chr1 0 10000 telomere chr1 248946422 248956422 telomere chr10 0 10000 telomere chr10 133787422 133797422 telomere chr11 0 10000 telomere chr11 135076622 135086622 telomere chr12 0 10000 telomere chr12 133265309 133275309 telomere chr13 0 10000 telomere chr13 114354328 114364328 telomere chr14 0 10000 telomere chr14 107033718 107043718 telomere chr15 0 10000 telomere chr15 101981189 101991189 telomere chr16 0 10000 telomere chr16 90328345 90338345 telomere chr17 0 10000 telomere chr17 83247441 83257441 telomere chr18 0 10000 telomere chr18 80363285 80373285 telomere chr19 0 10000 telomere chr19 58607616 58617616 telomere chr2 0 10000 telomere chr2 242183529 242193529 telomere chr20 0 10000 telomere chr20 64434167 64444167 telomere chr21 0 10000 telomere chr21 46699983 46709983 telomere chr22 0 10000 telomere chr22 50808468 50818468 telomere chr3 0 10000 telomere chr3 198285559 198295559 telomere chr4 0 10000 telomere chr4 190204555 190214555 telomere chr5 0 10000 telomere chr5 181528259 181538259 telomere chr6 0 10000 telomere chr6 170795979 170805979 telomere chr7 0 10000 telomere chr7 159335973 159345973 telomere chr8 0 10000 telomere chr8 145128636 145138636 telomere chr9 0 10000 telomere chr9 138384717 138394717 telomere chrX 0 10000 telomere chrX 156030895 156040895 telomere chrY 0 10000 telomere chrY 57217415 57227415 telomere chr1 122026460 125184587 centromere chr2 92188146 94090557 centromere chr3 90772459 93655574 centromere chr4 49708101 51743951 centromere chr5 46485901 50059807 centromere chr6 58553889 59829934 centromere chr7 58169654 60828234 centromere chr7 61377789 61528020 hetrochromatin chr8 44033745 45877265 centromere chr9 43236168 45518558 centromere chr10 39686683 41593521 centromere chr11 51078349 54425074 centromere chr12 34769408 37185252 centromere chr13 16000001 18051248 centromere chr14 16000001 18173523 centromere chr15 17000001 19725254 centromere chr16 36311159 38280682 centromere chr17 22813680 26885980 centromere chr18 15460900 20861206 centromere chr19 24498981 27190874 centromere chr20 26436233 30038348 centromere chr21 10864561 12915808 centromere chr22 12954789 15054318 centromere chrX 58605580 62412542 centromere chrY 10001 2781479 PAR chrY 10316945 10544039 centromere chrY 56887903 57217415 PAR chr1 125184587 143184587 heterochromatin chr11 50871348 51078348 heterochromatin chr13 18051248 18071248 heterochromatin chr16 38280682 46280682 heterochromatin chr19 24448980 24498980 heterochromatin chr19 27190874 27240874 heterochromatin chr2 90402511 91402511 heterochromatin chr21 10814560 10864560 heterochromatin chr7 62456779 62506779 heterochromatin chr9 45518558 60518558 heterochromatin chrY 26673214 56673214 heterochromatin chr1 629069 634991 High_Mappability_island 1000 . chr1 788756 791663 Satellite_repeat 1000 . chr1 889626 889735 BSR/Beta 1000 . chr1 2651895 2702781 Low_mappability_island 1000 . chr1 4303004 4303182 (CATTC)n 1000 . chr1 5665806 5676591 Low_mappability_island 1000 . chr1 16513428 16514901 Low_mappability_island 1000 . chr1 91387228 91387590 LSU-rRNA_Hsa 1000 . chr1 103621102 103621238 Low_mappability_island 1000 . chr1 107570350 107571085 LSU-rRNA_Hsa 1000 . chr1 121609676 121743636 centromeric_repeat 1000 . chr4_GL000008v2_random 0 7647 Satellite_repeat 1000 . chr4_GL000008v2_random 187822 188534 Low_mappability_island 1000 . chrUn_KI270742v1 11591 12281 Low_mappability_island 1000 . chrUn_KI270742v1 54800 56311 Low_mappability_island 1000 . chr21 8805988 8815925 centromeric_repeat 1000 . chr1 146160622 146161086 LSU-rRNA_Hsa 1000 . chr1 156216378 156216921 High_Mappability_island 1000 . chr1 224011688 224016558 Satellite_repeat 1000 . chr1 233182721 233182770 (CATTC)n 1000 . chr1 236097066 236097521 Low_mappability_island 1000 . chr1 237603008 237603464 LSU-rRNA_Hsa 1000 . chr1 237942045 237942211 Low_mappability_island 1000 . chr1 237944725 237945078 Low_mappability_island 1000 . chr1 237945345 237946397 Low_mappability_island 1000 . chr1 10468 11447 TAR1 1000 . chr1 629083 634924 chrM 1000 . chr1 788757 791646 (GAATG)n 1000 . chr1 889626 889735 BSR/Beta 1000 . chr1 1883668 1883765 LSU-rRNA_Hsa 1000 . chr1 3722660 3723183 TAR1 1000 . chr1 4303004 4303182 (CATTC)n 1000 . chr1 4357038 4357151 LSU-rRNA_Hsa 1000 . chr1 16066614 16066641 (GAATG)n 1000 . chr1 17235559 17235709 TAR1 1000 . chr1 17241506 17241702 (GAATG)n 1000 . chr1 22372914 22372982 (GAATG)n 1000 . chr1 25157017 25157130 LSU-rRNA_Hsa 1000 . chr1 27916098 27916169 LSU-rRNA_Hsa 1000 . chr1 30329251 30329330 LSU-rRNA_Hsa 1000 . chr1 30781172 30781321 (GAGTG)n 1000 . chr1 32367668 32367748 SSU-rRNA_Hsa 1000 . chr1 36849904 36849967 LSU-rRNA_Hsa 1000 . chr1 38888816 38888864 LSU-rRNA_Hsa 1000 . chr1 42313627 42313800 LSU-rRNA_Hsa 1000 . chr1 42580101 42580502 LSU-rRNA_Hsa 1000 . chr1 42749792 42749972 LSU-rRNA_Hsa 1000 . chr1 46436796 46436894 LSU-rRNA_Hsa 1000 . chr1 57815384 57815447 (GAATG)n 1000 . chr1 65147482 65147506 (GAGTG)n 1000 . chr1 67992807 67992951 SSU-rRNA_Hsa 1000 . chr1 67996224 67996791 SSU-rRNA_Hsa 1000 . chr1 75774651 75774785 LSU-rRNA_Hsa 1000 . chr1 82233557 82233772 ALR/Alpha 1000 . chr1 91387228 91387590 LSU-rRNA_Hsa 1000 . chr1 92507170 92507245 LSU-rRNA_Hsa 1000 . chr1 99806382 99806535 SSU-rRNA_Hsa 1000 . chr1 102771857 102772102 TAR1 1000 . chr1 103860551 103874404 ALR/Alpha 1000 . chr1 107570449 107571107 LSU-rRNA_Hsa 1000 . chr1 109243558 109243671 LSU-rRNA_Hsa 1000 . chr1 110080049 110080241 (CATTC)n 1000 . chr1 110254894 110254926 (CATTC)n 1000 . chr1 120001260 120001502 LSU-rRNA_Hsa 1000 . chr1 121609789 121734418 ALR/Alpha 1000 . chr1 121736570 121743631 ALR/Alpha 1000 . chr4_GL000008v2_random 170 7573 (GAATG)n 1000 . chrUn_KI270742v1 11605 12095 chrM 1000 . chrUn_KI270742v1 185999 186698 (CATTC)n 1000 . chr1_KI270706v1_random 125462 125930 chrM 1000 . chr21 8809074 8811218 ACRO1 1000 . chr21 8806190 8806446 ACRO1 1000 . chr14_GL000009v2_random 1889 2374 chrM 1000 . chr1 146160703 146160945 LSU-rRNA_Hsa 1000 . chr1 145491074 145491094 HSATII 1000 . chr1 147809469 147809526 (GAGTG)n 1000 . chr1 143424634 143425197 TAR1 1000 . chr1 150266793 150266884 LSU-rRNA_Hsa 1000 . chr1 157170022 157170097 LSU-rRNA_Hsa 1000 . chr1 166671059 166671122 LSU-rRNA_Hsa 1000 . chr1 168826658 168826801 SSU-rRNA_Hsa 1000 . chr1 169909550 169909779 LSU-rRNA_Hsa 1000 . chr1 173721645 173721806 LSU-rRNA_Hsa 1000 . chr1 182212452 182212502 LSU-rRNA_Hsa 1000 . chr1 200459650 200459784 LSU-rRNA_Hsa 1000 . chr1 201255911 201258449 (GAGTG)n 1000 . chr1 209228715 209228788 (GAATG)n 1000 . chr1 210465915 210466088 (GAATG)n 1000 . chr1 211625710 211625774 LSU-rRNA_Hsa 1000 . chr1 211626541 211626724 LSU-rRNA_Hsa 1000 . chr1 220095980 220096016 (GAATG)n 1000 . chr1 222349426 222349537 LSU-rRNA_Hsa 1000 . chr1 223019176 223019197 (CATTC)n 1000 . chr1 223207933 223208014 ALR/Alpha 1000 . chr1 224011690 224016551 (GAATG)n 1000 . chr1 227686574 227686655 BSR/Beta 1000 . chr1 231374319 231374512 LSU-rRNA_Hsa 1000 . chr1 233182729 233182752 (CATTC)n 1000 . chr1 237603008 237603464 LSU-rRNA_Hsa 1000 . chr1 237940775 237946327 chrM 1000 . chr1 237947075 237947309 chrM 1000 . chr1 241945558 241945689 LSU-rRNA_Hsa 1000 . chr1 247275660 247276439 (GAATG)n 1000 . chr1 247277134 247277235 (GAGTG)n 1000 . chr1 248943911 248945639 TAR1 1000 . chr10 18552604 18573538 (CATTC)n 1000 . chr10 19746732 19748242 Low_mappability_island 1000 . chr10 36433354 36434722 Low_mappability_island 1000 . chr10 38483349 38529907 Satellite_repeat 1000 . chr10 38575761 38595894 Satellite_repeat 1000 . chr10 38783384 38861804 Satellite_repeat 1000 . chr10 41693521 41885273 centromeric_repeat 1000 . chr10 42097571 42106634 Satellite_repeat 1000 . chr10 42097572 42106662 Satellite_repeat 1000 . chr10 42165816 42172175 Satellite_repeat 1000 . chr10 42295074 42322950 Satellite_repeat 1000 . chr10 133761324 133765391 Satellite_repeat 1000 . chr10 707852 707956 ALR/Alpha 1000 . chr10 5299783 5299910 LSU-rRNA_Hsa 1000 . chr10 7722946 7723256 (GAGTG)n 1000 . chr10 9164326 9164407 LSU-rRNA_Hsa 1000 . chr10 17653219 17653379 ALR/Alpha 1000 . chr10 18552604 18573538 (CATTC)n 1000 . chr10 31833072 31833125 LSU-rRNA_Hsa 1000 . chr10 32410318 32410698 LSU-rRNA_Hsa 1000 . chr10 35081948 35082013 LSU-rRNA_Hsa 1000 . chr10 36428323 36428410 (GAATG)n 1000 . chr10 37609124 37609214 (GAATG)n 1000 . chr10 37834967 37835020 LSU-rRNA_Hsa 1000 . chr10 38483412 38529905 (GAATG)n 1000 . chr10 38575755 38595698 (GAATG)n 1000 . chr10 38615465 38615829 TAR1 1000 . chr10 38783477 38861802 (CATTC)n 1000 . chr10 41818668 41885271 (CATTC)n 1000 . chr10 41806184 41817449 ALR/Alpha 1000 . chr10 41803897 41804099 ALR/Alpha 1000 . chr10 41776482 41797910 ALR/Alpha 1000 . chr10 41755350 41775379 ALR/Alpha 1000 . chr10 41716256 41749398 ALR/Alpha 1000 . chr10 41714153 41714418 ALR/Alpha 1000 . chr10 41693523 41713187 ALR/Alpha 1000 . chr10 42097571 42106634 HSATII 1000 . chr10 42165830 42172160 (GAATG)n 1000 . chr10 42295121 42322914 (CATTC)n 1000 . chr10 49702990 49703373 LSU-rRNA_Hsa 1000 . chr10 53883462 53883591 LSU-rRNA_Hsa 1000 . chr10 55599856 55600004 LSU-rRNA_Hsa 1000 . chr10 57785668 57785709 TAR1 1000 . chr10 57786341 57786646 TAR1 1000 . chr10 59688077 59688370 LSU-rRNA_Hsa 1000 . chr10 67045452 67045738 LSU-rRNA_Hsa 1000 . chr10 69010398 69010533 LSU-rRNA_Hsa 1000 . chr10 70826285 70826318 (CATTC)n 1000 . chr10 72939325 72939731 ALR/Alpha 1000 . chr10 74227074 74227140 LSU-rRNA_Hsa 1000 . chr10 77314021 77314056 (GAATG)n 1000 . chr10 77969913 77969998 LSU-rRNA_Hsa 1000 . chr10 78916271 78916304 (CATTC)n 1000 . chr10 89877489 89877518 LSU-rRNA_Hsa 1000 . chr10 99439054 99439121 LSU-rRNA_Hsa 1000 . chr10 100057382 100057901 chrM 1000 . chr10 104646766 104646851 LSU-rRNA_Hsa 1000 . chr10 107285590 107285653 (CATTC)n 1000 . chr10 118181645 118181734 (GAATG)n 1000 . chr10 120529693 120529758 LSU-rRNA_Hsa 1000 . chr10 127443371 127443525 TAR1 1000 . chr10 132358411 132358961 (GAGTG)n 1000 . chr10 132752465 132752635 (GAGTG)n 1000 . chr10 133761838 133765380 BSR/Beta 1000 . chr10 133785429 133787062 TAR1 1000 . chr11 6810438 6810607 ALR/Alpha 1000 . chr11 10507856 10510422 Low_mappability_island 1000 . chr11 48649892 48880854 centromeric_repeat 1000 . chr11 48909690 48942463 centromeric_repeat 1000 . chr11 50359300 50821348 centromeric_repeat 1000 . chr11 54745213 55026708 centromeric_repeat 1000 . chr11 54525074 54552037 centromeric_repeat 1000 . chr11 54926731 55260499 centromeric_repeat 1000 . chr11 73510615 