#
# Hi there!  Welcome to the yt installation script.
#
# First things first, if you experience problems, please visit the Help
# section at http://yt-project.org.
#
# This script is designed to create a fully isolated Python installation
# with the dependencies you need to run yt.
#
# If you would like to customize the yt installation, then please edit
# the following options.

# If you do not have a working compiler environment, use the following 
# configuration:

INST_CONDA=1       # Should yt's dependencies be installed using miniconda?
INST_YT_SOURCE=0   # Should yt itself be installed from source?

# If you want to install yt's dependencies using conda but want to build yt
# itself from source, use the following configuration:

# INST_CONDA=1
# INST_YT_SOURCE=1

# If you would like to build yt and all dependencies from source, then
# use the following configuration by uncommenting the lines below.
# NOTE: Building yt's dependencies from source will cause the install script
# to require substantially more time to finish.

# INST_CONDA=0
# INST_YT_SOURCE=1

BRANCH="master" # This is the branch we will install from for source installs

# What follows are some other options that you may or may not need to change.

# Here's where you put the HDF5 path if you like; otherwise it'll download it
# and install it on its own
#HDF5_DIR=

# If you've got yt some other place, set this to point to it. The script will
# already check the current directory and the one above it in the tree.
YT_DIR=""

# These options can be set to customize the installation.

INST_PY3=1          # Install Python 3 instead of Python 2. If this is turned
                    # on, all Python packages (including yt) will be installed
                    # in Python 3.
INST_GIT=1          # Install git or not?  If git is not already installed, yt
                    # cannot be installed from source. Ignored if INST_CONDA=0
INST_HG=0           # Install Mercurial or not? Ignored if INST_CONDA=0.
INST_EMBREE=0       # Install dependencies needed for Embree-accelerated 
                    # ray tracing

# These options control whether low-level system libraries are installed
# they are necessary for building yt's dependencies from source and are 
# ignored when INST_CONDA=1

INST_ZLIB=1     # On some systems (Kraken) matplotlib has issues with
                # the system zlib, which is compiled statically.
                # If need be, you can turn this off. 
INST_BZLIB=1    # On some systems, libbzip2 is missing.  This can
                # lead to broken mercurial installations.
INST_PNG=1      # Install a local libpng?  Same things apply as with zlib.
INST_FTYPE=1    # Install FreeType2 locally?
INST_SQLITE3=1  # Install a local version of SQLite3?
INST_0MQ=1      # Install 0mq (for IPython) and affiliated bindings?

# These variables control whether optional dependencies are installed

INST_PYX=0      # Install PyX?  Sometimes PyX can be problematic without a
                # working TeX installation.
INST_ROCKSTAR=0 # Install the Rockstar halo finder?
INST_SCIPY=0    # Install scipy?
INST_H5PY=1     # Install h5py?
INST_ASTROPY=0  # Install astropy?
INST_NOSE=1     # Install nose?
INST_NETCDF4=1  # Install netcdf4 and its python bindings?

# These options allow you to customize the builds of yt dependencies.
# They are only used if INST_CONDA=0.

# If you need to pass anything to the matplotlib build, do so here.
MPL_SUPP_LDFLAGS=""
MPL_SUPP_CFLAGS=""
MPL_SUPP_CXXFLAGS=""

# If you need to supply arguments to the NumPy or SciPy build, supply them here
# This one turns on gfortran manually:
#NUMPY_ARGS="--fcompiler=gnu95"
# If you absolutely can't get the fortran to work, try this:
#NUMPY_ARGS="--fcompiler=fake"

# If you want to spawn multiple Make jobs, here's the place to set the
# arguments.  For instance, "-j4"
MAKE_PROCS=""

# These variables control which miniconda version and yt recipe are used
# when INST_CONDA=1.

MINICONDA_URLBASE="http://repo.continuum.io/miniconda"
MINICONDA_VERSION="latest"

if [ ${REINST_YT} ] && [ ${REINST_YT} -eq 1 ] && [ -n ${YT_DEST} ]
then
    DEST_DIR=${YT_DEST}
    INST_CONDA=0
fi

if [ $INST_CONDA -ne 0 ]
then
    if [ ! -z "${CONDA_DEFAULT_ENV}" ]
    then
        echo "Aborting the yt installation because you appear to already"
        echo "have a conda environment activated. Either deactivate it with:"
        echo
        echo "    $ source deactivate"
        echo
        echo "or install yt into your current environment with:"
        echo
        echo "    $ conda install -c conda-forge yt"
        echo
        exit 1
    fi
    DEST_SUFFIX="yt-conda"
    if [ -n "${PYTHONPATH}" ]
    then
        echo "WARNING WARNING WARNING WARNING WARNING WARNING WARNING"
        echo "*******************************************************"
        echo
        echo "The PYTHONPATH environment variable is set to:"
        echo
        echo "    $PYTHONPATH"
        echo
        echo "If dependencies of yt (numpy, scipy, matplotlib) are installed"
        echo "to this path, this may cause issues. Exit the install script"
        echo "with Ctrl-C and unset PYTHONPATH if you are unsure."
        echo "Hit enter to continue."
        echo
        echo "WARNING WARNING WARNING WARNING WARNING WARNING WARNING"
        echo "*******************************************************"
        read -p "[hit enter]"
    fi
else
    if [ $INST_YT_SOURCE -eq 0 ]
    then
        echo "yt must be compiled from source if INST_CONDA is set to 0"
        echo "Please set INST_YT_SOURCE to 1 and re-run."
        exit 1
    fi
    if [ $INST_GIT -eq 1 ]
    then
        INST_GIT=0
    fi
    DEST_SUFFIX="yt-`uname -m`"
fi

if [ -z "${DEST_DIR}" ]
then
    DEST_DIR="`pwd`/${DEST_SUFFIX/ /}"   # Installation location
fi

# Make sure we are NOT being run as root
if [[ $EUID -eq 0 ]]
then
   echo "******************************************************"
   echo "*                                                    *"
   echo "*                                                    *"
   echo "*  IT IS A BAD IDEA TO RUN THIS SCRIPT AS ROOT!!!!   *"
   echo "*                                                    *"
   echo "*                                                    *"
   echo "******************************************************"
   echo
   echo "If you really want to do this, you must manually edit"
   echo "the script to re-enable root-level installation.  Sorry!"
   exit 1
fi
if [[ ${DEST_DIR%/} == /usr/local ]]
then
   echo "******************************************************"
   echo "*                                                    *"
   echo "*                                                    *"
   echo "*  THIS SCRIPT WILL NOT INSTALL TO /usr/local !!!!   *"
   echo "*                                                    *"
   echo "*                                                    *"
   echo "******************************************************"
   echo
   echo "If you really want to do this, you must manually edit"
   echo "the script."
   echo "Sorry!"
   exit 1
fi

#------------------------------------------------------------------------------#
#                                                                              #
# Okay, the script starts here.  Feel free to play with it, but hopefully      #
# it'll work as is.                                                            #
#                                                                              #
#------------------------------------------------------------------------------#

