function mesh_display ( prefix, node_show, element_show ) %*****************************************************************************80 % %% MESH_DISPLAY displays a mesh. % % Discussion: % % MESH_DISPLAY displays the nodes and elements of a mesh on the % MATLAB graphics screen. % % Usage: % % mesh_display prefix node_show element_show % % where: % % 'prefix' is the common prefix for the node and element files: % % * prefix_nodes.txt, the node coordinates. % * prefix_elements.txt, the nodes that make up each element. % % 'node_show' indicates the node visibility: % % 0: do not show the nodes; % 1: show the nodes; % 2: show the nodes, and label them. % % 'element_show' indicates the element visibility: % % 0: do not show the element; % 1: show the element; % 2: show the element, and color them. % 3: show the element, and color them, and label them. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 29 September 2009 % % Author: % % John Burkardt % fprintf ( 1, '\n' ); timestamp ( ); fprintf ( 1, '\n' ); fprintf ( 1, 'MESH_DISPLAY\n' ); fprintf ( 1, ' MATLAB version\n' ); fprintf ( 1, '\n' ); fprintf ( 1, ' Read a node dataset of NODE_NUM points in 2 dimensions.\n' ); fprintf ( 1, ' Read an associated element dataset of ELEMENT_NUM\n' ); fprintf ( 1, ' elements using ELEMENT_ORDER nodes.\n' ); fprintf ( 1, '\n' ); fprintf ( 1, ' Display an image of the data on the MATLAB graphics screen.\n' ); % % First argument is the file prefix. % if ( nargin < 1 ) fprintf ( 1, '\n' ); fprintf ( 1, 'MESH_DISPLAY:\n' ); prefix = input ( ' Enter the file prefix' ); end % % Second argument is node visibility. % if ( nargin < 2 ) fprintf ( 1, '\n' ); fprintf ( 1, ' Options for node visibility:\n' ); fprintf ( 1, ' 0: do not show the nodes;\n' ); fprintf ( 1, ' 1: show the nodes;\n' ); fprintf ( 1, ' 2: show the nodes, and label them.\n' ); node_show = input ( ' Enter the node visibility option:' ); end % % Third argument is element visibility. % if ( nargin < 3 ) fprintf ( 1, '\n' ); fprintf ( 1, ' Options for element visibility:\n' ); fprintf ( 1, ' 0: do not show the telements;\n' ); fprintf ( 1, ' 1: show the elements;\n' ); fprintf ( 1, ' 2: show the elements, and color them.\n' ); fprintf ( 1, ' 3: show the elements, and color them, and label them.\n' ); element_show = input ( ' Enter the element visibility option:' ); end % % Create the file names. % node_filename = strcat ( prefix, '_nodes.txt' ); element_filename = strcat ( prefix, '_elements.txt' ); % % Read the node data. % [ dim_num, node_num ] = r8mat_header_read ( node_filename ); fprintf ( 1, '\n' ); fprintf ( 1, ' Read the header of "%s".\n', node_filename ); fprintf ( 1, '\n' ); fprintf ( 1, ' Spatial dimension DIM_NUM = %d\n', dim_num ); fprintf ( 1, ' Number of nodes NODE_NUM = %d\n', node_num ); node_xy = r8mat_data_read ( node_filename, dim_num, node_num ); fprintf ( 1, '\n' ); fprintf ( 1, ' Read the data in "%s".\n', node_filename ); r8mat_transpose_print_some ( dim_num, node_num, node_xy, 1, 1, 2, 5, ... ' Initial portion of data read from file:' ); % % Read the element data. % [ element_order, element_num ] = i4mat_header_read ( element_filename ); fprintf ( 1, '\n' ); fprintf ( 1, ' Read the header of "%s".\n', element_filename ); fprintf ( 1, '\n' ); fprintf ( 1, ' Element order = %d\n', element_order ); fprintf ( 1, ' Number of elements = %d\n', element_num ); element_node = i4mat_data_read ( element_filename, ... element_order, element_num ); fprintf ( 1, '\n' ); fprintf ( 1, ' Read the data in "%s".\n', element_filename ); i4mat_transpose_print_some ( element_order, element_num, element_node, ... 