73510901 Low_mappability_island 1000 . chr11 85483869 85484278 LSU-rRNA_Hsa 1000 . chr11 87813576 87814113 Low_mappability_island 1000 . chr11 103404856 103411001 Low_mappability_island 1000 . chr11 123003579 123003735 Low_mappability_island 1000 . chr11 189419 190691 TAR1 1000 . chr11 1736521 1736857 (GAGTG)n 1000 . chr11 6810438 6810607 ALR/Alpha 1000 . chr11 10507886 10508295 chrM 1000 . chr11 10509897 10510336 chrM 1000 . chr11 13263923 13264095 SSU-rRNA_Hsa 1000 . chr11 18749160 18749279 LSU-rRNA_Hsa 1000 . chr11 22480838 22480980 LSU-rRNA_Hsa 1000 . chr11 23588828 23588939 TAR1 1000 . chr11 38411518 38411653 TAR1 1000 . chr11 40261218 40261249 LSU-rRNA_Hsa 1000 . chr11 40534668 40534760 ALR/Alpha 1000 . chr11 40842869 40843047 ALR/Alpha 1000 . chr11 48649997 48652778 ALR/Alpha 1000 . chr11 48658519 48677880 ALR/Alpha 1000 . chr11 48681470 48683044 ALR/Alpha 1000 . chr11 48689147 48699796 ALR/Alpha 1000 . chr11 48702505 48729272 ALR/Alpha 1000 . chr11 48732277 48733988 ALR/Alpha 1000 . chr11 48740033 48744637 ALR/Alpha 1000 . chr11 48750716 48761411 ALR/Alpha 1000 . chr11 48765839 48771634 ALR/Alpha 1000 . chr11 48774452 48799944 ALR/Alpha 1000 . chr11 48804616 48847286 ALR/Alpha 1000 . chr11 48855313 48864379 ALR/Alpha 1000 . chr11 48865288 48879441 ALR/Alpha 1000 . chr11 48909739 48927712 ALR/Alpha 1000 . chr11 48931187 48942428 ALR/Alpha 1000 . chr11 50113121 50118691 ALR/Alpha 1000 . chr11 50359902 50383787 ALR/Alpha 1000 . chr11 50384796 50386583 ALR/Alpha 1000 . chr11 50390022 50399923 ALR/Alpha 1000 . chr11 50400940 50407888 ALR/Alpha 1000 . chr11 50423365 50438108 ALR/Alpha 1000 . chr11 50448001 50458485 ALR/Alpha 1000 . chr11 50459905 50471793 ALR/Alpha 1000 . chr11 50475908 50487840 ALR/Alpha 1000 . chr11 50495622 50497403 ALR/Alpha 1000 . chr11 50499920 50508438 ALR/Alpha 1000 . chr11 50514446 50546485 ALR/Alpha 1000 . chr11 50549062 50552848 ALR/Alpha 1000 . chr11 50554412 50560212 ALR/Alpha 1000 . chr11 50562916 50629510 ALR/Alpha 1000 . chr11 50637581 50648001 ALR/Alpha 1000 . chr11 50650078 50654028 ALR/Alpha 1000 . chr11 50654657 50694425 ALR/Alpha 1000 . chr11 50700608 50703265 ALR/Alpha 1000 . chr11 50709443 50713018 ALR/Alpha 1000 . chr11 50713933 50722992 ALR/Alpha 1000 . chr11 50725665 50742980 ALR/Alpha 1000 . chr11 50751273 50813349 ALR/Alpha 1000 . chr11 55021432 55026705 ALR/Alpha 1000 . chr11 54991157 55017523 ALR/Alpha 1000 . chr11 54970209 54987587 ALR/Alpha 1000 . chr11 54963301 54968221 ALR/Alpha 1000 . chr11 54955800 54962685 ALR/Alpha 1000 . chr11 54952990 54954813 ALR/Alpha 1000 . chr11 54896329 54946966 ALR/Alpha 1000 . chr11 54873594 54893405 ALR/Alpha 1000 . chr11 54855949 54870744 ALR/Alpha 1000 . chr11 54851079 54854938 ALR/Alpha 1000 . chr11 54844825 54845092 ALR/Alpha 1000 . chr11 54837301 54837871 ALR/Alpha 1000 . chr11 54803653 54832351 ALR/Alpha 1000 . chr11 54790601 54797614 ALR/Alpha 1000 . chr11 54782357 54784875 ALR/Alpha 1000 . chr11 54766190 54781379 ALR/Alpha 1000 . chr11 54745385 54758705 ALR/Alpha 1000 . chr11 54525074 54552037 ALR/Alpha 1000 . chr11 54926731 54946966 ALR/Alpha 1000 . chr11 54952990 54954813 ALR/Alpha 1000 . chr11 54955800 54962685 ALR/Alpha 1000 . chr11 54963301 54968221 ALR/Alpha 1000 . chr11 54970209 54987587 ALR/Alpha 1000 . chr11 54991157 55017523 ALR/Alpha 1000 . chr11 55021432 55043729 ALR/Alpha 1000 . chr11 55044481 55084368 ALR/Alpha 1000 . chr11 55090551 55108493 ALR/Alpha 1000 . chr11 55111883 55127859 ALR/Alpha 1000 . chr11 55130860 55132715 ALR/Alpha 1000 . chr11 55138859 55166986 ALR/Alpha 1000 . chr11 55173667 55198337 ALR/Alpha 1000 . chr11 55199488 55201670 ALR/Alpha 1000 . chr11 55202323 55208963 ALR/Alpha 1000 . chr11 55210567 55234324 ALR/Alpha 1000 . chr11 55238991 55260154 ALR/Alpha 1000 . chr11 68231575 68231970 LSU-rRNA_Hsa 1000 . chr11 72447193 72447224 (CATTC)n 1000 . chr11 73510660 73510823 chrM 1000 . chr11 73792053 73792320 LSU-rRNA_Hsa 1000 . chr11 75192580 75193129 (GAATG)n 1000 . chr11 76147465 76147640 LSU-rRNA_Hsa 1000 . chr11 77886427 77886785 LSU-rRNA_Hsa 1000 . chr11 83104910 83104993 LSU-rRNA_Hsa 1000 . chr11 85081561 85081802 SSU-rRNA_Hsa 1000 . chr11 85431078 85431183 ALR/Alpha 1000 . chr11 85483967 85484263 LSU-rRNA_Hsa 1000 . chr11 86035270 86035395 LSU-rRNA_Hsa 1000 . chr11 86044279 86044577 LSU-rRNA_Hsa 1000 . chr11 86535320 86535470 SSU-rRNA_Hsa 1000 . chr11 94720066 94720199 LSU-rRNA_Hsa 1000 . chr11 102717123 102717192 (CATTC)n 1000 . chr11 103408915 103409080 LSU-rRNA_Hsa 1000 . chr11 103423180 103423252 (GAATG)n 1000 . chr11 111821183 111822024 LSU-rRNA_Hsa 1000 . chr11 129408902 129409123 LSU-rRNA_Hsa 1000 . chr11 135075694 135076563 TAR1 1000 . chr12 20551351 20551649 SSU-rRNA_Hsa 1000 . chr12 34219380 34219890 LSU-rRNA_Hsa 1000 . chr12 34279195 34703759 centromeric_repeat 1000 . chr12 37595645 38048026 centromeric_repeat 1000 . chr12 38137574 38138128 LSU-rRNA_Hsa 1000 . chr12 41363581 41363743 Low_mappability_island 1000 . chr12 127165862 127166530 LSU-rRNA_Hsa 1000 . chr12 131576775 131577501 Low_mappability_island 1000 . chr12 10581 11592 TAR1 1000 . chr12 415156 415207 ALR/Alpha 1000 . chr12 13526337 13526726 (GAATG)n 1000 . chr12 18358244 18358457 LSU-rRNA_Hsa 1000 . chr12 19773210 19773369 LSU-rRNA_Hsa 1000 . chr12 20551423 20551588 SSU-rRNA_Hsa 1000 . chr12 27689350 27689489 TAR1 1000 . chr12 30734758 30734818 SSU-rRNA_Hsa 1000 . chr12 34219380 34219890 LSU-rRNA_Hsa 1000 . chr12 34279093 34286134 ALR/Alpha 1000 . chr12 34407378 34425495 ALR/Alpha 1000 . chr12 34426382 34428053 ALR/Alpha 1000 . chr12 34428663 34430990 ALR/Alpha 1000 . chr12 34436377 34446030 ALR/Alpha 1000 . chr12 34447014 34461078 ALR/Alpha 1000 . chr12 34463020 34464045 ALR/Alpha 1000 . chr12 34470194 34476299 ALR/Alpha 1000 . chr12 34482476 34521107 ALR/Alpha 1000 . chr12 34530751 34575278 ALR/Alpha 1000 . chr12 34578355 34580564 ALR/Alpha 1000 . chr12 34581950 34595727 ALR/Alpha 1000 . chr12 34608123 34608358 ALR/Alpha 1000 . chr12 34614658 34619618 ALR/Alpha 1000 . chr12 34621307 34621719 ALR/Alpha 1000 . chr12 34629271 34629503 ALR/Alpha 1000 . chr12 34631712 34639542 ALR/Alpha 1000 . chr12 34645673 34667070 ALR/Alpha 1000 . chr12 34673111 34703749 ALR/Alpha 1000 . chr12 37522027 37532030 ALR/Alpha 1000 . chr12 37536328 37540197 ALR/Alpha 1000 . chr12 37596073 37660766 ALR/Alpha 1000 . chr12 37666748 37681608 ALR/Alpha 1000 . chr12 37687761 37738087 ALR/Alpha 1000 . chr12 37739067 37761698 ALR/Alpha 1000 . chr12 37767610 37777206 ALR/Alpha 1000 . chr12 37779231 37786906 ALR/Alpha 1000 . chr12 37793056 37813713 ALR/Alpha 1000 . chr12 37815950 37823321 ALR/Alpha 1000 . chr12 37825486 37861308 ALR/Alpha 1000 . chr12 37862115 37865588 ALR/Alpha 1000 . chr12 37869123 37892404 ALR/Alpha 1000 . chr12 37898553 37928456 ALR/Alpha 1000 . chr12 37929274 37943468 ALR/Alpha 1000 . chr12 37945889 37952465 ALR/Alpha 1000 . chr12 37952996 37995531 ALR/Alpha 1000 . chr12 37996554 38028240 ALR/Alpha 1000 . chr12 38031180 38031430 ALR/Alpha 1000 . chr12 38037570 38047493 ALR/Alpha 1000 . chr12 38137574 38138128 LSU-rRNA_Hsa 1000 . chr12 38591746 38592215 ALR/Alpha 1000 . chr12 41774632 41774671 (GAATG)n 1000 . chr12 47936752 47936798 ALR/Alpha 1000 . chr12 48194457 48194525 LSU-rRNA_Hsa 1000 . chr12 54760557 54760579 (GAGTG)n 1000 . chr12 56196913 56196969 LSU-rRNA_Hsa 1000 . chr12 56870568 56870681 LSU-rRNA_Hsa 1000 . chr12 58165548 58165568 (CATTC)n 1000 . chr12 60484263 60484299 LSU-rRNA_Hsa 1000 . chr12 67372866 67373001 LSU-rRNA_Hsa 1000 . chr12 68929058 68929130 LSU-rRNA_Hsa 1000 . chr12 69669255 69669319 LSU-rRNA_Hsa 1000 . chr12 74953560 74953832 LSU-rRNA_Hsa 1000 . chr12 75498064 75498304 LSU-rRNA_Hsa 1000 . chr12 79639801 79639920 (CATTC)n 1000 . chr12 84301126 84301163 (GAATG)n 1000 . chr12 85168918 85168982 LSU-rRNA_Hsa 1000 . chr12 91478985 91479022 (GAATG)n 1000 . chr12 94054962 94055127 LSU-rRNA_Hsa 1000 . chr12 94056424 94056509 LSU-rRNA_Hsa 1000 . chr12 94330467 94330553 SSU-rRNA_Hsa 1000 . chr12 101885317 101885446 LSU-rRNA_Hsa 1000 . chr12 103926071 103926181 SSU-rRNA_Hsa 1000 . chr12 112728563 112728628 LSU-rRNA_Hsa 1000 . chr12 113080582 113080627 (GAATG)n 1000 . chr12 118135833 118135890 LSU-rRNA_Hsa 1000 . chr12 124541009 124541105 (GAGTG)n 1000 . chr12 125409558 125411209 (GAGTG)n 1000 . chr12 127165907 127166442 LSU-rRNA_Hsa 1000 . chr12 127300202 127300325 TAR1 1000 . chr12 129004894 129005460 (GAGTG)n 1000 . chr12 130692717 130692817 (GAATG)n 1000 . chr12 131588254 131588744 (GAGTG)n 1000 . chr12 133264211 133264745 TAR1 1000 . chr13 55971594 55971791 Low_mappability_island 1000 . chr13 109424097 109424435 Low_mappability_island 1000 . chr13 22942487 22942563 (GAATG)n 1000 . chr13 23422199 23424924 ALR/Alpha 1000 . chr13 24364272 24364348 (GAATG)n 1000 . chr13 24522304 24522558 ALR/Alpha 1000 . chr13 29557827 29558089 (GAGTG)n 1000 . chr13 34803974 34804023 SSU-rRNA_Hsa 1000 . chr13 40898734 40898754 (CATTC)n 1000 . chr13 47183830 47183883 (CATTC)n 1000 . chr13 54022324 54022390 LSU-rRNA_Hsa 1000 . chr13 67634480 67634569 LSU-rRNA_Hsa 1000 . chr13 68391738 68391829 LSU-rRNA_Hsa 1000 . chr13 73682343 73682389 (CATTC)n 1000 . chr13 77400132 77400261 ALR/Alpha 1000 . chr13 82392901 82393215 TAR1 1000 . chr13 84683567 84683678 LSU-rRNA_Hsa 1000 . chr13 93923960 93923994 (GAATG)n 1000 . chr13 94634246 94634339 LSU-rRNA_Hsa 1000 . chr13 101658760 101658871 LSU-rRNA_Hsa 1000 . chr13 104197767 104197850 LSU-rRNA_Hsa 1000 . chr13 109424124 109424380 chrM 1000 . chr13 112944327 112944555 SSU-rRNA_Hsa 1000 . chr13 113740972 113741317 TAR1 1000 . chr13 114215875 114216106 BSR/Beta 1000 . chr14 18223523 18280423 centromeric_repeat 1000 . chr14 32484057 32485175 Low_mappability_island 1000 . chr14 84171488 84172694 Low_mappability_island 1000 . chr14 89874958 89875172 SSU-rRNA_Hsa 1000 . chr14 18223528 18272395 ALR/Alpha 1000 . chr14 18274292 18280255 ALR/Alpha 1000 . chr14 18582635 18583187 TAR1 1000 . chr14 19041988 19042995 ALR/Alpha 1000 . chr14 19357022 19358029 ALR/Alpha 1000 . chr14 21729973 21730039 LSU-rRNA_Hsa 1000 . chr14 23517748 23517886 LSU-rRNA_Hsa 1000 . chr14 32484097 32485118 chrM 1000 . chr14 39973068 39973418 TAR1 1000 . chr14 43253792 43253842 LSU-rRNA_Hsa 1000 . chr14 45017218 45017344 LSU-rRNA_Hsa 1000 . chr14 49011209 49011275 LSU-rRNA_Hsa 1000 . chr14 52668926 52669080 ALR/Alpha 1000 . chr14 54956656 54956711 LSU-rRNA_Hsa 1000 . chr14 56212555 56212695 LSU-rRNA_Hsa 1000 . chr14 60622318 60622431 LSU-rRNA_Hsa 1000 . chr14 72217940 