LOG_FILE="${DEST_DIR}/yt_install.log"

function write_config
{
    CONFIG_FILE=${DEST_DIR}/.yt_config

    echo INST_GIT=${INST_GIT} > ${CONFIG_FILE}
    echo INST_ZLIB=${INST_ZLIB} >> ${CONFIG_FILE}
    echo INST_BZLIB=${INST_BZLIB} >> ${CONFIG_FILE}
    echo INST_PNG=${INST_PNG} >> ${CONFIG_FILE}
    echo INST_FTYPE=${INST_FTYPE} >> ${CONFIG_FILE}
    echo INST_SQLITE3=${INST_SQLITE3} >> ${CONFIG_FILE}
    echo INST_PYX=${INST_PYX} >> ${CONFIG_FILE}
    echo INST_0MQ=${INST_0MQ} >> ${CONFIG_FILE}
    echo INST_PY3=${INST_PY3} >> ${CONFIG_FILE}
    echo INST_ROCKSTAR=${INST_ROCKSTAR} >> ${CONFIG_FILE}
    echo INST_SCIPY=${INST_SCIPY} >> ${CONFIG_FILE}
    echo YT_DIR=${YT_DIR} >> ${CONFIG_FILE}
    echo MPL_SUPP_LDFLAGS=${MPL_SUPP_LDFLAGS} >> ${CONFIG_FILE}
    echo MPL_SUPP_CFLAGS=${MPL_SUPP_CFLAGS} >> ${CONFIG_FILE}
    echo MPL_SUPP_CXXFLAGS=${MPL_SUPP_CXXFLAGS} >> ${CONFIG_FILE}
    echo MAKE_PROCS=${MAKE_PROCS} >> ${CONFIG_FILE}
    if [ ${HDF5_DIR} ]
    then
        echo ${HDF5_DIR} >> ${CONFIG_FILE}
    fi
    if [ ${NUMPY_ARGS} ]
    then
        echo ${NUMPY_ARGS} >> ${CONFIG_FILE}
    fi
}

function get_willwont
{
    if [ $1 -eq 1 ]
    then
        echo -n "will  "
    else
        echo -n "won't "
    fi
}

function host_specific
{
    MYHOST=`hostname -s`  # just give the short one, not FQDN
    MYHOSTLONG=`hostname` # FQDN, for Ranger
    MYOS=`uname -s`       # A guess at the OS
    if [ "${MYHOST##kraken}" != "${MYHOST}" ]
    then
        echo "Looks like you're on Kraken."
        echo
        echo " ******************************************"
        echo " * It may be better to use the yt module! *"
        echo " *                                        *"
        echo " *   $ module load yt                     *"
        echo " *                                        *"
        echo " ******************************************"
        echo
        echo "IF YOU CHOOSE TO PROCEED:"
        echo "YOU MUST BE IN THE GNU PROGRAMMING ENVIRONMENT"
        echo "   $ module swap PrgEnv-pgi PrgEnv-gnu"
        echo
        return
    fi
    if [ "${MYHOST##nautilus}" != "${MYHOST}" ]
    then
        echo "Looks like you're on Nautilus."
        echo
        echo " ******************************************"
        echo " * It may be better to use the yt module! *"
        echo " *                                        *"
        echo " *   $ module load yt                     *"
        echo " *                                        *"
        echo " ******************************************"
        echo
        echo "NOTE: YOU MUST BE IN THE GNU PROGRAMMING ENVIRONMENT"
        echo "   $ module swap PE-intel PE-gnu"
        echo
        echo "Additionally, note that by default, yt will OVERWRITE"
        echo "any existing installations from Kraken!  You might want"
        echo "to adjust the variable DEST_SUFFIX in the install script."
        echo
        return
    fi
    if [ "${MYHOST##verne}" != "${MYHOST}" ]
    then
        echo "Looks like you're on Verne."
        echo
        echo "NOTE: YOU MUST BE IN THE GNU PROGRAMMING ENVIRONMENT"
        echo "This command will take care of that for you:"
        echo
        echo "   $ module swap PE-pgi PE-gnu"
        echo
    fi
    if [ "${MYHOST##steele}" != "${MYHOST}" ]
    then
        echo "Looks like you're on Steele."
        echo
        echo "NOTE: YOU MUST BE IN THE GNU PROGRAMMING ENVIRONMENT"
        echo "These commands should take care of that for you:"
        echo
        echo "   $ module purge"
        echo "   $ module load gcc"
        echo
    fi
    if [ "${MYHOST##midway}" != "${MYHOST}" ]
    then
        echo "Looks like you're on Midway."
        echo
        echo " ******************************************"
        echo " * It may be better to use the yt module! *"
        echo " *                                        *"
        echo " *   $ module load yt                     *"
        echo " *                                        *"
        echo " ******************************************"
        echo
        return
    fi
    if [ "${MYOS##Darwin}" != "${MYOS}" ]
    then
        echo "Looks like you're running on Mac OSX."
        echo
        echo "NOTE: you must have the Xcode command line tools installed."
        echo
        echo "The instructions for obtaining these tools varies according"
        echo "to your exact OS version.  On older versions of OS X, you"
        echo "must register for an account on the apple developer tools"
        echo "website: https://developer.apple.com/downloads to obtain the"
        echo "download link."
        echo
        echo "We have gathered some additional instructions for each"
        echo "version of OS X below. If you have trouble installing yt"
        echo "after following these instructions, don't hesitate to contact"
        echo "the yt user's e-mail list."
        echo
        echo "You can see which version of OSX you are running by clicking"
        echo "'About This Mac' in the apple menu on the left hand side of"
        echo "menu bar.  We're assuming that you've installed all operating"
        echo "system updates; if you have an older version, we suggest"
        echo "running software update and installing all available updates."
        echo
        echo "OS X 10.5.8: search for and download Xcode 3.1.4 from the"
        echo "Apple developer tools website."
        echo
        echo "OS X 10.6.8: search for and download Xcode 3.2 from the Apple"
        echo "developer tools website.  You can either download the"
        echo "Xcode 3.2.2 Developer Tools package (744 MB) and then use"
        echo "Software Update to update to XCode 3.2.6 or"
        echo "alternatively, you can download the Xcode 3.2.6/iOS SDK"
        echo "bundle (4.1 GB)."
        echo
        echo "OS X 10.7.5: download Xcode 4.2 from the mac app store"
        echo "(search for Xcode)."
        echo "Alternatively, download the Xcode command line tools from"
        echo "the Apple developer tools website."
        echo
        echo "OS X 10.8.4, 10.9, 10.10, and 10.11:"
        echo "download the appropriate version of Xcode from the"
        echo "mac app store (search for Xcode)."
        echo
        echo "Additionally, you will have to manually install the Xcode"
        echo "command line tools."
        echo
        echo "For OS X 10.8, see:"
        echo "http://stackoverflow.com/questions/9353444"
        echo
        echo "For OS X 10.9 and newer the command line tools can be installed"
        echo "with the following command:"
        echo "    xcode-select --install"
        echo
        if [ $INST_CONDA -eq 0 ]
        then
            echo "For OS X 10.11, you will additionally need to install the"
            echo "OpenSSL library using a package manager like homebrew or"
            echo "macports."
            echo
            echo "If your install fails with a message like"
            echo "    ImportError: cannot import HTTPSHandler"
            echo "then you do not have the OpenSSL headers available in a"
            echo "location visible to your C compiler. Consider setting"
            echo "INST_CONDA=1 instead, as conda's python bundles OpenSSL."
        fi
        OSX_VERSION=`sw_vers -productVersion`
        if [ "${OSX_VERSION##10.8}" != "${OSX_VERSION}" ]
        then
            MPL_SUPP_CFLAGS="${MPL_SUPP_CFLAGS} -mmacosx-version-min=10.7"
            MPL_SUPP_CXXFLAGS="${MPL_SUPP_CXXFLAGS} -mmacosx-version-min=10.7"
        fi
    fi
    if [ -f /etc/redhat-release ]
    then
        echo "Looks like you're on an Redhat-compatible machine."
        echo
        echo "You need to have these packages installed:"
        echo
        echo "  * openssl-devel"
        echo "  * uuid-devel"
        echo "  * readline-devel"
        echo "  * ncurses-devel"
        echo "  * zip"
        echo "  * gcc-{,c++,gfortran}"
        echo "  * make"
        echo "  * patch"
        echo "  * git"
        echo
        echo "You can accomplish this by executing:"
        echo "$ sudo yum install gcc gcc-c++ gcc-gfortran make patch zip git"
        echo "$ sudo yum install ncurses-devel uuid-devel openssl-devel readline-devel"
    fi
    if [ -f /etc/SuSE-release ] && [ `grep --count SUSE /etc/SuSE-release` -gt 0 ]
    then
        echo "Looks like you're on an OpenSUSE-compatible machine."
        echo
        echo "You need to have these packages installed:"
        echo
        echo "  * devel_C_C++"
        echo "  * libopenssl-devel"
        echo "  * libuuid-devel"
        echo "  * zip"
        echo "  * gcc-c++"
        echo "  * git"
        echo
        echo "You can accomplish this by executing:"
        echo
        echo "$ sudo zypper install -t pattern devel_C_C++"
        echo "$ sudo zypper install git-core gcc-c++ libopenssl-devel libuuid-devel zip"
        echo
        echo "I am also setting special configure arguments to Python to"
        echo "specify control lib/lib64 issues."
        PYCONF_ARGS="--libdir=${DEST_DIR}/lib"
    fi
    if [ -f /etc/lsb-release ] && [ `grep --count buntu /etc/lsb-release` -gt 0 ]
    then
        echo "Looks like you're on an Ubuntu-compatible machine."
        echo
        echo "You need to have these packages installed:"
        echo
        echo "  * libssl-dev"
        echo "  * build-essential"
        echo "  * libncurses5"
        echo "  * libncurses5-dev"
        echo "  * zip"
        echo "  * uuid-dev"
        echo "  * libfreetype6-dev"
        echo "  * tk-dev"
        echo "  * git"
        echo
        echo "You can accomplish this by executing:"
        echo
        echo "$ sudo apt-get install libssl-dev build-essential libncurses5 libncurses5-dev zip uuid-dev libfreetype6-dev tk-dev git"
        echo
        echo
        echo " Additionally, if you want to put yt's lib dir in your LD_LIBRARY_PATH"
        echo " so you can use yt without the activate script, you might "
        echo " want to consider turning off LIBZ and FREETYPE in this"
        echo " install script by editing this file and setting"
        echo
        echo " INST_ZLIB=0"
        echo " INST_FTYPE=0"
        echo
        echo " to avoid conflicts with other command-line programs "
        echo " (like eog and evince, for example)."
    fi
    if [ $INST_SCIPY -eq 1 ]
    then
    echo
    echo "Looks like you've requested that the install script build SciPy."
    echo
    echo "If the SciPy build fails, please uncomment one of the the lines"
    echo "at the top of the install script that sets NUMPY_ARGS, delete"
    echo "any broken installation tree, and re-run the install script"
    echo "verbatim."
    echo
    echo "If that doesn't work, don't hesitate to ask for help on the yt"
    echo "user's mailing list."
    echo
    fi
    if [ ! -z "${CFLAGS}" ]
    then
        echo "******************************************"
        echo "******************************************"
        echo "**                                      **"
        echo "**    Your CFLAGS is not empty.         **"
        echo "**    This can break h5py compilation.  **"
        echo "**                                      **"
        echo "******************************************"
        echo "******************************************"
    fi
}