1, 1, element_order, 5, ' Initial portion of data read from file:' ); % % Detect and correct zero-based node indexing. % element_node = mesh_base_one ( node_num, element_order, element_num, ... element_node ); % % Display a plot. % mesh_display_matlab ( prefix, node_num, node_xy, element_order, ... element_num, element_node, node_show, element_show ); % % Terminate. % fprintf ( 1, '\n' ); fprintf ( 1, 'MESH_DISPLAY\n' ); fprintf ( 1, ' Normal end of execution.\n' ); fprintf ( 1, '\n' ); timestamp ( ); return end function column_num = file_column_count ( input_file_name ) %*****************************************************************************80 % %% FILE_COLUMN_COUNT counts the columns in the first line of a file. % % Discussion: % % The file is assumed to be a simple text file. % % Most lines of the file are presumed to consist of COLUMN_NUM words, % separated by spaces. There may also be some blank lines, and some % comment lines, which have a "#" in column 1. % % The routine tries to find the first non-comment non-blank line and % counts the number of words in that line. % % If all lines are blanks or comments, it goes back and tries to analyze % a comment line. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 21 February 2004 % % Author: % % John Burkardt % % Parameters: % % Input, string INPUT_FILE_NAME, the name of the file. % % Output, integer COLUMN_NUM, the number of columns in the file. % FALSE = 0; TRUE = 1; % % Open the file. % input_unit = fopen ( input_file_name ); if ( input_unit < 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'FILE_COLUMN_COUNT - Error!\n' ); fprintf ( 1, ' Could not open the file "%s".\n', input_file_name ); error ( 'FILE_COLUMN_COUNT - Error!' ); end % % Read one line, but skip blank lines and comment lines. % Use FGETL so we drop the newline character! % got_one = FALSE; while ( 1 ) line = fgetl ( input_unit ); if ( line == -1 ) break; end if ( s_len_trim ( line ) == 0 ) elseif ( line(1) == '#' ) else got_one = TRUE; break; end end fclose ( input_unit ); if ( got_one == FALSE ) fprintf ( 1, '\n' ); fprintf ( 1, 'FILE_COLUMN_COUNT - Warning!\n' ); fprintf ( 1, ' The file does not seem to contain any data.\n' ); column_num = -1; return; end column_num = s_word_count ( line ); return end function row_num = file_row_count ( input_file_name ) %*****************************************************************************80 % %% FILE_ROW_COUNT counts the number of row records in a file. % % Discussion: % % Each input line is a "RECORD". % % The records are divided into three groups: % % * BLANK LINES (nothing but blanks) % * COMMENT LINES (begin with a '#') % * DATA RECORDS (anything else) % % The value returned by the function is the number of data records. % % By the way, if the MATLAB routine FGETS is used, instead of % FGETL, then the variable LINE will include line termination % characters, which means that a blank line would not actually % have zero characters. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 31 December 2006 % % Author: % % John Burkardt % % Parameters: % % Input, string INPUT_FILE_NAME, the name of the input file. % % Output, integer ROW_NUM, the number of rows found. % input_unit = fopen ( input_file_name ); if ( input_unit < 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'FILE_ROW_COUNT - Error!\n' ); fprintf ( 1, ' Could not open the file "%s".\n', input_file_name ); error ( 'FILE_ROW_COUNT - Error!' ); end blank_num = 0; comment_num = 0; row_num = 0; record_num = 0; while ( 1 ) line = fgetl ( input_unit ); if ( line == -1 ) break; end record_num = record_num + 1; record_length = s_len_trim ( line ); if ( record_length <= 0 ) blank_num = blank_num + 1; elseif ( line(1) == '#' ) comment_num = comment_num + 1; else row_num = row_num + 1; end end fclose ( input_unit ); return end function table = i4mat_data_read ( input_filename, m, n ) %*****************************************************************************80 % %% I4MAT_DATA_READ reads data from an I4MAT file. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 27 January 2006 % % Author: % % John Burkardt % % Parameters: % % Input, string INPUT_FILENAME, the name of the input file. % % Input, integer M, N, the number of rows and columns in the data. % % Output, integer TABLE(M,N), the point coordinates. % table = zeros ( m, n ); % % Build up the format string for reading M real numbers. % string = ' '; for i = 0 : m string = strcat ( string, ' %d' ); end input_unit = fopen ( input_filename ); if ( input_unit < 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'I4MAT_DATA_READ - Error!\n' ); fprintf ( 1, ' Could not open the input file.\n' ); error ( 'I4MAT_DATA_READ - Error!' ); end i = 0; while ( i < n ) line = fgets ( input_unit ); if ( line == -1 ) fprintf ( 1, '\n' ); fprintf ( 1, 'I4MAT_DATA_READ - Error!\n' ); fprintf ( 1, ' End of input while reading data.\n' ); error ( 'I4MAT_DATA_READ - Error!' ); end if ( line(1) == '#' ) elseif ( s_len_trim ( line ) == 0 ) else [ x, count ] = sscanf ( line, string ); if ( count == m ) i = i + 1; table(1:m,i) = x(1:m); end end end fclose ( input_unit ); return end function [ m, n ] = i4mat_header_read ( input_filename ) %*****************************************************************************80 % %% I4MAT_HEADER_READ reads the header from an I4MAT file. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 22 October 2004 % % Author: % % John Burkardt % % Parameters: % % Input, string INPUT_FILENAME, the name of the input file. % % Output, integer M, the spatial dimension. % % Output, integer N, the number of points. % m = file_column_count ( input_filename ); if ( m <= 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'I4MAT_HEADER_READ - Fatal error!\n' ); fprintf ( 1, ' There was some kind of I/O problem while trying\n' ); fprintf ( 1, ' to count the number of data columns in\n' ); fprintf ( 1, ' the file %s.\n', input_filename ); end n = file_row_count ( input_filename ); if ( n <= 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'I4MAT_HEADER_READ - Fatal error!\n' ); fprintf ( 1, ' There was some kind of I/O problem while trying\n' ); fprintf ( 1, ' to count the number of data rows in\n' ); fprintf ( 1, ' the file %s\n', input_filename ); end return end function i4mat_transpose_print_some ( m, n, a, ilo, jlo, ihi, jhi, title ) %*****************************************************************************80 % %% I4MAT_TRANSPOSE_PRINT_SOME prints some of an I4MAT, transposed. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 21 June 2005 % % Author: % % John Burkardt % % Parameters: % % Input, integer M, N, the number of rows and columns. % % Input, integer A(M,N), an M by N matrix to be printed. % % Input, integer ILO, JLO, the first row and column to print. % % Input, integer IHI, JHI, the last row and column to print. % % Input, string TITLE, an optional title. % incx = 10; if ( 0 < s_len_trim ( title ) ) fprintf ( 1, '\n' ); fprintf ( 1, '%s\n', title ); end for i2lo = max ( ilo, 1 ) : incx : min ( ihi, m ) i2hi = i2lo + incx - 1; i2hi = min ( i2hi, m ); i2hi = min ( i2hi, ihi ); inc = i2hi + 1 - i2lo; fprintf ( 1, '\n' ); fprintf ( 1, ' Row: ' ); for i = i2lo : i2hi fprintf ( 1, '%7d ', i ); end fprintf ( 1, '\n' ); fprintf ( 1, ' Col\n' ); fprintf ( 1, '\n' ); j2lo = max ( jlo, 1 ); j2hi = min ( jhi, n ); for j = j2lo : j2hi fprintf ( 1, '%5d ', j ); for i2 = 1 : inc i = i2lo - 1 + i2; fprintf ( 1, '%7d ', a(i,j) ); end fprintf ( 1, '\n' ); end end return end function element_node = mesh_base_one ( node_num, element_order, ... element_num, element_node ) %*****************************************************************************80 % %% MESH_BASE_ONE ensures that the element definition is one-based. % % Discussion: % % The ELEMENT_NODE array contains nodes indices that form elements. % The convention for node indexing might start at 0 or at 1. % % Since a MATLAB program will naturally assume a 1-based indexing, it is % necessary to check a given element definition and, if it is actually % 0-based, to convert it. % % This function attempts to detect 0-based node indexing and correct it. % % Thanks to Mark Asch for pointing out an error, 01 December 2009! % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 01 December 2009 % % Author: % % John Burkardt % % Parameters: % % Input, integer NODE_NUM, the number of nodes. % % Input, integer ELEMENT_ORDER, the order of the elements. % % Input, integer ELEMENT_NUM, the number of elements. % % Input/output, integer ELEMENT_NODE(ELEMENT_ORDE,ELEMENT_NUM), the element % definitions. % node_min = min ( min ( element_node(1:element_order,1:element_num) ) ); node_max = max ( max ( element_node(1:element_order,1:element_num) ) ); if ( node_min == 0 && node_max == node_num - 1 ) fprintf ( 1, '\n' ); fprintf ( 1, 'MESH_BASE_ONE:\n' ); fprintf ( 1, ' The element indexing appears to be 0-based!\n' ); fprintf ( 1, ' This will be converted to 1-based.\n' ); element_node(1:element_order,1:element_num) = ... element_node(1:element_order,1:element_num) + 1; elseif ( node_min == 1 && node_max == node_num ) fprintf ( 1, '\n' ); fprintf ( 1, 'MESH_BASE_ONE:\n' ); fprintf ( 1, ' The element indexing appears to be 1-based!\n' ); fprintf ( 1, ' No conversion is necessary.\n' ); else fprintf ( 1, '\n' ); fprintf ( 1, 'MESH_BASE_ONE - Warning!\n' ); fprintf ( 1, ' The element indexing is not of a recognized type.\n' ); end return end function mesh_display_matlab ( prefix, node_num, node_xy, element_order, ... element_num, element_node, node_show, element_show ) %*****************************************************************************80 % %% MESH_DISPLAY_MATLAB displays a mesh. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 29 September 2009 % % Author: % % John Burkardt % % Parameters: % % Input, string PREFIX, the file name prefix that identifies the data. % % Input, integer NODE_NUM, the number of points. % % Input, real NODE_XY(2,NODE_NUM), the nodes. % % Input, integer ELEMENT_ORDER, the order of the elements. % % Input, integer ELEMENT_NUM, the number of elements. % % Input, integer ELEMENT_NODE(ELEMENT_ORDER,ELEMENT_NUM), lists, % for each element, the indices of the points that form the vertices % of the element. % % Input, logical NODE_SHOW: % 0, do not show the nodes. % 1, show the nodes. % 2, show the nodes, and label them. % % Input, logical ELEMENT_SHOW, % 0, do not show the elements. % 1, show the elements. % 2, show the elements, and color them. % 3, show the elements, and color them, and label them. % % % Clear the graphics screen. % clf; % % Get the scale. % xy_min(1) = min ( node_xy(1,:) ); xy_max(1) = max ( node_xy(1,:) ); xy_min(2) = min ( node_xy(2,:) ); xy_max(2) = max ( node_xy(2,:) ); xy_range(1:2) = xy_max(1:2) - xy_min(1:2); margin = 0.025 * max ( xy_range(1), xy_range(2) ); x_min = xy_min(1) - margin; x_max = xy_max(1) + margin; y_min = xy_min(2) - margin; y_max = xy_max(2) + margin; % % Draw the element faces. % if ( 2 <= element_show ) face_color = 'g'; for element = 1 : element_num p = element_node(1:element_order,element); patch ( node_xy(1,p), node_xy(2,p), face_color ); end end % % Draw the element lines. % if ( 1 <= element_show ) line_color = 'r'; for element = 1 : element_num p = [ element_node(1:element_order,element)', element_node(1,element) ]; line ( 'XData', node_xy(1,p), 'YData', node_xy(2,p), 'Color', line_color ); end end % % Label the elements. % if ( 3 <= element_show ) for element = 1 : element_num ave_x = 0.0; ave_y = 0.0; for i = 1 : element_order node = element_node(i,element); ave_x = ave_x + node_xy(1,node); ave_y = ave_y + node_xy(2,node); end ave_x = ave_x / element_order; ave_y = ave_y / element_order; text ( ave_x, ave_y, num2str ( element ) ); end end % % Draw the nodes. % hold on if ( 1 <= node_show ) plot ( node_xy(1,:), node_xy(2,:), 'o', 'markersize', 4, 'markerfacecolor', 'black' ); end % % Label the nodes. % % hold on if ( 2 <= node_show ) abit = margin; for j = 1 : node_num text ( node_xy(1,j) + abit, node_xy(2,j) + abit, num2str(j) ); end end xlabel ( '--X axis--' ) ylabel ( '--Y axis--' ) % % The TITLE function will interpret underscores in the title. % We need to unescape such escape sequences! % title_string = s_escape_tex ( prefix ); title ( title_string ) axis ( [ x_min, x_max, y_min, y_max ] ); axis equal % axis tight hold off return end function table = r8mat_data_read ( input_filename, m, n ) %*****************************************************************************80 % %% R8MAT_DATA_READ reads data from an R8MAT file. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 27 January 2006 % % Author: % % John Burkardt % % Parameters: % % Input, string INPUT_FILENAME, the name of the input file. % % Input, integer M, N, the number of rows and columns of data. % % Output, real TABLE(M,N), the point coordinates. % table = zeros ( m, n ); % % Build up the format string for reading M real numbers. % string = ' '; for i = 0 : m string = strcat ( string, ' %f' ); end input_unit = fopen ( input_filename ); if ( input_unit < 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'R8MAT_DATA_READ - Error!\n' ); fprintf ( 1, ' Could not open the file.\n' ); error ( 'R8MAT_DATA_READ - Error!' ); end i = 0; while ( i < n ) line = fgets ( input_unit ); if ( line == -1 ) break; end if ( line(1) == '#' ) elseif ( s_len_trim ( line ) == 0 ) else [ x, count ] = sscanf ( line, string ); if ( count == m ) i = i + 1; table(1:m,i) = x(1:m); end end end fclose ( input_unit ); return end function [ m, n ] = r8mat_header_read ( input_filename ) %*****************************************************************************80 % %% R8MAT_HEADER_READ reads the header from an R8MAT file. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 22 October 2004 % % Author: % % John Burkardt % % Parameters: % % Input, string INPUT_FILENAME, the name of the input file. % % Output, integer M, the spatial dimension. % % Output, integer N, the number of points. % m = file_column_count ( input_filename ); if ( m <= 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'R8MAT_HEADER_READ - Fatal error!\n' ); fprintf ( 1, ' There was some kind of I/O problem while trying\n' ); fprintf ( 1, ' to count the number of data columns in\n' ); fprintf ( 1, ' the file %s.\n', input_filename ); end n = file_row_count ( input_filename ); if ( n <= 0 ) fprintf ( 1, '\n' ); fprintf ( 1, 'R8MAT_HEADER_READ - Fatal error!\n' ); fprintf ( 1, ' There was some kind of I/O problem while trying\n' ); fprintf ( 1, ' to count the number of data rows in\n' ); fprintf ( 1, ' the file %s\n', input_filename ); end return end function r8mat_transpose_print_some ( m, n, a, ilo, jlo, ihi, jhi, title ) %*****************************************************************************80 % %% R8MAT_TRANSPOSE_PRINT_SOME prints some of an R8MAT, transposed. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 23 May 2005 % % Author: % % John Burkardt % % Parameters: % % Input, integer M, N, the number of rows and columns. % % Input, real A(M,N), an M by N matrix to be printed. % % Input, integer ILO, JLO, the first row and column to print. % % Input, integer IHI, JHI, the last row and column to print. % % Input, string TITLE, an optional title. % incx = 5; if ( 0 < s_len_trim ( title ) ) fprintf ( 1, '\n' ); fprintf ( 1, '%s\n', title ); end for i2lo = max ( ilo, 1 ) : incx : min ( ihi, m ) i2hi = i2lo + incx - 1; i2hi = min ( i2hi, m ); i2hi = min ( i2hi, ihi ); inc = i2hi + 1 - i2lo; fprintf ( 1, '\n' ); fprintf ( 1, ' Row: ' ); for i = i2lo : i2hi fprintf ( 1, '%7d ', i ); end fprintf ( 1, '\n' ); fprintf ( 1, ' Col\n' ); j2lo = max ( jlo, 1 ); j2hi = min ( jhi, n ); for j = j2lo : j2hi fprintf ( 1, '%5d ', j ); for i2 = 1 : inc i = i2lo - 1 + i2; fprintf ( 1, '%12f', a(i,j) ); end fprintf ( 1, '\n' ); end end return end function s2 = s_escape_tex ( s1 ) %*****************************************************************************80 % %% S_ESCAPE_TEX de-escapes TeX escape sequences. % % Discussion: % % In particular, every occurrence of the characters '\', '_', % '^', '{' and '}' will be replaced by '\\', '\_', '\^', % '\{' and '\}'. A TeX interpreter, on seeing these character % strings, is then likely to return the original characters. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 19 January 2007 % % Author: % % John Burkardt % % Parameters: % % Input, string S1, the string to be de-escaped. % % Output, string S2, a copy of the string, modified to avoid TeX escapes. % s1_length = length ( s1 ); s1_pos = 0; s2_pos = 0; s2 = []; while ( s1_pos < s1_length ) s1_pos = s1_pos + 1; if ( s1(s1_pos) == '\' || ... s1(s1_pos) == '_' || ... s1(s1_pos) == '^' || ... s1(s1_pos) == '{' || ... s1(s1_pos) == '}' ) s2_pos = s2_pos + 1; s2 = strcat ( s2, '\' ); end s2_pos = s2_pos + 1; s2 = strcat ( s2, s1(s1_pos) ); end return end function len = s_len_trim ( s ) %*****************************************************************************80 % %% S_LEN_TRIM returns the length of a character string to the last nonblank. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 14 June 2003 % % Author: % % John Burkardt % % Parameters: % % Input, string S, the string to be measured. % % Output, integer LEN, the length of the string up to the last nonblank. % len = length ( s ); while ( 0 < len ) if ( s(len) ~= ' ' ) return end len = len - 1; end return end function word_num = s_word_count ( s ) %*****************************************************************************80 % %% S_WORD_COUNT counts the number of "words" in a string. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 30 January 2006 % % Author: % % John Burkardt % % Parameters: % % Input, string S, the string to be examined. % % Output, integer WORD_NUM, the number of "words" in the string. % Words are presumed to be separated by one or more blanks. % FALSE = 0; TRUE = 1; word_num = 0; s_length = length ( s ); if ( s_length <= 0 ) return; end blank = TRUE; for i = 1 : s_length if ( s(i) == ' ' ) blank = TRUE; elseif ( blank == TRUE ) word_num = word_num + 1; blank = FALSE; end end return end function timestamp ( ) %*****************************************************************************80 % %% TIMESTAMP prints the current YMDHMS date as a timestamp. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 14 February 2003 % % Author: % % John Burkardt % t = now; c = datevec ( t ); s = datestr ( c, 0 ); fprintf ( 1, '%s\n', s ); return end