72218038 LSU-rRNA_Hsa 1000 . chr14 88130285 88130829 LSU-rRNA_Hsa 1000 . chr14 89875026 89875229 SSU-rRNA_Hsa 1000 . chr14 91270689 91270730 SSU-rRNA_Hsa 1000 . chr14 92477891 92477918 (CATTC)n 1000 . chr14 94919017 94919133 BSR/Beta 1000 . chr14 95366702 95366739 (GAATG)n 1000 . chr14 104479562 104479638 (GAATG)n 1000 . chr14 104729575 104729938 TAR1 1000 . chr14 104855060 104855234 (GAGTG)n 1000 . chr14 105708089 105708155 (GAGTG)n 1000 . chr15 19794747 19838879 centromeric_repeat 1000 . chr15 19794747 19816872 ALR/Alpha 1000 . chr15 19818827 19822778 ALR/Alpha 1000 . chr15 19825377 19829305 ALR/Alpha 1000 . chr15 19830516 19838555 ALR/Alpha 1000 . chr15 20147760 20148412 TAR1 1000 . chr15 20282671 20282966 TAR1 1000 . chr15 21154299 21154934 TAR1 1000 . chr15 24754014 24754330 ALR/Alpha 1000 . chr15 27752093 27752398 LSU-rRNA_Hsa 1000 . chr15 27894585 27895229 BSR/Beta 1000 . chr15 34047874 34047918 LSU-rRNA_Hsa 1000 . chr15 35468364 35468453 SSU-rRNA_Hsa 1000 . chr15 46074609 46075412 LSU-rRNA_Hsa 1000 . chr15 46076006 46076508 LSU-rRNA_Hsa 1000 . chr15 50048922 50049255 TAR1 1000 . chr15 52824033 52824053 (CATTC)n 1000 . chr15 58911445 58911553 SSU-rRNA_Hsa 1000 . chr15 59219763 59219974 ALR/Alpha 1000 . chr15 59324346 59324442 LSU-rRNA_Hsa 1000 . chr15 64390913 64390955 SSU-rRNA_Hsa 1000 . chr15 80153171 80153227 (GAGTG)n 1000 . chr15 87818914 87819021 SSU-rRNA_Hsa 1000 . chr15 93907545 93907896 ALR/Alpha 1000 . chr15 101271056 101271133 LSU-rRNA_Hsa 1000 . chr15 101979519 101980807 TAR1 1000 . chr16 32481715 32559505 ALR/Alpha 1000 . chr16 32578742 32587480 ALR/Alpha 1000 . chr16 33335889 33340089 Low_mappability_island 1000 . chr16 34061888 34220683 centromeric_repeat 1000 . chr16 34946171 34962710 Satellite_repeat 1000 . chr16 35295744 35308261 BSR/Beta 1000 . chr16 35959209 36051430 centromeric_repeat 1000 . chr16 46463727 46466603 Satellite_repeat 1000 . chr16 47504718 47505386 LSU-rRNA_Hsa 1000 . chr16 10058 11142 TAR1 1000 . chr16 3367485 3369049 chrM 1000 . chr16 3369741 3372107 chrM 1000 . chr16 3372636 3372702 chrM 1000 . chr16 5500195 5500255 (CATTC)n 1000 . chr16 6260407 6260490 (GAATG)n 1000 . chr16 12096507 12096586 BSR/Beta 1000 . chr16 13155048 13155277 (GAATG)n 1000 . chr16 23021563 23021738 (GAGTG)n 1000 . chr16 23432352 23432498 LSU-rRNA_Hsa 1000 . chr16 23749940 23750028 SSU-rRNA_Hsa 1000 . chr16 24412873 24412944 LSU-rRNA_Hsa 1000 . chr16 28162145 28162212 LSU-rRNA_Hsa 1000 . chr16 29929955 29930140 SSU-rRNA_Hsa 1000 . chr16 32265190 32265435 BSR/Beta 1000 . chr16 32461821 32462520 TAR1 1000 . chr16 32481715 32559505 ALR/Alpha 1000 . chr16 32560016 32560911 ALR/Alpha 1000 . chr16 32563669 32576983 ALR/Alpha 1000 . chr16 32578742 32587480 ALR/Alpha 1000 . chr16 32588397 32592237 ALR/Alpha 1000 . chr16 32664003 32664248 BSR/Beta 1000 . chr16 33316218 33316463 BSR/Beta 1000 . chr16 33372757 33373002 BSR/Beta 1000 . chr16 33571456 33571747 TAR1 1000 . chr16 33707205 33707604 TAR1 1000 . chr16 34062058 34108438 (GAGTG)n 1000 . chr16 34109985 34118448 ALR/Alpha 1000 . chr16 34160029 34161894 SSU-rRNA_Hsa 1000 . chr16 34165858 34167395 ALR/Alpha 1000 . chr16 34168573 34177435 ALR/Alpha 1000 . chr16 34178988 34196337 ALR/Alpha 1000 . chr16 34197719 34200294 ALR/Alpha 1000 . chr16 34201252 34214324 ALR/Alpha 1000 . chr16 34218875 34220678 ALR/Alpha 1000 . chr16 34946168 34962659 HSATII 1000 . chr16 35295744 35308261 BSR/Beta 1000 . chr16 35326606 35326695 ALR/Alpha 1000 . chr16 35362603 35372085 BSR/Beta 1000 . chr16 35427624 35429770 BSR/Beta 1000 . chr16 35448523 35451021 BSR/Beta 1000 . chr16 35494643 35498198 BSR/Beta 1000 . chr16 35555525 35572628 BSR/Beta 1000 . chr16 35649089 35663751 ALR/Alpha 1000 . chr16 35670298 35672188 ALR/Alpha 1000 . chr16 35673242 35683305 ALR/Alpha 1000 . chr16 35695684 35697819 ALR/Alpha 1000 . chr16 35700860 35710730 ALR/Alpha 1000 . chr16 35755515 35779924 ALR/Alpha 1000 . chr16 35780600 35786195 ALR/Alpha 1000 . chr16 35914875 35923214 ALR/Alpha 1000 . chr16 35923780 35934783 ALR/Alpha 1000 . chr16 35935389 35943703 ALR/Alpha 1000 . chr16 35949849 35952365 ALR/Alpha 1000 . chr16 35959254 35963191 ALR/Alpha 1000 . chr16 35964917 36027458 ALR/Alpha 1000 . chr16 36029937 36047208 ALR/Alpha 1000 . chr16 36049275 36051425 ALR/Alpha 1000 . chr16 46463745 46466582 HSATII 1000 . chr16 47485561 47485607 LSU-rRNA_Hsa 1000 . chr16 47504718 47505386 LSU-rRNA_Hsa 1000 . chr16 50125879 50125941 LSU-rRNA_Hsa 1000 . chr16 55724723 55724921 LSU-rRNA_Hsa 1000 . chr16 55755908 55756062 LSU-rRNA_Hsa 1000 . chr16 55837553 55837738 LSU-rRNA_Hsa 1000 . chr16 55841455 55841743 LSU-rRNA_Hsa 1000 . chr16 71442427 71442454 (GAATG)n 1000 . chr16 80396572 80396801 (GAATG)n 1000 . chr16 81868387 81868711 LSU-rRNA_Hsa 1000 . chr16 85007129 85007457 (GAATG)n 1000 . chr16 86890153 86890347 BSR/Beta 1000 . chr17 19452225 19452783 LSU-rRNA_Hsa 1000 . chr17 19599182 19603460 Low_mappability_island 1000 . chr17 22402679 22405687 centromeric_repeat 1000 . chr17 22519198 22532723 Low_mappability_island 1000 . chr17 22721746 22763679 centromeric_repeat 1000 . chr17 26935984 26941033 Satellite_repeat 1000 . chr17 27088525 27090533 telomeric_repeat 1000 . chr17 32822347 32822963 High_Mappability_island 1000 . chr17 35151095 35151353 LSU-rRNA_Hsa 1000 . chr17 43304153 43305242 High_Mappability_island 1000 . chr17 43386170 43386707 High_Mappability_island 1000 . chr17 43387110 43387647 snRNA 1000 . chr17 43388194 43389920 High_Mappability_island 1000 . chr17 53105677 53106402 Low_mappability_island 1000 . chr17 57791257 57791391 LSU-rRNA_Hsa 1000 . chr17 77161949 77162348 LSU-rRNA_Hsa 1000 . chr17 5502952 5503141 (GAATG)n 1000 . chr17 15708036 15708077 LSU-rRNA_Hsa 1000 . chr17 19452225 19452783 LSU-rRNA_Hsa 1000 . chr17 19453359 19453784 LSU-rRNA_Hsa 1000 . chr17 19598558 19605933 chrM 1000 . chr17 22232052 22239399 ALR/Alpha 1000 . chr17 22240003 22265327 ALR/Alpha 1000 . chr17 22519194 22532515 chrM 1000 . chr17 22658524 22668204 ALR/Alpha 1000 . chr17 22672491 22691637 ALR/Alpha 1000 . chr17 22719155 22719544 ALR/Alpha 1000 . chr17 22721771 22726209 ALR/Alpha 1000 . chr17 22729822 22740478 ALR/Alpha 1000 . chr17 22742224 22763679 ALR/Alpha 1000 . chr17 26935986 26941027 (GAGTG)n 1000 . chr17 27148654 27152444 ALR/Alpha 1000 . chr17 27159570 27160726 ALR/Alpha 1000 . chr17 27162661 27181223 ALR/Alpha 1000 . chr17 27182097 27183018 ALR/Alpha 1000 . chr17 27189082 27197413 ALR/Alpha 1000 . chr17 27198430 27198556 ALR/Alpha 1000 . chr17 32592094 32592219 LSU-rRNA_Hsa 1000 . chr17 34493380 34493513 LSU-rRNA_Hsa 1000 . chr17 35151095 35151353 LSU-rRNA_Hsa 1000 . chr17 40227389 40227456 LSU-rRNA_Hsa 1000 . chr17 44596242 44596281 LSU-rRNA_Hsa 1000 . chr17 53105732 53106385 chrM 1000 . chr17 57791257 57791391 LSU-rRNA_Hsa 1000 . chr17 60040029 60040468 LSU-rRNA_Hsa 1000 . chr17 60526354 60526377 (GAGTG)n 1000 . chr17 62425184 62425262 LSU-rRNA_Hsa 1000 . chr17 63629507 63629563 LSU-rRNA_Hsa 1000 . chr17 72867657 72867747 LSU-rRNA_Hsa 1000 . chr17 73187524 73187574 LSU-rRNA_Hsa 1000 . chr17 76966378 76966434 (GAGTG)n 1000 . chr17 77161949 77162307 LSU-rRNA_Hsa 1000 . chr18 96416 97552 Satellite_repeat 1000 . chr18 105658 112233 Satellite_repeat 1000 . chr18 2842254 2842358 Low_mappability_island 1000 . chr18 15393802 15393993 centromeric_repeat 1000 . chr18 20930937 20940395 centromeric_repeat 1000 . chr18 46546272 46546630 (CATTC)n 1000 . chr18 47853232 47853493 Low_mappability_island 1000 . chr18 52792716 52792931 Low_mappability_island 1000 . chr18 80012846 80013065 LSU-rRNA_Hsa 1000 . chr18 10631 11145 TAR1 1000 . chr18 96416 98320 TAR1 1000 . chr18 105673 111670 BSR/Beta 1000 . chr18 6688464 6688510 (GAATG)n 1000 . chr18 14878926 14879396 TAR1 1000 . chr18 14985082 14985533 TAR1 1000 . chr18 15381635 15390840 ALR/Alpha 1000 . chr18 15392052 15396663 ALR/Alpha 1000 . chr18 15398546 15410899 ALR/Alpha 1000 . chr18 20930940 20940381 ALR/Alpha 1000 . chr18 22276833 22276898 LSU-rRNA_Hsa 1000 . chr18 23611709 23611863 LSU-rRNA_Hsa 1000 . chr18 30635569 30636187 TAR1 1000 . chr18 31768738 31768816 LSU-rRNA_Hsa 1000 . chr18 38950286 38950394 LSU-rRNA_Hsa 1000 . chr18 44642837 44642893 (GAATG)n 1000 . chr18 45936403 45936445 LSU-rRNA_Hsa 1000 . chr18 46546272 46546630 (CATTC)n 1000 . chr18 47853245 47853437 chrM 1000 . chr18 50761587 50761762 LSU-rRNA_Hsa 1000 . chr18 52792742 52792858 (CATTC)n 1000 . chr18 61048702 61048788 LSU-rRNA_Hsa 1000 . chr18 69105938 69106255 (GAGTG)n 1000 . chr18 74577164 74577423 LSU-rRNA_Hsa 1000 . chr18 77670005 77670826 (GAGTG)n 1000 . chr18 80012846 80013065 LSU-rRNA_Hsa 1000 . chr19 246006 247844 TAR1 1000 . chr19 22694812 22694894 SSU-rRNA_Hsa 1000 . chr19 23052228 23052702 BSR/Beta 1000 . chr19 23999596 24003408 LSU-rRNA_Hsa 1000 . chr19 24202672 24448980 centromeric_repeat 1000 . chr19 27240874 27771774 centromeric_repeat 1000 . chr19 35575543 35575908 LSU-rRNA_Hsa 1000 . chr19 36265496 36310046 centromeric_repeat 1000 . chr19 37268571 37306820 centromeric_repeat 1000 . chr19 44410147 44412174 ACRO1 1000 . chr19 44456468 44458468 ACRO1 1000 . chr19 246006 247844 TAR1 1000 . chr19 602098 602470 TAR1 1000 . chr19 6784466 6784810 (CATTC)n 1000 . chr19 6818814 6819378 ALR/Alpha 1000 . chr19 9599846 9599911 (GAATG)n 1000 . chr19 10667731 10667885 LSU-rRNA_Hsa 1000 . chr19 20967096 20973478 BSR/Beta 1000 . chr19 21485734 21486324 BSR/Beta 1000 . chr19 21487701 21498848 BSR/Beta 1000 . chr19 21593330 21597966 BSR/Beta 1000 . chr19 21838913 21847828 BSR/Beta 1000 . chr19 21848482 21851229 BSR/Beta 1000 . chr19 21874188 21880250 BSR/Beta 1000 . chr19 21890552 21893350 BSR/Beta 1000 . chr19 21900095 21903033 BSR/Beta 1000 . chr19 21905629 21911650 BSR/Beta 1000 . chr19 21915213 21924265 BSR/Beta 1000 . chr19 21926892 21936969 BSR/Beta 1000 . chr19 22025692 22036675 BSR/Beta 1000 . chr19 22039727 22050405 BSR/Beta 1000 . chr19 22132935 22137902 BSR/Beta 1000 . chr19 22238585 22246899 BSR/Beta 1000 . chr19 22252447 22260816 BSR/Beta 1000 . chr19 22323178 22324406 BSR/Beta 1000 . chr19 22325365 22352317 BSR/Beta 1000 . chr19 22694812 22694894 SSU-rRNA_Hsa 1000 . chr19 22713717 22733949 BSR/Beta 1000 . chr19 22734982 22738464 BSR/Beta 1000 . chr19 22739369 22740609 BSR/Beta 1000 . chr19 22808980 22810528 BSR/Beta 1000 . chr19 22811056 22826738 BSR/Beta 1000 . chr19 22914239 22920294 BSR/Beta 1000 . chr19 22922580 22925269 BSR/Beta 1000 . chr19 22928611 22930403 BSR/Beta 1000 . chr19 22931129 22936892 BSR/Beta 1000 . chr19 23014691 