{ "cells": [ { "cell_type": "code", "execution_count": 1, "metadata": {}, "outputs": [], "source": [ "import pandas as pd" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "download dataset via Open Science Framework" ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, "outputs": [], "source": [ "df = pd.read_csv(\n", " 'https://osf.io/vcfa9/download',\n", " compression='xz',\n", ")" ] }, { "cell_type": "code", "execution_count": 3, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
\n", " | Series | \n", "Mean Inter-Strain Fitness Differential | \n", "Fraction Inter-Strain Competitions Won | \n", "Inter-Strain Competition Null p-value | \n", "Flagged Advantageous Sites | \n", "Flagged Deleterious Sites | \n", "H_0 Advantageous Site Flags | \n", "H_0 Deleterious Site Flags | \n", "Estimated True Advantageous Sites | \n", "Estimated True Deleterious Sites | \n", "... | \n", "Resource Receiving Cardinal Fraction | \n", "Resource Receiving Cell Fraction | \n", "Resource Reserve Request Cardinal Fraction | \n", "Resource Reserve Request Cell Fraction | \n", "Resource Send Request Cardinal Fraction | \n", "Resource Send Request Cell Fraction | \n", "Spawn Arrest Cardinal Fraction | \n", "Spawn Arrest Cell Fraction | \n", "Spawn Request Cardinal Fraction | \n", "Spawn Request Cell Fraction | \n", "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | \n", "11000 | \n", "-0.000025 | \n", "0.45 | \n", "0.823803 | \n", "11 | \n", "0 | \n", "0.51 | \n", "0.51 | \n", "10.49 | \n", "-0.51 | \n", "... | \n", "0.003760 | \n", "0.015040 | \n", "0.484576 | \n", "0.782075 | \n", "0.246931 | \n", "0.504604 | \n", "0.012201 | \n", "0.048189 | \n", "0.352594 | \n", "0.707489 | \n", "
1 | \n", "11001 | \n", "-0.000033 | \n", "0.50 | \n", "1.000000 | \n", "10 | \n", "2 | \n", "0.29 | \n", "0.29 | \n", "9.71 | \n", "1.71 | \n", "... | \n", "0.003528 | \n", "0.014113 | \n", "0.013525 | \n", "0.052926 | \n", "0.013893 | \n", "0.054690 | \n", "0.013672 | \n", "0.054102 | \n", "0.295354 | \n", "0.683916 | \n", "
2 | \n", "11002 | \n", "-0.000204 | \n", "0.30 | \n", "0.115318 | \n", "2 | \n", "0 | \n", "0.06 | \n", "0.06 | \n", "1.94 | \n", "-0.06 | \n", "... | \n", "0.002575 | \n", "0.010302 | \n", "0.013588 | \n", "0.053996 | \n", "0.012877 | \n", "0.051510 | \n", "0.010391 | \n", "0.041208 | \n", "0.326021 | \n", "0.716874 | \n", "
3 | \n", "11003 | \n", "0.000937 | \n", "0.95 | \n", "0.000040 | \n", "10 | \n", "3 | \n", "0.36 | \n", "0.36 | \n", "9.64 | \n", "2.64 | \n", "... | \n", "0.001707 | \n", "0.006830 | \n", "0.319650 | \n", "0.557484 | \n", "0.013588 | \n", "0.053216 | \n", "0.015723 | \n", "0.061468 | \n", "0.075911 | \n", "0.195788 | \n", "
4 | \n", "11004 | \n", "-0.000102 | \n", "0.50 | \n", "1.000000 | \n", "9 | \n", "0 | \n", "0.11 | \n", "0.11 | \n", "8.89 | \n", "-0.11 | \n", "... | \n", "0.002780 | \n", "0.011122 | \n", "0.012552 | \n", "0.047982 | \n", "0.013267 | \n", "0.051478 | \n", "0.108119 | \n", "0.253575 | \n", "0.543772 | \n", "0.865269 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
75 | \n", "11035 | \n", "0.000037 | \n", "0.70 | \n", "0.115318 | \n", "13 | \n", "0 | \n", "0.74 | \n", "0.74 | \n", "12.26 | \n", "-0.74 | \n", "... | \n", "0.029764 | \n", "0.116396 | \n", "0.014993 | \n", "0.058493 | \n", "0.013146 | \n", "0.051403 | \n", "0.014328 | \n", "0.055835 | \n", "0.440177 | \n", "0.745938 | \n", "
76 | \n", "11036 | \n", "-0.000106 | \n", "0.40 | \n", "0.503445 | \n", "8 | \n", "0 | \n", "0.85 | \n", "0.85 | \n", "7.15 | \n", "-0.85 | \n", "... | \n", "0.036085 | \n", "0.139590 | \n", "0.073136 | \n", "0.156222 | \n", "0.013068 | \n", "0.050787 | \n", "0.486932 | \n", "0.894268 | \n", "0.390852 | \n", "0.679537 | \n", "
77 | \n", "11037 | \n", "-0.000205 | \n", "0.10 | \n", "0.000402 | \n", "11 | \n", "0 | \n", "0.48 | \n", "0.48 | \n", "10.52 | \n", "-0.48 | \n", "... | \n", "0.003910 | \n", "0.015639 | \n", "0.216731 | \n", "0.597226 | \n", "0.014016 | \n", "0.055769 | \n", "0.002508 | \n", "0.010032 | \n", "0.295958 | \n", "0.651815 | \n", "
78 | \n", "11038 | \n", "-0.000061 | \n", "0.50 | \n", "1.000000 | \n", "10 | \n", "1 | \n", "0.43 | \n", "0.43 | \n", "9.57 | \n", "0.57 | \n", "... | \n", "0.058918 | \n", "0.220250 | \n", "0.998545 | \n", "0.999709 | \n", "0.015130 | \n", "0.059354 | \n", "0.925007 | \n", "0.999709 | \n", "0.997090 | \n", "0.999709 | \n", "
79 | \n", "11039 | \n", "-0.000064 | \n", "0.60 | \n", "0.503445 | \n", "7 | \n", "0 | \n", "0.69 | \n", "0.69 | \n", "6.31 | \n", "-0.69 | \n", "... | \n", "0.001653 | \n", "0.006613 | \n", "0.019312 | \n", "0.075443 | \n", "0.013375 | \n", "0.052600 | \n", "0.098137 | \n", "0.222122 | \n", "0.106102 | \n", "0.306583 | \n", "
80 rows × 242 columns
\n", "