ.bigWig", "name": "ENCSR803JVQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR803JVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR803JVQ/ENCSR803JVQ_w_bias.bw", "name": "ENCSR803JVQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR803JVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR803JVQ/ENCSR803JVQ_wo_bias.bw", "name": "ENCSR803JVQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR803JVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR803JVQ/full_ENCSR803JVQ.counts.bigwig", "name": "ENCSR803JVQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR803JVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR803JVQ/full_ENCSR803JVQ.profile.bigwig", "name": "ENCSR803JVQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR803JVQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR107XZC/preprocessing/bigWigs/ENCSR107XZC.bigWig", "name": "ENCSR107XZC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR107XZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR107XZC/ENCSR107XZC_w_bias.bw", "name": "ENCSR107XZC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR107XZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR107XZC/ENCSR107XZC_wo_bias.bw", "name": "ENCSR107XZC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR107XZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR107XZC/full_ENCSR107XZC.counts.bigwig", "name": "ENCSR107XZC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR107XZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR107XZC/full_ENCSR107XZC.profile.bigwig", "name": "ENCSR107XZC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR107XZC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ENO/preprocessing/bigWigs/ENCSR000ENO.bigWig", "name": "ENCSR000ENO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ENO" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3 G1b phase", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENO/ENCSR000ENO_w_bias.bw", "name": "ENCSR000ENO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENO" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3 G1b phase", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENO/ENCSR000ENO_wo_bias.bw", "name": "ENCSR000ENO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENO" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3 G1b phase", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENO/full_ENCSR000ENO.counts.bigwig", "name": "ENCSR000ENO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENO" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3 G1b phase", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENO/full_ENCSR000ENO.profile.bigwig", "name": "ENCSR000ENO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENO" ], "assay": "DNASE", "biosample summary": "Homo sapiens HeLa-S3 G1b phase", "biosample term name": "HeLa-S3", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR934IKS/preprocessing/bigWigs/ENCSR934IKS.bigWig", "name": "ENCSR934IKS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR934IKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR934IKS/ENCSR934IKS_w_bias.bw", "name": "ENCSR934IKS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR934IKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR934IKS/ENCSR934IKS_wo_bias.bw", "name": "ENCSR934IKS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR934IKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR934IKS/full_ENCSR934IKS.counts.bigwig", "name": "ENCSR934IKS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR934IKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR934IKS/full_ENCSR934IKS.profile.bigwig", "name": "ENCSR934IKS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR934IKS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR930USX/preprocessing/bigWigs/ENCSR930USX.bigWig", "name": "ENCSR930USX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR930USX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930USX/ENCSR930USX_w_bias.bw", "name": "ENCSR930USX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR930USX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930USX/ENCSR930USX_wo_bias.bw", "name": "ENCSR930USX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR930USX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930USX/full_ENCSR930USX.counts.bigwig", "name": "ENCSR930USX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR930USX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR930USX/full_ENCSR930USX.profile.bigwig", "name": "ENCSR930USX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR930USX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR552TPH/preprocessing/bigWigs/ENCSR552TPH.bigWig", "name": "ENCSR552TPH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR552TPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (53 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552TPH/ENCSR552TPH_w_bias.bw", "name": "ENCSR552TPH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552TPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (53 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552TPH/ENCSR552TPH_wo_bias.bw", "name": "ENCSR552TPH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR552TPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (53 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552TPH/full_ENCSR552TPH.counts.bigwig", "name": "ENCSR552TPH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552TPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (53 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR552TPH/full_ENCSR552TPH.profile.bigwig", "name": "ENCSR552TPH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR552TPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (53 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR616AEG/preprocessing/bigWigs/ENCSR616AEG.bigWig", "name": "ENCSR616AEG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR616AEG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR616AEG/ENCSR616AEG_w_bias.bw", "name": "ENCSR616AEG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR616AEG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR616AEG/ENCSR616AEG_wo_bias.bw", "name": "ENCSR616AEG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR616AEG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR616AEG/full_ENCSR616AEG.counts.bigwig", "name": "ENCSR616AEG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR616AEG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR616AEG/full_ENCSR616AEG.profile.bigwig", "name": "ENCSR616AEG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR616AEG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR467MSP/preprocessing/bigWigs/ENCSR467MSP.bigWig", "name": "ENCSR467MSP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR467MSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (23 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467MSP/ENCSR467MSP_w_bias.bw", "name": "ENCSR467MSP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR467MSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (23 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467MSP/ENCSR467MSP_wo_bias.bw", "name": "ENCSR467MSP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR467MSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (23 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467MSP/full_ENCSR467MSP.counts.bigwig", "name": "ENCSR467MSP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR467MSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (23 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467MSP/full_ENCSR467MSP.profile.bigwig", "name": "ENCSR467MSP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR467MSP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (23 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR051CYH/preprocessing/bigWigs/ENCSR051CYH.bigWig", "name": "ENCSR051CYH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR051CYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR051CYH/ENCSR051CYH_w_bias.bw", "name": "ENCSR051CYH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR051CYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR051CYH/ENCSR051CYH_wo_bias.bw", "name": "ENCSR051CYH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR051CYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR051CYH/full_ENCSR051CYH.counts.bigwig", "name": "ENCSR051CYH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR051CYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR051CYH/full_ENCSR051CYH.profile.bigwig", "name": "ENCSR051CYH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR051CYH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (42 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR273GCF/preprocessing/bigWigs/ENCSR273GCF.bigWig", "name": "ENCSR273GCF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR273GCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273GCF/ENCSR273GCF_w_bias.bw", "name": "ENCSR273GCF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR273GCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273GCF/ENCSR273GCF_wo_bias.bw", "name": "ENCSR273GCF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR273GCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273GCF/full_ENCSR273GCF.counts.bigwig", "name": "ENCSR273GCF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR273GCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273GCF/full_ENCSR273GCF.profile.bigwig", "name": "ENCSR273GCF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR273GCF" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR878ITC/preprocessing/bigWigs/ENCSR878ITC.bigWig", "name": "ENCSR878ITC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR878ITC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR878ITC/ENCSR878ITC_w_bias.bw", "name": "ENCSR878ITC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR878ITC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR878ITC/ENCSR878ITC_wo_bias.bw", "name": "ENCSR878ITC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR878ITC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR878ITC/full_ENCSR878ITC.counts.bigwig", "name": "ENCSR878ITC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR878ITC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR878ITC/full_ENCSR878ITC.profile.bigwig", "name": "ENCSR878ITC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR878ITC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR581RSO/preprocessing/bigWigs/ENCSR581RSO.bigWig", "name": "ENCSR581RSO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR581RSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581RSO/ENCSR581RSO_w_bias.bw", "name": "ENCSR581RSO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR581RSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581RSO/ENCSR581RSO_wo_bias.bw", "name": "ENCSR581RSO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR581RSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581RSO/full_ENCSR581RSO.counts.bigwig", "name": "ENCSR581RSO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR581RSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR581RSO/full_ENCSR581RSO.profile.bigwig", "name": "ENCSR581RSO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR581RSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR155NBS/preprocessing/bigWigs/ENCSR155NBS.bigWig", "name": "ENCSR155NBS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR155NBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NBS/ENCSR155NBS_w_bias.bw", "name": "ENCSR155NBS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR155NBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NBS/ENCSR155NBS_wo_bias.bw", "name": "ENCSR155NBS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR155NBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NBS/full_ENCSR155NBS.counts.bigwig", "name": "ENCSR155NBS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR155NBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NBS/full_ENCSR155NBS.profile.bigwig", "name": "ENCSR155NBS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR155NBS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ENR/preprocessing/bigWigs/ENCSR000ENR.bigWig", "name": "ENCSR000ENR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ENR" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFF-Myc originated from foreskin fibroblast", "biosample term name": "HFF-Myc", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENR/ENCSR000ENR_w_bias.bw", "name": "ENCSR000ENR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENR" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFF-Myc originated from foreskin fibroblast", "biosample term name": "HFF-Myc", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENR/ENCSR000ENR_wo_bias.bw", "name": "ENCSR000ENR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ENR" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFF-Myc originated from foreskin fibroblast", "biosample term name": "HFF-Myc", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENR/full_ENCSR000ENR.counts.bigwig", "name": "ENCSR000ENR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENR" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFF-Myc originated from foreskin fibroblast", "biosample term name": "HFF-Myc", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ENR/full_ENCSR000ENR.profile.bigwig", "name": "ENCSR000ENR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ENR" ], "assay": "DNASE", "biosample summary": "Homo sapiens HFF-Myc originated from foreskin fibroblast", "biosample term name": "HFF-Myc", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000ELY/preprocessing/bigWigs/ENCSR000ELY.bigWig", "name": "ENCSR000ELY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG04450", "biosample term name": "AG04450", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELY/ENCSR000ELY_w_bias.bw", "name": "ENCSR000ELY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG04450", "biosample term name": "AG04450", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELY/ENCSR000ELY_wo_bias.bw", "name": "ENCSR000ELY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG04450", "biosample term name": "AG04450", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELY/full_ENCSR000ELY.counts.bigwig", "name": "ENCSR000ELY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG04450", "biosample term name": "AG04450", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000ELY/full_ENCSR000ELY.profile.bigwig", "name": "ENCSR000ELY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG04450", "biosample term name": "AG04450", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR186NTL/preprocessing/bigWigs/ENCSR186NTL.bigWig", "name": "ENCSR186NTL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR186NTL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (43 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR186NTL/ENCSR186NTL_w_bias.bw", "name": "ENCSR186NTL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR186NTL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (43 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR186NTL/ENCSR186NTL_wo_bias.bw", "name": "ENCSR186NTL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR186NTL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (43 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR186NTL/full_ENCSR186NTL.counts.bigwig", "name": "ENCSR186NTL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR186NTL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (43 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR186NTL/full_ENCSR186NTL.profile.bigwig", "name": "ENCSR186NTL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR186NTL" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (43 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPS/preprocessing/bigWigs/ENCSR000EPS.bigWig", "name": "ENCSR000EPS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPS" ], "assay": "DNASE", "biosample summary": "Homo sapiens NT2/D1", "biosample term name": "NT2/D1", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPS/ENCSR000EPS_w_bias.bw", "name": "ENCSR000EPS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPS" ], "assay": "DNASE", "biosample summary": "Homo sapiens NT2/D1", "biosample term name": "NT2/D1", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPS/ENCSR000EPS_wo_bias.bw", "name": "ENCSR000EPS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPS" ], "assay": "DNASE", "biosample summary": "Homo sapiens NT2/D1", "biosample term name": "NT2/D1", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPS/full_ENCSR000EPS.counts.bigwig", "name": "ENCSR000EPS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPS" ], "assay": "DNASE", "biosample summary": "Homo sapiens NT2/D1", "biosample term name": "NT2/D1", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPS/full_ENCSR000EPS.profile.bigwig", "name": "ENCSR000EPS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPS" ], "assay": "DNASE", "biosample summary": "Homo sapiens NT2/D1", "biosample term name": "NT2/D1", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR874DUP/preprocessing/bigWigs/ENCSR874DUP.bigWig", "name": "ENCSR874DUP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR874DUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR874DUP/ENCSR874DUP_w_bias.bw", "name": "ENCSR874DUP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR874DUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR874DUP/ENCSR874DUP_wo_bias.bw", "name": "ENCSR874DUP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR874DUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR874DUP/full_ENCSR874DUP.counts.bigwig", "name": "ENCSR874DUP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR874DUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR874DUP/full_ENCSR874DUP.profile.bigwig", "name": "ENCSR874DUP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR874DUP" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR154ZNQ/preprocessing/bigWigs/ENCSR154ZNQ.bigWig", "name": "ENCSR154ZNQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR154ZNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue female embryo (105 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154ZNQ/ENCSR154ZNQ_w_bias.bw", "name": "ENCSR154ZNQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR154ZNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue female embryo (105 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154ZNQ/ENCSR154ZNQ_wo_bias.bw", "name": "ENCSR154ZNQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR154ZNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue female embryo (105 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154ZNQ/full_ENCSR154ZNQ.counts.bigwig", "name": "ENCSR154ZNQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR154ZNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue female embryo (105 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR154ZNQ/full_ENCSR154ZNQ.profile.bigwig", "name": "ENCSR154ZNQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR154ZNQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue female embryo (105 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR010TMX/preprocessing/bigWigs/ENCSR010TMX.bigWig", "name": "ENCSR010TMX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR010TMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010TMX/ENCSR010TMX_w_bias.bw", "name": "ENCSR010TMX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR010TMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010TMX/ENCSR010TMX_wo_bias.bw", "name": "ENCSR010TMX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR010TMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010TMX/full_ENCSR010TMX.counts.bigwig", "name": "ENCSR010TMX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR010TMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR010TMX/full_ENCSR010TMX.profile.bigwig", "name": "ENCSR010TMX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR010TMX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR410IYF/preprocessing/bigWigs/ENCSR410IYF.bigWig", "name": "ENCSR410IYF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR410IYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410IYF/ENCSR410IYF_w_bias.bw", "name": "ENCSR410IYF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR410IYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410IYF/ENCSR410IYF_wo_bias.bw", "name": "ENCSR410IYF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR410IYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410IYF/full_ENCSR410IYF.counts.bigwig", "name": "ENCSR410IYF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR410IYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR410IYF/full_ENCSR410IYF.profile.bigwig", "name": "ENCSR410IYF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR410IYF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR496UER/preprocessing/bigWigs/ENCSR496UER.bigWig", "name": "ENCSR496UER observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR496UER" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UER/ENCSR496UER_w_bias.bw", "name": "ENCSR496UER DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496UER" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UER/ENCSR496UER_wo_bias.bw", "name": "ENCSR496UER DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR496UER" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UER/full_ENCSR496UER.counts.bigwig", "name": "ENCSR496UER DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496UER" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR496UER/full_ENCSR496UER.profile.bigwig", "name": "ENCSR496UER DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR496UER" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR036ELY/preprocessing/bigWigs/ENCSR036ELY.bigWig", "name": "ENCSR036ELY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR036ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR036ELY/ENCSR036ELY_w_bias.bw", "name": "ENCSR036ELY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR036ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR036ELY/ENCSR036ELY_wo_bias.bw", "name": "ENCSR036ELY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR036ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR036ELY/full_ENCSR036ELY.counts.bigwig", "name": "ENCSR036ELY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR036ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR036ELY/full_ENCSR036ELY.profile.bigwig", "name": "ENCSR036ELY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR036ELY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR384GGJ/preprocessing/bigWigs/ENCSR384GGJ.bigWig", "name": "ENCSR384GGJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR384GGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (38 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR384GGJ/ENCSR384GGJ_w_bias.bw", "name": "ENCSR384GGJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR384GGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (38 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR384GGJ/ENCSR384GGJ_wo_bias.bw", "name": "ENCSR384GGJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR384GGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (38 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR384GGJ/full_ENCSR384GGJ.counts.bigwig", "name": "ENCSR384GGJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR384GGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (38 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR384GGJ/full_ENCSR384GGJ.profile.bigwig", "name": "ENCSR384GGJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR384GGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 1 cell male adult (38 years)", "biosample term name": "T-helper 1 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR824YLD/preprocessing/bigWigs/ENCSR824YLD.bigWig", "name": "ENCSR824YLD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR824YLD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR824YLD/ENCSR824YLD_w_bias.bw", "name": "ENCSR824YLD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR824YLD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR824YLD/ENCSR824YLD_wo_bias.bw", "name": "ENCSR824YLD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR824YLD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR824YLD/full_ENCSR824YLD.counts.bigwig", "name": "ENCSR824YLD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR824YLD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR824YLD/full_ENCSR824YLD.profile.bigwig", "name": "ENCSR824YLD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR824YLD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR129HDK/preprocessing/bigWigs/ENCSR129HDK.bigWig", "name": "ENCSR129HDK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR129HDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129HDK/ENCSR129HDK_w_bias.bw", "name": "ENCSR129HDK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129HDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129HDK/ENCSR129HDK_wo_bias.bw", "name": "ENCSR129HDK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129HDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129HDK/full_ENCSR129HDK.counts.bigwig", "name": "ENCSR129HDK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129HDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129HDK/full_ENCSR129HDK.profile.bigwig", "name": "ENCSR129HDK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129HDK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR321KUC/preprocessing/bigWigs/ENCSR321KUC.bigWig", "name": "ENCSR321KUC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR321KUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR321KUC/ENCSR321KUC_w_bias.bw", "name": "ENCSR321KUC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR321KUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR321KUC/ENCSR321KUC_wo_bias.bw", "name": "ENCSR321KUC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR321KUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR321KUC/full_ENCSR321KUC.counts.bigwig", "name": "ENCSR321KUC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR321KUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR321KUC/full_ENCSR321KUC.profile.bigwig", "name": "ENCSR321KUC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR321KUC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR419OAR/preprocessing/bigWigs/ENCSR419OAR.bigWig", "name": "ENCSR419OAR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR419OAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419OAR/ENCSR419OAR_w_bias.bw", "name": "ENCSR419OAR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR419OAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419OAR/ENCSR419OAR_wo_bias.bw", "name": "ENCSR419OAR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR419OAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419OAR/full_ENCSR419OAR.counts.bigwig", "name": "ENCSR419OAR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR419OAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419OAR/full_ENCSR419OAR.profile.bigwig", "name": "ENCSR419OAR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR419OAR" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR385XHV/preprocessing/bigWigs/ENCSR385XHV.bigWig", "name": "ENCSR385XHV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR385XHV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (31 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR385XHV/ENCSR385XHV_w_bias.bw", "name": "ENCSR385XHV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR385XHV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (31 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR385XHV/ENCSR385XHV_wo_bias.bw", "name": "ENCSR385XHV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR385XHV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (31 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR385XHV/full_ENCSR385XHV.counts.bigwig", "name": "ENCSR385XHV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR385XHV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (31 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR385XHV/full_ENCSR385XHV.profile.bigwig", "name": "ENCSR385XHV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR385XHV" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (31 