23026138 BSR/Beta 1000 . chr19 23043263 23043671 BSR/Beta 1000 . chr19 23044442 23057645 BSR/Beta 1000 . chr19 23058290 23069457 BSR/Beta 1000 . chr19 23095024 23103225 BSR/Beta 1000 . chr19 23255430 23262208 BSR/Beta 1000 . chr19 23262777 23264633 BSR/Beta 1000 . chr19 23306170 23322510 BSR/Beta 1000 . chr19 23399578 23403358 BSR/Beta 1000 . chr19 23404123 23408283 BSR/Beta 1000 . chr19 23457896 23464938 BSR/Beta 1000 . chr19 23520214 23525448 BSR/Beta 1000 . chr19 23528447 23532001 BSR/Beta 1000 . chr19 23540669 23547503 BSR/Beta 1000 . chr19 23559115 23560605 BSR/Beta 1000 . chr19 23561314 23565885 BSR/Beta 1000 . chr19 23661157 23661238 ALR/Alpha 1000 . chr19 23688433 23688933 BSR/Beta 1000 . chr19 23768902 23773043 BSR/Beta 1000 . chr19 23773583 23780959 BSR/Beta 1000 . chr19 23781659 23789708 BSR/Beta 1000 . chr19 23888297 23890401 BSR/Beta 1000 . chr19 23896456 23902451 BSR/Beta 1000 . chr19 23906069 23908784 BSR/Beta 1000 . chr19 23974054 23989159 BSR/Beta 1000 . chr19 23994308 23994726 BSR/Beta 1000 . chr19 23999596 24003408 LSU-rRNA_Hsa 1000 . chr19 24049446 24062679 BSR/Beta 1000 . chr19 24063255 24069003 BSR/Beta 1000 . chr19 24069945 24075320 BSR/Beta 1000 . chr19 24076387 24076471 BSR/Beta 1000 . chr19 24181710 24193414 BSR/Beta 1000 . chr19 24195704 24196242 BSR/Beta 1000 . chr19 24197307 24197787 BSR/Beta 1000 . chr19 24202464 24206720 ALR/Alpha 1000 . chr19 24207465 24231646 ALR/Alpha 1000 . chr19 24237392 24242665 ALR/Alpha 1000 . chr19 24251825 24263769 ALR/Alpha 1000 . chr19 24268633 24270231 ALR/Alpha 1000 . chr19 24273547 24277356 ALR/Alpha 1000 . chr19 24278397 24279891 ALR/Alpha 1000 . chr19 24281276 24281361 ALR/Alpha 1000 . chr19 24285921 24320885 ALR/Alpha 1000 . chr19 24325977 24371390 ALR/Alpha 1000 . chr19 24372487 24386665 ALR/Alpha 1000 . chr19 24387613 24394035 ALR/Alpha 1000 . chr19 24399943 24405920 ALR/Alpha 1000 . chr19 24410992 24413732 ALR/Alpha 1000 . chr19 24414940 24448980 ALR/Alpha 1000 . chr19 27240876 27250823 ALR/Alpha 1000 . chr19 27251828 27255397 ALR/Alpha 1000 . chr19 27257916 27270809 ALR/Alpha 1000 . chr19 27271401 27272604 ALR/Alpha 1000 . chr19 27273197 27280542 ALR/Alpha 1000 . chr19 27286414 27294280 ALR/Alpha 1000 . chr19 27297485 27318139 ALR/Alpha 1000 . chr19 27320989 27324361 ALR/Alpha 1000 . chr19 27330342 27346451 ALR/Alpha 1000 . chr19 27348170 27371124 ALR/Alpha 1000 . chr19 27372995 27374603 ALR/Alpha 1000 . chr19 27376222 27392067 ALR/Alpha 1000 . chr19 27392968 27417847 ALR/Alpha 1000 . chr19 27419458 27426021 ALR/Alpha 1000 . chr19 27428466 27461187 ALR/Alpha 1000 . chr19 27462960 27463508 ALR/Alpha 1000 . chr19 27469741 27498969 ALR/Alpha 1000 . chr19 27499634 27500939 ALR/Alpha 1000 . chr19 27504575 27516181 ALR/Alpha 1000 . chr19 27520123 27562371 ALR/Alpha 1000 . chr19 27563223 27578681 ALR/Alpha 1000 . chr19 27582277 27596509 ALR/Alpha 1000 . chr19 27603036 27634013 ALR/Alpha 1000 . chr19 27660732 27669631 ALR/Alpha 1000 . chr19 27680724 27689494 ALR/Alpha 1000 . chr19 27695217 27695436 ALR/Alpha 1000 . chr19 27701588 27703452 ALR/Alpha 1000 . chr19 27712211 27712237 ALR/Alpha 1000 . chr19 27713310 27716272 ALR/Alpha 1000 . chr19 27721192 27733277 ALR/Alpha 1000 . chr19 35575603 35575847 LSU-rRNA_Hsa 1000 . chr19 41563619 41565537 LSU-rRNA_Hsa 1000 . chr19 43406153 43408015 LSU-rRNA_Hsa 1000 . chr19 44410147 44412174 ACRO1 1000 . chr19 44416261 44416406 ACRO1 1000 . chr19 44452262 44453413 ACRO1 1000 . chr19 44456468 44458468 ACRO1 1000 . chr19 44473766 44474394 ACRO1 1000 . chr19 46035822 46035876 ALR/Alpha 1000 . chr19 46232354 46232857 LSU-rRNA_Hsa 1000 . chr19 47663874 47663895 (CATTC)n 1000 . chr19 51783609 51783669 LSU-rRNA_Hsa 1000 . chr19 51830520 51830573 LSU-rRNA_Hsa 1000 . chr19 53654969 53655148 LSU-rRNA_Hsa 1000 . chr19 57581764 57581897 LSU-rRNA_Hsa 1000 . chr19 58605878 58607452 TAR1 1000 . chr2 739925 740994 Low_mappability_island 1000 . chr2 49229590 49229928 Low_mappability_island 1000 . chr2 87824871 87825384 Low_mappability_island 1000 . chr2 89787633 89841704 Satellite_repeat 1000 . chr2_KI270894v1_alt 191156 212068 Satellite_repeat 1000 . chr2 92079402 92138145 centromeric_repeat 1000 . chr2 114937440 114937704 LSU-rRNA_Hsa 1000 . chr2 117023509 117023724 Low_mappability_island 1000 . chr2 132208675 132231727 centromeric_repeat 1000 . chr2 132237282 132250410 ALR/Alpha 1000 . chr2 132254251 132255725 SSU-rRNA_Hsa 1000 . chr2 132278677 132282469 LSU-rRNA_Hsa 1000 . chr2 132286522 132288372 ACRO1 1000 . chr2 143090934 143091223 Low_mappability_island 1000 . chr2 147265168 147265310 Low_mappability_island 1000 . chr2 148881638 148881946 Low_mappability_island 1000 . chr2 155263988 155264098 Low_mappability_island 1000 . chr2 161278489 161282730 Low_mappability_island 1000 . chr2 229180710 229181080 LSU-rRNA_Hsa 1000 . chr2 10585 12198 TAR1 1000 . chr2 5537655 5537679 (CATTC)n 1000 . chr2 5688504 5688527 (GAATG)n 1000 . chr2 16034646 16034697 (GAGTG)n 1000 . chr2 21362491 21362614 TAR1 1000 . chr2 24364499 24364770 LSU-rRNA_Hsa 1000 . chr2 32117321 32117462 LSU-rRNA_Hsa 1000 . chr2 32213934 32214059 ALR/Alpha 1000 . chr2 32529155 32529225 BSR/Beta 1000 . chr2 32844143 32844208 SSU-rRNA_Hsa 1000 . chr2 32853859 32853946 ALR/Alpha 1000 . chr2 35857707 35857754 (GAATG)n 1000 . chr2 37078107 37078165 SSU-rRNA_Hsa 1000 . chr2 50588687 50589394 chrM 1000 . chr2 53843893 53843976 LSU-rRNA_Hsa 1000 . chr2 59603595 59603824 LSU-rRNA_Hsa 1000 . chr2 61665357 61665424 LSU-rRNA_Hsa 1000 . chr2 63208791 63209505 LSU-rRNA_Hsa 1000 . chr2 64875962 64876020 LSU-rRNA_Hsa 1000 . chr2 67129379 67129428 (GAATG)n 1000 . chr2 70431415 70431597 ALR/Alpha 1000 . chr2 78701595 78701866 LSU-rRNA_Hsa 1000 . chr2 81666483 81666725 chrM 1000 . chr2 83670546 83670652 (GAATG)n 1000 . chr2 87348690 87349455 TAR1 1000 . chr2 87492610 87492655 LSU-rRNA_Hsa 1000 . chr2 87824889 87825365 chrM 1000 . chr2 89809778 89841184 HSATII 1000 . chr2 90245033 90245704 TAR1 1000 . chr2 90379545 90402509 HSATII 1000 . chr2_KI270894v1_alt 191192 212066 HSATII 1000 . chr2 91659931 91660477 TAR1 1000 . chr2 91857533 91857959 TAR1 1000 . chr2 92079496 92138145 HSATII 1000 . chr2 94899008 94899476 chrM 1000 . chr2 97886818 97886945 ALR/Alpha 1000 . chr2 97969982 97970002 (CATTC)n 1000 . chr2 98473100 98473351 (GAGTG)n 1000 . chr2 98592213 98592289 LSU-rRNA_Hsa 1000 . chr2 105307242 105307324 TAR1 1000 . chr2 106322361 106322423 TAR1 1000 . chr2 109199330 109199851 (GAATG)n 1000 . chr2 111457570 111457615 LSU-rRNA_Hsa 1000 . chr2 113601976 113602680 TAR1 1000 . chr2 113603477 113604840 TAR1 1000 . chr2 114383778 114383923 ALR/Alpha 1000 . chr2 114937440 114937704 LSU-rRNA_Hsa 1000 . chr2 117021212 117025520 chrM 1000 . chr2 117026134 117026501 chrM 1000 . chr2 120634409 120634438 (CATTC)n 1000 . chr2 121078621 121078952 SSU-rRNA_Hsa 1000 . chr2 124677933 124678133 TAR1 1000 . chr2 126829822 126829955 (GAATG)n 1000 . chr2 127291567 127292289 LSU-rRNA_Hsa 1000 . chr2 129242653 129243683 BSR/Beta 1000 . chr2 131802641 131803123 TAR1 1000 . chr2 131813169 131813660 TAR1 1000 . chr2 132208801 132220276 ALR/Alpha 1000 . chr2 132222864 132231322 ALR/Alpha 1000 . chr2 132237282 132250410 ALR/Alpha 1000 . chr2 132254346 132256195 SSU-rRNA_Hsa 1000 . chr2 132278677 132282469 LSU-rRNA_Hsa 1000 . chr2 132286522 132288372 ACRO1 1000 . chr2 132352194 132352720 TAR1 1000 . chr2 132661442 132661476 (CATTC)n 1000 . chr2 143288144 143288237 BSR/Beta 1000 . chr2 146173263 146173406 LSU-rRNA_Hsa 1000 . chr2 148881725 148881857 chrM 1000 . chr2 152262427 152262475 ALR/Alpha 1000 . chr2 155263464 155264802 chrM 1000 . chr2 155971927 155971972 ALR/Alpha 1000 . chr2 158583879 158584285 LSU-rRNA_Hsa 1000 . chr2 161281901 161282139 ACRO1 1000 . chr2 166830314 166830340 (CATTC)n 1000 . chr2 168533338 168533397 (GAATG)n 1000 . chr2 169343402 169343489 LSU-rRNA_Hsa 1000 . chr2 170152941 170152970 (CATTC)n 1000 . chr2 175820300 175820344 (GAATG)n 1000 . chr2 176843125 176843176 (GAATG)n 1000 . chr2 183362625 183362662 (CATTC)n 1000 . chr2 189619631 189619942 ALR/Alpha 1000 . chr2 190537921 190538060 LSU-rRNA_Hsa 1000 . chr2 192707884 192708008 BSR/Beta 1000 . chr2 200259679 200259794 SSU-rRNA_Hsa 1000 . chr2 202346265 202346374 LSU-rRNA_Hsa 1000 . chr2 202614231 202617810 chrM 1000 . chr2 202618615 202618774 chrM 1000 . chr2 208570880 208570979 TAR1 1000 . chr2 209572462 209572557 LSU-rRNA_Hsa 1000 . chr2 211149869 211149994 LSU-rRNA_Hsa 1000 . chr2 222235623 222235774 LSU-rRNA_Hsa 1000 . chr2 225022326 225022409 SSU-rRNA_Hsa 1000 . chr2 229151036 229151107 LSU-rRNA_Hsa 1000 . chr2 229180771 229181018 LSU-rRNA_Hsa 1000 . chr2 231245354 231245471 LSU-rRNA_Hsa 1000 . chr2 236750049 236750533 TAR1 1000 . chr2 237666976 237667014 ALR/Alpha 1000 . chr2 238125767 238125816 (GAGTG)n 1000 . chr2 240936649 240936830 BSR/Beta 1000 . chr2 242181520 242183304 TAR1 1000 . chr20 26276396 26338933 centromeric_repeat 1000 . chr20 30283034 30286471 centromeric_repeat 1000 . chr20 31216078 31245531 centromeric_repeat 1000 . chr20 57357647 57361058 chrM 1000 . chr20 64285349 64286700 telomeric_repeat 1000 . chr20 996206 996265 (CATTC)n 1000 . chr20 6482564 6482661 (CATTC)n 1000 . chr20 9161798 9161874 ALR/Alpha 1000 . chr20 15259918 15259970 (GAATG)n 1000 . chr20 17489012 17489438 LSU-rRNA_Hsa 1000 . chr20 25965483 25975498 ALR/Alpha 1000 . chr20 25979805 25983680 ALR/Alpha 1000 . chr20 26278104 26289754 ALR/Alpha 1000 . chr20 26290828 26301087 ALR/Alpha 1000 . chr20 26304782 26338928 ALR/Alpha 1000 . chr20 30261638 30263417 ALR/Alpha 1000 . chr20 30263924 30272147 ALR/Alpha 1000 . chr20 30276451 30280302 ALR/Alpha 1000 . chr20 31216084 31245459 (GAATG)n 1000 . chr20 46484134 46484240 LSU-rRNA_Hsa 1000 . chr20 54114348 54114500 (GAGTG)n 1000 . chr20 57357647 57361058 chrM 1000 . chr20 61720451 61720628 (GAGTG)n 1000 . chr20 63220283 63220519 (GAGTG)n 1000 . chr20 64285195 64286699 TAR1 1000 . chr21 8758372 8759696 Low_mappability_island 1000 . chr21 8806063 8816129 centromeric_repeat 1000 . chr21 8986618 8988779 High_Mappability_island 1000 . chr21 8988779 9006400 Low_mappability_island 1000 . chr21 9043062 9043736 TAR1 1000 . chr21 9246089 9249171 Satellite_repeat 1000 . chr21 10014848 10015021 Low_mappability_island 1000 . chr21 10121400 10121887 TAR1 1000 . chr21 10651566 10814560 centromeric_repeat 1000 . chr21 10324327 10326402 Satellite_repeat 1000 . chr21 12965808 12997470 centromeric_repeat 1000 . chr21 17428256 17428678 (GAGTG)n 1000 . chr21 25855692 25855931 