function log_cmd
{
    echo "EXECUTING:" >> ${LOG_FILE}
    echo "  $*" >> ${LOG_FILE}
    ( $* 2>&1 ) 1>> ${LOG_FILE} || do_exit
}

# set paths needed for Embree

if [ $INST_EMBREE -ne 0 ]
then
    if [ $INST_YT_SOURCE -eq 0 ]
    then
        echo "yt must be compiled from source to install Embree support."
        echo "Please set INST_YT_SOURCE to 1 and re-run the install script."
        exit 1
    fi
    if [ $INST_CONDA -eq 0 ]
    then
        echo "Embree support has not yet been implemented for INST_CONDA=0."
        exit 1
    fi
    if [ `uname` = "Darwin" ]
    then
        EMBREE="embree-2.8.0.x86_64.macosx"
        EMBREE_URL="https://github.com/embree/embree/releases/download/v2.8.0/$EMBREE.tar.gz"
    elif [ `uname` = "Linux" ]
    then
        EMBREE="embree-2.8.0.x86_64.linux"
        EMBREE_URL="https://github.com/embree/embree/releases/download/v2.8.0/$EMBREE.tar.gz"
    else
        echo "Embree is not supported on this platform."
        echo "Set INST_EMBREE=0 and re-run the install script."
        exit 1
    fi
    PYEMBREE_URL="https://github.com/scopatz/pyembree/archive/master.zip"
fi

if [ $INST_ROCKSTAR -ne 0 ]
then
    if [ $INST_YT_SOURCE -eq 0 ]
    then
        echo "yt must be compiled from source to install support for"
        echo "the rockstar halo finder. Please set INST_YT_SOURCE to 1"
        echo "and re-run the install script"
        exit 1
    fi
fi

if [ $INST_NETCDF4 -ne 0 ]
then
    if [ $INST_CONDA -eq 0 ]
    then
        echo "This script can only install netcdf4 through conda."
        echo "Please set INST_CONDA to 1 to install netcdf4"
        echo "Setting INST_NETCDF4=0"
        INST_NETCDF4=0
    fi
fi

echo
echo
echo "========================================================================"
echo
echo "Hi there!  This is the yt installation script.  We're going to download"
echo "some stuff and install it to create a self-contained, isolated"
echo "environment for yt to run within."
echo
echo "Inside the installation script you can set a few variables.  Here's what"
echo "they're currently set to -- you can hit Ctrl-C and edit the values in "
echo "the script if you aren't such a fan."
echo

printf "%-18s = %s so I " "INST_CONDA" "${INST_CONDA}"
get_willwont ${INST_CONDA}
echo "be installing a conda-based python environment"

printf "%-18s = %s so I " "INST_YT_SOURCE" "${INST_YT_SOURCE}"
get_willwont ${INST_YT_SOURCE}
echo "be compiling yt from source"

printf "%-18s = %s so I " "INST_PY3" "${INST_PY3}"
get_willwont ${INST_PY3}
echo "be installing Python 3"

printf "%-18s = %s so I " "INST_GIT" "${INST_GIT}"
get_willwont ${INST_GIT}
echo "be installing git"

printf "%-18s = %s so I " "INST_EMBREE" "${INST_EMBREE}"
get_willwont ${INST_EMBREE}
echo "be installing Embree"

if [ $INST_CONDA -eq 0 ]
then
    printf "%-18s = %s so I " "INST_ZLIB" "${INST_ZLIB}"
    get_willwont ${INST_ZLIB}
    echo "be installing zlib"

    printf "%-18s = %s so I " "INST_BZLIB" "${INST_BZLIB}"
    get_willwont ${INST_BZLIB}
    echo "be installing bzlib"

    printf "%-18s = %s so I " "INST_PNG" "${INST_PNG}"
    get_willwont ${INST_PNG}
    echo "be installing libpng"

    printf "%-18s = %s so I " "INST_FTYPE" "${INST_FTYPE}"
    get_willwont ${INST_FTYPE}
    echo "be installing freetype2"

    printf "%-18s = %s so I " "INST_SQLITE3" "${INST_SQLITE3}"
    get_willwont ${INST_SQLITE3}
    echo "be installing SQLite3"
fi

printf "%-18s = %s so I " "INST_PYX" "${INST_PYX}"
get_willwont ${INST_PYX}
echo "be installing PyX"

printf "%-18s = %s so I " "INST_ROCKSTAR" "${INST_ROCKSTAR}"
get_willwont ${INST_ROCKSTAR}
echo "be installing Rockstar"

printf "%-18s = %s so I " "INST_H5PY" "${INST_H5PY}"
get_willwont ${INST_H5PY}
echo "be installing h5py"

printf "%-18s = %s so I " "INST_ASTROPY" "${INST_ASTROPY}"
get_willwont ${INST_ASTROPY}
echo "be installing astropy"

printf "%-18s = %s so I " "INST_NOSE" "${INST_NOSE}"
get_willwont ${INST_NOSE}
echo "be installing nose"

echo

if [ $INST_CONDA -eq 0 ]
then
    if [ -z "$HDF5_DIR" ]
    then
        echo "HDF5_DIR is not set, so I will be installing HDF5"
    else
        echo "HDF5_DIR=${HDF5_DIR} , so I will not be installing HDF5"
    fi
fi

echo
echo "Installation will be to"
echo "  ${DEST_DIR}"
echo
echo "and I'll be logging the installation in"
echo "  ${LOG_FILE}"
echo
echo "I think that about wraps it up.  If you want to continue, hit enter.  "
echo "If you'd rather stop, maybe think things over, even grab a sandwich, "
echo "hit Ctrl-C."
echo