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR607EJV/preprocessing/bigWigs/ENCSR607EJV.bigWig", "name": "ENCSR607EJV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR607EJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607EJV/ENCSR607EJV_w_bias.bw", "name": "ENCSR607EJV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR607EJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607EJV/ENCSR607EJV_wo_bias.bw", "name": "ENCSR607EJV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR607EJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607EJV/full_ENCSR607EJV.counts.bigwig", "name": "ENCSR607EJV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR607EJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR607EJV/full_ENCSR607EJV.profile.bigwig", "name": "ENCSR607EJV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR607EJV" ], "assay": "DNASE", "biosample summary": "Homo sapiens effector memory CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "effector memory CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR120LVW/preprocessing/bigWigs/ENCSR120LVW.bigWig", "name": "ENCSR120LVW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR120LVW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (98 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR120LVW/ENCSR120LVW_w_bias.bw", "name": "ENCSR120LVW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR120LVW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (98 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR120LVW/ENCSR120LVW_wo_bias.bw", "name": "ENCSR120LVW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR120LVW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (98 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR120LVW/full_ENCSR120LVW.counts.bigwig", "name": "ENCSR120LVW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR120LVW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (98 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR120LVW/full_ENCSR120LVW.profile.bigwig", "name": "ENCSR120LVW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR120LVW" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue female embryo (98 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR442GKD/preprocessing/bigWigs/ENCSR442GKD.bigWig", "name": "ENCSR442GKD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR442GKD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442GKD/ENCSR442GKD_w_bias.bw", "name": "ENCSR442GKD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR442GKD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442GKD/ENCSR442GKD_wo_bias.bw", "name": "ENCSR442GKD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR442GKD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442GKD/full_ENCSR442GKD.counts.bigwig", "name": "ENCSR442GKD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR442GKD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442GKD/full_ENCSR442GKD.profile.bigwig", "name": "ENCSR442GKD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR442GKD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (34 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR442SDV/preprocessing/bigWigs/ENCSR442SDV.bigWig", "name": "ENCSR442SDV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR442SDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442SDV/ENCSR442SDV_w_bias.bw", "name": "ENCSR442SDV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR442SDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442SDV/ENCSR442SDV_wo_bias.bw", "name": "ENCSR442SDV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR442SDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442SDV/full_ENCSR442SDV.counts.bigwig", "name": "ENCSR442SDV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR442SDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR442SDV/full_ENCSR442SDV.profile.bigwig", "name": "ENCSR442SDV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR442SDV" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR933VOY/preprocessing/bigWigs/ENCSR933VOY.bigWig", "name": "ENCSR933VOY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR933VOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933VOY/ENCSR933VOY_w_bias.bw", "name": "ENCSR933VOY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR933VOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933VOY/ENCSR933VOY_wo_bias.bw", "name": "ENCSR933VOY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR933VOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933VOY/full_ENCSR933VOY.counts.bigwig", "name": "ENCSR933VOY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR933VOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR933VOY/full_ENCSR933VOY.profile.bigwig", "name": "ENCSR933VOY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR933VOY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR139PLJ/preprocessing/bigWigs/ENCSR139PLJ.bigWig", "name": "ENCSR139PLJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR139PLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR139PLJ/ENCSR139PLJ_w_bias.bw", "name": "ENCSR139PLJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR139PLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR139PLJ/ENCSR139PLJ_wo_bias.bw", "name": "ENCSR139PLJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR139PLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR139PLJ/full_ENCSR139PLJ.counts.bigwig", "name": "ENCSR139PLJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR139PLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR139PLJ/full_ENCSR139PLJ.profile.bigwig", "name": "ENCSR139PLJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR139PLJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPY/preprocessing/bigWigs/ENCSR000EPY.bigWig", "name": "ENCSR000EPY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-MC", "biosample term name": "SK-N-MC", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPY/ENCSR000EPY_w_bias.bw", "name": "ENCSR000EPY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-MC", "biosample term name": "SK-N-MC", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPY/ENCSR000EPY_wo_bias.bw", "name": "ENCSR000EPY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-MC", "biosample term name": "SK-N-MC", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPY/full_ENCSR000EPY.counts.bigwig", "name": "ENCSR000EPY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-MC", "biosample term name": "SK-N-MC", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPY/full_ENCSR000EPY.profile.bigwig", "name": "ENCSR000EPY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens SK-N-MC", "biosample term name": "SK-N-MC", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR810CTB/preprocessing/bigWigs/ENCSR810CTB.bigWig", "name": "ENCSR810CTB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR810CTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR810CTB/ENCSR810CTB_w_bias.bw", "name": "ENCSR810CTB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR810CTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR810CTB/ENCSR810CTB_wo_bias.bw", "name": "ENCSR810CTB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR810CTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR810CTB/full_ENCSR810CTB.counts.bigwig", "name": "ENCSR810CTB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR810CTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR810CTB/full_ENCSR810CTB.profile.bigwig", "name": "ENCSR810CTB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR810CTB" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR180KMR/preprocessing/bigWigs/ENCSR180KMR.bigWig", "name": "ENCSR180KMR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR180KMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR180KMR/ENCSR180KMR_w_bias.bw", "name": "ENCSR180KMR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR180KMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR180KMR/ENCSR180KMR_wo_bias.bw", "name": "ENCSR180KMR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR180KMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR180KMR/full_ENCSR180KMR.counts.bigwig", "name": "ENCSR180KMR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR180KMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR180KMR/full_ENCSR180KMR.profile.bigwig", "name": "ENCSR180KMR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR180KMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 50 U/mL Interleukin-2 for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR147QLU/preprocessing/bigWigs/ENCSR147QLU.bigWig", "name": "ENCSR147QLU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR147QLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR147QLU/ENCSR147QLU_w_bias.bw", "name": "ENCSR147QLU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR147QLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR147QLU/ENCSR147QLU_wo_bias.bw", "name": "ENCSR147QLU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR147QLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR147QLU/full_ENCSR147QLU.counts.bigwig", "name": "ENCSR147QLU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR147QLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR147QLU/full_ENCSR147QLU.profile.bigwig", "name": "ENCSR147QLU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR147QLU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR656QYL/preprocessing/bigWigs/ENCSR656QYL.bigWig", "name": "ENCSR656QYL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR656QYL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (103 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656QYL/ENCSR656QYL_w_bias.bw", "name": "ENCSR656QYL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR656QYL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (103 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656QYL/ENCSR656QYL_wo_bias.bw", "name": "ENCSR656QYL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR656QYL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (103 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656QYL/full_ENCSR656QYL.counts.bigwig", "name": "ENCSR656QYL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR656QYL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (103 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR656QYL/full_ENCSR656QYL.profile.bigwig", "name": "ENCSR656QYL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR656QYL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (103 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR554WUJ/preprocessing/bigWigs/ENCSR554WUJ.bigWig", "name": "ENCSR554WUJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR554WUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (103 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR554WUJ/ENCSR554WUJ_w_bias.bw", "name": "ENCSR554WUJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR554WUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (103 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR554WUJ/ENCSR554WUJ_wo_bias.bw", "name": "ENCSR554WUJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR554WUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (103 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR554WUJ/full_ENCSR554WUJ.counts.bigwig", "name": "ENCSR554WUJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR554WUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (103 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR554WUJ/full_ENCSR554WUJ.profile.bigwig", "name": "ENCSR554WUJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR554WUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (103 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR768AWY/preprocessing/bigWigs/ENCSR768AWY.bigWig", "name": "ENCSR768AWY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR768AWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR768AWY/ENCSR768AWY_w_bias.bw", "name": "ENCSR768AWY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR768AWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR768AWY/ENCSR768AWY_wo_bias.bw", "name": "ENCSR768AWY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR768AWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR768AWY/full_ENCSR768AWY.counts.bigwig", "name": "ENCSR768AWY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR768AWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR768AWY/full_ENCSR768AWY.profile.bigwig", "name": "ENCSR768AWY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR768AWY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR617NTY/preprocessing/bigWigs/ENCSR617NTY.bigWig", "name": "ENCSR617NTY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR617NTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617NTY/ENCSR617NTY_w_bias.bw", "name": "ENCSR617NTY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR617NTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617NTY/ENCSR617NTY_wo_bias.bw", "name": "ENCSR617NTY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR617NTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617NTY/full_ENCSR617NTY.counts.bigwig", "name": "ENCSR617NTY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR617NTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR617NTY/full_ENCSR617NTY.profile.bigwig", "name": "ENCSR617NTY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR617NTY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMA/preprocessing/bigWigs/ENCSR000EMA.bigWig", "name": "ENCSR000EMA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMA" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09319", "biosample term name": "AG09319", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMA/ENCSR000EMA_w_bias.bw", "name": "ENCSR000EMA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMA" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09319", "biosample term name": "AG09319", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMA/ENCSR000EMA_wo_bias.bw", "name": "ENCSR000EMA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMA" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09319", "biosample term name": "AG09319", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMA/full_ENCSR000EMA.counts.bigwig", "name": "ENCSR000EMA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMA" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09319", "biosample term name": "AG09319", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMA/full_ENCSR000EMA.profile.bigwig", "name": "ENCSR000EMA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMA" ], "assay": "DNASE", "biosample summary": "Homo sapiens AG09319", "biosample term name": "AG09319", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR240TZG/preprocessing/bigWigs/ENCSR240TZG.bigWig", "name": "ENCSR240TZG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR240TZG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TZG/ENCSR240TZG_w_bias.bw", "name": "ENCSR240TZG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR240TZG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TZG/ENCSR240TZG_wo_bias.bw", "name": "ENCSR240TZG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR240TZG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TZG/full_ENCSR240TZG.counts.bigwig", "name": "ENCSR240TZG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR240TZG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR240TZG/full_ENCSR240TZG.profile.bigwig", "name": "ENCSR240TZG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR240TZG" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR669NQZ/preprocessing/bigWigs/ENCSR669NQZ.bigWig", "name": "ENCSR669NQZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR669NQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR669NQZ/ENCSR669NQZ_w_bias.bw", "name": "ENCSR669NQZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR669NQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR669NQZ/ENCSR669NQZ_wo_bias.bw", "name": "ENCSR669NQZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR669NQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR669NQZ/full_ENCSR669NQZ.counts.bigwig", "name": "ENCSR669NQZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR669NQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR669NQZ/full_ENCSR669NQZ.profile.bigwig", "name": "ENCSR669NQZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR669NQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR310ZGQ/preprocessing/bigWigs/ENCSR310ZGQ.bigWig", "name": "ENCSR310ZGQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR310ZGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR310ZGQ/ENCSR310ZGQ_w_bias.bw", "name": "ENCSR310ZGQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR310ZGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR310ZGQ/ENCSR310ZGQ_wo_bias.bw", "name": "ENCSR310ZGQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR310ZGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR310ZGQ/full_ENCSR310ZGQ.counts.bigwig", "name": "ENCSR310ZGQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR310ZGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR310ZGQ/full_ENCSR310ZGQ.profile.bigwig", "name": "ENCSR310ZGQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR310ZGQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EQN/preprocessing/bigWigs/ENCSR000EQN.bigWig", "name": "ENCSR000EQN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens WI38 stably expressing RAF1", "biosample term name": "WI38", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQN/ENCSR000EQN_w_bias.bw", "name": "ENCSR000EQN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens WI38 stably expressing RAF1", "biosample term name": "WI38", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQN/ENCSR000EQN_wo_bias.bw", "name": "ENCSR000EQN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens WI38 stably expressing RAF1", "biosample term name": "WI38", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQN/full_ENCSR000EQN.counts.bigwig", "name": "ENCSR000EQN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens WI38 stably expressing RAF1", "biosample term name": "WI38", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQN/full_ENCSR000EQN.profile.bigwig", "name": "ENCSR000EQN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQN" ], "assay": "DNASE", "biosample summary": "Homo sapiens WI38 stably expressing RAF1", "biosample term name": "WI38", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EPT/preprocessing/bigWigs/ENCSR000EPT.bigWig", "name": "ENCSR000EPT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EPT" ], "assay": "DNASE", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPT/ENCSR000EPT_w_bias.bw", "name": "ENCSR000EPT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPT" ], "assay": "DNASE", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPT/ENCSR000EPT_wo_bias.bw", "name": "ENCSR000EPT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EPT" ], "assay": "DNASE", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPT/full_ENCSR000EPT.counts.bigwig", "name": "ENCSR000EPT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPT" ], "assay": "DNASE", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EPT/full_ENCSR000EPT.profile.bigwig", "name": "ENCSR000EPT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EPT" ], "assay": "DNASE", "biosample summary": "Homo sapiens Panc1", "biosample term name": "Panc1", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR709YRE/preprocessing/bigWigs/ENCSR709YRE.bigWig", "name": "ENCSR709YRE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR709YRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709YRE/ENCSR709YRE_w_bias.bw", "name": "ENCSR709YRE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR709YRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709YRE/ENCSR709YRE_wo_bias.bw", "name": "ENCSR709YRE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR709YRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709YRE/full_ENCSR709YRE.counts.bigwig", "name": "ENCSR709YRE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR709YRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR709YRE/full_ENCSR709YRE.profile.bigwig", "name": "ENCSR709YRE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR709YRE" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 17 cell male adult (42 years)", "biosample term name": "T-helper 17 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR441OGH/preprocessing/bigWigs/ENCSR441OGH.bigWig", "name": "ENCSR441OGH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR441OGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (87 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR441OGH/ENCSR441OGH_w_bias.bw", "name": "ENCSR441OGH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR441OGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (87 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR441OGH/ENCSR441OGH_wo_bias.bw", "name": "ENCSR441OGH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR441OGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (87 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR441OGH/full_ENCSR441OGH.counts.bigwig", "name": "ENCSR441OGH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR441OGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (87 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR441OGH/full_ENCSR441OGH.profile.bigwig", "name": "ENCSR441OGH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR441OGH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue male embryo (87 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR134BSY/preprocessing/bigWigs/ENCSR134BSY.bigWig", "name": "ENCSR134BSY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR134BSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134BSY/ENCSR134BSY_w_bias.bw", "name": "ENCSR134BSY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR134BSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134BSY/ENCSR134BSY_wo_bias.bw", "name": "ENCSR134BSY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR134BSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134BSY/full_ENCSR134BSY.counts.bigwig", "name": "ENCSR134BSY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR134BSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134BSY/full_ENCSR134BSY.profile.bigwig", "name": "ENCSR134BSY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR134BSY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR414IHC/preprocessing/bigWigs/ENCSR414IHC.bigWig", "name": "ENCSR414IHC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR414IHC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR414IHC/ENCSR414IHC_w_bias.bw", "name": "ENCSR414IHC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR414IHC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR414IHC/ENCSR414IHC_wo_bias.bw", "name": "ENCSR414IHC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR414IHC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR414IHC/full_ENCSR414IHC.counts.bigwig", "name": "ENCSR414IHC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR414IHC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR414IHC/full_ENCSR414IHC.profile.bigwig", "name": "ENCSR414IHC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR414IHC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR135XMY/preprocessing/bigWigs/ENCSR135XMY.bigWig", "name": "ENCSR135XMY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR135XMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR135XMY/ENCSR135XMY_w_bias.bw", "name": "ENCSR135XMY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR135XMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR135XMY/ENCSR135XMY_wo_bias.bw", "name": "ENCSR135XMY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR135XMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR135XMY/full_ENCSR135XMY.counts.bigwig", "name": "ENCSR135XMY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR135XMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR135XMY/full_ENCSR135XMY.profile.bigwig", "name": "ENCSR135XMY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR135XMY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR080PZL/preprocessing/bigWigs/ENCSR080PZL.bigWig", "name": "ENCSR080PZL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR080PZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (101 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR080PZL/ENCSR080PZL_w_bias.bw", "name": "ENCSR080PZL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR080PZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (101 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR080PZL/ENCSR080PZL_wo_bias.bw", "name": "ENCSR080PZL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR080PZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (101 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR080PZL/full_ENCSR080PZL.counts.bigwig", "name": "ENCSR080PZL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR080PZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (101 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR080PZL/full_ENCSR080PZL.profile.bigwig", "name": "ENCSR080PZL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR080PZL" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (101 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR025EYJ/preprocessing/bigWigs/ENCSR025EYJ.bigWig", "name": "ENCSR025EYJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR025EYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (48 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025EYJ/ENCSR025EYJ_w_bias.bw", "name": "ENCSR025EYJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR025EYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (48 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025EYJ/ENCSR025EYJ_wo_bias.bw", "name": "ENCSR025EYJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR025EYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (48 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025EYJ/full_ENCSR025EYJ.counts.bigwig", "name": "ENCSR025EYJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR025EYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (48 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR025EYJ/full_ENCSR025EYJ.profile.bigwig", "name": "ENCSR025EYJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR025EYJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (48 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR371KRY/preprocessing/bigWigs/ENCSR371KRY.bigWig", "name": "ENCSR371KRY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR371KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR371KRY/ENCSR371KRY_w_bias.bw", "name": "ENCSR371KRY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR371KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR371KRY/ENCSR371KRY_wo_bias.bw", "name": "ENCSR371KRY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR371KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR371KRY/full_ENCSR371KRY.counts.bigwig", "name": "ENCSR371KRY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR371KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR371KRY/full_ENCSR371KRY.profile.bigwig", "name": "ENCSR371KRY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR371KRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR323PWV/preprocessing/bigWigs/ENCSR323PWV.bigWig", "name": "ENCSR323PWV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR323PWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323PWV/ENCSR323PWV_w_bias.bw", "name": "ENCSR323PWV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR323PWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323PWV/ENCSR323PWV_wo_bias.bw", "name": "ENCSR323PWV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR323PWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323PWV/full_ENCSR323PWV.counts.bigwig", "name": "ENCSR323PWV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR323PWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR323PWV/full_ENCSR323PWV.profile.bigwig", "name": "ENCSR323PWV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR323PWV" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-23 for 48 hours, 100 ng/mL Interleukin-1b for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR697FME/preprocessing/bigWigs/ENCSR697FME.bigWig", "name": "ENCSR697FME observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR697FME" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR697FME/ENCSR697FME_w_bias.bw", "name": "ENCSR697FME DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR697FME" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR697FME/ENCSR697FME_wo_bias.bw", "name": "ENCSR697FME DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR697FME" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR697FME/full_ENCSR697FME.counts.bigwig", "name": "ENCSR697FME DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR697FME" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR697FME/full_ENCSR697FME.profile.bigwig", "name": "ENCSR697FME DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR697FME" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR493IQY/preprocessing/bigWigs/ENCSR493IQY.bigWig", "name": "ENCSR493IQY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR493IQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR493IQY/ENCSR493IQY_w_bias.bw", "name": "ENCSR493IQY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR493IQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR493IQY/ENCSR493IQY_wo_bias.bw", "name": "ENCSR493IQY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR493IQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR493IQY/full_ENCSR493IQY.counts.bigwig", "name": "ENCSR493IQY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR493IQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR493IQY/full_ENCSR493IQY.profile.bigwig", "name": "ENCSR493IQY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR493IQY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR133OSO/preprocessing/bigWigs/ENCSR133OSO.bigWig", "name": "ENCSR133OSO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR133OSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133OSO/ENCSR133OSO_w_bias.bw", "name": "ENCSR133OSO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133OSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133OSO/ENCSR133OSO_wo_bias.bw", "name": "ENCSR133OSO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133OSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133OSO/full_ENCSR133OSO.counts.bigwig", "name": "ENCSR133OSO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133OSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133OSO/full_ENCSR133OSO.profile.bigwig", "name": "ENCSR133OSO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133OSO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, CD25-positive, alpha-beta regulatory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated CD4-positive, CD25-positive, alpha-beta regulatory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR270JQK/preprocessing/bigWigs/ENCSR270JQK.bigWig", "name": "ENCSR270JQK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR270JQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR270JQK/ENCSR270JQK_w_bias.bw", "name": "ENCSR270JQK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR270JQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR270JQK/ENCSR270JQK_wo_bias.bw", "name": "ENCSR270JQK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR270JQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR270JQK/full_ENCSR270JQK.counts.bigwig", "name": "ENCSR270JQK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR270JQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR270JQK/full_ENCSR270JQK.profile.bigwig", "name": "ENCSR270JQK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR270JQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (40 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR389IHS/preprocessing/bigWigs/ENCSR389IHS.bigWig", "name": "ENCSR389IHS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR389IHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389IHS/ENCSR389IHS_w_bias.bw", "name": "ENCSR389IHS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR389IHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389IHS/ENCSR389IHS_wo_bias.bw", "name": "ENCSR389IHS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR389IHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389IHS/full_ENCSR389IHS.counts.bigwig", "name": "ENCSR389IHS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR389IHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389IHS/full_ENCSR389IHS.profile.bigwig", "name": "ENCSR389IHS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR389IHS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (24 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR863LZT/preprocessing/bigWigs/ENCSR863LZT.bigWig", "name": "ENCSR863LZT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR863LZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (39 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR863LZT/ENCSR863LZT_w_bias.bw", "name": "ENCSR863LZT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR863LZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (39 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR863LZT/ENCSR863LZT_wo_bias.bw", "name": "ENCSR863LZT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR863LZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (39 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR863LZT/full_ENCSR863LZT.counts.bigwig", "name": "ENCSR863LZT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR863LZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (39 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR863LZT/full_ENCSR863LZT.profile.bigwig", "name": "ENCSR863LZT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR863LZT" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (39 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR658NVL/preprocessing/bigWigs/ENCSR658NVL.bigWig", "name": "ENCSR658NVL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR658NVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658NVL/ENCSR658NVL_w_bias.bw", "name": "ENCSR658NVL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR658NVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658NVL/ENCSR658NVL_wo_bias.bw", "name": "ENCSR658NVL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR658NVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658NVL/full_ENCSR658NVL.counts.bigwig", "name": "ENCSR658NVL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR658NVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR658NVL/full_ENCSR658NVL.profile.bigwig", "name": "ENCSR658NVL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR658NVL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR305WLF/preprocessing/bigWigs/ENCSR305WLF.bigWig", "name": "ENCSR305WLF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR305WLF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WLF/ENCSR305WLF_w_bias.bw", "name": "ENCSR305WLF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR305WLF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WLF/ENCSR305WLF_wo_bias.bw", "name": "ENCSR305WLF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR305WLF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WLF/full_ENCSR305WLF.counts.bigwig", "name": "ENCSR305WLF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR305WLF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR305WLF/full_ENCSR305WLF.profile.bigwig", "name": "ENCSR305WLF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR305WLF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR788SKJ/preprocessing/bigWigs/ENCSR788SKJ.bigWig", "name": "ENCSR788SKJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR788SKJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR788SKJ/ENCSR788SKJ_w_bias.bw", "name": "ENCSR788SKJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR788SKJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR788SKJ/ENCSR788SKJ_wo_bias.bw", "name": "ENCSR788SKJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR788SKJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR788SKJ/full_ENCSR788SKJ.counts.bigwig", "name": "ENCSR788SKJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR788SKJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR788SKJ/full_ENCSR788SKJ.profile.bigwig", "name": "ENCSR788SKJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR788SKJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR555TFE/preprocessing/bigWigs/ENCSR555TFE.bigWig", "name": "ENCSR555TFE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR555TFE" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555TFE/ENCSR555TFE_w_bias.bw", "name": "ENCSR555TFE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR555TFE" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555TFE/ENCSR555TFE_wo_bias.bw", "name": "ENCSR555TFE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR555TFE" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555TFE/full_ENCSR555TFE.counts.bigwig", "name": "ENCSR555TFE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR555TFE" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR555TFE/full_ENCSR555TFE.profile.bigwig", "name": "ENCSR555TFE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR555TFE" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left quadriceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR947VPG/preprocessing/bigWigs/ENCSR947VPG.bigWig", "name": "ENCSR947VPG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR947VPG" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lung tissue male embryo (87 days)", "biosample term name": "right lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947VPG/ENCSR947VPG_w_bias.bw", "name": "ENCSR947VPG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR947VPG" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lung tissue male embryo (87 days)", "biosample term name": "right lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947VPG/ENCSR947VPG_wo_bias.bw", "name": "ENCSR947VPG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR947VPG" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lung tissue male embryo (87 days)", "biosample term name": "right lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947VPG/full_ENCSR947VPG.counts.bigwig", "name": "ENCSR947VPG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR947VPG" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lung tissue male embryo (87 days)", "biosample term name": "right lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR947VPG/full_ENCSR947VPG.profile.bigwig", "name": "ENCSR947VPG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR947VPG" ], "assay": "DNASE", "biosample summary": "Homo sapiens right lung tissue male embryo (87 days)", "biosample term name": "right lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR075MQZ/preprocessing/bigWigs/ENCSR075MQZ.bigWig", "name": "ENCSR075MQZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR075MQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR075MQZ/ENCSR075MQZ_w_bias.bw", "name": "ENCSR075MQZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR075MQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR075MQZ/ENCSR075MQZ_wo_bias.bw", "name": "ENCSR075MQZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR075MQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR075MQZ/full_ENCSR075MQZ.counts.bigwig", "name": "ENCSR075MQZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR075MQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR075MQZ/full_ENCSR075MQZ.profile.bigwig", "name": "ENCSR075MQZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR075MQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR366KPR/preprocessing/bigWigs/ENCSR366KPR.bigWig", "name": "ENCSR366KPR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR366KPR" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366KPR/ENCSR366KPR_w_bias.bw", "name": "ENCSR366KPR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR366KPR" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366KPR/ENCSR366KPR_wo_bias.bw", "name": "ENCSR366KPR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR366KPR" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366KPR/full_ENCSR366KPR.counts.bigwig", "name": "ENCSR366KPR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR366KPR" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366KPR/full_ENCSR366KPR.profile.bigwig", "name": "ENCSR366KPR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR366KPR" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR015FZF/preprocessing/bigWigs/ENCSR015FZF.bigWig", "name": "ENCSR015FZF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR015FZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR015FZF/ENCSR015FZF_w_bias.bw", "name": "ENCSR015FZF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR015FZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR015FZF/ENCSR015FZF_wo_bias.bw", "name": "ENCSR015FZF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR015FZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR015FZF/full_ENCSR015FZF.counts.bigwig", "name": "ENCSR015FZF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR015FZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR015FZF/full_ENCSR015FZF.profile.bigwig", "name": "ENCSR015FZF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR015FZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR545KQR/preprocessing/bigWigs/ENCSR545KQR.bigWig", "name": "ENCSR545KQR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR545KQR" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (105 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545KQR/ENCSR545KQR_w_bias.bw", "name": "ENCSR545KQR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR545KQR" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (105 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545KQR/ENCSR545KQR_wo_bias.bw", "name": "ENCSR545KQR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR545KQR" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (105 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545KQR/full_ENCSR545KQR.counts.bigwig", "name": "ENCSR545KQR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR545KQR" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (105 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR545KQR/full_ENCSR545KQR.profile.bigwig", "name": "ENCSR545KQR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR545KQR" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (105 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR885AWF/preprocessing/bigWigs/ENCSR885AWF.bigWig", "name": "ENCSR885AWF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR885AWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885AWF/ENCSR885AWF_w_bias.bw", "name": "ENCSR885AWF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR885AWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885AWF/ENCSR885AWF_wo_bias.bw", "name": "ENCSR885AWF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR885AWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885AWF/full_ENCSR885AWF.counts.bigwig", "name": "ENCSR885AWF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR885AWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR885AWF/full_ENCSR885AWF.profile.bigwig", "name": "ENCSR885AWF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR885AWF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR134CIY/preprocessing/bigWigs/ENCSR134CIY.bigWig", "name": "ENCSR134CIY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR134CIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134CIY/ENCSR134CIY_w_bias.bw", "name": "ENCSR134CIY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR134CIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134CIY/ENCSR134CIY_wo_bias.bw", "name": "ENCSR134CIY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR134CIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134CIY/full_ENCSR134CIY.counts.bigwig", "name": "ENCSR134CIY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR134CIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR134CIY/full_ENCSR134CIY.profile.bigwig", "name": "ENCSR134CIY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR134CIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 50 U/mL Interleukin-2 for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR206KJN/preprocessing/bigWigs/ENCSR206KJN.bigWig", "name": "ENCSR206KJN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR206KJN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206KJN/ENCSR206KJN_w_bias.bw", "name": "ENCSR206KJN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR206KJN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206KJN/ENCSR206KJN_wo_bias.bw", "name": "ENCSR206KJN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR206KJN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206KJN/full_ENCSR206KJN.counts.bigwig", "name": "ENCSR206KJN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR206KJN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR206KJN/full_ENCSR206KJN.profile.bigwig", "name": "ENCSR206KJN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR206KJN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR044JIR/preprocessing/bigWigs/ENCSR044JIR.bigWig", "name": "ENCSR044JIR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR044JIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR044JIR/ENCSR044JIR_w_bias.bw", "name": "ENCSR044JIR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR044JIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR044JIR/ENCSR044JIR_wo_bias.bw", "name": "ENCSR044JIR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR044JIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR044JIR/full_ENCSR044JIR.counts.bigwig", "name": "ENCSR044JIR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR044JIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR044JIR/full_ENCSR044JIR.profile.bigwig", "name": "ENCSR044JIR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR044JIR" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours", "biosample term name": "activated naive CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR911YVV/preprocessing/bigWigs/ENCSR911YVV.bigWig", "name": "ENCSR911YVV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR911YVV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (89 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR911YVV/ENCSR911YVV_w_bias.bw", "name": "ENCSR911YVV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR911YVV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (89 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR911YVV/ENCSR911YVV_wo_bias.bw", "name": "ENCSR911YVV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR911YVV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (89 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR911YVV/full_ENCSR911YVV.counts.bigwig", "name": "ENCSR911YVV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR911YVV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (89 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR911YVV/full_ENCSR911YVV.profile.bigwig", "name": "ENCSR911YVV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR911YVV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (89 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR605SQL/preprocessing/bigWigs/ENCSR605SQL.bigWig", "name": "ENCSR605SQL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR605SQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR605SQL/ENCSR605SQL_w_bias.bw", "name": "ENCSR605SQL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR605SQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR605SQL/ENCSR605SQL_wo_bias.bw", "name": "ENCSR605SQL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR605SQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR605SQL/full_ENCSR605SQL.counts.bigwig", "name": "ENCSR605SQL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR605SQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR605SQL/full_ENCSR605SQL.profile.bigwig", "name": "ENCSR605SQL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR605SQL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR217PZP/preprocessing/bigWigs/ENCSR217PZP.bigWig", "name": "ENCSR217PZP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR217PZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217PZP/ENCSR217PZP_w_bias.bw", "name": "ENCSR217PZP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217PZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217PZP/ENCSR217PZP_wo_bias.bw", "name": "ENCSR217PZP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217PZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217PZP/full_ENCSR217PZP.counts.bigwig", "name": "ENCSR217PZP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217PZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217PZP/full_ENCSR217PZP.profile.bigwig", "name": "ENCSR217PZP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217PZP" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (26 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR642DZF/preprocessing/bigWigs/ENCSR642DZF.bigWig", "name": "ENCSR642DZF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR642DZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642DZF/ENCSR642DZF_w_bias.bw", "name": "ENCSR642DZF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR642DZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642DZF/ENCSR642DZF_wo_bias.bw", "name": "ENCSR642DZF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR642DZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642DZF/full_ENCSR642DZF.counts.bigwig", "name": "ENCSR642DZF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR642DZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR642DZF/full_ENCSR642DZF.profile.bigwig", "name": "ENCSR642DZF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR642DZF" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (33 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR744UQK/preprocessing/bigWigs/ENCSR744UQK.bigWig", "name": "ENCSR744UQK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR744UQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR744UQK/ENCSR744UQK_w_bias.bw", "name": "ENCSR744UQK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR744UQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR744UQK/ENCSR744UQK_wo_bias.bw", "name": "ENCSR744UQK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR744UQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR744UQK/full_ENCSR744UQK.counts.bigwig", "name": "ENCSR744UQK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR744UQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR744UQK/full_ENCSR744UQK.profile.bigwig", "name": "ENCSR744UQK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR744UQK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR531AYV/preprocessing/bigWigs/ENCSR531AYV.bigWig", "name": "ENCSR531AYV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR531AYV" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531AYV/ENCSR531AYV_w_bias.bw", "name": "ENCSR531AYV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR531AYV" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531AYV/ENCSR531AYV_wo_bias.bw", "name": "ENCSR531AYV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR531AYV" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531AYV/full_ENCSR531AYV.counts.bigwig", "name": "ENCSR531AYV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR531AYV" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR531AYV/full_ENCSR531AYV.profile.bigwig", "name": "ENCSR531AYV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR531AYV" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (24 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR219KTW/preprocessing/bigWigs/ENCSR219KTW.bigWig", "name": "ENCSR219KTW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR219KTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR219KTW/ENCSR219KTW_w_bias.bw", "name": "ENCSR219KTW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR219KTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR219KTW/ENCSR219KTW_wo_bias.bw", "name": "ENCSR219KTW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR219KTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR219KTW/full_ENCSR219KTW.counts.bigwig", "name": "ENCSR219KTW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR219KTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR219KTW/full_ENCSR219KTW.profile.bigwig", "name": "ENCSR219KTW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR219KTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR715TMH/preprocessing/bigWigs/ENCSR715TMH.bigWig", "name": "ENCSR715TMH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR715TMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR715TMH/ENCSR715TMH_w_bias.bw", "name": "ENCSR715TMH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR715TMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR715TMH/ENCSR715TMH_wo_bias.bw", "name": "ENCSR715TMH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR715TMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR715TMH/full_ENCSR715TMH.counts.bigwig", "name": "ENCSR715TMH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR715TMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR715TMH/full_ENCSR715TMH.profile.bigwig", "name": "ENCSR715TMH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR715TMH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (32 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMI/preprocessing/bigWigs/ENCSR000EMI.bigWig", "name": "ENCSR000EMI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMI/ENCSR000EMI_w_bias.bw", "name": "ENCSR000EMI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMI/ENCSR000EMI_wo_bias.bw", "name": "ENCSR000EMI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMI/full_ENCSR000EMI.counts.bigwig", "name": "ENCSR000EMI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMI/full_ENCSR000EMI.profile.bigwig", "name": "ENCSR000EMI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens Caco-2", "biosample term name": "Caco-2", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMG/preprocessing/bigWigs/ENCSR000EMG.bigWig", "name": "ENCSR000EMG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMG" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-5", "biosample term name": "HS-5", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMG/ENCSR000EMG_w_bias.bw", "name": "ENCSR000EMG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMG" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-5", "biosample term name": "HS-5", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMG/ENCSR000EMG_wo_bias.bw", "name": "ENCSR000EMG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMG" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-5", "biosample term name": "HS-5", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMG/full_ENCSR000EMG.counts.bigwig", "name": "ENCSR000EMG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMG" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-5", "biosample term name": "HS-5", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMG/full_ENCSR000EMG.profile.bigwig", "name": "ENCSR000EMG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMG" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-5", "biosample term name": "HS-5", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR392GCE/preprocessing/bigWigs/ENCSR392GCE.bigWig", "name": "ENCSR392GCE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR392GCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue male embryo (120 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR392GCE/ENCSR392GCE_w_bias.bw", "name": "ENCSR392GCE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR392GCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue male embryo (120 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR392GCE/ENCSR392GCE_wo_bias.bw", "name": "ENCSR392GCE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR392GCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue male embryo (120 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR392GCE/full_ENCSR392GCE.counts.bigwig", "name": "ENCSR392GCE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR392GCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue male embryo (120 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR392GCE/full_ENCSR392GCE.profile.bigwig", "name": "ENCSR392GCE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR392GCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens heart tissue male embryo (120 days)", "biosample term