SSU-rRNA_Hsa 1000 . chr21 45376166 45376421 Low_mappability_island 1000 . chr21 8652010 8652079 TAR1 1000 . chr21 8806190 8806446 ACRO1 1000 . chr21 8809074 8811218 ACRO1 1000 . chr21 8815384 8816049 TAR1 1000 . chr21 8846717 8847202 chrM 1000 . chr21 8988171 8988745 SSU-rRNA_Hsa 1000 . chr21 8990910 8992613 ACRO1 1000 . chr21 9043062 9043736 TAR1 1000 . chr21 9246110 9249134 (GAATG)n 1000 . chr21 10014854 10015014 chrM 1000 . chr21 10121400 10121887 TAR1 1000 . chr21 10805018 10814559 ALR/Alpha 1000 . chr21 10775851 10803461 ALR/Alpha 1000 . chr21 10745670 10769750 ALR/Alpha 1000 . chr21 10682925 10739647 ALR/Alpha 1000 . chr21 10651738 10682282 (GAATG)n 1000 . chr21 12965814 12997132 ALR/Alpha 1000 . chr21 13359958 13360475 TAR1 1000 . chr21 14047126 14047188 (GAGTG)n 1000 . chr21 14084651 14085264 LSU-rRNA_Hsa 1000 . chr21 17428256 17428678 (GAGTG)n 1000 . chr21 18002470 18002605 LSU-rRNA_Hsa 1000 . chr21 24989013 24989186 (GAGTG)n 1000 . chr21 25855747 25855836 SSU-rRNA_Hsa 1000 . chr21 29782478 29782683 SSU-rRNA_Hsa 1000 . chr21 30453255 30453302 (CATTC)n 1000 . chr21 32030134 32030311 (CATTC)n 1000 . chr21 32907289 32907390 LSU-rRNA_Hsa 1000 . chr21 33323591 33323696 (GAATG)n 1000 . chr21 37264043 37264111 LSU-rRNA_Hsa 1000 . chr21 43708243 43708306 LSU-rRNA_Hsa 1000 . chr21 44395665 44396751 (GAGTG)n 1000 . chr21 46005873 46006430 TAR1 1000 . chr21 46697802 46699841 TAR1 1000 . chr22 16367188 16381997 Satellite_repeat 1000 . chr22 18889276 18896997 Satellite_repeat 1000 . chr22 15764622 15765628 ALR/Alpha 1000 . chr22 15509693 15510245 TAR1 1000 . chr22 16367192 16381813 HSATII 1000 . chr22 16403472 16403898 TAR1 1000 . chr22 17103664 17103846 (GAGTG)n 1000 . chr22 17623078 17623138 LSU-rRNA_Hsa 1000 . chr22 20911103 20911237 LSU-rRNA_Hsa 1000 . chr22 21856255 21856567 LSU-rRNA_Hsa 1000 . chr22 22133989 22139832 ALR/Alpha 1000 . chr22 22297740 22298189 TAR1 1000 . chr22 23355779 23355954 LSU-rRNA_Hsa 1000 . chr22 26736879 26737054 (CATTC)n 1000 . chr22 49123640 49123821 (CATTC)n 1000 . chr22 49405751 49405908 BSR/Beta 1000 . chr22 49602357 49602827 TAR1 1000 . chr3 25467406 25467640 Low_mappability_island 1000 . chr3 73110455 73111980 snRNA 1000 . chr3 75647146 75650153 BSR/Beta 1000 . chr3 75668690 75671275 Satellite_repeat 1000 . chr3 80946707 80965308 ALR/Alpha 1000 . chr3 90262536 90455704 centromeric_repeat 1000 . chr3 93786010 93800289 centromeric_repeat 1000 . chr3 96617090 96618592 Low_mappability_island 1000 . chr3 160947635 160947854 Low_mappability_island 1000 . chr3 196898643 196898989 Satellite_repeat 1000 . chr3 198098556 198107209 Low_mappability_island 1000 . chr3 4909591 4909615 (GAATG)n 1000 . chr3 5363591 5363625 (CATTC)n 1000 . chr3 9134268 9134373 LSU-rRNA_Hsa 1000 . chr3 15303617 15303683 LSU-rRNA_Hsa 1000 . chr3 18229710 18229897 LSU-rRNA_Hsa 1000 . chr3 22863505 22863618 LSU-rRNA_Hsa 1000 . chr3 23726592 23726662 LSU-rRNA_Hsa 1000 . chr3 24021587 24021649 LSU-rRNA_Hsa 1000 . chr3 27847725 27847871 SSU-rRNA_Hsa 1000 . chr3 40826454 40826486 (CATTC)n 1000 . chr3 45453275 45453360 LSU-rRNA_Hsa 1000 . chr3 49076218 49076522 LSU-rRNA_Hsa 1000 . chr3 49950023 49950469 SSU-rRNA_Hsa 1000 . chr3 57814123 57814183 LSU-rRNA_Hsa 1000 . chr3 67834405 67834536 LSU-rRNA_Hsa 1000 . chr3 75647146 75650153 BSR/Beta 1000 . chr3 79109915 79109955 SSU-rRNA_Hsa 1000 . chr3 80946707 80965308 ALR/Alpha 1000 . chr3 80967072 80969440 ALR/Alpha 1000 . chr3 84120198 84120302 LSU-rRNA_Hsa 1000 . chr3 90262815 90264835 ALR/Alpha 1000 . chr3 90268382 90278568 ALR/Alpha 1000 . chr3 90281860 90306892 ALR/Alpha 1000 . chr3 90315291 90320123 ALR/Alpha 1000 . chr3 90321487 90334081 ALR/Alpha 1000 . chr3 90340138 90369376 ALR/Alpha 1000 . chr3 90377106 90382470 ALR/Alpha 1000 . chr3 90388451 90419078 ALR/Alpha 1000 . chr3 90421535 90430657 ALR/Alpha 1000 . chr3 90436681 90455703 ALR/Alpha 1000 . chr3 93786010 93789189 ALR/Alpha 1000 . chr3 93791485 93800115 ALR/Alpha 1000 . chr3 96617187 96618510 chrM 1000 . chr3 96766255 96766591 TAR1 1000 . chr3 97032475 97033035 BSR/Beta 1000 . chr3 99957733 99958059 ALR/Alpha 1000 . chr3 108531246 108531521 LSU-rRNA_Hsa 1000 . chr3 118266922 118267008 LSU-rRNA_Hsa 1000 . chr3 119529395 119529476 LSU-rRNA_Hsa 1000 . chr3 123015841 123015969 LSU-rRNA_Hsa 1000 . chr3 125655611 125669940 ALR/Alpha 1000 . chr3 131417843 131417998 SSU-rRNA_Hsa 1000 . chr3 136984755 136984781 (GAATG)n 1000 . chr3 138709570 138709649 SSU-rRNA_Hsa 1000 . chr3 139082445 139082523 LSU-rRNA_Hsa 1000 . chr3 142053627 142053692 LSU-rRNA_Hsa 1000 . chr3 142054902 142055388 LSU-rRNA_Hsa 1000 . chr3 142665816 142665905 LSU-rRNA_Hsa 1000 . chr3 148650637 148650757 LSU-rRNA_Hsa 1000 . chr3 158982962 158983009 LSU-rRNA_Hsa 1000 . chr3 160428422 160428525 LSU-rRNA_Hsa 1000 . chr3 163901101 163901131 (GAGTG)n 1000 . chr3 173270390 173270539 TAR1 1000 . chr3 174129188 174129290 LSU-rRNA_Hsa 1000 . chr3 179533035 179533204 ALR/Alpha 1000 . chr3 179779555 179779718 LSU-rRNA_Hsa 1000 . chr3 187105326 187105563 ALR/Alpha 1000 . chr3 187393482 187393594 TAR1 1000 . chr3 196176878 196176926 LSU-rRNA_Hsa 1000 . chr3 196898753 196898904 HSATII 1000 . chr4 10000 12694 telomeric_repeat 1000 . chr4 12274839 12290800 ALR/Alpha 1000 . chr4 12640238 12640681 Low_mappability_island 1000 . chr4 21582007 21582096 (GAATG)n 1000 . chr4 27730382 27730618 Low_mappability_island 1000 . chr4 47772251 47772399 Low_mappability_island 1000 . chr4 49083355 49336924 centromeric_repeat 1000 . chr4 49486924 49658100 centromeric_repeat 1000 . chr4 51793951 51822820 centromeric_repeat 1000 . chr4 55328062 55328417 Low_mappability_island 1000 . chr4 64608140 64608223 Low_mappability_island 1000 . chr4 67398468 67401112 centromeric_repeat 1000 . chr4 69430847 69431123 LSU-rRNA_Hsa 1000 . chr4 75885930 75886167 LSU-rRNA_Hsa 1000 . chr4 78008506 78008766 Low_mappability_island 1000 . chr4 155453597 155456074 chrM 1000 . chr4 155463708 155466162 Low_mappability_island 1000 . chr4 162421327 162421592 Low_mappability_island 1000 . chr4 189269592 189282288 Low_mappability_island 1000 . chr4 189880714 189881754 Low_mappability_island 1000 . chr4 190022647 190022807 Satellite_repeat 1000 . chr4 190066113 190069794 Satellite_repeat 1000 . chr4 190105147 190123121 telomeric_repeat 1000 . chr4 10193 12822 TAR1 1000 . chr4 264940 265072 TAR1 1000 . chr4 436459 436586 TAR1 1000 . chr4 477951 478184 TAR1 1000 . chr4 7582459 7582637 LSU-rRNA_Hsa 1000 . chr4 7919398 7919609 ALR/Alpha 1000 . chr4 8342044 8342639 ALR/Alpha 1000 . chr4 10561711 10561834 LSU-rRNA_Hsa 1000 . chr4 12274839 12290800 ALR/Alpha 1000 . chr4 12640293 12640635 chrM 1000 . chr4 16731188 16731259 (GAATG)n 1000 . chr4 17061880 17062164 chrM 1000 . chr4 21534970 21535065 (CATTC)n 1000 . chr4 21582007 21582096 (GAATG)n 1000 . chr4 27730423 27730575 chrM 1000 . chr4 40761089 40761111 (GAATG)n 1000 . chr4 42583616 42583709 SSU-rRNA_Hsa 1000 . chr4 49083548 49156588 ALR/Alpha 1000 . chr4 49274921 49275557 TAR1 1000 . chr4 49279413 49281307 ACRO1 1000 . chr4 49285459 49287329 ACRO1 1000 . chr4 49291495 49293492 ACRO1 1000 . chr4 49297647 49299647 ACRO1 1000 . chr4 49303783 49305927 ACRO1 1000 . chr4 49309748 49311601 ACRO1 1000 . chr4 49315744 49317782 ACRO1 1000 . chr4 49321910 49324803 ACRO1 1000 . chr4 49328955 49330849 ACRO1 1000 . chr4 49334703 49335339 TAR1 1000 . chr4 49513567 49515857 ACRO1 1000 . chr4 49519717 49520353 TAR1 1000 . chr4 49631297 49658098 (GAATG)n 1000 . chr4 51793952 51817236 ALR/Alpha 1000 . chr4 51819920 51822724 ALR/Alpha 1000 . chr4 53947966 53948121 ALR/Alpha 1000 . chr4 57262765 57262819 (CATTC)n 1000 . chr4 58854472 58854644 ALR/Alpha 1000 . chr4 63328016 63333526 ALR/Alpha 1000 . chr4 63339739 63344961 ALR/Alpha 1000 . chr4 63346050 63348616 ALR/Alpha 1000 . chr4 67398500 67401088 ALR/Alpha 1000 . chr4 69430863 69431035 LSU-rRNA_Hsa 1000 . chr4 70391322 70391392 (GAATG)n 1000 . chr4 75886022 75886544 LSU-rRNA_Hsa 1000 . chr4 76515867 76516022 LSU-rRNA_Hsa 1000 . chr4 77208404 77208735 LSU-rRNA_Hsa 1000 . chr4 77212297 77212397 LSU-rRNA_Hsa 1000 . chr4 77489448 77489556 ALR/Alpha 1000 . chr4 78008521 78008761 chrM 1000 . chr4 79875805 79875885 SSU-rRNA_Hsa 1000 . chr4 86047088 86047243 LSU-rRNA_Hsa 1000 . chr4 92701827 92702530 chrM 1000 . chr4 103361623 103361937 TAR1 1000 . chr4 107003225 107003747 LSU-rRNA_Hsa 1000 . chr4 111490800 111491006 ALR/Alpha 1000 . chr4 116299757 116299846 LSU-rRNA_Hsa 1000 . chr4 119237369 119237535 LSU-rRNA_Hsa 1000 . chr4 123541699 123541728 (CATTC)n 1000 . chr4 133161759 133161866 LSU-rRNA_Hsa 1000 . chr4 133788842 133789301 LSU-rRNA_Hsa 1000 . chr4 135576690 135576782 ALR/Alpha 1000 . chr4 141248933 141249070 LSU-rRNA_Hsa 1000 . chr4 149495864 149496032 SSU-rRNA_Hsa 1000 . chr4 149847917 149848149 LSU-rRNA_Hsa 1000 . chr4 153238602 153238767 SSU-rRNA_Hsa 1000 . chr4 154429183 154429247 LSU-rRNA_Hsa 1000 . chr4 155451643 155452775 chrM 1000 . chr4 155453597 155456074 chrM 1000 . chr4 155456588 155466467 chrM 1000 . chr4 161281763 161281845 SSU-rRNA_Hsa 1000 . chr4 162421366 162421541 chrM 1000 . chr4 166142572 166143511 LSU-rRNA_Hsa 1000 . chr4 185524652 185524679 (CATTC)n 1000 . chr4 190119763 190122447 TAR1 1000 . chr5 21477256 21497306 Low_mappability_island 1000 . chr5 34177777 34197469 Low_mappability_island 1000 . chr5 45908151 46405539 centromeric_repeat 1000 . chr5 50109807 50258740 centromeric_repeat 1000 . chr5 71850823 71851169 LSU-rRNA_Hsa 1000 . chr5 80649988 80652404 Low_mappability_island 1000 . chr5 94567363 94571021 Low_mappability_island 1000 . chr5 98410821 98410975 Low_mappability_island 1000 . chr5 100045852 100055169 Low_mappability_island 1000 . chr5 106553362 106553562 chrM 1000 . chr5 123760278 123761738 chrM 1000 . chr5 134923259 134928581 Low_mappability_island 1000 . chr5 175114631 175115174 SSU-rRNA_Hsa 1000 . chr5 11942 13334 TAR1 1000 . chr5 1403467 1403559 (CATTC)n 1000 . chr5 3352915 3353044 LSU-rRNA_Hsa 1000 . chr5 3637148 3639314 TAR1 1000 . chr5 10373929 10374976 SSU-rRNA_Hsa 1000 . chr5 10376523 10377035 SSU-rRNA_Hsa 1000 . chr5 12327443 12327769 TAR1 1000 . chr5 23885454 23892045 ALR/Alpha 1000 . chr5 23893480 23905597 ALR/Alpha 1000 . chr5 34038272 34038440 LSU-rRNA_Hsa 1000 . chr5 34861954 34862127 LSU-rRNA_Hsa 1000 . chr5 41357001 41357090 SSU-rRNA_Hsa 1000 . chr5 45908547 45914858 ALR/Alpha 1000 . chr5 45916360 45921771 ALR/Alpha 1000 . chr5 45927076 45931057 ALR/Alpha 1000 . chr5 45933401 45937616 ALR/Alpha 1000 . chr5 45939194 45939625 ALR/Alpha 