/* * ------------------------------------------------- * nfcore custom profile Nextflow config file * ------------------------------------------------- * Config options for all custom environments. * Cluster-specific config options should be saved * in the conf folder and imported under a profile * name here. */ //Please use a new line per include Config section to allow easier linting/parsing. Thank you. profiles { abims { includeConfig "${params.custom_config_base}/conf/abims.config" } adcra { includeConfig "${params.custom_config_base}/conf/adcra.config" } alice { includeConfig "${params.custom_config_base}/conf/alice.config" } apollo { includeConfig "${params.custom_config_base}/conf/apollo.config" } arcc { includeConfig "${params.custom_config_base}/conf/arcc.config" } aws_tower { includeConfig "${params.custom_config_base}/conf/aws_tower.config" } awsbatch { includeConfig "${params.custom_config_base}/conf/awsbatch.config" } azurebatch { includeConfig "${params.custom_config_base}/conf/azurebatch.config" } bi { includeConfig "${params.custom_config_base}/conf/bi.config" } bigpurple { includeConfig "${params.custom_config_base}/conf/bigpurple.config" } bih { includeConfig "${params.custom_config_base}/conf/bih.config" } binac { includeConfig "${params.custom_config_base}/conf/binac.config" } biohpc_gen { includeConfig "${params.custom_config_base}/conf/biohpc_gen.config" } biowulf { includeConfig "${params.custom_config_base}/conf/biowulf.config" } bluebear { includeConfig "${params.custom_config_base}/conf/bluebear.config" } cambridge { includeConfig "${params.custom_config_base}/conf/cambridge.config" } cbe { includeConfig "${params.custom_config_base}/conf/cbe.config" } ccga_dx { includeConfig "${params.custom_config_base}/conf/ccga_dx.config" } ccga_med { includeConfig "${params.custom_config_base}/conf/ccga_med.config" } ceci_dragon2 { includeConfig "${params.custom_config_base}/conf/ceci_dragon2.config" } ceci_nic5 { includeConfig "${params.custom_config_base}/conf/ceci_nic5.config" } cedars { includeConfig "${params.custom_config_base}/conf/cedars.config" } ceres { includeConfig "${params.custom_config_base}/conf/ceres.config" } cfc { includeConfig "${params.custom_config_base}/conf/cfc.config" } cfc_dev { includeConfig "${params.custom_config_base}/conf/cfc_dev.config" } cheaha { includeConfig "${params.custom_config_base}/conf/cheaha.config" } computerome { includeConfig "${params.custom_config_base}/conf/computerome.config" } create { includeConfig "${params.custom_config_base}/conf/create.config" } crg { includeConfig "${params.custom_config_base}/conf/crg.config" } crick { includeConfig "${params.custom_config_base}/conf/crick.config" } crukmi { includeConfig "${params.custom_config_base}/conf/crukmi.config" } csiro_petrichor { includeConfig "${params.custom_config_base}/conf/csiro_petrichor.config" } czbiohub_aws { includeConfig "${params.custom_config_base}/conf/czbiohub_aws.config" } daisybio { includeConfig "${params.custom_config_base}/conf/daisybio.config" } denbi_qbic { includeConfig "${params.custom_config_base}/conf/denbi_qbic.config" } dkfz { includeConfig "${params.custom_config_base}/conf/dkfz.config" } ebc { includeConfig "${params.custom_config_base}/conf/ebc.config" } eddie { includeConfig "${params.custom_config_base}/conf/eddie.config" } ebi_codon { includeConfig "${params.custom_config_base}/conf/ebi_codon.config" } ebi_codon_slurm { includeConfig "${params.custom_config_base}/conf/ebi_codon_slurm.config" } einstein { includeConfig "${params.custom_config_base}/conf/einstein.config" } embl_hd { includeConfig "${params.custom_config_base}/conf/embl_hd.config" } engaging { includeConfig "${params.custom_config_base}/conf/engaging.config" } ethz_euler { includeConfig "${params.custom_config_base}/conf/ethz_euler.config" } eva { includeConfig "${params.custom_config_base}/conf/eva.config" } fgcz { includeConfig "${params.custom_config_base}/conf/fgcz.config" } fub_curta { includeConfig "${params.custom_config_base}/conf/fub_curta.config" } genotoul { includeConfig "${params.custom_config_base}/conf/genotoul.config" } genouest { includeConfig "${params.custom_config_base}/conf/genouest.config" } giga { includeConfig "${params.custom_config_base}/conf/giga.config" } gis { includeConfig "${params.custom_config_base}/conf/gis.config" } google { includeConfig "${params.custom_config_base}/conf/google.config" } googlebatch { includeConfig "${params.custom_config_base}/conf/googlebatch.config" } googlels { includeConfig "${params.custom_config_base}/conf/googlels.config" } hasta { includeConfig "${params.custom_config_base}/conf/hasta.config" } hki { includeConfig "${params.custom_config_base}/conf/hki.config" } hypatia { includeConfig "${params.custom_config_base}/conf/hypatia.config" } icr_davros { includeConfig "${params.custom_config_base}/conf/icr_davros.config" } ifb_core { includeConfig "${params.custom_config_base}/conf/ifb_core.config" } imb { includeConfig "${params.custom_config_base}/conf/imb.config" } imperial { includeConfig "${params.custom_config_base}/conf/imperial.config" } incliva { includeConfig "${params.custom_config_base}/conf/incliva.config" } ipop_up { includeConfig "${params.custom_config_base}/conf/ipop_up.config" } janelia { includeConfig "${params.custom_config_base}/conf/janelia.config" } jax { includeConfig "${params.custom_config_base}/conf/jax.config" } jex { includeConfig "${params.custom_config_base}/conf/jex.config" } ku_sund_danhead { includeConfig "${params.custom_config_base}/conf/ku_sund_danhead.config" } leicester { includeConfig "${params.custom_config_base}/conf/leicester.config" } lugh { includeConfig "${params.custom_config_base}/conf/lugh.config" } m3c { includeConfig "${params.custom_config_base}/conf/m3c.config" } maestro { includeConfig "${params.custom_config_base}/conf/maestro.config" } mana { includeConfig "${params.custom_config_base}/conf/mana.config" } marjorie { includeConfig "${params.custom_config_base}/conf/marjorie.config" } marvin { includeConfig "${params.custom_config_base}/conf/marvin.config" } mccleary { includeConfig "${params.custom_config_base}/conf/mccleary.config" } medair { includeConfig "${params.custom_config_base}/conf/medair.config" } mjolnir_globe { includeConfig "${params.custom_config_base}/conf/mjolnir_globe.config" } mpcdf { includeConfig "${params.custom_config_base}/conf/mpcdf.config" } mpcdf_viper { includeConfig "${params.custom_config_base}/conf/mpcdf_viper.config" } munin { includeConfig "${params.custom_config_base}/conf/munin.config" } nci_gadi { includeConfig "${params.custom_config_base}/conf/nci_gadi.config" } nu_genomics { includeConfig "${params.custom_config_base}/conf/nu_genomics.config" } nygc { includeConfig "${params.custom_config_base}/conf/nygc.config" } nyu_hpc { includeConfig "${params.custom_config_base}/conf/nyu_hpc.config" } oist { includeConfig "${params.custom_config_base}/conf/oist.config" } pasteur { includeConfig "${params.custom_config_base}/conf/pasteur.config" } pawsey_nimbus { includeConfig "${params.custom_config_base}/conf/pawsey_nimbus.config" } pawsey_setonix { includeConfig "${params.custom_config_base}/conf/pawsey_setonix.config" } pdc_kth { includeConfig "${params.custom_config_base}/conf/pdc_kth.config" } pe2 { includeConfig "${params.custom_config_base}/conf/pe2.config" } phoenix { includeConfig "${params.custom_config_base}/conf/phoenix.config" } psmn { includeConfig "${params.custom_config_base}/conf/psmn.config" } qmul_apocrita { includeConfig "${params.custom_config_base}/conf/qmul_apocrita.config" } rosalind { includeConfig "${params.custom_config_base}/conf/rosalind.config" } rosalind_uge { includeConfig "${params.custom_config_base}/conf/rosalind_uge.config" } roslin { includeConfig "${params.custom_config_base}/conf/roslin.config" } sage { includeConfig "${params.custom_config_base}/conf/sage.config" } sahmri { includeConfig "${params.custom_config_base}/conf/sahmri.config" } sanger { includeConfig "${params.custom_config_base}/conf/sanger.config" } ilifu { includeConfig "${params.custom_config_base}/conf/ilifu.config" } scw { includeConfig "${params.custom_config_base}/conf/scw.config" } seawulf { includeConfig "${params.custom_config_base}/conf/seawulf.config" } seg_globe { includeConfig "${params.custom_config_base}/conf/seg_globe.config" } self_hosted_runner { includeConfig "${params.custom_config_base}/conf/self_hosted_runner.config" } shu_bmrc { includeConfig "${params.custom_config_base}/conf/shu_bmrc.config" } software_license { includeConfig "${params.custom_config_base}/conf/software_license.config" } stjude { includeConfig "${params.custom_config_base}/conf/stjude.config" } tes { includeConfig "${params.custom_config_base}/conf/tes.config" } tigem { includeConfig "${params.custom_config_base}/conf/tigem.config" } tubingen_apg { includeConfig "${params.custom_config_base}/conf/tubingen_apg.config" } tufts { includeConfig "${params.custom_config_base}/conf/tufts.config" } tuos_stanage { includeConfig "${params.custom_config_base}/conf/tuos_stanage.config" } ucd_sonic { includeConfig "${params.custom_config_base}/conf/ucd_sonic.config" } ucl_cscluster { includeConfig "${params.custom_config_base}/conf/ucl_cscluster.config" } ucl_myriad { includeConfig "${params.custom_config_base}/conf/ucl_myriad.config" } uct_hpc { includeConfig "${params.custom_config_base}/conf/uct_hpc.config" } uge { includeConfig "${params.custom_config_base}/conf/uge.config" } unc_lccc { includeConfig "${params.custom_config_base}/conf/unc_lccc.config" } unc_longleaf { includeConfig "${params.custom_config_base}/conf/unc_longleaf.config" } unibe_ibu { includeConfig "${params.custom_config_base}/conf/unibe_ibu.config" } uod_hpc { includeConfig "${params.custom_config_base}/conf/uod_hpc.config" } uppmax { includeConfig "${params.custom_config_base}/conf/uppmax.config" } utd_ganymede { includeConfig "${params.custom_config_base}/conf/utd_ganymede.config" } uw_hyak_pedslabs { includeConfig "${params.custom_config_base}/conf/uw_hyak_pedslabs.config" } uzh { includeConfig "${params.custom_config_base}/conf/uzh.config" } uzl_omics { includeConfig "${params.custom_config_base}/conf/uzl_omics.config" } vai { includeConfig "${params.custom_config_base}/conf/vai.config" } vsc_calcua { includeConfig "${params.custom_config_base}/conf/vsc_calcua.config" } vsc_kul_uhasselt { includeConfig "${params.custom_config_base}/conf/vsc_kul_uhasselt.config" } vsc_ugent { includeConfig "${params.custom_config_base}/conf/vsc_ugent.config" } wehi { includeConfig "${params.custom_config_base}/conf/wehi.config" } wustl_htcf { includeConfig "${params.custom_config_base}/conf/wustl_htcf.config" } xanadu { includeConfig "${params.custom_config_base}/conf/xanadu.config" } york_viking { includeConfig "${params.custom_config_base}/conf/york_viking.config" } }