if [ $INST_YT_SOURCE -ne 0 ]
then
   host_specific
fi

if [ $INST_CONDA -eq 0 ]
then
    if [ ${USED_CONFIG} ]
    then
        echo "Settings were loaded from ${CONFIG_FILE}."
        echo "Remove this file if you wish to return to the default settings."
        echo
    fi
fi
echo "========================================================================"
echo
if [[ $1 != "--yes" ]]
then
    read -p "[hit enter] "
fi
echo
echo "Awesome!  Here we go."
echo

function do_exit
{
    echo "********************************************"
    echo "        FAILURE REPORT:"
    echo "********************************************"
    echo
    tail -n 10 ${LOG_FILE}
    echo
    echo "********************************************"
    echo "********************************************"
    echo "Failure.  Check ${LOG_FILE}.  The last 10 lines are above."
    exit 1
}

if [ $INST_PY3 -eq 1 ]
then
     PYTHON_EXEC='python3'
else 
     PYTHON_EXEC='python2.7'
fi

function do_setup_py
{
    [ -e $1/done ] && return
    LIB=$1
    shift
    if [ -z "$@" ]
    then
        echo "Installing $LIB"
    else
        echo "Installing $LIB (arguments: '$@')"
    fi
    [ ! -e $LIB/extracted ] && tar xfz $LIB.tar.gz
    touch $LIB/extracted
    BUILD_ARGS=""
    PYEXE=${PYTHON_EXEC}
    case $LIB in
        *h5py*)
            pushd $LIB &> /dev/null
            ( ${DEST_DIR}/bin/${PYTHON_EXEC} setup.py configure --hdf5=${HDF5_DIR} 2>&1 ) 1>> ${LOG_FILE} || do_exit
            popd &> /dev/null
            ;;
        *numpy*)
            if [ -e ${DEST_DIR}/lib/${PYTHON_EXEC}/site-packages/numpy/__init__.py ]
            then
                VER=$(${DEST_DIR}/bin/${PYTHON_EXEC} -c 'from distutils.version import StrictVersion as SV; \
                                                 import numpy; print SV(numpy.__version__) < SV("1.8.0")')
                if [ $VER == "True" ]
                then
                    echo "Removing previous NumPy instance (see issue #889)"
                    rm -rf ${DEST_DIR}/lib/${PYTHON_EXEC}/site-packages/{numpy*,*.pth}
                fi
            fi
            ;;
        *)
            ;;
    esac
    cd $LIB
    ( ${DEST_DIR}/bin/${PYEXE} setup.py build ${BUILD_ARGS} $* 2>&1 ) 1>> ${LOG_FILE} || do_exit
    ( ${DEST_DIR}/bin/${PYEXE} setup.py install    2>&1 ) 1>> ${LOG_FILE} || do_exit
    touch done
    cd ..
}

if type -P curl &>/dev/null
then
    echo "Using curl"
    export GETFILE="curl -sSOL"
else
    echo "Using wget"
    export GETFILE="wget -nv"
fi

if type -P sha512sum &> /dev/null
then
    echo "Using sha512sum"
    export SHASUM="sha512sum"
elif type -P shasum &> /dev/null
then
    echo "Using shasum -a 512"
    export SHASUM="shasum -a 512"
else
    echo
    echo "I am unable to locate any shasum-like utility."
    echo "ALL FILE INTEGRITY IS NOT VERIFIABLE."
    echo "THIS IS PROBABLY A BIG DEAL."
    echo
    echo "(I'll hang out for a minute for you to consider this.)"
    sleep 60
fi

function get_ytproject
{
    [ -e $1 ] && return
    echo "Downloading $1 from yt-project.org"
    ${GETFILE} "http://yt-project.org/dependencies/$1" || do_exit
    ( ${SHASUM} -c $1.sha512 2>&1 ) 1>> ${LOG_FILE} || do_exit
}

function get_ytdata
{
    echo "Downloading $1 from yt-project.org"
    [ -e $1 ] && return
    ${GETFILE} "http://yt-project.org/data/$1" || do_exit
    ( ${SHASUM} -c $1.sha512 2>&1 ) 1>> ${LOG_FILE} || do_exit
}

function test_install
{
    echo "Testing that yt can be imported"
    ( ${DEST_DIR}/bin/${PYTHON_EXEC} -c "import yt" 2>&1 ) 1>> ${LOG_FILE} || do_exit
}

ORIG_PWD=`pwd`

if [ -z "${DEST_DIR}" ]
then
    echo "Edit this script, set the DEST_DIR parameter and re-run."
    exit 1
fi

# Set paths to what they should be when yt is activated.
if [ $INST_CONDA -eq 0 ]
then
    export PATH=${DEST_DIR}/bin:$PATH
    export LD_LIBRARY_PATH=${DEST_DIR}/lib:$LD_LIBRARY_PATH
    export PYTHONPATH=${DEST_DIR}/lib/${PYTHON_EXEC}/site-packages

    # Write config settings to file.
    CONFIG_FILE=${DEST_DIR}/.yt_config
    mkdir -p ${DEST_DIR}
    if [ -z ${REINST_YT} ] || [ ${REINST_YT} -neq 1 ]
    then
        write_config
    elif [ ${REINST_YT} ] && [ ${REINST_YT} -eq 1 ] && [ -f ${CONFIG_FILE} ]
    then
        USED_CONFIG=1
        source ${CONFIG_FILE}
    fi
    
    # Get supplemental data.

    mkdir -p ${DEST_DIR}/data
    cd ${DEST_DIR}/data
    echo 'de6d8c6ea849f0206d219303329a0276b3cce7c051eec34377d42aacbe0a4f47ac5145eb08966a338ecddd2b83c8f787ca9956508ad5c39ee2088ad875166410  cloudy_emissivity.h5' > cloudy_emissivity.h5.sha512
    [ ! -e cloudy_emissivity.h5 ] && get_ytdata cloudy_emissivity.h5
    echo '0f714ae2eace0141b1381abf1160dc8f8a521335e886f99919caf3beb31df1fe271d67c7b2a804b1467949eb16b0ef87a3d53abad0e8160fccac1e90d8d9e85f  apec_emissivity.h5' > apec_emissivity.h5.sha512
    [ ! -e apec_emissivity.h5 ] && get_ytdata apec_emissivity.h5
    
    mkdir -p ${DEST_DIR}/src
    cd ${DEST_DIR}/src

    PYTHON2='Python-2.7.11'
    PYTHON3='Python-3.5.1'
    CYTHON='Cython-0.25.2'
    if [ $INST_PY3 -eq 0 ]
    then
        PYX='PyX-0.12.1'
    else
        PYX='PyX-0.14.1'
    fi
    BZLIB='bzip2-1.0.6'
    FREETYPE_VER='freetype-2.4.12' 
    H5PY='h5py-2.5.0'
    HDF5='hdf5-1.8.14' 
    LAPACK='lapack-3.4.2'
    PNG='libpng-1.6.3'
    MATPLOTLIB='matplotlib-1.5.1'
    NOSE='nose-1.3.7'
    NUMPY='numpy-1.11.0'
    GITPYTHON='GitPython-2.1.3'
    ROCKSTAR='rockstar-0.99.6'
    SCIPY='scipy-0.17.0'
    SQLITE='sqlite-autoconf-3071700'
    SYMPY='sympy-1.0'
    ZLIB='zlib-1.2.8'
    SETUPTOOLS='setuptools-20.6.7'
    ASTROPY='astropy-1.1.2'
    