1000 . chr5 45940356 45970582 ALR/Alpha 1000 . chr5 45971162 45972798 ALR/Alpha 1000 . chr5 45973934 45977380 ALR/Alpha 1000 . chr5 45978452 45979687 ALR/Alpha 1000 . chr5 45982394 46000056 ALR/Alpha 1000 . chr5 46009900 46030526 ALR/Alpha 1000 . chr5 46032600 46045438 ALR/Alpha 1000 . chr5 46047395 46096136 ALR/Alpha 1000 . chr5 46118412 46128951 ALR/Alpha 1000 . chr5 46136999 46151855 ALR/Alpha 1000 . chr5 46152434 46156301 ALR/Alpha 1000 . chr5 46160497 46171153 ALR/Alpha 1000 . chr5 46172551 46193424 ALR/Alpha 1000 . chr5 46199447 46270443 ALR/Alpha 1000 . chr5 46271360 46313456 ALR/Alpha 1000 . chr5 46318376 46341624 ALR/Alpha 1000 . chr5 46343088 46371372 ALR/Alpha 1000 . chr5 46377390 46385244 ALR/Alpha 1000 . chr5 46391241 46405536 ALR/Alpha 1000 . chr5 50109807 50145786 ALR/Alpha 1000 . chr5 50151883 50156144 ALR/Alpha 1000 . chr5 50161308 50162864 ALR/Alpha 1000 . chr5 50164115 50168790 ALR/Alpha 1000 . chr5 50174969 50221924 ALR/Alpha 1000 . chr5 50224288 50230094 ALR/Alpha 1000 . chr5 50233176 50254086 ALR/Alpha 1000 . chr5 50254822 50256951 ALR/Alpha 1000 . chr5 50263128 50263770 ALR/Alpha 1000 . chr5 52517845 52517924 LSU-rRNA_Hsa 1000 . chr5 53472859 53472915 LSU-rRNA_Hsa 1000 . chr5 58906800 58906827 (GAATG)n 1000 . chr5 63424526 63424817 TAR1 1000 . chr5 66129055 66129401 LSU-rRNA_Hsa 1000 . chr5 71850917 71851115 LSU-rRNA_Hsa 1000 . chr5 72359614 72359747 BSR/Beta 1000 . chr5 80650021 80652368 chrM 1000 . chr5 94567455 94570918 chrM 1000 . chr5 97389170 97389364 LSU-rRNA_Hsa 1000 . chr5 100045937 100055045 chrM 1000 . chr5 103726372 103726515 LSU-rRNA_Hsa 1000 . chr5 106553362 106553522 chrM 1000 . chr5 123654907 123655354 LSU-rRNA_Hsa 1000 . chr5 123760278 123761738 chrM 1000 . chr5 134923308 134928527 chrM 1000 . chr5 143309354 143309540 ALR/Alpha 1000 . chr5 146555982 146556104 LSU-rRNA_Hsa 1000 . chr5 150663439 150663504 (GAGTG)n 1000 . chr5 155408562 155408800 LSU-rRNA_Hsa 1000 . chr5 157199880 157200049 LSU-rRNA_Hsa 1000 . chr5 157981599 157981645 (CATTC)n 1000 . chr5 161040056 161040626 ALR/Alpha 1000 . chr5 161163073 161163186 ALR/Alpha 1000 . chr5 166367504 166367556 BSR/Beta 1000 . chr5 175114739 175115174 SSU-rRNA_Hsa 1000 . chr5 180181470 180181499 (GAGTG)n 1000 . chr6 58409071 58412753 centromeric_repeat 1000 . chr6 58419677 58453888 centromeric_repeat 1000 . chr6 61293703 61357029 centromeric_repeat 1000 . chr6 61479987 61496707 ALR/Alpha 1000 . chr6 61497904 61520739 ALR/Alpha 1000 . chr6 61574061 61574676 Low_mappability_island 1000 . chr6 133272806 133273063 LSU-rRNA_Hsa 1000 . chr6 136738004 136738188 SSU-rRNA_Hsa 1000 . chr6 150343938 150344145 SSU-rRNA_Hsa 1000 . chr6 157310278 157314493 Low_mappability_island 1000 . chr6 147986 149365 TAR1 1000 . chr6 4683918 4684038 (GAATG)n 1000 . chr6 5145879 5145905 (CATTC)n 1000 . chr6 15035087 15035160 LSU-rRNA_Hsa 1000 . chr6 16425257 16425320 LSU-rRNA_Hsa 1000 . chr6 22691087 22691226 LSU-rRNA_Hsa 1000 . chr6 22947964 22948121 LSU-rRNA_Hsa 1000 . chr6 23007782 23007871 LSU-rRNA_Hsa 1000 . chr6 23008839 23008918 LSU-rRNA_Hsa 1000 . chr6 26263635 26263767 SSU-rRNA_Hsa 1000 . chr6 26264371 26264453 SSU-rRNA_Hsa 1000 . chr6 28202033 28202095 LSU-rRNA_Hsa 1000 . chr6 29762139 29762686 LSU-rRNA_Hsa 1000 . chr6 31225279 31225318 SSU-rRNA_Hsa 1000 . chr6 31475377 31475560 LSU-rRNA_Hsa 1000 . chr6 34580081 34580213 ALR/Alpha 1000 . chr6 36564682 36564761 SSU-rRNA_Hsa 1000 . chr6 37386590 37386792 LSU-rRNA_Hsa 1000 . chr6 38911592 38911621 (GAATG)n 1000 . chr6 41542419 41542439 (GAGTG)n 1000 . chr6 41744028 41744081 (GAATG)n 1000 . chr6 46113970 46114066 TAR1 1000 . chr6 51012898 51013024 LSU-rRNA_Hsa 1000 . chr6 51373814 51373839 (GAGTG)n 1000 . chr6 54991242 54991369 ALR/Alpha 1000 . chr6 57377749 57378048 ALR/Alpha 1000 . chr6 58403957 58407963 ALR/Alpha 1000 . chr6 58409077 58412695 ALR/Alpha 1000 . chr6 58419708 58444698 ALR/Alpha 1000 . chr6 58446260 58453883 ALR/Alpha 1000 . chr6 61306112 61357029 ALR/Alpha 1000 . chr6 61294257 61305473 ALR/Alpha 1000 . chr6 61283638 61287259 ALR/Alpha 1000 . chr6 61278498 61282515 ALR/Alpha 1000 . chr6 61476976 61478994 ALR/Alpha 1000 . chr6 61479987 61496707 ALR/Alpha 1000 . chr6 61497904 61520739 ALR/Alpha 1000 . chr6 61574112 61574629 chrM 1000 . chr6 66944606 66944692 LSU-rRNA_Hsa 1000 . chr6 69473179 69473237 LSU-rRNA_Hsa 1000 . chr6 71168782 71168814 (GAATG)n 1000 . chr6 73306414 73306467 LSU-rRNA_Hsa 1000 . chr6 73475923 73476080 LSU-rRNA_Hsa 1000 . chr6 74168085 74168140 LSU-rRNA_Hsa 1000 . chr6 81550978 81551040 LSU-rRNA_Hsa 1000 . chr6 84283140 84283212 SSU-rRNA_Hsa 1000 . chr6 99210534 99210561 (GAATG)n 1000 . chr6 99581219 99581289 LSU-rRNA_Hsa 1000 . chr6 104162672 104162698 (CATTC)n 1000 . chr6 105324101 105324160 LSU-rRNA_Hsa 1000 . chr6 105519888 105519951 LSU-rRNA_Hsa 1000 . chr6 113933533 113933590 (CATTC)n 1000 . chr6 114151282 114151550 LSU-rRNA_Hsa 1000 . chr6 117224313 117224670 TAR1 1000 . chr6 120262295 120262401 LSU-rRNA_Hsa 1000 . chr6 120406547 120406888 TAR1 1000 . chr6 124172292 124172351 (GAATG)n 1000 . chr6 133272806 133273028 LSU-rRNA_Hsa 1000 . chr6 134674642 134674909 LSU-rRNA_Hsa 1000 . chr6 136738004 136738088 SSU-rRNA_Hsa 1000 . chr6 137013121 137013163 (CATTC)n 1000 . chr6 137037585 137037697 LSU-rRNA_Hsa 1000 . chr6 141451692 141451762 (GAATG)n 1000 . chr6 144370891 144371148 LSU-rRNA_Hsa 1000 . chr6 150344017 150344145 SSU-rRNA_Hsa 1000 . chr6 151836845 151837121 SSU-rRNA_Hsa 1000 . chr6 157472483 157472510 (GAGTG)n 1000 . chr6 168613596 168615772 TAR1 1000 . chr6 170610405 170610521 TAR1 1000 . chr7 43838756 43838931 TAR1 1000 . chr7 45251918 45252141 Low_mappability_island 1000 . chr7 56370115 56375284 Low_mappability_island 1000 . chr7 57186273 57186476 Low_mappability_island 1000 . chr7 57187603 57187737 Low_mappability_island 1000 . chr7 57194122 57194291 Low_mappability_island 1000 . chr7 57485020 57497207 Satellite_repeat 1000 . chr7 57751782 57777284 centromeric_repeat 1000 . chr7 57879478 57994625 centromeric_repeat 1000 . chr7 64598779 64605805 BSR/Beta 1000 . chr7 65486435 65491310 centromeric_repeat 1000 . chr7 68736481 68736686 Low_mappability_island 1000 . chr7 69062383 69062801 LSU-rRNA_Hsa 1000 . chr7 81333591 81333831 SSU-rRNA_Hsa 1000 . chr7 142665140 142667806 Low_mappability_island 1000 . chr7 145997310 145997468 Low_mappability_island 1000 . chr7 1519256 1519579 ALR/Alpha 1000 . chr7 2985542 2985632 LSU-rRNA_Hsa 1000 . chr7 27513759 27513883 LSU-rRNA_Hsa 1000 . chr7 33083611 33083715 LSU-rRNA_Hsa 1000 . chr7 36566398 36566495 LSU-rRNA_Hsa 1000 . chr7 39389979 39390007 (CATTC)n 1000 . chr7 43838756 43838931 TAR1 1000 . chr7 45168936 45168956 (CATTC)n 1000 . chr7 45251970 45252127 chrM 1000 . chr7 48463747 48463849 (GAATG)n 1000 . chr7 56611412 56618037 BSR/Beta 1000 . chr7 56658632 56660392 BSR/Beta 1000 . chr7 56661060 56669741 BSR/Beta 1000 . chr7 57137612 57142611 BSR/Beta 1000 . chr7 57485986 57497117 (GAATG)n 1000 . chr7 57751808 57760598 ALR/Alpha 1000 . chr7 57764906 57768779 ALR/Alpha 1000 . chr7 57879609 57942145 ALR/Alpha 1000 . chr7 57946409 57962301 ALR/Alpha 1000 . chr7 57966625 57994620 ALR/Alpha 1000 . chr7 61071609 61073162 HSATII 1000 . chr7 61096303 61103182 ALR/Alpha 1000 . chr7 61105028 61265630 ALR/Alpha 1000 . chr7 61268108 61307947 ALR/Alpha 1000 . chr7 61311395 61321414 ALR/Alpha 1000 . chr7 61324763 61327786 ALR/Alpha 1000 . chr7 62027204 62027737 ALR/Alpha 1000 . chr7 62029793 62040702 ALR/Alpha 1000 . chr7 62043173 62082996 ALR/Alpha 1000 . chr7 62086441 62096288 ALR/Alpha 1000 . chr7 62099632 62125086 ALR/Alpha 1000 . chr7 62125611 62126054 ALR/Alpha 1000 . chr7 62155655 62158647 ALR/Alpha 1000 . chr7 62125611 62151542 ALR/Alpha 1000 . chr7 62099633 62125086 ALR/Alpha 1000 . chr7 62086441 62096288 ALR/Alpha 1000 . chr7 62043173 62082983 ALR/Alpha 1000 . chr7 62029793 62040702 ALR/Alpha 1000 . chr7 62027204 62027737 ALR/Alpha 1000 . chr7 62295309 62315148 (GAATG)n 1000 . chr7 62335276 62358863 (GAATG)n 1000 . chr7 62506781 62549634 ALR/Alpha 1000 . chr7 62554040 62569689 ALR/Alpha 1000 . chr7 62570786 62587593 ALR/Alpha 1000 . chr7 62588937 62593961 ALR/Alpha 1000 . chr7 62595496 62599108 ALR/Alpha 1000 . chr7 62600705 62602436 ALR/Alpha 1000 . chr7 62606320 62607504 ALR/Alpha 1000 . chr7 62608526 62616700 ALR/Alpha 1000 . chr7 62617225 62619195 ALR/Alpha 1000 . chr7 62620211 62639291 ALR/Alpha 1000 . chr7 62642929 62666862 ALR/Alpha 1000 . chr7 62673029 62695669 ALR/Alpha 1000 . chr7 62697367 62721022 ALR/Alpha 1000 . chr7 62722012 62728599 ALR/Alpha 1000 . chr7 62729241 62736066 ALR/Alpha 1000 . chr7 62742922 62800150 ALR/Alpha 1000 . chr7 62800956 62858907 ALR/Alpha 1000 . chr7 62864926 62900390 ALR/Alpha 1000 . chr7 62905476 62908851 ALR/Alpha 1000 . chr7 62914989 62941674 ALR/Alpha 1000 . chr7 62942393 62949114 ALR/Alpha 1000 . chr7 62952565 62970701 ALR/Alpha 1000 . chr7 62972185 62976516 ALR/Alpha 1000 . chr7 62977502 62986269 ALR/Alpha 1000 . chr7 62987339 62992472 ALR/Alpha 1000 . chr7 64024577 64031879 BSR/Beta 1000 . chr7 64225819 64232958 BSR/Beta 1000 . chr7 64238817 64243822 BSR/Beta 1000 . chr7 64281651 64301593 BSR/Beta 1000 . chr7 64368210 64380853 BSR/Beta 1000 . chr7 64381918 64384357 BSR/Beta 1000 . chr7 64392192 64401723 ALR/Alpha 1000 . chr7 64598779 64605805 BSR/Beta 1000 . chr7 64606337 64618065 BSR/Beta 1000 . chr7 64626253 64629081 BSR/Beta 1000 . chr7 64630486 64644979 BSR/Beta 1000 . chr7 64648610 64652333 BSR/Beta 1000 . chr7 64652927 64659885 BSR/Beta 1000 . chr7 65486445 65490786 ALR/Alpha 1000 . chr7 68321754 68321803 LSU-rRNA_Hsa 1000 . chr7 69062383 69062801 LSU-rRNA_Hsa 1000 . chr7 74662928 74662981 LSU-rRNA_Hsa 1000 . chr7 78802462 78802569 LSU-rRNA_Hsa 1000 . chr7 81276023 81276093 LSU-rRNA_Hsa 1000 . chr7 81333591 81333831 SSU-rRNA_Hsa 1000 . chr7 92806753 92806789 LSU-rRNA_Hsa 1000 . chr7 95243191 95243275 LSU-rRNA_Hsa 1000 . chr7 99468236 99468584 LSU-rRNA_Hsa 1000 . chr7 102325078 102325190 LSU-rRNA_Hsa 1000 . chr7 104990097 104990313 LSU-rRNA_Hsa 1000 . chr7 105001335 105001419 LSU-rRNA_Hsa 1000 . chr7 105325850 105326085 LSU-rRNA_Hsa 1000 . chr7 112133927 112133967 (GAATG)n 1000 . chr7 128478033 128478125 LSU-rRNA_Hsa 1000 . chr7 132132563 132132600 (CATTC)n 1000 . chr7 134394147 134394217 (CATTC)n 1000 . chr7 134396612 134396667 (CATTC)n 1000 . chr7 136177445 136177552 LSU-rRNA_Hsa 1000 . chr7 137868475 137868518 (CATTC)n 1000 . chr7 141801407 141805475 chrM 1000 . chr7 142665200 142667693 chrM 1000 . chr7 143454020 