{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# List of figures\n", "click on the Figure name to access the notebook with the code of that figure\n", "\n", "[Figure 2](src/fig2/fig2ab.py.ipynb) - Action potential and its phase plot for the soma-axon model. Possibility to set sodium or not sodium in the soma\n", "\n", "[Figure 3](src/fig3/fig3.py.ipynb) - local field potential during action potential + intracellular AP in the soma and in the AIS + extracellular AP near soma and AIS\n", "\n", "[Figure 4](src/fig4/fig4b.py.ipynb) - I-V curve and the m variable in the AIS during voltage clamp in the soma-axon model\n", "\n", "[Figure 5](src/fig5/fig5.py.ipynb) - sodium, potassium and axial current during action potential in the AIS in the soma-axon model\n", "\n", "[Figure 6a](src/fig6/fig6a.py.ipynb) - Action potential for different values of intracellular resistivity in the soma-axon model\n", "\n", "[Figure 6b](src/fig6/fig6b.py.ipynb) - I-V curve and the m variable in the AIS during voltage clamp in the soma-axon model for different values of intracellular resistivity\n", "\n", "[Figure 7a](src/fig7/fig7a.py.ipynb) - Action potential and its phase plot for different size of the soma in the soma-axon model\n", "\n", "[Figure 7b](src/fig7/fig7b.py.ipynb) - I-V curve and the m variable in the AIS during voltage clamp for different size of the soma in the soma-axon model\n", "\n", "[Figure 7c](src/fig7/fig7c.py.ipynb) - voltage in different segments of the neuron during specific voltage value of the action potential in the soma-axon model\n", "\n", "[Figure 7d](src/fig7/fig7d.py.ipynb) - sodium, potassium and axial current during action potential in the AIS in the soma-axon model for different size of the soma in the soma-axon model\n", "\n", "[Figure 8](src/fig8/fig8.py.ipynb) - slope of the phase plot: fastest and at given values for given soma area in the soma-axon model\n", "\n", "[Figure 9a](src/fig9/fig9a.py.ipynb) - action potential and its phase plot in the soma-axon model with different location of AIS\n", "\n", "[Figure 9b](src/fig9/fig9b.py.ipynb) - I-V curve and the m variable in the AIS during voltage clamp in the soma-axon model with different location of AIS" ] } ], "metadata": { "kernelspec": { "display_name": "Python 2", "language": "python", "name": "python2" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 2 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython2", "version": "2.7.11" } }, "nbformat": 4, "nbformat_minor": 0 }