    # Now we dump all our SHA512 files out.
    echo '1974b9374aeedb030307dc95aa6560ce9d5e1652783cd4552e96ef11663c73dd263e3521b68e7712abbb31628011e2e66320c5ee2577968684e2679eb80726e1  Cython-0.25.2.tar.gz' > Cython-0.25.2.tar.gz.sha512
    if [ $INST_PY3 -eq 0 ]
    then
        echo '4941f5aa21aff3743546495fb073c10d2657ff42b2aff401903498638093d0e31e344cce778980f28a7170c6d29eab72ac074277b9d4088376e8692dc71e55c1  PyX-0.12.1.tar.gz' > PyX-0.12.1.tar.gz.sha512
    else
        echo '16265bbdcaf28ce194189a2987b32952f296c850b829454bcccce0abd23838bfca0276c3e9c8e96b8cbfaf1473bf14669f9b7f2032ee039b61ae59ea3aa45a20  PyX-0.14.1.tar.gz' > PyX-0.14.1.tar.gz.sha512
    fi
    echo 'f21df53da87e9e3c14599a34388976e7dd09b951dff3c4b978fe224beeff07e749c0059ffd94f68ca9b75ecaef142b285d579b8dfaad4eab85aca33957114937  Python-2.7.11.tgz' > Python-2.7.11.tgz.sha512
    echo '73f1477f3d3f5bd978c4ea1d1b679467b45e9fd2f443287b88c5c107a9ced580c56e0e8f33acea84e06b11a252e2a4e733120b721a9b6e1bb3d34493a3353bfb  Python-3.5.1.tgz' > Python-3.5.1.tgz.sha512
    echo 'b83c4a1415a3eb8c016507705d0d2f22971e4da937bb97953eec08f8f856933d8fa76ce8c536122235b19e7879b16add2e20fd2fee3e488f9b2b4bf1b9f4dbdb  astropy-1.1.2.tar.gz' > astropy-1.1.2.tar.gz.sha512
    echo '276bd9c061ec9a27d478b33078a86f93164ee2da72210e12e2c9da71dcffeb64767e4460b93f257302b09328eda8655e93c4b9ae85e74472869afbeae35ca71e  blas.tar.gz' > blas.tar.gz.sha512
    echo '00ace5438cfa0c577e5f578d8a808613187eff5217c35164ffe044fbafdfec9e98f4192c02a7d67e01e5a5ccced630583ad1003c37697219b0f147343a3fdd12  bzip2-1.0.6.tar.gz' > bzip2-1.0.6.tar.gz.sha512
    echo '609a68a3675087e0cc95268574f31e104549daa48efe15a25a33b8e269a93b4bd160f4c3e8178dca9c950ef5ca514b039d6fd1b45db6af57f25342464d0429ce  freetype-2.4.12.tar.gz' > freetype-2.4.12.tar.gz.sha512
    echo '4a83f9ae1855a7fad90133b327d426201c8ccfd2e7fbe9f39b2d61a2eee2f3ebe2ea02cf80f3d4e1ad659f8e790c173df8cc99b87d0b7ce63d34aa88cfdc7939  h5py-2.5.0.tar.gz' > h5py-2.5.0.tar.gz.sha512
    echo '4073fba510ccadaba41db0939f909613c9cb52ba8fb6c1062fc9118edc601394c75e102310be1af4077d07c9b327e6bbb1a6359939a7268dc140382d0c1e0199  hdf5-1.8.14.tar.gz' > hdf5-1.8.14.tar.gz.sha512
    echo '8770214491e31f0a7a3efaade90eee7b0eb20a8a6ab635c5f854d78263f59a1849133c14ef5123d01023f0110cbb9fc6f818da053c01277914ae81473430a952  lapack-3.4.2.tar.gz' > lapack-3.4.2.tar.gz.sha512
    echo '887582e5a22e4cde338aa8fec7a89f6dd31f2f02b8842735f00f970f64582333fa03401cea6d01704083403c7e8b7ebc26655468ce930165673b33efa4bcd586  libpng-1.6.3.tar.gz' > libpng-1.6.3.tar.gz.sha512
    echo 'a0e78b5027a3a49cf8e77dc0d26f5f380dcd80f7b309b6121199acd5e1d94f48482864a9eee3bd397f7ac6f07fe1d3c21bf517217df3c72e8e3d105b7c2ae58e  matplotlib-1.5.1.tar.gz' > matplotlib-1.5.1.tar.gz.sha512
    echo 'e65c914f621f8da06b9ab11a0ff2763d6e29b82ce2aaed56da0e3773dc899d9deb1f20015789d44c65a5dad7214520f5b659b3f8d7695fb207ad3f78e5cf1b62  nose-1.3.7.tar.gz' > nose-1.3.7.tar.gz.sha512
    echo '92c1889397ad013e25da3a0657fc01e787d528fc19c29cc2acd286c3f07d41b984252583457b1b9259fc303afbe9694565cdcf5752eb4ecb950cc7a99ec1ad8b  numpy-1.11.0.tar.gz' > numpy-1.11.0.tar.gz.sha512
    echo '918ff1765a85a818619165c2bcbb0d417f35c979c2f42f1bb7e41636696c0cb4d6837725f3655fbdfebea966476d1255ee18adabe9ed5536455b63336a1f399d  GitPython-2.1.3.tar.gz' > GitPython-2.1.3.tar.gz.sha512
    echo 'de6409d75a3ff3cf1e5391d3b09126f0bc7e1a40a15f9bee244195638fe2f8481fca032896d8534623e6122ff59aaf669664e27ff89cf1b094a5ce7312f220b7  scipy-0.17.0.tar.gz' > scipy-0.17.0.tar.gz.sha512
    echo '96f3e51b46741450bc6b63779c10ebb4a7066860fe544385d64d1eda52592e376a589ef282ace2e1df73df61c10eab1a0d793abbdaf770e60289494d4bf3bcb4  sqlite-autoconf-3071700.tar.gz' > sqlite-autoconf-3071700.tar.gz.sha512
    echo '977db6e9bc6a5918cceb255981a57e85e7060c0922aefd2968b004d25d704e25a5cb5bbe09eb387e8695581e23e2825d9c40310068fe25ece7e9c23037a21f39  sympy-1.0.tar.gz' > sympy-1.0.tar.gz.sha512
    echo 'ece209d4c7ec0cb58ede791444dc754e0d10811cbbdebe3df61c0fd9f9f9867c1c3ccd5f1827f847c005e24eef34fb5bf87b5d3f894d75da04f1797538290e4a  zlib-1.2.8.tar.gz' > zlib-1.2.8.tar.gz.sha512
    echo '91a212b5007f9fdfacb4341e06dc0355c5c29897eb8ea407dd4864091f845ba1417bb0d33b5ed6897869d0233e2d0ec6548898d3dbe9eda23f751829bd51a104  setuptools-20.6.7.tar.gz' > setuptools-20.6.7.tar.gz.sha512
    # Individual processes
    [ -z "$HDF5_DIR" ] && get_ytproject $HDF5.tar.gz
    [ $INST_ZLIB -eq 1 ] && get_ytproject $ZLIB.tar.gz
    [ $INST_BZLIB -eq 1 ] && get_ytproject $BZLIB.tar.gz
    [ $INST_PNG -eq 1 ] && get_ytproject $PNG.tar.gz
    [ $INST_FTYPE -eq 1 ] && get_ytproject $FREETYPE_VER.tar.gz
    [ $INST_SQLITE3 -eq 1 ] && get_ytproject $SQLITE.tar.gz
    [ $INST_PYX -eq 1 ] && get_ytproject $PYX.tar.gz
    [ $INST_SCIPY -eq 1 ] && get_ytproject $SCIPY.tar.gz
    [ $INST_SCIPY -eq 1 ] && get_ytproject blas.tar.gz
    [ $INST_SCIPY -eq 1 ] && get_ytproject $LAPACK.tar.gz
    if [ $INST_PY3 -eq 1 ]
    then
        get_ytproject $PYTHON3.tgz
    else
        get_ytproject $PYTHON2.tgz
    fi
    [ $INST_H5PY -eq 1 ] && get_ytproject $H5PY.tar.gz
    [ $INST_NOSE -eq 1 ] && get_ytproject $NOSE.tar.gz
    [ $INST_ASTROPY -eq 1 ] && get_ytproject $ASTROPY.tar.gz
    get_ytproject $NUMPY.tar.gz
    get_ytproject $MATPLOTLIB.tar.gz
    get_ytproject $CYTHON.tar.gz
    get_ytproject $GITPYTHON.tar.gz
    get_ytproject $SYMPY.tar.gz
    get_ytproject $SETUPTOOLS.tar.gz