143454133 LSU-rRNA_Hsa 1000 . chr7 158105953 158106110 (CATTC)n 1000 . chr7 158523652 158524569 (GAGTG)n 1000 . chr7 159335247 159335741 TAR1 1000 . chr8 205512 207639 TAR1 1000 . chr8 21598460 21598795 LSU-rRNA_Hsa 1000 . chr8 33011448 33015761 Low_mappability_island 1000 . chr8 43237594 43242430 Satellite_repeat 1000 . chr8 43544343 43983744 centromeric_repeat 1000 . chr8 45927265 46545919 centromeric_repeat 1000 . chr8 46827421 46831175 Low_mappability_island 1000 . chr8 46839222 46864479 BSR/Beta 1000 . chr8 55842396 55842859 LSU-rRNA_Hsa 1000 . chr8 68306166 68306687 LSU-rRNA_Hsa 1000 . chr8 69690013 69690385 LSU-rRNA_Hsa 1000 . chr8 76201919 76202154 Low_mappability_island 1000 . chr8 99495782 99496059 Low_mappability_island 1000 . chr8 205512 207639 TAR1 1000 . chr8 229377 229693 TAR1 1000 . chr8 6855838 6855869 (GAATG)n 1000 . chr8 16168926 16168976 (CATTC)n 1000 . chr8 17717155 17717333 SSU-rRNA_Hsa 1000 . chr8 19854543 19855019 LSU-rRNA_Hsa 1000 . chr8 20077129 20077231 LSU-rRNA_Hsa 1000 . chr8 21598460 21598795 LSU-rRNA_Hsa 1000 . chr8 29503329 29503366 LSU-rRNA_Hsa 1000 . chr8 33013359 33013533 LSU-rRNA_Hsa 1000 . chr8 43572236 43625300 ALR/Alpha 1000 . chr8 43626543 43646804 ALR/Alpha 1000 . chr8 43649370 43672737 ALR/Alpha 1000 . chr8 43674594 43677755 ALR/Alpha 1000 . chr8 43678563 43686645 ALR/Alpha 1000 . chr8 43688723 43694014 ALR/Alpha 1000 . chr8 43702587 43704739 ALR/Alpha 1000 . chr8 43709026 43720460 ALR/Alpha 1000 . chr8 43721029 43725261 ALR/Alpha 1000 . chr8 43726307 43739538 ALR/Alpha 1000 . chr8 43740506 43747674 ALR/Alpha 1000 . chr8 43749013 43864897 ALR/Alpha 1000 . chr8 43869363 43882489 ALR/Alpha 1000 . chr8 43886793 43892560 ALR/Alpha 1000 . chr8 43899405 43901572 ALR/Alpha 1000 . chr8 43904532 43911919 ALR/Alpha 1000 . chr8 43912802 43922406 ALR/Alpha 1000 . chr8 43923622 43936564 ALR/Alpha 1000 . chr8 43937297 43958703 ALR/Alpha 1000 . chr8 43961020 43983735 ALR/Alpha 1000 . chr8 45927268 45965931 ALR/Alpha 1000 . chr8 45968251 45979997 ALR/Alpha 1000 . chr8 45986147 46000104 ALR/Alpha 1000 . chr8 46002247 46010560 ALR/Alpha 1000 . chr8 46039948 46040560 LSU-rRNA_Hsa 1000 . chr8 46044657 46088787 ALR/Alpha 1000 . chr8 46090052 46090997 ALR/Alpha 1000 . chr8 46095545 46097386 ALR/Alpha 1000 . chr8 46153057 46173150 ALR/Alpha 1000 . chr8 46287824 46310390 ALR/Alpha 1000 . chr8 46312310 46325820 ALR/Alpha 1000 . chr8 46344131 46348623 ALR/Alpha 1000 . chr8 46351533 46373298 ALR/Alpha 1000 . chr8 46391801 46401104 ALR/Alpha 1000 . chr8 46449146 46455507 ALR/Alpha 1000 . chr8 46456524 46483522 ALR/Alpha 1000 . chr8 46491369 46515358 ALR/Alpha 1000 . chr8 46516589 46533684 ALR/Alpha 1000 . chr8 46534254 46544722 ALR/Alpha 1000 . chr8 46634360 46647593 BSR/Beta 1000 . chr8 46648412 46651484 BSR/Beta 1000 . chr8 46777735 46781681 BSR/Beta 1000 . chr8 46813912 46831050 BSR/Beta 1000 . chr8 46839222 46864479 BSR/Beta 1000 . chr8 46874403 46876533 BSR/Beta 1000 . chr8 46881278 46893368 BSR/Beta 1000 . chr8 47002978 47003809 BSR/Beta 1000 . chr8 48084117 48084819 ACRO1 1000 . chr8 48463396 48463473 LSU-rRNA_Hsa 1000 . chr8 50109691 50109774 TAR1 1000 . chr8 54974721 54974763 SSU-rRNA_Hsa 1000 . chr8 55842473 55842782 LSU-rRNA_Hsa 1000 . chr8 55909094 55909477 LSU-rRNA_Hsa 1000 . chr8 62454924 62455140 LSU-rRNA_Hsa 1000 . chr8 68306205 68306687 LSU-rRNA_Hsa 1000 . chr8 69690013 69690385 LSU-rRNA_Hsa 1000 . chr8 75549562 75549601 ALR/Alpha 1000 . chr8 76368125 76368233 LSU-rRNA_Hsa 1000 . chr8 80156845 80156916 (GAGTG)n 1000 . chr8 96172139 96172225 (GAATG)n 1000 . chr8 97565505 97565710 LSU-rRNA_Hsa 1000 . chr8 101537951 101538094 LSU-rRNA_Hsa 1000 . chr8 102479261 102479308 LSU-rRNA_Hsa 1000 . chr8 106298584 106298625 (GAATG)n 1000 . chr8 108292362 108292433 LSU-rRNA_Hsa 1000 . chr8 116615525 116615569 (GAATG)n 1000 . chr8 127164485 127164575 (GAATG)n 1000 . chr8 132864577 132864677 ALR/Alpha 1000 . chr8 134439523 134440170 (GAATG)n 1000 . chr8 135082533 135082570 (CATTC)n 1000 . chr8 135551256 135551291 (CATTC)n 1000 . chr8 139678155 139678267 LSU-rRNA_Hsa 1000 . chr9 10435 11574 TAR1 1000 . chr9 4799734 4800000 SSU-rRNA_Hsa 1000 . chr9 33656608 33659251 Low_mappability_island 1000 . chr9 65169711 65183254 centromeric_repeat 1000 . chr9 42900247 42900501 Low_mappability_island 1000 . chr9 61665285 61694469 centromeric_repeat 1000 . chr9 41272931 41274621 telomeric_repeat 1000 . chr9 62838346 62838981 TAR1 1000 . chr9 40814682 40910315 centromeric_repeat 1000 . chr9 63065942 63100622 centromeric_repeat 1000 . chr9 63360150 63366064 centromeric_repeat 1000 . chr9 61855375 61858380 centromeric_repeat 1000 . chr9 63815041 63839381 Low_mappability_island 1000 . chr9 64664655 64675580 centromeric_repeat 1000 . chr9 64677352 64699079 centromeric_repeat 1000 . chr9 64935543 64998124 centromeric_repeat 1000 . chr9 65182538 65183249 centromeric_repeat 1000 . chr9 70038157 70038656 Satellite_repeat 1000 . chr9 76175161 76175339 (GAATG)n 1000 . chr9 76571658 76572110 LSU-rRNA_Hsa 1000 . chr9 138125486 138127331 TAR1 1000 . chr9 10435 11574 TAR1 1000 . chr9 1212195 1212358 SSU-rRNA_Hsa 1000 . chr9 1515397 1515501 TAR1 1000 . chr9 4691651 4691745 LSU-rRNA_Hsa 1000 . chr9 4799734 4800000 SSU-rRNA_Hsa 1000 . chr9 7622268 7622335 LSU-rRNA_Hsa 1000 . chr9 17001119 17001243 LSU-rRNA_Hsa 1000 . chr9 19278554 19278595 LSU-rRNA_Hsa 1000 . chr9 19492827 19492990 LSU-rRNA_Hsa 1000 . chr9 20846587 20846763 LSU-rRNA_Hsa 1000 . chr9 26081083 26081196 LSU-rRNA_Hsa 1000 . chr9 28260564 28260628 LSU-rRNA_Hsa 1000 . chr9 32537940 32538169 SSU-rRNA_Hsa 1000 . chr9 33219986 33220033 LSU-rRNA_Hsa 1000 . chr9 33655902 33655953 chrM 1000 . chr9 33656634 33659130 chrM 1000 . chr9 40108512 40109004 TAR1 1000 . chr9 65182537 65183240 ALR/Alpha 1000 . chr9 65169970 65180660 ALR/Alpha 1000 . chr9 61675534 61679434 ALR/Alpha 1000 . chr9 61683721 61691940 ALR/Alpha 1000 . chr9 61692446 61694192 ALR/Alpha 1000 . chr9 41273992 41274606 TAR1 1000 . chr9 40108512 40109004 TAR1 1000 . chr9 62443549 62443924 TAR1 1000 . chr9 62465147 62465611 TAR1 1000 . chr9 62838346 62838981 TAR1 1000 . chr9 40814850 40873597 ALR/Alpha 1000 . chr9 40879920 40883514 ALR/Alpha 1000 . chr9 40886571 40905020 ALR/Alpha 1000 . chr9 63052792 63053282 TAR1 1000 . chr9 63065983 63087608 ALR/Alpha 1000 . chr9 63089484 63100173 ALR/Alpha 1000 . chr9 63360270 63366003 ALR/Alpha 1000 . chr9 63385108 63385689 TAR1 1000 . chr9 63705740 63706232 TAR1 1000 . chr9 63781107 63781732 TAR1 1000 . chr9 64664778 64675467 ALR/Alpha 1000 . chr9 64677346 64698968 ALR/Alpha 1000 . chr9 64711668 64712198 TAR1 1000 . chr9 64935667 64998120 ALR/Alpha 1000 . chr9 65169970 65180660 ALR/Alpha 1000 . chr9 65182537 65183240 ALR/Alpha 1000 . chr9 65196444 65196513 TAR1 1000 . chr9 65838457 65839157 ALR/Alpha 1000 . chr9 65825188 65825257 TAR1 1000 . chr9 41356507 41356999 TAR1 1000 . chr9 70038165 70038638 (GAATG)n 1000 . chr9 76175196 76175339 (GAATG)n 1000 . chr9 76571732 76572034 LSU-rRNA_Hsa 1000 . chr9 77231028 77231090 TAR1 1000 . chr9 81421720 81421806 SSU-rRNA_Hsa 1000 . chr9 89471579 89471946 TAR1 1000 . chr9 103290130 103290450 LSU-rRNA_Hsa 1000 . chr9 104283594 104283669 LSU-rRNA_Hsa 1000 . chr9 107507651 107508680 BSR/Beta 1000 . chr9 110572900 110572927 (CATTC)n 1000 . chr9 111061713 111061872 LSU-rRNA_Hsa 1000 . chr9 116362014 116362054 (GAATG)n 1000 . chr9 116943773 116943838 (CATTC)n 1000 . chr9 124051458 124051534 LSU-rRNA_Hsa 1000 . chr9 128668886 128668948 LSU-rRNA_Hsa 1000 . chr9 135385052 135385228 (GAATG)n 1000 . chr9 135470476 135470535 LSU-rRNA_Hsa 1000 . chr9 135581909 135581995 (GAGTG)n 1000 . chr9 137792882 137793070 LSU-rRNA_Hsa 1000 . chr9 138125486 138127331 TAR1 1000 . chrX 55179678 55180307 Low_mappability_island 1000 . chrX 55181320 55181719 Low_mappability_island 1000 . chrX 55181867 55182210 Low_mappability_island 1000 . chrX 55182547 55182775 Low_mappability_island 1000 . chrX 55183222 55183573 Low_mappability_island 1000 . chrX 58304055 58304410 centromeric_repeat 1000 . chrX 58347373 58347529 centromeric_repeat 1000 . chrX 58351247 58351431 centromeric_repeat 1000 . chrX 58388917 58389954 centromeric_repeat 1000 . chrX 58405978 58406247 centromeric_repeat 1000 . chrX 58459454 58459808 centromeric_repeat 1000 . chrX 58462465 58468095 centromeric_repeat 1000 . chrX 58473033 58477802 centromeric_repeat 1000 . chrX 58479643 58501781 centromeric_repeat 1000 . chrX 58501751 58510450 centromeric_repeat 1000 . chrX 58517628 58555579 centromeric_repeat 1000 . chrX 62462542 62700213 centromeric_repeat 1000 . chrX 62783735 62822110 centromeric_repeat 1000 . chrX 84403921 84404011 Low_mappability_island 1000 . chrX 109054118 109054656 LSU-rRNA_Hsa 1000 . chrX 115842724 115890104 Low_mappability_island 1000 . chrX 126471640 126473368 Low_mappability_island 1000 . chrX 126581002 126581355 Low_mappability_island 1000 . chrX 126730861 126730997 Low_mappability_island 1000 . chrX 126731736 126731891 Low_mappability_island 1000 . chrX 402735 402878 ALR/Alpha 1000 . chrX 13573877 13573935 LSU-rRNA_Hsa 1000 . chrX 13575638 13575838 LSU-rRNA_Hsa 1000 . chrX 16334242 16334780 SSU-rRNA_Hsa 1000 . chrX 20101281 20101538 ALR/Alpha 1000 . chrX 21080210 21080300 (GAATG)n 1000 . chrX 24030154 24030185 (GAATG)n 1000 . chrX 29076610 29076635 (CATTC)n 1000 . chrX 30891068 30891224 LSU-rRNA_Hsa 1000 . chrX 31342008 31342033 (CATTC)n 1000 . chrX 32593471 32593617 SSU-rRNA_Hsa 1000 . chrX 32609535 32609568 (GAATG)n 1000 . chrX 34215957 34216047 SSU-rRNA_Hsa 1000 . chrX 35512013 35512137 LSU-rRNA_Hsa 1000 . chrX 36686820 36687026 (CATTC)n 1000 . chrX 47316112 47316178 LSU-rRNA_Hsa 1000 . chrX 47890039 47890403 LSU-rRNA_Hsa 1000 . chrX 51404988 51405186 (CATTC)n 1000 . chrX 54377187 54377257 LSU-rRNA_Hsa 1000 . chrX 55178252 55184027 chrM 1000 . chrX 58061518 58063661 ALR/Alpha 1000 . chrX 58064468 58065320 ALR/Alpha 1000 . chrX 58066304 58078651 ALR/Alpha 1000 . chrX 58094350 58097496 ALR/Alpha 1000 . chrX 58145849 58150347 ALR/Alpha 1000 . chrX 58154167 58159469 ALR/Alpha 1000 . chrX 58161561 58185671 ALR/Alpha 1000 . chrX 58216682 58218879 ALR/Alpha 1000 . chrX 58219979 58222653 ALR/Alpha 1000 . chrX 58292751 58325311 ALR/Alpha 1000 . chrX 58327587 58396760 ALR/Alpha 1000 . chrX 58401879 58444868 ALR/Alpha 1000 . chrX 58445766 58453299 ALR/Alpha 1000 . chrX 58456354 58468086 ALR/Alpha 1000 . chrX 58469299 58477804 ALR/Alpha 1000 . chrX 58479637 58510362 ALR/Alpha 1000 . chrX 58517662 58555578 ALR/Alpha 1000 . chrX 62462544 62517103 