name": "heart", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR965ZWZ/preprocessing/bigWigs/ENCSR965ZWZ.bigWig", "name": "ENCSR965ZWZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR965ZWZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965ZWZ/ENCSR965ZWZ_w_bias.bw", "name": "ENCSR965ZWZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR965ZWZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965ZWZ/ENCSR965ZWZ_wo_bias.bw", "name": "ENCSR965ZWZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR965ZWZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965ZWZ/full_ENCSR965ZWZ.counts.bigwig", "name": "ENCSR965ZWZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR965ZWZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR965ZWZ/full_ENCSR965ZWZ.profile.bigwig", "name": "ENCSR965ZWZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR965ZWZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR467LJT/preprocessing/bigWigs/ENCSR467LJT.bigWig", "name": "ENCSR467LJT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR467LJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467LJT/ENCSR467LJT_w_bias.bw", "name": "ENCSR467LJT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR467LJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467LJT/ENCSR467LJT_wo_bias.bw", "name": "ENCSR467LJT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR467LJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467LJT/full_ENCSR467LJT.counts.bigwig", "name": "ENCSR467LJT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR467LJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR467LJT/full_ENCSR467LJT.profile.bigwig", "name": "ENCSR467LJT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR467LJT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR357PMV/preprocessing/bigWigs/ENCSR357PMV.bigWig", "name": "ENCSR357PMV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR357PMV" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue female embryo (120 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357PMV/ENCSR357PMV_w_bias.bw", "name": "ENCSR357PMV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR357PMV" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue female embryo (120 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357PMV/ENCSR357PMV_wo_bias.bw", "name": "ENCSR357PMV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR357PMV" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue female embryo (120 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357PMV/full_ENCSR357PMV.counts.bigwig", "name": "ENCSR357PMV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR357PMV" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue female embryo (120 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR357PMV/full_ENCSR357PMV.profile.bigwig", "name": "ENCSR357PMV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR357PMV" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue female embryo (120 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR782SSS/preprocessing/bigWigs/ENCSR782SSS.bigWig", "name": "ENCSR782SSS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR782SSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male adult (34 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR782SSS/ENCSR782SSS_w_bias.bw", "name": "ENCSR782SSS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR782SSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male adult (34 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR782SSS/ENCSR782SSS_wo_bias.bw", "name": "ENCSR782SSS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR782SSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male adult (34 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR782SSS/full_ENCSR782SSS.counts.bigwig", "name": "ENCSR782SSS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR782SSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male adult (34 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR782SSS/full_ENCSR782SSS.profile.bigwig", "name": "ENCSR782SSS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR782SSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male adult (34 years)", "biosample term name": "stomach", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR757EPJ/preprocessing/bigWigs/ENCSR757EPJ.bigWig", "name": "ENCSR757EPJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR757EPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue male embryo (85 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757EPJ/ENCSR757EPJ_w_bias.bw", "name": "ENCSR757EPJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR757EPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue male embryo (85 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757EPJ/ENCSR757EPJ_wo_bias.bw", "name": "ENCSR757EPJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR757EPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue male embryo (85 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757EPJ/full_ENCSR757EPJ.counts.bigwig", "name": "ENCSR757EPJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR757EPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue male embryo (85 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR757EPJ/full_ENCSR757EPJ.profile.bigwig", "name": "ENCSR757EPJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR757EPJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue male embryo (85 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR634ZYB/preprocessing/bigWigs/ENCSR634ZYB.bigWig", "name": "ENCSR634ZYB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR634ZYB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634ZYB/ENCSR634ZYB_w_bias.bw", "name": "ENCSR634ZYB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR634ZYB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634ZYB/ENCSR634ZYB_wo_bias.bw", "name": "ENCSR634ZYB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR634ZYB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634ZYB/full_ENCSR634ZYB.counts.bigwig", "name": "ENCSR634ZYB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR634ZYB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR634ZYB/full_ENCSR634ZYB.profile.bigwig", "name": "ENCSR634ZYB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR634ZYB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-23 for 4 hours, 100 ng/mL Interleukin-1b for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR457RVC/preprocessing/bigWigs/ENCSR457RVC.bigWig", "name": "ENCSR457RVC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR457RVC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457RVC/ENCSR457RVC_w_bias.bw", "name": "ENCSR457RVC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR457RVC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457RVC/ENCSR457RVC_wo_bias.bw", "name": "ENCSR457RVC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR457RVC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457RVC/full_ENCSR457RVC.counts.bigwig", "name": "ENCSR457RVC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR457RVC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR457RVC/full_ENCSR457RVC.profile.bigwig", "name": "ENCSR457RVC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR457RVC" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (28 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR990XXC/preprocessing/bigWigs/ENCSR990XXC.bigWig", "name": "ENCSR990XXC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR990XXC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right kidney tissue male embryo (115 days)", "biosample term name": "right kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR990XXC/ENCSR990XXC_w_bias.bw", "name": "ENCSR990XXC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR990XXC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right kidney tissue male embryo (115 days)", "biosample term name": "right kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR990XXC/ENCSR990XXC_wo_bias.bw", "name": "ENCSR990XXC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR990XXC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right kidney tissue male embryo (115 days)", "biosample term name": "right kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR990XXC/full_ENCSR990XXC.counts.bigwig", "name": "ENCSR990XXC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR990XXC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right kidney tissue male embryo (115 days)", "biosample term name": "right kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR990XXC/full_ENCSR990XXC.profile.bigwig", "name": "ENCSR990XXC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR990XXC" ], "assay": "DNASE", "biosample summary": "Homo sapiens right kidney tissue male embryo (115 days)", "biosample term name": "right kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR129GCL/preprocessing/bigWigs/ENCSR129GCL.bigWig", "name": "ENCSR129GCL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR129GCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129GCL/ENCSR129GCL_w_bias.bw", "name": "ENCSR129GCL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129GCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129GCL/ENCSR129GCL_wo_bias.bw", "name": "ENCSR129GCL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129GCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129GCL/full_ENCSR129GCL.counts.bigwig", "name": "ENCSR129GCL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129GCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129GCL/full_ENCSR129GCL.profile.bigwig", "name": "ENCSR129GCL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129GCL" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR176KYD/preprocessing/bigWigs/ENCSR176KYD.bigWig", "name": "ENCSR176KYD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR176KYD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176KYD/ENCSR176KYD_w_bias.bw", "name": "ENCSR176KYD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR176KYD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176KYD/ENCSR176KYD_wo_bias.bw", "name": "ENCSR176KYD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR176KYD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176KYD/full_ENCSR176KYD.counts.bigwig", "name": "ENCSR176KYD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR176KYD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR176KYD/full_ENCSR176KYD.profile.bigwig", "name": "ENCSR176KYD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR176KYD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of abdomen male embryo (97 days)", "biosample term name": "fibroblast of skin of abdomen", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR580OAH/preprocessing/bigWigs/ENCSR580OAH.bigWig", "name": "ENCSR580OAH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR580OAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue male embryo (91 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR580OAH/ENCSR580OAH_w_bias.bw", "name": "ENCSR580OAH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR580OAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue male embryo (91 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR580OAH/ENCSR580OAH_wo_bias.bw", "name": "ENCSR580OAH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR580OAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue male embryo (91 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR580OAH/full_ENCSR580OAH.counts.bigwig", "name": "ENCSR580OAH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR580OAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue male embryo (91 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR580OAH/full_ENCSR580OAH.profile.bigwig", "name": "ENCSR580OAH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR580OAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue male embryo (91 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR315WAC/preprocessing/bigWigs/ENCSR315WAC.bigWig", "name": "ENCSR315WAC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR315WAC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR315WAC/ENCSR315WAC_w_bias.bw", "name": "ENCSR315WAC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR315WAC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR315WAC/ENCSR315WAC_wo_bias.bw", "name": "ENCSR315WAC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR315WAC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR315WAC/full_ENCSR315WAC.counts.bigwig", "name": "ENCSR315WAC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR315WAC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR315WAC/full_ENCSR315WAC.profile.bigwig", "name": "ENCSR315WAC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR315WAC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR635URJ/preprocessing/bigWigs/ENCSR635URJ.bigWig", "name": "ENCSR635URJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR635URJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635URJ/ENCSR635URJ_w_bias.bw", "name": "ENCSR635URJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635URJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635URJ/ENCSR635URJ_wo_bias.bw", "name": "ENCSR635URJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR635URJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635URJ/full_ENCSR635URJ.counts.bigwig", "name": "ENCSR635URJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635URJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR635URJ/full_ENCSR635URJ.profile.bigwig", "name": "ENCSR635URJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR635URJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (25 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR802AJE/preprocessing/bigWigs/ENCSR802AJE.bigWig", "name": "ENCSR802AJE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR802AJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802AJE/ENCSR802AJE_w_bias.bw", "name": "ENCSR802AJE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802AJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802AJE/ENCSR802AJE_wo_bias.bw", "name": "ENCSR802AJE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR802AJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802AJE/full_ENCSR802AJE.counts.bigwig", "name": "ENCSR802AJE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802AJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR802AJE/full_ENCSR802AJE.profile.bigwig", "name": "ENCSR802AJE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR802AJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue male embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR377CRU/preprocessing/bigWigs/ENCSR377CRU.bigWig", "name": "ENCSR377CRU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR377CRU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR377CRU/ENCSR377CRU_w_bias.bw", "name": "ENCSR377CRU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR377CRU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR377CRU/ENCSR377CRU_wo_bias.bw", "name": "ENCSR377CRU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR377CRU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR377CRU/full_ENCSR377CRU.counts.bigwig", "name": "ENCSR377CRU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR377CRU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR377CRU/full_ENCSR377CRU.profile.bigwig", "name": "ENCSR377CRU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR377CRU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-7 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR569ATD/preprocessing/bigWigs/ENCSR569ATD.bigWig", "name": "ENCSR569ATD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR569ATD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR569ATD/ENCSR569ATD_w_bias.bw", "name": "ENCSR569ATD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR569ATD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR569ATD/ENCSR569ATD_wo_bias.bw", "name": "ENCSR569ATD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR569ATD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR569ATD/full_ENCSR569ATD.counts.bigwig", "name": "ENCSR569ATD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR569ATD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR569ATD/full_ENCSR569ATD.profile.bigwig", "name": "ENCSR569ATD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR569ATD" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR060ZXQ/preprocessing/bigWigs/ENCSR060ZXQ.bigWig", "name": "ENCSR060ZXQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR060ZXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060ZXQ/ENCSR060ZXQ_w_bias.bw", "name": "ENCSR060ZXQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060ZXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060ZXQ/ENCSR060ZXQ_wo_bias.bw", "name": "ENCSR060ZXQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060ZXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060ZXQ/full_ENCSR060ZXQ.counts.bigwig", "name": "ENCSR060ZXQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060ZXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060ZXQ/full_ENCSR060ZXQ.profile.bigwig", "name": "ENCSR060ZXQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060ZXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR167XSQ/preprocessing/bigWigs/ENCSR167XSQ.bigWig", "name": "ENCSR167XSQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR167XSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (101 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167XSQ/ENCSR167XSQ_w_bias.bw", "name": "ENCSR167XSQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR167XSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (101 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167XSQ/ENCSR167XSQ_wo_bias.bw", "name": "ENCSR167XSQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR167XSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (101 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167XSQ/full_ENCSR167XSQ.counts.bigwig", "name": "ENCSR167XSQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR167XSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (101 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR167XSQ/full_ENCSR167XSQ.profile.bigwig", "name": "ENCSR167XSQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR167XSQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (101 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR389BWT/preprocessing/bigWigs/ENCSR389BWT.bigWig", "name": "ENCSR389BWT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR389BWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389BWT/ENCSR389BWT_w_bias.bw", "name": "ENCSR389BWT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR389BWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389BWT/ENCSR389BWT_wo_bias.bw", "name": "ENCSR389BWT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR389BWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389BWT/full_ENCSR389BWT.counts.bigwig", "name": "ENCSR389BWT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR389BWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR389BWT/full_ENCSR389BWT.profile.bigwig", "name": "ENCSR389BWT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR389BWT" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR470QCE/preprocessing/bigWigs/ENCSR470QCE.bigWig", "name": "ENCSR470QCE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR470QCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR470QCE/ENCSR470QCE_w_bias.bw", "name": "ENCSR470QCE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR470QCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR470QCE/ENCSR470QCE_wo_bias.bw", "name": "ENCSR470QCE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR470QCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR470QCE/full_ENCSR470QCE.counts.bigwig", "name": "ENCSR470QCE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR470QCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR470QCE/full_ENCSR470QCE.profile.bigwig", "name": "ENCSR470QCE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR470QCE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR562ACY/preprocessing/bigWigs/ENCSR562ACY.bigWig", "name": "ENCSR562ACY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR562ACY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562ACY/ENCSR562ACY_w_bias.bw", "name": "ENCSR562ACY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR562ACY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562ACY/ENCSR562ACY_wo_bias.bw", "name": "ENCSR562ACY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR562ACY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562ACY/full_ENCSR562ACY.counts.bigwig", "name": "ENCSR562ACY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR562ACY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR562ACY/full_ENCSR562ACY.profile.bigwig", "name": "ENCSR562ACY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR562ACY" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR840USW/preprocessing/bigWigs/ENCSR840USW.bigWig", "name": "ENCSR840USW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR840USW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840USW/ENCSR840USW_w_bias.bw", "name": "ENCSR840USW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR840USW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840USW/ENCSR840USW_wo_bias.bw", "name": "ENCSR840USW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR840USW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840USW/full_ENCSR840USW.counts.bigwig", "name": "ENCSR840USW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR840USW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840USW/full_ENCSR840USW.profile.bigwig", "name": "ENCSR840USW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR840USW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR998IXQ/preprocessing/bigWigs/ENCSR998IXQ.bigWig", "name": "ENCSR998IXQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR998IXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR998IXQ/ENCSR998IXQ_w_bias.bw", "name": "ENCSR998IXQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR998IXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR998IXQ/ENCSR998IXQ_wo_bias.bw", "name": "ENCSR998IXQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR998IXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR998IXQ/full_ENCSR998IXQ.counts.bigwig", "name": "ENCSR998IXQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR998IXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR998IXQ/full_ENCSR998IXQ.profile.bigwig", "name": "ENCSR998IXQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR998IXQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR366YTD/preprocessing/bigWigs/ENCSR366YTD.bigWig", "name": "ENCSR366YTD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR366YTD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366YTD/ENCSR366YTD_w_bias.bw", "name": "ENCSR366YTD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR366YTD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366YTD/ENCSR366YTD_wo_bias.bw", "name": "ENCSR366YTD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR366YTD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366YTD/full_ENCSR366YTD.counts.bigwig", "name": "ENCSR366YTD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR366YTD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR366YTD/full_ENCSR366YTD.profile.bigwig", "name": "ENCSR366YTD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR366YTD" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (37 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR960EVM/preprocessing/bigWigs/ENCSR960EVM.bigWig", "name": "ENCSR960EVM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR960EVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR960EVM/ENCSR960EVM_w_bias.bw", "name": "ENCSR960EVM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR960EVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR960EVM/ENCSR960EVM_wo_bias.bw", "name": "ENCSR960EVM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR960EVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR960EVM/full_ENCSR960EVM.counts.bigwig", "name": "ENCSR960EVM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR960EVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR960EVM/full_ENCSR960EVM.profile.bigwig", "name": "ENCSR960EVM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR960EVM" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMF/preprocessing/bigWigs/ENCSR000EMF.bigWig", "name": "ENCSR000EMF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-27A", "biosample term name": "HS-27A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMF/ENCSR000EMF_w_bias.bw", "name": "ENCSR000EMF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-27A", "biosample term name": "HS-27A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMF/ENCSR000EMF_wo_bias.bw", "name": "ENCSR000EMF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-27A", "biosample term name": "HS-27A", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMF/full_ENCSR000EMF.counts.bigwig", "name": "ENCSR000EMF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-27A", "biosample term name": "HS-27A", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMF/full_ENCSR000EMF.profile.bigwig", "name": "ENCSR000EMF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens HS-27A", "biosample term