    if [ $INST_BZLIB -eq 1 ]
    then
        if [ ! -e $BZLIB/done ]
        then
            [ ! -e $BZLIB ] && tar xfz $BZLIB.tar.gz
            echo "Installing BZLIB"
            cd $BZLIB
            if [ `uname` = "Darwin" ]
            then
                if [ -z "${CC}" ]
                then
                    sed -i.bak 's/soname/install_name/' Makefile-libbz2_so
                else
                    sed -i.bak -e 's/soname/install_name/' -e "s|CC=gcc|CC=${CC}|" Makefile-libbz2_so
                fi
            fi
            ( make install CFLAGS=-fPIC LDFLAGS=-fPIC PREFIX=${DEST_DIR} 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make -f Makefile-libbz2_so CFLAGS=-fPIC LDFLAGS=-fPIC PREFIX=${DEST_DIR} 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( cp -v libbz2.so.1.0.6 ${DEST_DIR}/lib 2>&1 ) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
        BZLIB_DIR=${DEST_DIR}
        export LDFLAGS="${LDFLAGS} -L${BZLIB_DIR}/lib/ -L${BZLIB_DIR}/lib64/"
        LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${BZLIB_DIR}/lib/"
    fi

    if [ $INST_ZLIB -eq 1 ]
    then
        if [ ! -e $ZLIB/done ]
        then
            [ ! -e $ZLIB ] && tar xfz $ZLIB.tar.gz
            echo "Installing ZLIB"
            cd $ZLIB
            ( ./configure --shared --prefix=${DEST_DIR}/ 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make install 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make clean 2>&1 ) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
        ZLIB_DIR=${DEST_DIR}
        export LDFLAGS="${LDFLAGS} -L${ZLIB_DIR}/lib/ -L${ZLIB_DIR}/lib64/"
        LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${ZLIB_DIR}/lib/"
    fi
    
    if [ $INST_PNG -eq 1 ]
    then
        if [ ! -e $PNG/done ]
        then
            [ ! -e $PNG ] && tar xfz $PNG.tar.gz
            echo "Installing PNG"
            cd $PNG
            ( ./configure CPPFLAGS=-I${DEST_DIR}/include CFLAGS=-I${DEST_DIR}/include --prefix=${DEST_DIR}/ 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make install 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make clean 2>&1) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
        PNG_DIR=${DEST_DIR}
        export LDFLAGS="${LDFLAGS} -L${PNG_DIR}/lib/ -L${PNG_DIR}/lib64/"
        LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${PNG_DIR}/lib/"
    fi

    if [ $INST_FTYPE -eq 1 ]
    then
        if [ ! -e $FREETYPE_VER/done ]
        then
            [ ! -e $FREETYPE_VER ] && tar xfz $FREETYPE_VER.tar.gz
            echo "Installing FreeType2"
            cd $FREETYPE_VER
            ( ./configure CFLAGS=-I${DEST_DIR}/include --prefix=${DEST_DIR}/ 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make install 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make clean 2>&1) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
        FTYPE_DIR=${DEST_DIR}
        export LDFLAGS="${LDFLAGS} -L${FTYPE_DIR}/lib/ -L${FTYPE_DIR}/lib64/"
        LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${FTYPE_DIR}/lib/"
    fi

    if [ -z "$HDF5_DIR" ]
    then
        if [ ! -e $HDF5/done ]
        then
            [ ! -e $HDF5 ] && tar xfz $HDF5.tar.gz
            echo "Installing HDF5"
            cd $HDF5
            ( ./configure --prefix=${DEST_DIR}/ --enable-shared 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make ${MAKE_PROCS} install 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make clean 2>&1) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
        export HDF5_DIR=${DEST_DIR}
    else
        export HDF5_DIR=${HDF5_DIR}
    fi
    export HDF5_API=16

    if [ $INST_SQLITE3 -eq 1 ]
    then
        if [ ! -e $SQLITE/done ]
        then
            [ ! -e $SQLITE ] && tar xfz $SQLITE.tar.gz
            echo "Installing SQLite3"
            cd $SQLITE
            ( ./configure --prefix=${DEST_DIR}/ 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make ${MAKE_PROCS} install 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make clean 2>&1) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
    fi

    if [ $INST_PY3 -eq 1 ]
    then
        if [ ! -e $PYTHON3/done ]
        then
            echo "Installing Python 3"
            [ ! -e $PYTHON3 ] && tar xfz $PYTHON3.tgz
            cd $PYTHON3
            ( ./configure --prefix=${DEST_DIR}/ ${PYCONF_ARGS} 2>&1 ) 1>> ${LOG_FILE} || do_exit
            
            ( make ${MAKE_PROCS} 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make install 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( ln -sf ${DEST_DIR}/bin/python3.5 ${DEST_DIR}/bin/pyyt 2>&1 ) 1>> ${LOG_FILE}
            ( ln -sf ${DEST_DIR}/bin/python3.5 ${DEST_DIR}/bin/python 2>&1 ) 1>> ${LOG_FILE}
            ( ln -sf ${DEST_DIR}/bin/python3-config ${DEST_DIR}/bin/python-config 2>&1 ) 1>> ${LOG_FILE}
            ( make clean 2>&1) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
    else
        if [ ! -e $PYTHON2/done ]
        then
            echo "Installing Python 2. This may take a while, but don't worry. yt loves you."
            [ ! -e $PYTHON2 ] && tar xfz $PYTHON2.tgz
            cd $PYTHON2
            ( ./configure --prefix=${DEST_DIR}/ ${PYCONF_ARGS} 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make ${MAKE_PROCS} 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( make install 2>&1 ) 1>> ${LOG_FILE} || do_exit
            ( ln -sf ${DEST_DIR}/bin/python2.7 ${DEST_DIR}/bin/pyyt 2>&1 ) 1>> ${LOG_FILE}
            ( make clean 2>&1) 1>> ${LOG_FILE} || do_exit
            touch done
            cd ..
        fi
    fi

    ( ${DEST_DIR}/bin/python -c "import _ssl" 2>&1 ) 1>> ${LOG_FILE}
    RESULT=$?
    if  [ $RESULT -ne 0 ]
    then
        echo "Unable to import the python SSL bindings."
        echo "This means that OpenSSL is not installed or your system's OpenSSL"
        echo "installation is out of date."
        echo "Please install OpenSSL or set INST_CONDA=1"
        do_exit
    fi

    export PYTHONPATH=${DEST_DIR}/lib/${PYTHON_EXEC}/site-packages/

    # Install setuptools
    do_setup_py $SETUPTOOLS

    if type -P git &>/dev/null
    then
        GIT_EXE="git"
    else
        echo "Cannot find git. Please install git."
        do_exit
    fi

    if [ -z "$YT_DIR" ]
    then
        if [ -e $ORIG_PWD/yt/mods.py ]
        then
            YT_DIR="$ORIG_PWD"
        elif [ -e $ORIG_PWD/../yt/mods.py ]
        then
            YT_DIR=$(dirname $ORIG_PWD)
        elif [ ! -e yt-git ]
        then
            echo "Cloning yt"
            YT_DIR="$PWD/yt-git/"
            ( ${GIT_EXE} clone https://github.com/yt-project/yt/ ${YT_DIR} 2>&1 ) 1>> ${LOG_FILE}
        elif [ -e yt-git ]
        then
            YT_DIR="$PWD/yt-git/"
        fi
        echo Setting YT_DIR=${YT_DIR}
    fi
    
