ALDEx2 ANCOMBC ape biclust BiocBook BiocManager BiocParallel Biostrings bluster caret circlize cluster cobiclust ComplexHeatmap corpcor cowplot curatedMetagenomicData dada2 dendextend devtools DirichletMultinomial dplyr DT factoextra fido forcats ggdag ggExtra ggplot2 ggpubr ggtree glmnet glue grid gsEasy gt gtools igraph IntegratedLearner knitr Maaslin2 maaslin3 mediation mia miaTime miaViz microbiome microbiomeDataSets MicrobiomeStat mikropml MMUPHin MOFA2 multiview NbClust NetCoMi NMF patchwork phyloseq plotly plotROC purrr qgraph RColorBrewer rebook reshape2 reticulate rgl scales scater scuttle sechm sessioninfo shadowtext SpiecEasi SPRING stats stringr SuperLearner tidyverse topGO vegan WGCNA xgboost