name": "HS-27A", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR163QXS/preprocessing/bigWigs/ENCSR163QXS.bigWig", "name": "ENCSR163QXS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR163QXS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163QXS/ENCSR163QXS_w_bias.bw", "name": "ENCSR163QXS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR163QXS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163QXS/ENCSR163QXS_wo_bias.bw", "name": "ENCSR163QXS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR163QXS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163QXS/full_ENCSR163QXS.counts.bigwig", "name": "ENCSR163QXS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR163QXS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR163QXS/full_ENCSR163QXS.profile.bigwig", "name": "ENCSR163QXS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR163QXS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR543WNA/preprocessing/bigWigs/ENCSR543WNA.bigWig", "name": "ENCSR543WNA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR543WNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543WNA/ENCSR543WNA_w_bias.bw", "name": "ENCSR543WNA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR543WNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543WNA/ENCSR543WNA_wo_bias.bw", "name": "ENCSR543WNA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR543WNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543WNA/full_ENCSR543WNA.counts.bigwig", "name": "ENCSR543WNA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR543WNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543WNA/full_ENCSR543WNA.profile.bigwig", "name": "ENCSR543WNA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR543WNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR124PXN/preprocessing/bigWigs/ENCSR124PXN.bigWig", "name": "ENCSR124PXN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR124PXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR124PXN/ENCSR124PXN_w_bias.bw", "name": "ENCSR124PXN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR124PXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR124PXN/ENCSR124PXN_wo_bias.bw", "name": "ENCSR124PXN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR124PXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR124PXN/full_ENCSR124PXN.counts.bigwig", "name": "ENCSR124PXN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR124PXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR124PXN/full_ENCSR124PXN.profile.bigwig", "name": "ENCSR124PXN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR124PXN" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR162JNV/preprocessing/bigWigs/ENCSR162JNV.bigWig", "name": "ENCSR162JNV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR162JNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR162JNV/ENCSR162JNV_w_bias.bw", "name": "ENCSR162JNV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR162JNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR162JNV/ENCSR162JNV_wo_bias.bw", "name": "ENCSR162JNV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR162JNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR162JNV/full_ENCSR162JNV.counts.bigwig", "name": "ENCSR162JNV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR162JNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR162JNV/full_ENCSR162JNV.profile.bigwig", "name": "ENCSR162JNV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR162JNV" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR731DJH/preprocessing/bigWigs/ENCSR731DJH.bigWig", "name": "ENCSR731DJH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR731DJH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731DJH/ENCSR731DJH_w_bias.bw", "name": "ENCSR731DJH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR731DJH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731DJH/ENCSR731DJH_wo_bias.bw", "name": "ENCSR731DJH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR731DJH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731DJH/full_ENCSR731DJH.counts.bigwig", "name": "ENCSR731DJH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR731DJH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR731DJH/full_ENCSR731DJH.profile.bigwig", "name": "ENCSR731DJH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR731DJH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR266NDC/preprocessing/bigWigs/ENCSR266NDC.bigWig", "name": "ENCSR266NDC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR266NDC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR266NDC/ENCSR266NDC_w_bias.bw", "name": "ENCSR266NDC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR266NDC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR266NDC/ENCSR266NDC_wo_bias.bw", "name": "ENCSR266NDC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR266NDC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR266NDC/full_ENCSR266NDC.counts.bigwig", "name": "ENCSR266NDC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR266NDC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR266NDC/full_ENCSR266NDC.profile.bigwig", "name": "ENCSR266NDC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR266NDC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR904GDU/preprocessing/bigWigs/ENCSR904GDU.bigWig", "name": "ENCSR904GDU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR904GDU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR904GDU/ENCSR904GDU_w_bias.bw", "name": "ENCSR904GDU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR904GDU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR904GDU/ENCSR904GDU_wo_bias.bw", "name": "ENCSR904GDU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR904GDU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR904GDU/full_ENCSR904GDU.counts.bigwig", "name": "ENCSR904GDU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR904GDU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR904GDU/full_ENCSR904GDU.profile.bigwig", "name": "ENCSR904GDU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR904GDU" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR486FMF/preprocessing/bigWigs/ENCSR486FMF.bigWig", "name": "ENCSR486FMF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR486FMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR486FMF/ENCSR486FMF_w_bias.bw", "name": "ENCSR486FMF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR486FMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR486FMF/ENCSR486FMF_wo_bias.bw", "name": "ENCSR486FMF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR486FMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR486FMF/full_ENCSR486FMF.counts.bigwig", "name": "ENCSR486FMF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR486FMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR486FMF/full_ENCSR486FMF.profile.bigwig", "name": "ENCSR486FMF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR486FMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR572FSS/preprocessing/bigWigs/ENCSR572FSS.bigWig", "name": "ENCSR572FSS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR572FSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572FSS/ENCSR572FSS_w_bias.bw", "name": "ENCSR572FSS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR572FSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572FSS/ENCSR572FSS_wo_bias.bw", "name": "ENCSR572FSS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR572FSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572FSS/full_ENCSR572FSS.counts.bigwig", "name": "ENCSR572FSS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR572FSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572FSS/full_ENCSR572FSS.profile.bigwig", "name": "ENCSR572FSS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR572FSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR312ZTS/preprocessing/bigWigs/ENCSR312ZTS.bigWig", "name": "ENCSR312ZTS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR312ZTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR312ZTS/ENCSR312ZTS_w_bias.bw", "name": "ENCSR312ZTS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR312ZTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR312ZTS/ENCSR312ZTS_wo_bias.bw", "name": "ENCSR312ZTS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR312ZTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR312ZTS/full_ENCSR312ZTS.counts.bigwig", "name": "ENCSR312ZTS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR312ZTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR312ZTS/full_ENCSR312ZTS.profile.bigwig", "name": "ENCSR312ZTS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR312ZTS" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR951MYM/preprocessing/bigWigs/ENCSR951MYM.bigWig", "name": "ENCSR951MYM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR951MYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR951MYM/ENCSR951MYM_w_bias.bw", "name": "ENCSR951MYM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR951MYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR951MYM/ENCSR951MYM_wo_bias.bw", "name": "ENCSR951MYM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR951MYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR951MYM/full_ENCSR951MYM.counts.bigwig", "name": "ENCSR951MYM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR951MYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR951MYM/full_ENCSR951MYM.profile.bigwig", "name": "ENCSR951MYM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR951MYM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR579DBA/preprocessing/bigWigs/ENCSR579DBA.bigWig", "name": "ENCSR579DBA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR579DBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579DBA/ENCSR579DBA_w_bias.bw", "name": "ENCSR579DBA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR579DBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579DBA/ENCSR579DBA_wo_bias.bw", "name": "ENCSR579DBA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR579DBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579DBA/full_ENCSR579DBA.counts.bigwig", "name": "ENCSR579DBA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR579DBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR579DBA/full_ENCSR579DBA.profile.bigwig", "name": "ENCSR579DBA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR579DBA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-2 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR471RHG/preprocessing/bigWigs/ENCSR471RHG.bigWig", "name": "ENCSR471RHG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR471RHG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR471RHG/ENCSR471RHG_w_bias.bw", "name": "ENCSR471RHG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR471RHG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR471RHG/ENCSR471RHG_wo_bias.bw", "name": "ENCSR471RHG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR471RHG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR471RHG/full_ENCSR471RHG.counts.bigwig", "name": "ENCSR471RHG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR471RHG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR471RHG/full_ENCSR471RHG.profile.bigwig", "name": "ENCSR471RHG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR471RHG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR837ZSS/preprocessing/bigWigs/ENCSR837ZSS.bigWig", "name": "ENCSR837ZSS observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR837ZSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR837ZSS/ENCSR837ZSS_w_bias.bw", "name": "ENCSR837ZSS DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR837ZSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR837ZSS/ENCSR837ZSS_wo_bias.bw", "name": "ENCSR837ZSS DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR837ZSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR837ZSS/full_ENCSR837ZSS.counts.bigwig", "name": "ENCSR837ZSS DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR837ZSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR837ZSS/full_ENCSR837ZSS.profile.bigwig", "name": "ENCSR837ZSS DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR837ZSS" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell female adult (19 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR419CKG/preprocessing/bigWigs/ENCSR419CKG.bigWig", "name": "ENCSR419CKG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR419CKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419CKG/ENCSR419CKG_w_bias.bw", "name": "ENCSR419CKG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR419CKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419CKG/ENCSR419CKG_wo_bias.bw", "name": "ENCSR419CKG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR419CKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419CKG/full_ENCSR419CKG.counts.bigwig", "name": "ENCSR419CKG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR419CKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419CKG/full_ENCSR419CKG.profile.bigwig", "name": "ENCSR419CKG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR419CKG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR881CRY/preprocessing/bigWigs/ENCSR881CRY.bigWig", "name": "ENCSR881CRY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR881CRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881CRY/ENCSR881CRY_w_bias.bw", "name": "ENCSR881CRY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR881CRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881CRY/ENCSR881CRY_wo_bias.bw", "name": "ENCSR881CRY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR881CRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881CRY/full_ENCSR881CRY.counts.bigwig", "name": "ENCSR881CRY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR881CRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR881CRY/full_ENCSR881CRY.profile.bigwig", "name": "ENCSR881CRY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR881CRY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR841UCZ/preprocessing/bigWigs/ENCSR841UCZ.bigWig", "name": "ENCSR841UCZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR841UCZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR841UCZ/ENCSR841UCZ_w_bias.bw", "name": "ENCSR841UCZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR841UCZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR841UCZ/ENCSR841UCZ_wo_bias.bw", "name": "ENCSR841UCZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR841UCZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR841UCZ/full_ENCSR841UCZ.counts.bigwig", "name": "ENCSR841UCZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR841UCZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR841UCZ/full_ENCSR841UCZ.profile.bigwig", "name": "ENCSR841UCZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR841UCZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR284VNJ/preprocessing/bigWigs/ENCSR284VNJ.bigWig", "name": "ENCSR284VNJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR284VNJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284VNJ/ENCSR284VNJ_w_bias.bw", "name": "ENCSR284VNJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR284VNJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284VNJ/ENCSR284VNJ_wo_bias.bw", "name": "ENCSR284VNJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR284VNJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284VNJ/full_ENCSR284VNJ.counts.bigwig", "name": "ENCSR284VNJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR284VNJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284VNJ/full_ENCSR284VNJ.profile.bigwig", "name": "ENCSR284VNJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR284VNJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-15 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR226LVB/preprocessing/bigWigs/ENCSR226LVB.bigWig", "name": "ENCSR226LVB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR226LVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR226LVB/ENCSR226LVB_w_bias.bw", "name": "ENCSR226LVB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR226LVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR226LVB/ENCSR226LVB_wo_bias.bw", "name": "ENCSR226LVB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR226LVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR226LVB/full_ENCSR226LVB.counts.bigwig", "name": "ENCSR226LVB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR226LVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR226LVB/full_ENCSR226LVB.profile.bigwig", "name": "ENCSR226LVB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR226LVB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR648RAX/preprocessing/bigWigs/ENCSR648RAX.bigWig", "name": "ENCSR648RAX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR648RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648RAX/ENCSR648RAX_w_bias.bw", "name": "ENCSR648RAX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR648RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648RAX/ENCSR648RAX_wo_bias.bw", "name": "ENCSR648RAX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR648RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648RAX/full_ENCSR648RAX.counts.bigwig", "name": "ENCSR648RAX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR648RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648RAX/full_ENCSR648RAX.profile.bigwig", "name": "ENCSR648RAX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR648RAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens placenta tissue female embryo (85 days)", "biosample term name": "placenta", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR207CQH/preprocessing/bigWigs/ENCSR207CQH.bigWig", "name": "ENCSR207CQH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR207CQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207CQH/ENCSR207CQH_w_bias.bw", "name": "ENCSR207CQH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR207CQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207CQH/ENCSR207CQH_wo_bias.bw", "name": "ENCSR207CQH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR207CQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207CQH/full_ENCSR207CQH.counts.bigwig", "name": "ENCSR207CQH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR207CQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR207CQH/full_ENCSR207CQH.profile.bigwig", "name": "ENCSR207CQH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR207CQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR303YII/preprocessing/bigWigs/ENCSR303YII.bigWig", "name": "ENCSR303YII observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR303YII" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue male embryo (96 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303YII/ENCSR303YII_w_bias.bw", "name": "ENCSR303YII DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR303YII" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue male embryo (96 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303YII/ENCSR303YII_wo_bias.bw", "name": "ENCSR303YII DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR303YII" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue male embryo (96 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303YII/full_ENCSR303YII.counts.bigwig", "name": "ENCSR303YII DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR303YII" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue male embryo (96 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR303YII/full_ENCSR303YII.profile.bigwig", "name": "ENCSR303YII DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR303YII" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of arm tissue male embryo (96 days)", "biosample term name": "muscle of arm", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR287GYT/preprocessing/bigWigs/ENCSR287GYT.bigWig", "name": "ENCSR287GYT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR287GYT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR287GYT/ENCSR287GYT_w_bias.bw", "name": "ENCSR287GYT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR287GYT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR287GYT/ENCSR287GYT_wo_bias.bw", "name": "ENCSR287GYT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR287GYT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR287GYT/full_ENCSR287GYT.counts.bigwig", "name": "ENCSR287GYT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR287GYT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR287GYT/full_ENCSR287GYT.profile.bigwig", "name": "ENCSR287GYT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR287GYT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL TNF-alpha for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR572LDG/preprocessing/bigWigs/ENCSR572LDG.bigWig", "name": "ENCSR572LDG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR572LDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (101 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572LDG/ENCSR572LDG_w_bias.bw", "name": "ENCSR572LDG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR572LDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (101 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572LDG/ENCSR572LDG_wo_bias.bw", "name": "ENCSR572LDG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR572LDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (101 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572LDG/full_ENCSR572LDG.counts.bigwig", "name": "ENCSR572LDG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR572LDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (101 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR572LDG/full_ENCSR572LDG.profile.bigwig", "name": "ENCSR572LDG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR572LDG" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue male embryo (101 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR648GDP/preprocessing/bigWigs/ENCSR648GDP.bigWig", "name": "ENCSR648GDP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR648GDP" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648GDP/ENCSR648GDP_w_bias.bw", "name": "ENCSR648GDP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR648GDP" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648GDP/ENCSR648GDP_wo_bias.bw", "name": "ENCSR648GDP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR648GDP" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648GDP/full_ENCSR648GDP.counts.bigwig", "name": "ENCSR648GDP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR648GDP" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR648GDP/full_ENCSR648GDP.profile.bigwig", "name": "ENCSR648GDP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR648GDP" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of left biceps male embryo (97 days)", "biosample term name": "fibroblast of skin of left biceps", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR515DVK/preprocessing/bigWigs/ENCSR515DVK.bigWig", "name": "ENCSR515DVK observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR515DVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515DVK/ENCSR515DVK_w_bias.bw", "name": "ENCSR515DVK DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515DVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515DVK/ENCSR515DVK_wo_bias.bw", "name": "ENCSR515DVK DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR515DVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515DVK/full_ENCSR515DVK.counts.bigwig", "name": "ENCSR515DVK DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515DVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR515DVK/full_ENCSR515DVK.profile.bigwig", "name": "ENCSR515DVK DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR515DVK" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR284GAG/preprocessing/bigWigs/ENCSR284GAG.bigWig", "name": "ENCSR284GAG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR284GAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284GAG/ENCSR284GAG_w_bias.bw", "name": "ENCSR284GAG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR284GAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284GAG/ENCSR284GAG_wo_bias.bw", "name": "ENCSR284GAG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR284GAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284GAG/full_ENCSR284GAG.counts.bigwig", "name": "ENCSR284GAG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR284GAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR284GAG/full_ENCSR284GAG.profile.bigwig", "name": "ENCSR284GAG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR284GAG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR494IWJ/preprocessing/bigWigs/ENCSR494IWJ.bigWig", "name": "ENCSR494IWJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR494IWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR494IWJ/ENCSR494IWJ_w_bias.bw", "name": "ENCSR494IWJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR494IWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR494IWJ/ENCSR494IWJ_wo_bias.bw", "name": "ENCSR494IWJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR494IWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR494IWJ/full_ENCSR494IWJ.counts.bigwig", "name": "ENCSR494IWJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR494IWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR494IWJ/full_ENCSR494IWJ.profile.bigwig", "name": "ENCSR494IWJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR494IWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR889YWJ/preprocessing/bigWigs/ENCSR889YWJ.bigWig", "name": "ENCSR889YWJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR889YWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889YWJ/ENCSR889YWJ_w_bias.bw", "name": "ENCSR889YWJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR889YWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889YWJ/ENCSR889YWJ_wo_bias.bw", "name": "ENCSR889YWJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR889YWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889YWJ/full_ENCSR889YWJ.counts.bigwig", "name": "ENCSR889YWJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR889YWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR889YWJ/full_ENCSR889YWJ.profile.bigwig", "name": "ENCSR889YWJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR889YWJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR548KXH/preprocessing/bigWigs/ENCSR548KXH.bigWig", "name": "ENCSR548KXH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR548KXH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548KXH/ENCSR548KXH_w_bias.bw", "name": "ENCSR548KXH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548KXH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548KXH/ENCSR548KXH_wo_bias.bw", "name": "ENCSR548KXH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR548KXH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548KXH/full_ENCSR548KXH.counts.bigwig", "name": "ENCSR548KXH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548KXH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR548KXH/full_ENCSR548KXH.profile.bigwig", "name": "ENCSR548KXH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR548KXH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR585CGU/preprocessing/bigWigs/ENCSR585CGU.bigWig", "name": "ENCSR585CGU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR585CGU" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR585CGU/ENCSR585CGU_w_bias.bw", "name": "ENCSR585CGU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR585CGU" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR585CGU/ENCSR585CGU_wo_bias.bw", "name": "ENCSR585CGU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR585CGU" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR585CGU/full_ENCSR585CGU.counts.bigwig", "name": "ENCSR585CGU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR585CGU" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR585CGU/full_ENCSR585CGU.profile.bigwig", "name": "ENCSR585CGU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR585CGU" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (105 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR926SNI/preprocessing/bigWigs/ENCSR926SNI.bigWig", "name": "ENCSR926SNI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR926SNI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR926SNI/ENCSR926SNI_w_bias.bw", "name": "ENCSR926SNI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR926SNI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR926SNI/ENCSR926SNI_wo_bias.bw", "name": "ENCSR926SNI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR926SNI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR926SNI/full_ENCSR926SNI.counts.bigwig", "name": "ENCSR926SNI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR926SNI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR926SNI/full_ENCSR926SNI.profile.bigwig", "name": "ENCSR926SNI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR926SNI" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR787ERP/preprocessing/bigWigs/ENCSR787ERP.bigWig", "name": "ENCSR787ERP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR787ERP" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR787ERP/ENCSR787ERP_w_bias.bw", "name": "ENCSR787ERP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR787ERP" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR787ERP/ENCSR787ERP_wo_bias.bw", "name": "ENCSR787ERP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR787ERP" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR787ERP/full_ENCSR787ERP.counts.bigwig", "name": "ENCSR787ERP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR787ERP" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR787ERP/full_ENCSR787ERP.profile.bigwig", "name": "ENCSR787ERP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR787ERP" ], "assay": "DNASE", "biosample summary": "Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell female adult (25 years)", "biosample term name": "naive thymus-derived CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR551LAH/preprocessing/bigWigs/ENCSR551LAH.bigWig", "name": "ENCSR551LAH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR551LAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR551LAH/ENCSR551LAH_w_bias.bw", "name": "ENCSR551LAH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR551LAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR551LAH/ENCSR551LAH_wo_bias.bw", "name": "ENCSR551LAH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR551LAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR551LAH/full_ENCSR551LAH.counts.bigwig", "name": "ENCSR551LAH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR551LAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR551LAH/full_ENCSR551LAH.profile.bigwig", "name": "ENCSR551LAH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR551LAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR474HQW/preprocessing/bigWigs/ENCSR474HQW.bigWig", "name": "ENCSR474HQW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR474HQW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR474HQW/ENCSR474HQW_w_bias.bw", "name": "ENCSR474HQW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR474HQW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR474HQW/ENCSR474HQW_wo_bias.bw", "name": "ENCSR474HQW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR474HQW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR474HQW/full_ENCSR474HQW.counts.bigwig", "name": "ENCSR474HQW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR474HQW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR474HQW/full_ENCSR474HQW.profile.bigwig", "name": "ENCSR474HQW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR474HQW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR943BCO/preprocessing/bigWigs/ENCSR943BCO.bigWig", "name": "ENCSR943BCO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR943BCO" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943BCO/ENCSR943BCO_w_bias.bw", "name": "ENCSR943BCO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943BCO" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943BCO/ENCSR943BCO_wo_bias.bw", "name": "ENCSR943BCO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR943BCO" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943BCO/full_ENCSR943BCO.counts.bigwig", "name": "ENCSR943BCO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943BCO" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR943BCO/full_ENCSR943BCO.profile.bigwig", "name": "ENCSR943BCO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR943BCO" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR177GYC/preprocessing/bigWigs/ENCSR177GYC.bigWig", "name": "ENCSR177GYC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR177GYC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR177GYC/ENCSR177GYC_w_bias.bw", "name": "ENCSR177GYC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR177GYC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR177GYC/ENCSR177GYC_wo_bias.bw", "name": "ENCSR177GYC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR177GYC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR177GYC/full_ENCSR177GYC.counts.bigwig", "name": "ENCSR177GYC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR177GYC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR177GYC/full_ENCSR177GYC.profile.bigwig", "name": "ENCSR177GYC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR177GYC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR608AHQ/preprocessing/bigWigs/ENCSR608AHQ.bigWig", "name": "ENCSR608AHQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR608AHQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (127 