    # This fixes problems with gfortran linking.
    unset LDFLAGS

    echo "Installing pip"
    ( ${GETFILE} https://bootstrap.pypa.io/get-pip.py 2>&1 ) 1>> ${LOG_FILE} || do_exit
    ( ${DEST_DIR}/bin/${PYTHON_EXEC} get-pip.py 2>&1 ) 1>> ${LOG_FILE} || do_exit

    if [ $INST_SCIPY -eq 0 ]
    then
        do_setup_py $NUMPY ${NUMPY_ARGS}
    else
        if [ ! -e $SCIPY/done ]
        then
            if [ ! -e BLAS/done ]
            then
                tar xfz blas.tar.gz
                echo "Building BLAS"
                cd BLAS
                gfortran -O2 -fPIC -fno-second-underscore -c *.f
                ( ar r libfblas.a *.o 2>&1 ) 1>> ${LOG_FILE}
                ( ranlib libfblas.a 2>&1 ) 1>> ${LOG_FILE}
                rm -rf *.o
                touch done
                cd ..
            fi
            if [ ! -e $LAPACK/done ]
            then
                tar xfz $LAPACK.tar.gz
                echo "Building LAPACK"
                cd $LAPACK/
                cp INSTALL/make.inc.gfortran make.inc
                ( make lapacklib OPTS="-fPIC -O2" NOOPT="-fPIC -O0" CFLAGS=-fPIC LDFLAGS=-fPIC 2>&1 ) 1>> ${LOG_FILE} || do_exit
                touch done
                cd ..
            fi
        fi
        export BLAS=$PWD/BLAS/libfblas.a
        export LAPACK=$PWD/$LAPACK/liblapack.a
        do_setup_py $NUMPY ${NUMPY_ARGS}
        do_setup_py $SCIPY ${NUMPY_ARGS}
    fi
    
    if [ -n "${MPL_SUPP_LDFLAGS}" ]
    then
        OLD_LDFLAGS=${LDFLAGS}
        export LDFLAGS="${MPL_SUPP_LDFLAGS}"
        echo "Setting LDFLAGS ${LDFLAGS}"
    fi
    if [ -n "${MPL_SUPP_CXXFLAGS}" ]
    then
        OLD_CXXFLAGS=${CXXFLAGS}
        export CXXFLAGS="${MPL_SUPP_CXXFLAGS}"
        echo "Setting CXXFLAGS ${CXXFLAGS}"
    fi
    if [ -n "${MPL_SUPP_CFLAGS}" ]
    then
        OLD_CFLAGS=${CFLAGS}
        export CFLAGS="${MPL_SUPP_CFLAGS}"
        echo "Setting CFLAGS ${CFLAGS}"
    fi
    # Now we set up the basedir for matplotlib:
    mkdir -p ${DEST_DIR}/src/$MATPLOTLIB
    echo "[directories]" >> ${DEST_DIR}/src/$MATPLOTLIB/setup.cfg
    echo "basedirlist = ${DEST_DIR}" >> ${DEST_DIR}/src/$MATPLOTLIB/setup.cfg
    if [ `uname` = "Darwin" ]
    then
        echo "[gui_support]" >> ${DEST_DIR}/src/$MATPLOTLIB/setup.cfg
        echo "macosx = False" >> ${DEST_DIR}/src/$MATPLOTLIB/setup.cfg
    fi
    
    _user_DISPLAY=$DISPLAY
    unset DISPLAY   # see (yt-user link missing: "Installation failure" 01/29/15)
    do_setup_py $MATPLOTLIB
    export DISPLAY=${_user_DISPLAY}
    if [ -n "${OLD_LDFLAGS}" ]
    then
        export LDFLAG=${OLD_LDFLAGS}
    fi
    [ -n "${OLD_LDFLAGS}" ] && export LDFLAGS=${OLD_LDFLAGS}
    [ -n "${OLD_CXXFLAGS}" ] && export CXXFLAGS=${OLD_CXXFLAGS}
    [ -n "${OLD_CFLAGS}" ] && export CFLAGS=${OLD_CFLAGS}
    
    echo "Installing Jupyter"
    ( ${DEST_DIR}/bin/pip install "jupyter<2.0.0" 2>&1 ) 1>> ${LOG_FILE}
    
    do_setup_py $CYTHON
    if [ $INST_H5PY -eq 1 ]
    then
        do_setup_py $H5PY
    fi
    if [ $INST_NOSE -eq 1 ]
    then
        do_setup_py $NOSE
    fi
    if [ $INST_ASTROPY -eq 1 ]
    then
        do_setup_py $ASTROPY
    fi
    do_setup_py $GITPYTHON
    do_setup_py $SYMPY
    [ $INST_PYX -eq 1 ] && do_setup_py $PYX

    ( ${DEST_DIR}/bin/pip install jinja2 2>&1 ) 1>> ${LOG_FILE}
    
    # Now we build Rockstar and set its environment variable.
    if [ $INST_ROCKSTAR -eq 1 ]
    then
        if [ ! -e rockstar/done ]
        then
            echo "Building Rockstar"
            if [ ! -e rockstar ]
            then
                ( ${GIT_EXE} clone https://github.com/yt-project/rockstar 2>&1 ) 1>> ${LOG_FILE}
            fi
            cd rockstar
            ( make lib 2>&1 ) 1>> ${LOG_FILE} || do_exit
            cp librockstar.so ${DEST_DIR}/lib
            ROCKSTAR_DIR=${DEST_DIR}/src/rockstar
            echo $ROCKSTAR_DIR > ${YT_DIR}/rockstar.cfg
            touch done
            cd ..
        fi
    fi
    
    MY_PWD=`pwd`
    cd $YT_DIR
    ( ${GIT_EXE} pull 2>1 && ${GIT_EXE} checkout ${BRANCH} 2>&1 ) 1>> ${LOG_FILE}

    echo "Installing yt"
    [ $INST_PNG -eq 1 ] && echo $PNG_DIR > png.cfg
    ( export PATH=$DEST_DIR/bin:$PATH ; ${DEST_DIR}/bin/${PYTHON_EXEC} setup.py develop 2>&1 ) 1>> ${LOG_FILE} || do_exit
    touch done
    cd $MY_PWD

    if !( ( ${DEST_DIR}/bin/${PYTHON_EXEC} -c "import readline" 2>&1 )>> ${LOG_FILE}) || \
            [[ "${MYOS##Darwin}" != "${MYOS}" && $INST_PY3 -eq 1 ]] 
    then
        if !( ( ${DEST_DIR}/bin/${PYTHON_EXEC} -c "import gnureadline" 2>&1 )>> ${LOG_FILE})
        then
            echo "Installing pure-python readline"
            ( ${DEST_DIR}/bin/pip install gnureadline 2>&1 ) 1>> ${LOG_FILE}
        fi
    fi

    if [ -e $HOME/.matplotlib/fontList.cache ] && \
           ( grep -q python2.6 $HOME/.matplotlib/fontList.cache )
    then
        echo "WARNING WARNING WARNING WARNING WARNING WARNING WARNING"
        echo "*******************************************************"
        echo
        echo "  You likely need to remove your old fontList.cache!"
        echo "  You can do this with this command:"
        echo ""
        echo "  rm $HOME/.matplotlib/fontList.cache"
        echo
        echo "*******************************************************"
    fi
    