ALR/Alpha 1000 . chrX 62523129 62555436 ALR/Alpha 1000 . chrX 62562467 62570271 ALR/Alpha 1000 . chrX 62571943 62642155 ALR/Alpha 1000 . chrX 62643294 62657475 ALR/Alpha 1000 . chrX 62661104 62707626 ALR/Alpha 1000 . chrX 62717099 62740077 ALR/Alpha 1000 . chrX 62748375 62753634 ALR/Alpha 1000 . chrX 62759725 62779124 ALR/Alpha 1000 . chrX 62780627 62781230 ALR/Alpha 1000 . chrX 62783735 62821723 ALR/Alpha 1000 . chrX 62825758 62826373 ALR/Alpha 1000 . chrX 66235876 66235901 (GAATG)n 1000 . chrX 74550152 74550414 TAR1 1000 . chrX 84710402 84710757 TAR1 1000 . chrX 88828252 88828340 LSU-rRNA_Hsa 1000 . chrX 89480758 89480944 LSU-rRNA_Hsa 1000 . chrX 94204340 94204490 TAR1 1000 . chrX 94388707 94388986 TAR1 1000 . chrX 97517867 97518263 LSU-rRNA_Hsa 1000 . chrX 98574457 98574625 TAR1 1000 . chrX 98581753 98582047 TAR1 1000 . chrX 109054118 109054600 LSU-rRNA_Hsa 1000 . chrX 116389961 116390106 LSU-rRNA_Hsa 1000 . chrX 118199948 118200227 SSU-rRNA_Hsa 1000 . chrX 126471703 126473284 chrM 1000 . chrX 131090057 131090339 (GAGTG)n 1000 . chrX 134526280 134526420 LSU-rRNA_Hsa 1000 . chrX 134974806 134974861 LSU-rRNA_Hsa 1000 . chrX 140776227 140776442 LSU-rRNA_Hsa 1000 . chrX 156028596 156030114 TAR1 1000 . chrY 402735 402878 ALR/Alpha 1000 . chrY 3136948 3137134 LSU-rRNA_Hsa 1000 . chrY 4344766 4344869 Low_mappability_island 1000 . chrY 7803776 7826887 BSR/Beta 1000 . chrY 7858023 7862188 BSR/Beta 1000 . chrY 7862693 7863557 BSR/Beta 1000 . chrY 7867770 7884846 BSR/Beta 1000 . chrY 7917026 7938270 BSR/Beta 1000 . chrY 7938815 7946663 BSR/Beta 1000 . chrY 7947189 7952437 BSR/Beta 1000 . chrY 7961896 7963991 BSR/Beta 1000 . chrY 7964703 7980654 BSR/Beta 1000 . chrY 8002302 8005541 BSR/Beta 1000 . chrY 8006074 8006543 BSR/Beta 1000 . chrY 8007368 8017216 BSR/Beta 1000 . chrY 8018504 8026550 BSR/Beta 1000 . chrY 8030886 8048771 BSR/Beta 1000 . chrY 8050749 8053311 BSR/Beta 1000 . chrY 8058303 8068664 BSR/Beta 1000 . chrY 8073089 8079397 BSR/Beta 1000 . chrY 8080749 8096407 BSR/Beta 1000 . chrY 8310969 8313102 BSR/Beta 1000 . chrY 8313716 8345289 BSR/Beta 1000 . chrY 8346588 8347596 BSR/Beta 1000 . chrY 8352380 8362020 BSR/Beta 1000 . chrY 8362645 8363505 BSR/Beta 1000 . chrY 8372731 8397875 BSR/Beta 1000 . chrY 8423494 8424901 BSR/Beta 1000 . chrY 8425961 8427134 BSR/Beta 1000 . chrY 8428903 8453334 BSR/Beta 1000 . chrY 8457772 8457888 BSR/Beta 1000 . chrY 8458637 8465425 BSR/Beta 1000 . chrY 8465986 8474346 BSR/Beta 1000 . chrY 8488503 8501305 BSR/Beta 1000 . chrY 9041519 9041884 TAR1 1000 . chrY 9141869 9141976 Low_mappability_island 1000 . chrY 9235172 9235384 TAR1 1000 . chrY 10070821 10087999 centromeric_repeat 1000 . chrY 10144343 10144517 BSR/Beta 1000 . chrY 10197255 10199103 SSU-rRNA_Hsa 1000 . chrY 10203018 10208048 ALR/Alpha 1000 . chrY 10210164 10214924 ALR/Alpha 1000 . chrY 10216086 10220113 ALR/Alpha 1000 . chrY 10221785 10236085 ALR/Alpha 1000 . chrY 10237473 10238172 ALR/Alpha 1000 . chrY 10243127 10266930 ALR/Alpha 1000 . chrY 10594039 10633440 centromeric_repeat 1000 . chrY 11038290 11040859 Low_mappability_island 1000 . chrY 11096517 11103808 centromeric_repeat 1000 . chrY 11134501 11134991 chrM 1000 . chrY 11290281 11334915 Satellite_repeat 1000 . chrY 11486510 11592902 Satellite_repeat 1000 . chrY 11677872 11750278 Satellite_repeat 1000 . chrY 17580033 17580644 LSU-rRNA_Hsa 1000 . chrY 17652183 17664318 ALR/Alpha 1000 . chrY 17668720 17669824 ALR/Alpha 1000 . chrY 17671789 17684516 ALR/Alpha 1000 . chrY 17688188 17689539 ALR/Alpha 1000 . chrY 17696205 17705220 ALR/Alpha 1000 . chrY 17832418 17832701 TAR1 1000 . chrY 18073309 18073592 TAR1 1000 . chrY 18200793 18209808 ALR/Alpha 1000 . chrY 18216474 18217825 ALR/Alpha 1000 . chrY 18221497 18234224 ALR/Alpha 1000 . chrY 18236189 18237293 ALR/Alpha 1000 . chrY 18241695 18253827 ALR/Alpha 1000 . chrY 18325362 18325973 LSU-rRNA_Hsa 1000 . chrY 20962902 20963691 BSR/Beta 1000 . chrY 20987141 20989319 BSR/Beta 1000 . chrY 20996083 20996359 BSR/Beta 1000 . chrY 20997115 21005851 BSR/Beta 1000 . chrY 21017000 21019884 BSR/Beta 1000 . chrY 21058854 21061739 BSR/Beta 1000 . chrY 21072239 21073936 BSR/Beta 1000 . chrY 21075012 21086194 BSR/Beta 1000 . chrY 21086843 21086965 BSR/Beta 1000 . chrY 21737409 21737502 TAR1 1000 . chrY 21810302 21810481 TAR1 1000 . chrY 22101512 22101553 TAR1 1000 . chrY 22484852 22484893 TAR1 1000 . chrY 22807012 22829510 BSR/Beta 1000 . chrY 22834850 22845088 BSR/Beta 1000 . chrY 22876606 22893038 BSR/Beta 1000 . chrY 22894006 22896274 BSR/Beta 1000 . chrY 22902185 22913111 BSR/Beta 1000 . chrY 22914088 22918651 BSR/Beta 1000 . chrY 22952992 22975735 BSR/Beta 1000 . chrY 22976272 23014653 BSR/Beta 1000 . chrY 23036257 23046225 BSR/Beta 1000 . chrY 23071575 23073262 BSR/Beta 1000 . chrY 23347441 23349128 BSR/Beta 1000 . chrY 24002168 24002303 TAR1 1000 . chrY 24440758 24463258 BSR/Beta 1000 . chrY 24468598 24478836 BSR/Beta 1000 . chrY 24510355 24526787 BSR/Beta 1000 . chrY 24527755 24530023 BSR/Beta 1000 . chrY 24535934 24546860 BSR/Beta 1000 . chrY 24547837 24552400 BSR/Beta 1000 . chrY 24586736 24609476 BSR/Beta 1000 . chrY 24610013 24648391 BSR/Beta 1000 . chrY 24670001 24679969 BSR/Beta 1000 . chrY 24705319 24707006 BSR/Beta 1000 . chrY 24963100 24964787 BSR/Beta 1000 . chrY 24990134 25000102 BSR/Beta 1000 . chrY 25021712 25060094 BSR/Beta 1000 . chrY 25060631 25083355 BSR/Beta 1000 . chrY 25117701 25122264 BSR/Beta 1000 . chrY 25123241 25134168 BSR/Beta 1000 . chrY 25140079 25142347 BSR/Beta 1000 . chrY 25143315 25159748 BSR/Beta 1000 . chrY 25191268 25201509 BSR/Beta 1000 . chrY 25206849 25229350 BSR/Beta 1000 . chrY 25667837 25667972 TAR1 1000 . chrY 26408879 26409206 TAR1 1000 . chrY 26637982 26673214 Satellite_repeat 1000 . chrY 56673222 56771503 (CATTC)n 1000 . chrY 56825766 56851635 (CATTC)n 1000 . chrY 57215116 57216634 TAR1 1000 . chrY 402735 402878 ALR/Alpha 1000 . chrY 3136948 3137134 LSU-rRNA_Hsa 1000 . chrY 7803776 7826887 BSR/Beta 1000 . chrY 7858023 7862188 BSR/Beta 1000 . chrY 7862693 7863557 BSR/Beta 1000 . chrY 7867770 7884846 BSR/Beta 1000 . chrY 7917026 7938270 BSR/Beta 1000 . chrY 7938815 7946663 BSR/Beta 1000 . chrY 7947189 7952437 BSR/Beta 1000 . chrY 7961896 7963991 BSR/Beta 1000 . chrY 7964703 7980654 BSR/Beta 1000 . chrY 8002302 8005541 BSR/Beta 1000 . chrY 8006074 8006543 BSR/Beta 1000 . chrY 8007368 8017216 BSR/Beta 1000 . chrY 8018504 8026550 BSR/Beta 1000 . chrY 8030886 8048771 BSR/Beta 1000 . chrY 8050749 8053311 BSR/Beta 1000 . chrY 8058303 8068664 BSR/Beta 1000 . chrY 8073089 8079397 BSR/Beta 1000 . chrY 8080749 8096407 BSR/Beta 1000 . chrY 8310969 8313102 BSR/Beta 1000 . chrY 8313716 8345289 BSR/Beta 1000 . chrY 8346588 8347596 BSR/Beta 1000 . chrY 8352380 8362020 BSR/Beta 1000 . chrY 8362645 8363505 BSR/Beta 1000 . chrY 8372731 8397875 BSR/Beta 1000 . chrY 8423494 8424901 BSR/Beta 1000 . chrY 8425961 8427134 BSR/Beta 1000 . chrY 8428903 8453334 BSR/Beta 1000 . chrY 8457772 8457888 BSR/Beta 1000 . chrY 8458637 8465425 BSR/Beta 1000 . chrY 8465986 8474346 BSR/Beta 1000 . chrY 8488503 8501305 BSR/Beta 1000 . chrY 9041519 9041884 TAR1 1000 . chrY 9235172 9235384 TAR1 1000 . chrY 10070825 10087819 ALR/Alpha 1000 . chrY 10144343 10144517 BSR/Beta 1000 . chrY 10197255 10199103 SSU-rRNA_Hsa 1000 . chrY 10203018 10208048 ALR/Alpha 1000 . chrY 10210164 10214924 ALR/Alpha 1000 . chrY 10216086 10220113 ALR/Alpha 1000 . chrY 10221785 10236085 ALR/Alpha 1000 . chrY 10237473 10238172 ALR/Alpha 1000 . chrY 10243127 10266930 ALR/Alpha 1000 . chrY 10594042 10633432 ALR/Alpha 1000 . chrY 11038308 11040855 (CATTC)n 1000 . chrY 11103154 11103723 TAR1 1000 . chrY 11134501 11134991 chrM 1000 . chrY 11290848 11295909 (CATTC)n 1000 . chrY 11296656 11306122 (CATTC)n 1000 . chrY 11308882 11314125 BSR/Beta 1000 . chrY 11316888 11320772 BSR/Beta 1000 . chrY 11323527 11331547 BSR/Beta 1000 . chrY 11334308 11334434 BSR/Beta 1000 . chrY 11486602 11592900 HSATII 1000 . chrY 11677882 11749523 (GAATG)n 1000 . chrY 17580033 17580644 LSU-rRNA_Hsa 1000 . chrY 17652183 17664318 ALR/Alpha 1000 . chrY 17668720 17669824 ALR/Alpha 1000 . chrY 17671789 17684516 ALR/Alpha 1000 . chrY 17688188 17689539 ALR/Alpha 1000 . chrY 17696205 17705220 ALR/Alpha 1000 . chrY 17832418 17832701 TAR1 1000 . chrY 18073309 18073592 TAR1 1000 . chrY 18200793 18209808 ALR/Alpha 1000 . chrY 18216474 18217825 ALR/Alpha 1000 . chrY 18221497 18234224 ALR/Alpha 1000 . chrY 18236189 18237293 ALR/Alpha 1000 . chrY 18241695 18253827 ALR/Alpha 1000 . chrY 18325362 18325973 LSU-rRNA_Hsa 1000 . chrY 20962902 20963691 BSR/Beta 1000 . chrY 20987141 20989319 BSR/Beta 1000 . chrY 20996083 20996359 BSR/Beta 1000 . chrY 20997115 21005851 BSR/Beta 1000 . chrY 21017000 21019884 BSR/Beta 1000 . chrY 21058854 21061739 BSR/Beta 1000 . chrY 21072239 21073936 BSR/Beta 1000 . chrY 21075012 21086194 BSR/Beta 1000 . chrY 21086843 21086965 BSR/Beta 1000 . chrY 21737409 21737502 TAR1 1000 . chrY 21810302 21810481 TAR1 1000 . chrY 22101512 22101553 TAR1 1000 . chrY 22484852 22484893 TAR1 1000 . chrY 22807012 22829510 BSR/Beta 1000 . chrY 22834850 22845088 BSR/Beta 1000 . chrY 22876606 22893038 BSR/Beta 1000 . chrY 22894006 22896274 BSR/Beta 1000 . chrY 22902185 22913111 BSR/Beta 1000 . chrY 22914088 22918651 BSR/Beta 1000 . chrY 22952992 22975735 BSR/Beta 1000 . chrY 22976272 23014653 BSR/Beta 1000 . chrY 23036257 23046225 BSR/Beta 1000 . chrY 23071575 23073262 BSR/Beta 1000 . chrY 23347441 23349128 BSR/Beta 1000 . chrY 24002168 24002303 TAR1 1000 . chrY 24440758 24463258 BSR/Beta 1000 . chrY 24468598 24478836 BSR/Beta 1000 . chrY 24510355 24526787 BSR/Beta 1000 . chrY 24527755 24530023 BSR/Beta 1000 . chrY 24535934 24546860 BSR/Beta 1000 . chrY 24547837 24552400 BSR/Beta 1000 . chrY 24586736 24609476 BSR/Beta 1000 . chrY 24610013 24648391 BSR/Beta 1000 . chrY 24670001 24679969 BSR/Beta 1000 . chrY 24705319 24707006 BSR/Beta 1000 . chrY 24963100 24964787 BSR/Beta 1000 . chrY 24990134 25000102 BSR/Beta 1000 . chrY 25021712 25060094 BSR/Beta 1000 . chrY 25060631 25083355 BSR/Beta 1000 . chrY 25117701 25122264 BSR/Beta 1000 . chrY 25123241 25134168 BSR/Beta 1000 . chrY 25140079 25142347 BSR/Beta 1000 . chrY 25143315 25159748 BSR/Beta 1000 . chrY 25191268 25201509 BSR/Beta 1000 . chrY 25206849 25229350 BSR/Beta 1000 . chrY 25667837 25667972 TAR1 1000 . chrY 26408879 26409206 TAR1 1000 . chrY 26637984 26673198 (GAATG)n 1000 . chrY 56673222 56771503 (CATTC)n 1000 . chrY 56825766 56851635 (CATTC)n 1000 . chrY 57215116 57216634 TAR1 1000 .