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608AHQ/ENCSR608AHQ_w_bias.bw", "name": "ENCSR608AHQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR608AHQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (127 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608AHQ/ENCSR608AHQ_wo_bias.bw", "name": "ENCSR608AHQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR608AHQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (127 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608AHQ/full_ENCSR608AHQ.counts.bigwig", "name": "ENCSR608AHQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR608AHQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (127 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR608AHQ/full_ENCSR608AHQ.profile.bigwig", "name": "ENCSR608AHQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR608AHQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (127 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR254BCA/preprocessing/bigWigs/ENCSR254BCA.bigWig", "name": "ENCSR254BCA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR254BCA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR254BCA/ENCSR254BCA_w_bias.bw", "name": "ENCSR254BCA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR254BCA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR254BCA/ENCSR254BCA_wo_bias.bw", "name": "ENCSR254BCA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR254BCA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR254BCA/full_ENCSR254BCA.counts.bigwig", "name": "ENCSR254BCA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR254BCA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR254BCA/full_ENCSR254BCA.profile.bigwig", "name": "ENCSR254BCA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR254BCA" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR217YRJ/preprocessing/bigWigs/ENCSR217YRJ.bigWig", "name": "ENCSR217YRJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR217YRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of trunk tissue female embryo (120 days)", "biosample term name": "muscle of trunk", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217YRJ/ENCSR217YRJ_w_bias.bw", "name": "ENCSR217YRJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217YRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of trunk tissue female embryo (120 days)", "biosample term name": "muscle of trunk", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217YRJ/ENCSR217YRJ_wo_bias.bw", "name": "ENCSR217YRJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR217YRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of trunk tissue female embryo (120 days)", "biosample term name": "muscle of trunk", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217YRJ/full_ENCSR217YRJ.counts.bigwig", "name": "ENCSR217YRJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217YRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of trunk tissue female embryo (120 days)", "biosample term name": "muscle of trunk", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR217YRJ/full_ENCSR217YRJ.profile.bigwig", "name": "ENCSR217YRJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR217YRJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of trunk tissue female embryo (120 days)", "biosample term name": "muscle of trunk", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR273USD/preprocessing/bigWigs/ENCSR273USD.bigWig", "name": "ENCSR273USD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR273USD" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273USD/ENCSR273USD_w_bias.bw", "name": "ENCSR273USD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR273USD" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273USD/ENCSR273USD_wo_bias.bw", "name": "ENCSR273USD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR273USD" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273USD/full_ENCSR273USD.counts.bigwig", "name": "ENCSR273USD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR273USD" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR273USD/full_ENCSR273USD.profile.bigwig", "name": "ENCSR273USD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR273USD" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR210JVF/preprocessing/bigWigs/ENCSR210JVF.bigWig", "name": "ENCSR210JVF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR210JVF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210JVF/ENCSR210JVF_w_bias.bw", "name": "ENCSR210JVF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR210JVF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210JVF/ENCSR210JVF_wo_bias.bw", "name": "ENCSR210JVF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR210JVF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210JVF/full_ENCSR210JVF.counts.bigwig", "name": "ENCSR210JVF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR210JVF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR210JVF/full_ENCSR210JVF.profile.bigwig", "name": "ENCSR210JVF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR210JVF" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-4 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR724QTW/preprocessing/bigWigs/ENCSR724QTW.bigWig", "name": "ENCSR724QTW observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR724QTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724QTW/ENCSR724QTW_w_bias.bw", "name": "ENCSR724QTW DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR724QTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724QTW/ENCSR724QTW_wo_bias.bw", "name": "ENCSR724QTW DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR724QTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724QTW/full_ENCSR724QTW.counts.bigwig", "name": "ENCSR724QTW DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR724QTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR724QTW/full_ENCSR724QTW.profile.bigwig", "name": "ENCSR724QTW DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR724QTW" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR173HPQ/preprocessing/bigWigs/ENCSR173HPQ.bigWig", "name": "ENCSR173HPQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR173HPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173HPQ/ENCSR173HPQ_w_bias.bw", "name": "ENCSR173HPQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR173HPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173HPQ/ENCSR173HPQ_wo_bias.bw", "name": "ENCSR173HPQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR173HPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173HPQ/full_ENCSR173HPQ.counts.bigwig", "name": "ENCSR173HPQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR173HPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR173HPQ/full_ENCSR173HPQ.profile.bigwig", "name": "ENCSR173HPQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR173HPQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR534OJE/preprocessing/bigWigs/ENCSR534OJE.bigWig", "name": "ENCSR534OJE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR534OJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR534OJE/ENCSR534OJE_w_bias.bw", "name": "ENCSR534OJE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR534OJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR534OJE/ENCSR534OJE_wo_bias.bw", "name": "ENCSR534OJE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR534OJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR534OJE/full_ENCSR534OJE.counts.bigwig", "name": "ENCSR534OJE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR534OJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR534OJE/full_ENCSR534OJE.profile.bigwig", "name": "ENCSR534OJE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR534OJE" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR941DTJ/preprocessing/bigWigs/ENCSR941DTJ.bigWig", "name": "ENCSR941DTJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR941DTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (108 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR941DTJ/ENCSR941DTJ_w_bias.bw", "name": "ENCSR941DTJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR941DTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (108 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR941DTJ/ENCSR941DTJ_wo_bias.bw", "name": "ENCSR941DTJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR941DTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (108 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR941DTJ/full_ENCSR941DTJ.counts.bigwig", "name": "ENCSR941DTJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR941DTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (108 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR941DTJ/full_ENCSR941DTJ.profile.bigwig", "name": "ENCSR941DTJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR941DTJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens kidney tissue female embryo (108 days)", "biosample term name": "kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR670VQZ/preprocessing/bigWigs/ENCSR670VQZ.bigWig", "name": "ENCSR670VQZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR670VQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670VQZ/ENCSR670VQZ_w_bias.bw", "name": "ENCSR670VQZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR670VQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670VQZ/ENCSR670VQZ_wo_bias.bw", "name": "ENCSR670VQZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR670VQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670VQZ/full_ENCSR670VQZ.counts.bigwig", "name": "ENCSR670VQZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR670VQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR670VQZ/full_ENCSR670VQZ.profile.bigwig", "name": "ENCSR670VQZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR670VQZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of upper back skin male embryo (97 days)", "biosample term name": "fibroblast of upper back skin", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR380TXB/preprocessing/bigWigs/ENCSR380TXB.bigWig", "name": "ENCSR380TXB observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR380TXB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR380TXB/ENCSR380TXB_w_bias.bw", "name": "ENCSR380TXB DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR380TXB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR380TXB/ENCSR380TXB_wo_bias.bw", "name": "ENCSR380TXB DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR380TXB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR380TXB/full_ENCSR380TXB.counts.bigwig", "name": "ENCSR380TXB DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR380TXB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR380TXB/full_ENCSR380TXB.profile.bigwig", "name": "ENCSR380TXB DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR380TXB" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-4 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR799MAX/preprocessing/bigWigs/ENCSR799MAX.bigWig", "name": "ENCSR799MAX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR799MAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MAX/ENCSR799MAX_w_bias.bw", "name": "ENCSR799MAX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR799MAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MAX/ENCSR799MAX_wo_bias.bw", "name": "ENCSR799MAX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR799MAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MAX/full_ENCSR799MAX.counts.bigwig", "name": "ENCSR799MAX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR799MAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR799MAX/full_ENCSR799MAX.profile.bigwig", "name": "ENCSR799MAX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR799MAX" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR679EFH/preprocessing/bigWigs/ENCSR679EFH.bigWig", "name": "ENCSR679EFH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR679EFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR679EFH/ENCSR679EFH_w_bias.bw", "name": "ENCSR679EFH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR679EFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR679EFH/ENCSR679EFH_wo_bias.bw", "name": "ENCSR679EFH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR679EFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR679EFH/full_ENCSR679EFH.counts.bigwig", "name": "ENCSR679EFH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR679EFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR679EFH/full_ENCSR679EFH.profile.bigwig", "name": "ENCSR679EFH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR679EFH" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours", "biosample term name": "activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR502GWQ/preprocessing/bigWigs/ENCSR502GWQ.bigWig", "name": "ENCSR502GWQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR502GWQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR502GWQ/ENCSR502GWQ_w_bias.bw", "name": "ENCSR502GWQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR502GWQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR502GWQ/ENCSR502GWQ_wo_bias.bw", "name": "ENCSR502GWQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR502GWQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR502GWQ/full_ENCSR502GWQ.counts.bigwig", "name": "ENCSR502GWQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR502GWQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR502GWQ/full_ENCSR502GWQ.profile.bigwig", "name": "ENCSR502GWQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR502GWQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-2 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR155NPL/preprocessing/bigWigs/ENCSR155NPL.bigWig", "name": "ENCSR155NPL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR155NPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (113 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NPL/ENCSR155NPL_w_bias.bw", "name": "ENCSR155NPL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR155NPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (113 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NPL/ENCSR155NPL_wo_bias.bw", "name": "ENCSR155NPL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR155NPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (113 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NPL/full_ENCSR155NPL.counts.bigwig", "name": "ENCSR155NPL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR155NPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (113 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR155NPL/full_ENCSR155NPL.profile.bigwig", "name": "ENCSR155NPL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR155NPL" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (113 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR133SPH/preprocessing/bigWigs/ENCSR133SPH.bigWig", "name": "ENCSR133SPH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR133SPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (120 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133SPH/ENCSR133SPH_w_bias.bw", "name": "ENCSR133SPH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133SPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (120 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133SPH/ENCSR133SPH_wo_bias.bw", "name": "ENCSR133SPH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR133SPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (120 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133SPH/full_ENCSR133SPH.counts.bigwig", "name": "ENCSR133SPH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133SPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (120 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR133SPH/full_ENCSR133SPH.profile.bigwig", "name": "ENCSR133SPH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR133SPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (120 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR832THJ/preprocessing/bigWigs/ENCSR832THJ.bigWig", "name": "ENCSR832THJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR832THJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832THJ/ENCSR832THJ_w_bias.bw", "name": "ENCSR832THJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR832THJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832THJ/ENCSR832THJ_wo_bias.bw", "name": "ENCSR832THJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR832THJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832THJ/full_ENCSR832THJ.counts.bigwig", "name": "ENCSR832THJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR832THJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR832THJ/full_ENCSR832THJ.profile.bigwig", "name": "ENCSR832THJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR832THJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR258IBL/preprocessing/bigWigs/ENCSR258IBL.bigWig", "name": "ENCSR258IBL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR258IBL" ], "assay": "DNASE", "biosample summary": "Homo sapiens left renal pelvis tissue male embryo (105 days)", "biosample term name": "left renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258IBL/ENCSR258IBL_w_bias.bw", "name": "ENCSR258IBL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258IBL" ], "assay": "DNASE", "biosample summary": "Homo sapiens left renal pelvis tissue male embryo (105 days)", "biosample term name": "left renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258IBL/ENCSR258IBL_wo_bias.bw", "name": "ENCSR258IBL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR258IBL" ], "assay": "DNASE", "biosample summary": "Homo sapiens left renal pelvis tissue male embryo (105 days)", "biosample term name": "left renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258IBL/full_ENCSR258IBL.counts.bigwig", "name": "ENCSR258IBL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258IBL" ], "assay": "DNASE", "biosample summary": "Homo sapiens left renal pelvis tissue male embryo (105 days)", "biosample term name": "left renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR258IBL/full_ENCSR258IBL.profile.bigwig", "name": "ENCSR258IBL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR258IBL" ], "assay": "DNASE", "biosample summary": "Homo sapiens left renal pelvis tissue male embryo (105 days)", "biosample term name": "left renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR984HIY/preprocessing/bigWigs/ENCSR984HIY.bigWig", "name": "ENCSR984HIY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR984HIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HIY/ENCSR984HIY_w_bias.bw", "name": "ENCSR984HIY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984HIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HIY/ENCSR984HIY_wo_bias.bw", "name": "ENCSR984HIY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR984HIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HIY/full_ENCSR984HIY.counts.bigwig", "name": "ENCSR984HIY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984HIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR984HIY/full_ENCSR984HIY.profile.bigwig", "name": "ENCSR984HIY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR984HIY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR072NBR/preprocessing/bigWigs/ENCSR072NBR.bigWig", "name": "ENCSR072NBR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR072NBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (98 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR072NBR/ENCSR072NBR_w_bias.bw", "name": "ENCSR072NBR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR072NBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (98 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR072NBR/ENCSR072NBR_wo_bias.bw", "name": "ENCSR072NBR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR072NBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (98 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR072NBR/full_ENCSR072NBR.counts.bigwig", "name": "ENCSR072NBR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR072NBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (98 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR072NBR/full_ENCSR072NBR.profile.bigwig", "name": "ENCSR072NBR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR072NBR" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of back tissue female embryo (98 days)", "biosample term name": "muscle of back", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR970ZLG/preprocessing/bigWigs/ENCSR970ZLG.bigWig", "name": "ENCSR970ZLG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR970ZLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (87 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR970ZLG/ENCSR970ZLG_w_bias.bw", "name": "ENCSR970ZLG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR970ZLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (87 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR970ZLG/ENCSR970ZLG_wo_bias.bw", "name": "ENCSR970ZLG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR970ZLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (87 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR970ZLG/full_ENCSR970ZLG.counts.bigwig", "name": "ENCSR970ZLG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR970ZLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (87 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR970ZLG/full_ENCSR970ZLG.profile.bigwig", "name": "ENCSR970ZLG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR970ZLG" ], "assay": "DNASE", "biosample summary": "Homo sapiens small intestine tissue male embryo (87 days)", "biosample term name": "small intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR728BAD/preprocessing/bigWigs/ENCSR728BAD.bigWig", "name": "ENCSR728BAD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR728BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR728BAD/ENCSR728BAD_w_bias.bw", "name": "ENCSR728BAD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR728BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR728BAD/ENCSR728BAD_wo_bias.bw", "name": "ENCSR728BAD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR728BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR728BAD/full_ENCSR728BAD.counts.bigwig", "name": "ENCSR728BAD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR728BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR728BAD/full_ENCSR728BAD.profile.bigwig", "name": "ENCSR728BAD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR728BAD" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue male embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR019MZH/preprocessing/bigWigs/ENCSR019MZH.bigWig", "name": "ENCSR019MZH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR019MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019MZH/ENCSR019MZH_w_bias.bw", "name": "ENCSR019MZH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR019MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019MZH/ENCSR019MZH_wo_bias.bw", "name": "ENCSR019MZH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR019MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019MZH/full_ENCSR019MZH.counts.bigwig", "name": "ENCSR019MZH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR019MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR019MZH/full_ENCSR019MZH.profile.bigwig", "name": "ENCSR019MZH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR019MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR335EYA/preprocessing/bigWigs/ENCSR335EYA.bigWig", "name": "ENCSR335EYA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR335EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-12 subunit alpha for 1 hour, 100 ng/mL Interleukin-12 subunit beta for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335EYA/ENCSR335EYA_w_bias.bw", "name": "ENCSR335EYA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-12 subunit alpha for 1 hour, 100 ng/mL Interleukin-12 subunit beta for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335EYA/ENCSR335EYA_wo_bias.bw", "name": "ENCSR335EYA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-12 subunit alpha for 1 hour, 100 ng/mL Interleukin-12 subunit beta for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335EYA/full_ENCSR335EYA.counts.bigwig", "name": "ENCSR335EYA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-12 subunit alpha for 1 hour, 100 ng/mL Interleukin-12 subunit beta for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335EYA/full_ENCSR335EYA.profile.bigwig", "name": "ENCSR335EYA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335EYA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-12 subunit alpha for 1 hour, 100 ng/mL Interleukin-12 subunit beta for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR884ODJ/preprocessing/bigWigs/ENCSR884ODJ.bigWig", "name": "ENCSR884ODJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR884ODJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR884ODJ/ENCSR884ODJ_w_bias.bw", "name": "ENCSR884ODJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR884ODJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR884ODJ/ENCSR884ODJ_wo_bias.bw", "name": "ENCSR884ODJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR884ODJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR884ODJ/full_ENCSR884ODJ.counts.bigwig", "name": "ENCSR884ODJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR884ODJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR884ODJ/full_ENCSR884ODJ.profile.bigwig", "name": "ENCSR884ODJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR884ODJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-12 subunit alpha for 48 hours, 100 ng/mL Interleukin-12 subunit beta for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR838IPF/preprocessing/bigWigs/ENCSR838IPF.bigWig", "name": "ENCSR838IPF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR838IPF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (105 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR838IPF/ENCSR838IPF_w_bias.bw", "name": "ENCSR838IPF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR838IPF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (105 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR838IPF/ENCSR838IPF_wo_bias.bw", "name": "ENCSR838IPF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR838IPF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (105 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR838IPF/full_ENCSR838IPF.counts.bigwig", "name": "ENCSR838IPF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR838IPF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (105 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR838IPF/full_ENCSR838IPF.profile.bigwig", "name": "ENCSR838IPF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR838IPF" ], "assay": "DNASE", "biosample summary": "Homo sapiens thymus tissue female embryo (105 days)", "biosample term name": "thymus", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EQH/preprocessing/bigWigs/ENCSR000EQH.bigWig", "name": "ENCSR000EQH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell female adult (26 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQH/ENCSR000EQH_w_bias.bw", "name": "ENCSR000EQH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell female adult (26 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQH/ENCSR000EQH_wo_bias.bw", "name": "ENCSR000EQH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell female adult (26 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQH/full_ENCSR000EQH.counts.bigwig", "name": "ENCSR000EQH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell female adult (26 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EQH/full_ENCSR000EQH.profile.bigwig", "name": "ENCSR000EQH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EQH" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-helper 2 cell female adult (26 years)", "biosample term name": "T-helper 2 cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR022ECC/preprocessing/bigWigs/ENCSR022ECC.bigWig", "name": "ENCSR022ECC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR022ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022ECC/ENCSR022ECC_w_bias.bw", "name": "ENCSR022ECC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR022ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022ECC/ENCSR022ECC_wo_bias.bw", "name": "ENCSR022ECC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR022ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022ECC/full_ENCSR022ECC.counts.bigwig", "name": "ENCSR022ECC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR022ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR022ECC/full_ENCSR022ECC.profile.bigwig", "name": "ENCSR022ECC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR022ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue female embryo (96 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR360LBD/preprocessing/bigWigs/ENCSR360LBD.bigWig", "name": "ENCSR360LBD observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR360LBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR360LBD/ENCSR360LBD_w_bias.bw", "name": "ENCSR360LBD DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR360LBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR360LBD/ENCSR360LBD_wo_bias.bw", "name": "ENCSR360LBD DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR360LBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR360LBD/full_ENCSR360LBD.counts.bigwig", "name": "ENCSR360LBD DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR360LBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR360LBD/full_ENCSR360LBD.profile.bigwig", "name": "ENCSR360LBD DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR360LBD" ], "assay": "DNASE", "biosample summary": "Homo sapiens fibroblast of skin of scalp male embryo (97 days)", "biosample term name": "fibroblast of skin of scalp", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR860IDO/preprocessing/bigWigs/ENCSR860IDO.bigWig", "name": "ENCSR860IDO observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR860IDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860IDO/ENCSR860IDO_w_bias.bw", "name": "ENCSR860IDO DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR860IDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860IDO/ENCSR860IDO_wo_bias.bw", "name": "ENCSR860IDO DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR860IDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860IDO/full_ENCSR860IDO.counts.bigwig", "name": "ENCSR860IDO DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR860IDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR860IDO/full_ENCSR860IDO.profile.bigwig", "name": "ENCSR860IDO DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR860IDO" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR419MZH/preprocessing/bigWigs/ENCSR419MZH.bigWig", "name": "ENCSR419MZH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR419MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419MZH/ENCSR419MZH_w_bias.bw", "name": "ENCSR419MZH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR419MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419MZH/ENCSR419MZH_wo_bias.bw", "name": "ENCSR419MZH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR419MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419MZH/full_ENCSR419MZH.counts.bigwig", "name": "ENCSR419MZH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR419MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR419MZH/full_ENCSR419MZH.profile.bigwig", "name": "ENCSR419MZH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR419MZH" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (108 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR097AMI/preprocessing/bigWigs/ENCSR097AMI.bigWig", "name": "ENCSR097AMI observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR097AMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097AMI/ENCSR097AMI_w_bias.bw", "name": "ENCSR097AMI DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR097AMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097AMI/ENCSR097AMI_wo_bias.bw", "name": "ENCSR097AMI DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR097AMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097AMI/full_ENCSR097AMI.counts.bigwig", "name": "ENCSR097AMI DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR097AMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR097AMI/full_ENCSR097AMI.profile.bigwig", "name": "ENCSR097AMI DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR097AMI" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR953UJL/preprocessing/bigWigs/ENCSR953UJL.bigWig", "name": "ENCSR953UJL observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR953UJL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR953UJL/ENCSR953UJL_w_bias.bw", "name": "ENCSR953UJL DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR953UJL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR953UJL/ENCSR953UJL_wo_bias.bw", "name": "ENCSR953UJL DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR953UJL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR953UJL/full_ENCSR953UJL.counts.bigwig", "name": "ENCSR953UJL DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR953UJL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR953UJL/full_ENCSR953UJL.profile.bigwig", "name": "ENCSR953UJL DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR953UJL" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-12 subunit alpha for 4 hours, 100 ng/mL Interleukin-12 subunit beta for 4 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMN/preprocessing/bigWigs/ENCSR000EMN.bigWig", "name": "ENCSR000EMN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CMK", "biosample term name": "CMK", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMN/ENCSR000EMN_w_bias.bw", "name": "ENCSR000EMN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CMK", "biosample term name": "CMK", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMN/ENCSR000EMN_wo_bias.bw", "name": "ENCSR000EMN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CMK", "biosample term name": "CMK", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMN/full_ENCSR000EMN.counts.bigwig", "name": "ENCSR000EMN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CMK", "biosample term name": "CMK", "life stage": "child" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMN/full_ENCSR000EMN.profile.bigwig", "name": "ENCSR000EMN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMN" ], "assay": "DNASE", "biosample summary": "Homo sapiens CMK", "biosample term name": "CMK", "life stage": "child" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR314IBN/preprocessing/bigWigs/ENCSR314IBN.bigWig", "name": "ENCSR314IBN observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR314IBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-7 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IBN/ENCSR314IBN_w_bias.bw", "name": "ENCSR314IBN DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR314IBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-7 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IBN/ENCSR314IBN_wo_bias.bw", "name": "ENCSR314IBN DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR314IBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-7 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IBN/full_ENCSR314IBN.counts.bigwig", "name": "ENCSR314IBN DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR314IBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-7 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR314IBN/full_ENCSR314IBN.profile.bigwig", "name": "ENCSR314IBN DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR314IBN" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-7 for 1 hour", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR735MJZ/preprocessing/bigWigs/ENCSR735MJZ.bigWig", "name": "ENCSR735MJZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR735MJZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735MJZ/ENCSR735MJZ_w_bias.bw", "name": "ENCSR735MJZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR735MJZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735MJZ/ENCSR735MJZ_wo_bias.bw", "name": "ENCSR735MJZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR735MJZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735MJZ/full_ENCSR735MJZ.counts.bigwig", "name": "ENCSR735MJZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR735MJZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR735MJZ/full_ENCSR735MJZ.profile.bigwig", "name": "ENCSR735MJZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR735MJZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-4 for 4 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR866RCY/preprocessing/bigWigs/ENCSR866RCY.bigWig", "name": "ENCSR866RCY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR866RCY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (85 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866RCY/ENCSR866RCY_w_bias.bw", "name": "ENCSR866RCY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR866RCY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (85 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866RCY/ENCSR866RCY_wo_bias.bw", "name": "ENCSR866RCY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR866RCY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (85 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866RCY/full_ENCSR866RCY.counts.bigwig", "name": "ENCSR866RCY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR866RCY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (85 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR866RCY/full_ENCSR866RCY.profile.bigwig", "name": "ENCSR866RCY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR866RCY" ], "assay": "DNASE", "biosample summary": "Homo sapiens adrenal gland tissue female embryo (85 days)", "biosample term name": "adrenal gland", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR543YPH/preprocessing/bigWigs/ENCSR543YPH.bigWig", "name": "ENCSR543YPH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR543YPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue male embryo (115 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543YPH/ENCSR543YPH_w_bias.bw", "name": "ENCSR543YPH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR543YPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue male embryo (115 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543YPH/ENCSR543YPH_wo_bias.bw", "name": "ENCSR543YPH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR543YPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue male embryo (115 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543YPH/full_ENCSR543YPH.counts.bigwig", "name": "ENCSR543YPH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR543YPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue male embryo (115 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR543YPH/full_ENCSR543YPH.profile.bigwig", "name": "ENCSR543YPH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR543YPH" ], "assay": "DNASE", "biosample summary": "Homo sapiens left kidney tissue male embryo (115 days)", "biosample term name": "left kidney", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR622CAH/preprocessing/bigWigs/ENCSR622CAH.bigWig", "name": "ENCSR622CAH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR622CAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (127 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622CAH/ENCSR622CAH_w_bias.bw", "name": "ENCSR622CAH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR622CAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (127 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622CAH/ENCSR622CAH_wo_bias.bw", "name": "ENCSR622CAH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR622CAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (127 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622CAH/full_ENCSR622CAH.counts.bigwig", "name": "ENCSR622CAH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR622CAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (127 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR622CAH/full_ENCSR622CAH.profile.bigwig", "name": "ENCSR622CAH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR622CAH" ], "assay": "DNASE", "biosample summary": "Homo sapiens muscle of leg tissue male embryo (127 days)", "biosample term name": "muscle of leg", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR344FLH/preprocessing/bigWigs/ENCSR344FLH.bigWig", "name": "ENCSR344FLH observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR344FLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue female embryo (109 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR344FLH/ENCSR344FLH_w_bias.bw", "name": "ENCSR344FLH DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR344FLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue female embryo (109 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR344FLH/ENCSR344FLH_wo_bias.bw", "name": "ENCSR344FLH DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR344FLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue female embryo (109 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR344FLH/full_ENCSR344FLH.counts.bigwig", "name": "ENCSR344FLH DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR344FLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue female embryo (109 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR344FLH/full_ENCSR344FLH.profile.bigwig", "name": "ENCSR344FLH DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR344FLH" ], "assay": "DNASE", "biosample summary": "Homo sapiens brain tissue female embryo (109 days)", "biosample term name": "brain", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR324SGE/preprocessing/bigWigs/ENCSR324SGE.bigWig", "name": "ENCSR324SGE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR324SGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324SGE/ENCSR324SGE_w_bias.bw", "name": "ENCSR324SGE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR324SGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324SGE/ENCSR324SGE_wo_bias.bw", "name": "ENCSR324SGE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR324SGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324SGE/full_ENCSR324SGE.counts.bigwig", "name": "ENCSR324SGE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR324SGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR324SGE/full_ENCSR324SGE.profile.bigwig", "name": "ENCSR324SGE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR324SGE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR649XRC/preprocessing/bigWigs/ENCSR649XRC.bigWig", "name": "ENCSR649XRC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR649XRC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649XRC/ENCSR649XRC_w_bias.bw", "name": "ENCSR649XRC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR649XRC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649XRC/ENCSR649XRC_wo_bias.bw", "name": "ENCSR649XRC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR649XRC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649XRC/full_ENCSR649XRC.counts.bigwig", "name": "ENCSR649XRC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR649XRC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR649XRC/full_ENCSR649XRC.profile.bigwig", "name": "ENCSR649XRC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR649XRC" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR566HLQ/preprocessing/bigWigs/ENCSR566HLQ.bigWig", "name": "ENCSR566HLQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR566HLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566HLQ/ENCSR566HLQ_w_bias.bw", "name": "ENCSR566HLQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR566HLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566HLQ/ENCSR566HLQ_wo_bias.bw", "name": "ENCSR566HLQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR566HLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566HLQ/full_ENCSR566HLQ.counts.bigwig", "name": "ENCSR566HLQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR566HLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR566HLQ/full_ENCSR566HLQ.profile.bigwig", "name": "ENCSR566HLQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR566HLQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR540PVZ/preprocessing/bigWigs/ENCSR540PVZ.bigWig", "name": "ENCSR540PVZ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR540PVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right renal pelvis tissue male embryo (120 days)", "biosample term name": "right renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540PVZ/ENCSR540PVZ_w_bias.bw", "name": "ENCSR540PVZ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR540PVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right renal pelvis tissue male embryo (120 days)", "biosample term name": "right renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540PVZ/ENCSR540PVZ_wo_bias.bw", "name": "ENCSR540PVZ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR540PVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right renal pelvis tissue male embryo (120 days)", "biosample term name": "right renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540PVZ/full_ENCSR540PVZ.counts.bigwig", "name": "ENCSR540PVZ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR540PVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right renal pelvis tissue male embryo (120 days)", "biosample term name": "right renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR540PVZ/full_ENCSR540PVZ.profile.bigwig", "name": "ENCSR540PVZ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR540PVZ" ], "assay": "DNASE", "biosample summary": "Homo sapiens right renal pelvis tissue male embryo (120 days)", "biosample term name": "right renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR247IUJ/preprocessing/bigWigs/ENCSR247IUJ.bigWig", "name": "ENCSR247IUJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR247IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (37 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR247IUJ/ENCSR247IUJ_w_bias.bw", "name": "ENCSR247IUJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR247IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (37 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR247IUJ/ENCSR247IUJ_wo_bias.bw", "name": "ENCSR247IUJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR247IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (37 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR247IUJ/full_ENCSR247IUJ.counts.bigwig", "name": "ENCSR247IUJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR247IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (37 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR247IUJ/full_ENCSR247IUJ.profile.bigwig", "name": "ENCSR247IUJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR247IUJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens B cell male adult (37 years)", "biosample term name": "B cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR129KIV/preprocessing/bigWigs/ENCSR129KIV.bigWig", "name": "ENCSR129KIV observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR129KIV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (108 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129KIV/ENCSR129KIV_w_bias.bw", "name": "ENCSR129KIV DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129KIV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (108 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129KIV/ENCSR129KIV_wo_bias.bw", "name": "ENCSR129KIV DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR129KIV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (108 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129KIV/full_ENCSR129KIV.counts.bigwig", "name": "ENCSR129KIV DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129KIV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (108 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR129KIV/full_ENCSR129KIV.profile.bigwig", "name": "ENCSR129KIV DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR129KIV" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (108 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR425MRQ/preprocessing/bigWigs/ENCSR425MRQ.bigWig", "name": "ENCSR425MRQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR425MRQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR425MRQ/ENCSR425MRQ_w_bias.bw", "name": "ENCSR425MRQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR425MRQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR425MRQ/ENCSR425MRQ_wo_bias.bw", "name": "ENCSR425MRQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR425MRQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR425MRQ/full_ENCSR425MRQ.counts.bigwig", "name": "ENCSR425MRQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR425MRQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR425MRQ/full_ENCSR425MRQ.profile.bigwig", "name": "ENCSR425MRQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR425MRQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell male adult (37 years) treated with 7.5 \u03bcg/kg G-CSF for 4 days", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR130HIE/preprocessing/bigWigs/ENCSR130HIE.bigWig", "name": "ENCSR130HIE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR130HIE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-7 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR130HIE/ENCSR130HIE_w_bias.bw", "name": "ENCSR130HIE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR130HIE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-7 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR130HIE/ENCSR130HIE_wo_bias.bw", "name": "ENCSR130HIE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR130HIE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-7 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR130HIE/full_ENCSR130HIE.counts.bigwig", "name": "ENCSR130HIE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR130HIE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-7 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR130HIE/full_ENCSR130HIE.profile.bigwig", "name": "ENCSR130HIE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR130HIE" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-7 for 24 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR205ECC/preprocessing/bigWigs/ENCSR205ECC.bigWig", "name": "ENCSR205ECC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR205ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR205ECC/ENCSR205ECC_w_bias.bw", "name": "ENCSR205ECC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR205ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR205ECC/ENCSR205ECC_wo_bias.bw", "name": "ENCSR205ECC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR205ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR205ECC/full_ENCSR205ECC.counts.bigwig", "name": "ENCSR205ECC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR205ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR205ECC/full_ENCSR205ECC.profile.bigwig", "name": "ENCSR205ECC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR205ECC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-15 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR688OIJ/preprocessing/bigWigs/ENCSR688OIJ.bigWig", "name": "ENCSR688OIJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR688OIJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688OIJ/ENCSR688OIJ_w_bias.bw", "name": "ENCSR688OIJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR688OIJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688OIJ/ENCSR688OIJ_wo_bias.bw", "name": "ENCSR688OIJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR688OIJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688OIJ/full_ENCSR688OIJ.counts.bigwig", "name": "ENCSR688OIJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR688OIJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR688OIJ/full_ENCSR688OIJ.profile.bigwig", "name": "ENCSR688OIJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR688OIJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR335LOQ/preprocessing/bigWigs/ENCSR335LOQ.bigWig", "name": "ENCSR335LOQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR335LOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335LOQ/ENCSR335LOQ_w_bias.bw", "name": "ENCSR335LOQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335LOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335LOQ/ENCSR335LOQ_wo_bias.bw", "name": "ENCSR335LOQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR335LOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335LOQ/full_ENCSR335LOQ.counts.bigwig", "name": "ENCSR335LOQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335LOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR335LOQ/full_ENCSR335LOQ.profile.bigwig", "name": "ENCSR335LOQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR335LOQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR050VTC/preprocessing/bigWigs/ENCSR050VTC.bigWig", "name": "ENCSR050VTC observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR050VTC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR050VTC/ENCSR050VTC_w_bias.bw", "name": "ENCSR050VTC DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR050VTC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR050VTC/ENCSR050VTC_wo_bias.bw", "name": "ENCSR050VTC DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR050VTC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR050VTC/full_ENCSR050VTC.counts.bigwig", "name": "ENCSR050VTC DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR050VTC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR050VTC/full_ENCSR050VTC.profile.bigwig", "name": "ENCSR050VTC DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR050VTC" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-23 for 24 hours, 100 ng/mL Interleukin-1b for 24 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR438USP/preprocessing/bigWigs/ENCSR438USP.bigWig", "name": "ENCSR438USP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR438USP" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR438USP/ENCSR438USP_w_bias.bw", "name": "ENCSR438USP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR438USP" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR438USP/ENCSR438USP_wo_bias.bw", "name": "ENCSR438USP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR438USP" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR438USP/full_ENCSR438USP.counts.bigwig", "name": "ENCSR438USP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR438USP" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR438USP/full_ENCSR438USP.profile.bigwig", "name": "ENCSR438USP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR438USP" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR734VFU/preprocessing/bigWigs/ENCSR734VFU.bigWig", "name": "ENCSR734VFU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR734VFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR734VFU/ENCSR734VFU_w_bias.bw", "name": "ENCSR734VFU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR734VFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR734VFU/ENCSR734VFU_wo_bias.bw", "name": "ENCSR734VFU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR734VFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR734VFU/full_ENCSR734VFU.counts.bigwig", "name": "ENCSR734VFU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR734VFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR734VFU/full_ENCSR734VFU.profile.bigwig", "name": "ENCSR734VFU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR734VFU" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR840QLA/preprocessing/bigWigs/ENCSR840QLA.bigWig", "name": "ENCSR840QLA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR840QLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840QLA/ENCSR840QLA_w_bias.bw", "name": "ENCSR840QLA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR840QLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840QLA/ENCSR840QLA_wo_bias.bw", "name": "ENCSR840QLA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR840QLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840QLA/full_ENCSR840QLA.counts.bigwig", "name": "ENCSR840QLA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR840QLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR840QLA/full_ENCSR840QLA.profile.bigwig", "name": "ENCSR840QLA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR840QLA" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL TNF-alpha for 48 hours", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR261SMF/preprocessing/bigWigs/ENCSR261SMF.bigWig", "name": "ENCSR261SMF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR261SMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 6.9", "biosample term name": "iPS DF 6.9", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261SMF/ENCSR261SMF_w_bias.bw", "name": "ENCSR261SMF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR261SMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 6.9", "biosample term name": "iPS DF 6.9", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261SMF/ENCSR261SMF_wo_bias.bw", "name": "ENCSR261SMF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR261SMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 6.9", "biosample term name": "iPS DF 6.9", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261SMF/full_ENCSR261SMF.counts.bigwig", "name": "ENCSR261SMF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR261SMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 6.9", "biosample term name": "iPS DF 6.9", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR261SMF/full_ENCSR261SMF.profile.bigwig", "name": "ENCSR261SMF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR261SMF" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 6.9", "biosample term name": "iPS DF 6.9", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR609DDQ/preprocessing/bigWigs/ENCSR609DDQ.bigWig", "name": "ENCSR609DDQ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR609DDQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (34 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR609DDQ/ENCSR609DDQ_w_bias.bw", "name": "ENCSR609DDQ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR609DDQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (34 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR609DDQ/ENCSR609DDQ_wo_bias.bw", "name": "ENCSR609DDQ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR609DDQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (34 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR609DDQ/full_ENCSR609DDQ.counts.bigwig", "name": "ENCSR609DDQ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR609DDQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (34 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR609DDQ/full_ENCSR609DDQ.profile.bigwig", "name": "ENCSR609DDQ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR609DDQ" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD8-positive, alpha-beta T cell female adult (34 years)", "biosample term name": "CD8-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR171APM/preprocessing/bigWigs/ENCSR171APM.bigWig", "name": "ENCSR171APM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR171APM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR171APM/ENCSR171APM_w_bias.bw", "name": "ENCSR171APM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR171APM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR171APM/ENCSR171APM_wo_bias.bw", "name": "ENCSR171APM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR171APM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR171APM/full_ENCSR171APM.counts.bigwig", "name": "ENCSR171APM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR171APM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR171APM/full_ENCSR171APM.profile.bigwig", "name": "ENCSR171APM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR171APM" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR618HFT/preprocessing/bigWigs/ENCSR618HFT.bigWig", "name": "ENCSR618HFT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR618HFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR618HFT/ENCSR618HFT_w_bias.bw", "name": "ENCSR618HFT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR618HFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR618HFT/ENCSR618HFT_wo_bias.bw", "name": "ENCSR618HFT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR618HFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR618HFT/full_ENCSR618HFT.counts.bigwig", "name": "ENCSR618HFT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR618HFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR618HFT/full_ENCSR618HFT.profile.bigwig", "name": "ENCSR618HFT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR618HFT" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (42 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR654WXX/preprocessing/bigWigs/ENCSR654WXX.bigWig", "name": "ENCSR654WXX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR654WXX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654WXX/ENCSR654WXX_w_bias.bw", "name": "ENCSR654WXX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR654WXX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654WXX/ENCSR654WXX_wo_bias.bw", "name": "ENCSR654WXX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR654WXX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654WXX/full_ENCSR654WXX.counts.bigwig", "name": "ENCSR654WXX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR654WXX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR654WXX/full_ENCSR654WXX.profile.bigwig", "name": "ENCSR654WXX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR654WXX" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)", "biosample term name": "CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR000EMU/preprocessing/bigWigs/ENCSR000EMU.bigWig", "name": "ENCSR000EMU observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR000EMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens H1", "biosample term name": "H1", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMU/ENCSR000EMU_w_bias.bw", "name": "ENCSR000EMU DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens H1", "biosample term name": "H1", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMU/ENCSR000EMU_wo_bias.bw", "name": "ENCSR000EMU DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR000EMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens H1", "biosample term name": "H1", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMU/full_ENCSR000EMU.counts.bigwig", "name": "ENCSR000EMU DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens H1", "biosample term name": "H1", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR000EMU/full_ENCSR000EMU.profile.bigwig", "name": "ENCSR000EMU DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR000EMU" ], "assay": "DNASE", "biosample summary": "Homo sapiens H1", "biosample term name": "H1", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR152AVY/preprocessing/bigWigs/ENCSR152AVY.bigWig", "name": "ENCSR152AVY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR152AVY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152AVY/ENCSR152AVY_w_bias.bw", "name": "ENCSR152AVY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR152AVY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152AVY/ENCSR152AVY_wo_bias.bw", "name": "ENCSR152AVY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR152AVY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152AVY/full_ENCSR152AVY.counts.bigwig", "name": "ENCSR152AVY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR152AVY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR152AVY/full_ENCSR152AVY.profile.bigwig", "name": "ENCSR152AVY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR152AVY" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD4-positive, alpha-beta T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour", "biosample term name": "stimulated activated CD4-positive, alpha-beta T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR014FPY/preprocessing/bigWigs/ENCSR014FPY.bigWig", "name": "ENCSR014FPY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR014FPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 4.7", "biosample term name": "iPS DF 4.7", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014FPY/ENCSR014FPY_w_bias.bw", "name": "ENCSR014FPY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR014FPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 4.7", "biosample term name": "iPS DF 4.7", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014FPY/ENCSR014FPY_wo_bias.bw", "name": "ENCSR014FPY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR014FPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 4.7", "biosample term name": "iPS DF 4.7", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014FPY/full_ENCSR014FPY.counts.bigwig", "name": "ENCSR014FPY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR014FPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 4.7", "biosample term name": "iPS DF 4.7", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR014FPY/full_ENCSR014FPY.profile.bigwig", "name": "ENCSR014FPY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR014FPY" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 4.7", "biosample term name": "iPS DF 4.7", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR440QMR/preprocessing/bigWigs/ENCSR440QMR.bigWig", "name": "ENCSR440QMR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR440QMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.7", "biosample term name": "iPS DF 19.7", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440QMR/ENCSR440QMR_w_bias.bw", "name": "ENCSR440QMR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR440QMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.7", "biosample term name": "iPS DF 19.7", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440QMR/ENCSR440QMR_wo_bias.bw", "name": "ENCSR440QMR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR440QMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.7", "biosample term name": "iPS DF 19.7", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440QMR/full_ENCSR440QMR.counts.bigwig", "name": "ENCSR440QMR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR440QMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.7", "biosample term name": "iPS DF 19.7", "life stage": "newborn" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR440QMR/full_ENCSR440QMR.profile.bigwig", "name": "ENCSR440QMR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR440QMR" ], "assay": "DNASE", "biosample summary": "Homo sapiens iPS DF 19.7", "biosample term name": "iPS DF 19.7", "life stage": "newborn" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR695AUY/preprocessing/bigWigs/ENCSR695AUY.bigWig", "name": "ENCSR695AUY observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR695AUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female adult (34 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR695AUY/ENCSR695AUY_w_bias.bw", "name": "ENCSR695AUY DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR695AUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female adult (34 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR695AUY/ENCSR695AUY_wo_bias.bw", "name": "ENCSR695AUY DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR695AUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female adult (34 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR695AUY/full_ENCSR695AUY.counts.bigwig", "name": "ENCSR695AUY DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR695AUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female adult (34 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR695AUY/full_ENCSR695AUY.profile.bigwig", "name": "ENCSR695AUY DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR695AUY" ], "assay": "DNASE", "biosample summary": "Homo sapiens CD14-positive monocyte female adult (34 years)", "biosample term name": "CD14-positive monocyte", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR456KDF/preprocessing/bigWigs/ENCSR456KDF.bigWig", "name": "ENCSR456KDF observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR456KDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female embryo (108 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR456KDF/ENCSR456KDF_w_bias.bw", "name": "ENCSR456KDF DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR456KDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female embryo (108 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR456KDF/ENCSR456KDF_wo_bias.bw", "name": "ENCSR456KDF DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR456KDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female embryo (108 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR456KDF/full_ENCSR456KDF.counts.bigwig", "name": "ENCSR456KDF DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR456KDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female embryo (108 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR456KDF/full_ENCSR456KDF.profile.bigwig", "name": "ENCSR456KDF DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR456KDF" ], "assay": "DNASE", "biosample summary": "Homo sapiens left lung tissue female embryo (108 days)", "biosample term name": "left lung", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR550UWM/preprocessing/bigWigs/ENCSR550UWM.bigWig", "name": "ENCSR550UWM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR550UWM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (97 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR550UWM/ENCSR550UWM_w_bias.bw", "name": "ENCSR550UWM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR550UWM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (97 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR550UWM/ENCSR550UWM_wo_bias.bw", "name": "ENCSR550UWM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR550UWM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (97 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR550UWM/full_ENCSR550UWM.counts.bigwig", "name": "ENCSR550UWM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR550UWM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (97 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR550UWM/full_ENCSR550UWM.profile.bigwig", "name": "ENCSR550UWM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR550UWM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal cortex interstitium tissue male embryo (97 days)", "biosample term name": "renal cortex interstitium", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR563XRP/preprocessing/bigWigs/ENCSR563XRP.bigWig", "name": "ENCSR563XRP observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR563XRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (107 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563XRP/ENCSR563XRP_w_bias.bw", "name": "ENCSR563XRP DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR563XRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (107 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563XRP/ENCSR563XRP_wo_bias.bw", "name": "ENCSR563XRP DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR563XRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (107 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563XRP/full_ENCSR563XRP.counts.bigwig", "name": "ENCSR563XRP DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR563XRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (107 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR563XRP/full_ENCSR563XRP.profile.bigwig", "name": "ENCSR563XRP DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR563XRP" ], "assay": "DNASE", "biosample summary": "Homo sapiens large intestine tissue female embryo (107 days)", "biosample term name": "large intestine", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR166TEE/preprocessing/bigWigs/ENCSR166TEE.bigWig", "name": "ENCSR166TEE observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR166TEE" ], "assay": "DNASE", "biosample summary": "Homo sapiens forelimb muscle tissue female embryo (108 days)", "biosample term name": "forelimb muscle", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR166TEE/ENCSR166TEE_w_bias.bw", "name": "ENCSR166TEE DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR166TEE" ], "assay": "DNASE", "biosample summary": "Homo sapiens forelimb muscle tissue female embryo (108 days)", "biosample term name": "forelimb muscle", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR166TEE/ENCSR166TEE_wo_bias.bw", "name": "ENCSR166TEE DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR166TEE" ], "assay": "DNASE", "biosample summary": "Homo sapiens forelimb muscle tissue female embryo (108 days)", "biosample term name": "forelimb muscle", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR166TEE/full_ENCSR166TEE.counts.bigwig", "name": "ENCSR166TEE DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR166TEE" ], "assay": "DNASE", "biosample summary": "Homo sapiens forelimb muscle tissue female embryo (108 days)", "biosample term name": "forelimb muscle", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR166TEE/full_ENCSR166TEE.profile.bigwig", "name": "ENCSR166TEE DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR166TEE" ], "assay": "DNASE", "biosample summary": "Homo sapiens forelimb muscle tissue female embryo (108 days)", "biosample term name": "forelimb muscle", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR619DRM/preprocessing/bigWigs/ENCSR619DRM.bigWig", "name": "ENCSR619DRM observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR619DRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (105 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR619DRM/ENCSR619DRM_w_bias.bw", "name": "ENCSR619DRM DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR619DRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (105 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR619DRM/ENCSR619DRM_wo_bias.bw", "name": "ENCSR619DRM DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR619DRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (105 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR619DRM/full_ENCSR619DRM.counts.bigwig", "name": "ENCSR619DRM DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR619DRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (105 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR619DRM/full_ENCSR619DRM.profile.bigwig", "name": "ENCSR619DRM DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR619DRM" ], "assay": "DNASE", "biosample summary": "Homo sapiens renal pelvis tissue female embryo (105 days)", "biosample term name": "renal pelvis", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR522FGG/preprocessing/bigWigs/ENCSR522FGG.bigWig", "name": "ENCSR522FGG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR522FGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (108 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR522FGG/ENCSR522FGG_w_bias.bw", "name": "ENCSR522FGG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR522FGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (108 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR522FGG/ENCSR522FGG_wo_bias.bw", "name": "ENCSR522FGG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR522FGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (108 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR522FGG/full_ENCSR522FGG.counts.bigwig", "name": "ENCSR522FGG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR522FGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (108 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR522FGG/full_ENCSR522FGG.profile.bigwig", "name": "ENCSR522FGG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR522FGG" ], "assay": "DNASE", "biosample summary": "Homo sapiens stomach tissue male embryo (108 days)", "biosample term name": "stomach", "life stage": "embryonic" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR416QNA/preprocessing/bigWigs/ENCSR416QNA.bigWig", "name": "ENCSR416QNA observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR416QNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR416QNA/ENCSR416QNA_w_bias.bw", "name": "ENCSR416QNA DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR416QNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR416QNA/ENCSR416QNA_wo_bias.bw", "name": "ENCSR416QNA DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR416QNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR416QNA/full_ENCSR416QNA.counts.bigwig", "name": "ENCSR416QNA DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR416QNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR416QNA/full_ENCSR416QNA.profile.bigwig", "name": "ENCSR416QNA DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR416QNA" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated T-cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR040DGJ/preprocessing/bigWigs/ENCSR040DGJ.bigWig", "name": "ENCSR040DGJ observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR040DGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell", "biosample term name": "T-cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR040DGJ/ENCSR040DGJ_w_bias.bw", "name": "ENCSR040DGJ DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR040DGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell", "biosample term name": "T-cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR040DGJ/ENCSR040DGJ_wo_bias.bw", "name": "ENCSR040DGJ DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR040DGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell", "biosample term name": "T-cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR040DGJ/full_ENCSR040DGJ.counts.bigwig", "name": "ENCSR040DGJ DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR040DGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell", "biosample term name": "T-cell", "life stage": "unknown" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR040DGJ/full_ENCSR040DGJ.profile.bigwig", "name": "ENCSR040DGJ DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR040DGJ" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell", "biosample term name": "T-cell", "life stage": "unknown" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR772HUG/preprocessing/bigWigs/ENCSR772HUG.bigWig", "name": "ENCSR772HUG observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR772HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens common myeloid progenitor, CD34-positive male adult (37 years)", "biosample term name": "common myeloid progenitor, CD34-positive", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR772HUG/ENCSR772HUG_w_bias.bw", "name": "ENCSR772HUG DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR772HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens common myeloid progenitor, CD34-positive male adult (37 years)", "biosample term name": "common myeloid progenitor, CD34-positive", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR772HUG/ENCSR772HUG_wo_bias.bw", "name": "ENCSR772HUG DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR772HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens common myeloid progenitor, CD34-positive male adult (37 years)", "biosample term name": "common myeloid progenitor, CD34-positive", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR772HUG/full_ENCSR772HUG.counts.bigwig", "name": "ENCSR772HUG DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR772HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens common myeloid progenitor, CD34-positive male adult (37 years)", "biosample term name": "common myeloid progenitor, CD34-positive", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR772HUG/full_ENCSR772HUG.profile.bigwig", "name": "ENCSR772HUG DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR772HUG" ], "assay": "DNASE", "biosample summary": "Homo sapiens common myeloid progenitor, CD34-positive male adult (37 years)", "biosample term name": "common myeloid progenitor, CD34-positive", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR060TTR/preprocessing/bigWigs/ENCSR060TTR.bigWig", "name": "ENCSR060TTR observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR060TTR" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060TTR/ENCSR060TTR_w_bias.bw", "name": "ENCSR060TTR DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060TTR" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060TTR/ENCSR060TTR_wo_bias.bw", "name": "ENCSR060TTR DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR060TTR" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060TTR/full_ENCSR060TTR.counts.bigwig", "name": "ENCSR060TTR DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060TTR" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR060TTR/full_ENCSR060TTR.profile.bigwig", "name": "ENCSR060TTR DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR060TTR" ], "assay": "DNASE", "biosample summary": "Homo sapiens stimulated activated CD8-positive, alpha-beta memory T cell female adult (33 years) treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-7 for 48 hours", "biosample term name": "stimulated activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR473LSX/preprocessing/bigWigs/ENCSR473LSX.bigWig", "name": "ENCSR473LSX observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR473LSX" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR473LSX/ENCSR473LSX_w_bias.bw", "name": "ENCSR473LSX DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR473LSX" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR473LSX/ENCSR473LSX_wo_bias.bw", "name": "ENCSR473LSX DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR473LSX" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR473LSX/full_ENCSR473LSX.counts.bigwig", "name": "ENCSR473LSX DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR473LSX" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR473LSX/full_ENCSR473LSX.profile.bigwig", "name": "ENCSR473LSX DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR473LSX" ], "assay": "DNASE", "biosample summary": "Homo sapiens T-cell male adult (38 years)", "biosample term name": "T-cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/DNASE/ENCSR175OHT/preprocessing/bigWigs/ENCSR175OHT.bigWig", "name": "ENCSR175OHT observed", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "red" }, "metadata": { "sample": [ "ENCSR175OHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR175OHT/ENCSR175OHT_w_bias.bw", "name": "ENCSR175OHT DNASE uncorrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR175OHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "bigwig", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR175OHT/ENCSR175OHT_wo_bias.bw", "name": "ENCSR175OHT DNASE corrected predictions", "showOnHubLoad": false, "options": { "aggregateMethod": "MAX", "color": "blue" }, "metadata": { "sample": [ "ENCSR175OHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR175OHT/full_ENCSR175OHT.counts.bigwig", "name": "ENCSR175OHT DNASE corrected count contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR175OHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } }, { "type": "dynseq", "url": "https://mitra.stanford.edu/kundaje/oak/projects/chromatin-atlas-2022/bigwigs/DNASE/ENCSR175OHT/full_ENCSR175OHT.profile.bigwig", "name": "ENCSR175OHT DNASE corrected profile contribution scores", "showOnHubLoad": false, "options": { "color": "green" }, "metadata": { "sample": [ "ENCSR175OHT" ], "assay": "DNASE", "biosample summary": "Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours", "biosample term name": "activated CD8-positive, alpha-beta memory T cell", "life stage": "adult" } } ]