    # Add the environment scripts
    ( cp ${YT_DIR}/doc/activate ${DEST_DIR}/bin/activate 2>&1 ) 1>> ${LOG_FILE}
    sed -i.bak -e "s,__YT_DIR__,${DEST_DIR}," ${DEST_DIR}/bin/activate
    ( cp ${YT_DIR}/doc/activate.csh ${DEST_DIR}/bin/activate.csh 2>&1 ) 1>> ${LOG_FILE}
    sed -i.bak -e "s,__YT_DIR__,${DEST_DIR}," ${DEST_DIR}/bin/activate.csh

    test_install

    function print_afterword
    {
        echo
        echo
        echo "========================================================================"
        echo
        echo "yt is now installed in $DEST_DIR ."
        echo
        echo "To run from this new installation, use the activate script for this "
        echo "environment."
        echo
        echo "    $ source $DEST_DIR/bin/activate"
        echo
        echo "This modifies the environment variables YT_DEST, PATH, PYTHONPATH, and"
        echo "LD_LIBRARY_PATH to match your new yt install.  If you use csh, just"
        echo "append .csh to the above."
        echo
        echo "To get started with yt, check out the orientation:"
        echo
        echo "    http://yt-project.org/doc/quickstart/"
        echo
        echo "The source for yt is located at:"
        echo "    $YT_DIR"
        echo
        echo "For support, see the website and join the mailing list:"
        echo
        echo "    http://yt-project.org/"
        echo "    http://yt-project.org/data/      (Sample data)"
        echo "    http://yt-project.org/doc/       (Docs)"
        echo
        echo "    http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org"
        echo
        echo "========================================================================"
        echo
        echo "Oh, look at me, still talking when there's science to do!"
        echo "Good luck, and email the user list if you run into any problems."
    }

    print_afterword
    print_afterword >> ${LOG_FILE}

    echo "yt dependencies were last updated on" > ${DEST_DIR}/.yt_update
    date >> ${DEST_DIR}/.yt_update
else # INST_CONDA -eq 1
    MYARCH=`uname -m`       # A guess at the OS
    MYOS=`uname -s`

    if [ $MYOS = "Darwin" ]
    then
        MINICONDA_OS="MacOSX"
        MINICONDA_ARCH="x86_64"
    elif [ $MYOS = "Linux" ]
    then
        MINICONDA_OS="Linux"
        if [ $MYARCH = "i386" ]
        then
            MINICONDA_ARCH="x86"
        elif [ $MYARCH = "i686"  ]
        then
            MINICONDA_ARCH="x86"
        elif [ $MYARCH = "x86_64"  ]
        then
            MINICONDA_ARCH="x86_64"
        else
            echo "Not sure which architecture you are running."
            echo "Going with x86_64 architecture."
            MINICONDA_OS="Linux-x86_64"
        fi
    else
        echo "The yt install script is not supported on the ${MYOS}"
        echo "operating system."
        exit 1
    fi

    if [ $INST_PY3 -eq 1 ]
    then
        PY_VERSION='3'
    else
        PY_VERSION='2'
    fi

    MINICONDA_PKG="Miniconda${PY_VERSION}-${MINICONDA_VERSION}-${MINICONDA_OS}-${MINICONDA_ARCH}.sh"

    echo
    echo "Downloading ${MINICONDA_URLBASE}/${MINICONDA_PKG}"
    echo

    if [ -f ${MINICONDA_PKG} ]
    then
        rm $MINICONDA_PKG
    fi

    echo "Installing the Miniconda python environment."

    if [ -e ${DEST_DIR} ]
    then
        rm -rf $DEST_DIR/*
    else
        mkdir $DEST_DIR
    fi

    log_cmd ${GETFILE} ${MINICONDA_URLBASE}/${MINICONDA_PKG} || do_exit

    log_cmd bash ./${MINICONDA_PKG} -b -p $DEST_DIR -f

    # Need to set PATH so we use miniconda's python environment
    export PATH=${DEST_DIR}/bin:$PATH

    echo "Installing the necessary packages for yt."
    echo "This may take a while, but don't worry.  yt loves you."

    declare -a YT_DEPS
    YT_DEPS+=('python')
    YT_DEPS+=('setuptools')
    YT_DEPS+=('numpy')
    YT_DEPS+=('jupyter')
    YT_DEPS+=('ipython')
    YT_DEPS+=('sphinx')
    if [ ${INST_GIT} -eq 1 ]
    then
        YT_DEPS+=('git')
        YT_DEPS+=('gitpython')
    fi
    if [ $INST_H5PY -ne 0 ]
    then
        YT_DEPS+=('h5py')
    fi
    YT_DEPS+=('matplotlib')
    YT_DEPS+=('cython')
    if [ $INST_NOSE -ne 0 ]
    then
        YT_DEPS+=('nose')
    fi
    if [ $INST_SCIPY -ne 0 ]
    then
        YT_DEPS+=('scipy')
    fi
    if [ $INST_ASTROPY -ne 0 ]
    then
        YT_DEPS+=('astropy')
    fi
    YT_DEPS+=('conda-build')
    if [ $INST_PY3 -eq 0 ] && [ $INST_HG -eq 1 ]
    then
       YT_DEPS+=('mercurial')
    fi
    YT_DEPS+=('sympy')

    if [ $INST_NETCDF4 -eq 1 ]
    then
        YT_DEPS+=('netcdf4')   
    fi
    
    log_cmd ${DEST_DIR}/bin/conda update --yes conda

    if [ $INST_GIT -eq 1 ]
    then
        GIT_EXE=${DEST_DIR}/bin/git
    else
        if type -P git &>/dev/null
        then
            GIT_EXE="git"
        else
            echo "Cannot find git. Please install git or set INST_GIT=1."
            do_exit
        fi
    fi

    log_cmd echo "DEPENDENCIES" ${YT_DEPS[@]}
    for YT_DEP in "${YT_DEPS[@]}"; do
        echo "Installing $YT_DEP"
        log_cmd ${DEST_DIR}/bin/conda install -c conda-forge --yes ${YT_DEP}
    done

    if [ $INST_PY3 -eq 1 ] && [ $INST_HG -eq 1 ]
    then
        echo "Installing mercurial"
        log_cmd ${DEST_DIR}/bin/conda create -y -n py27 python=2.7 mercurial
        log_cmd ln -s ${DEST_DIR}/envs/py27/bin/hg ${DEST_DIR}/bin
    fi

    log_cmd ${GIT_EXE} clone https://github.com/yt-project/yt_conda ${DEST_DIR}/src/yt_conda
    
    if [ $INST_EMBREE -eq 1 ]
    then
        
        echo "Installing Embree"
        if [ ! -d ${DEST_DIR}/src ]
        then
            mkdir ${DEST_DIR}/src
        fi
        cd ${DEST_DIR}/src
        ( ${GETFILE} "$EMBREE_URL" 2>&1 ) 1>> ${LOG_FILE} || do_exit
        log_cmd tar xfz ${EMBREE}.tar.gz
        log_cmd mv ${DEST_DIR}/src/${EMBREE}/include/embree2 ${DEST_DIR}/include
        log_cmd mv ${DEST_DIR}/src/${EMBREE}/lib/lib*.* ${DEST_DIR}/lib
        if [ `uname` = "Darwin" ]
        then
            ln -s ${DEST_DIR}/lib/libembree.2.dylib ${DEST_DIR}/lib/libembree.dylib
            install_name_tool -id ${DEST_DIR}/lib/libembree.2.dylib ${DEST_DIR}/lib/libembree.2.dylib
        else
            ln -s ${DEST_DIR}/lib/libembree.so.2 ${DEST_DIR}/lib/libembree.so
        fi
        
        echo "Installing pyembree from source"
        ( ${GETFILE} "$PYEMBREE_URL" 2>&1 ) 1>> ${LOG_FILE} || do_exit
        log_cmd unzip ${DEST_DIR}/src/master.zip
        pushd ${DEST_DIR}/src/pyembree-master &> /dev/null
        log_cmd ${DEST_DIR}/bin/${PYTHON_EXEC} setup.py install build_ext -I${DEST_DIR}/include -L${DEST_DIR}/lib
        popd &> /dev/null
    fi

    if [ $INST_ROCKSTAR -eq 1 ]
    then
        echo "Building Rockstar"
        ( ${GIT_EXE} clone https://github.com/yt-project/rockstar ${DEST_DIR}/src/rockstar/ 2>&1 ) 1>> ${LOG_FILE}
        ROCKSTAR_PACKAGE=$(${DEST_DIR}/bin/conda build ${DEST_DIR}/src/yt_conda/rockstar --output)
        log_cmd ${DEST_DIR}/bin/conda build ${DEST_DIR}/src/yt_conda/rockstar
        log_cmd ${DEST_DIR}/bin/conda install $ROCKSTAR_PACKAGE
        ROCKSTAR_DIR=${DEST_DIR}/src/rockstar
    fi

    # conda doesn't package pyx, so we install manually with pip
    if [ $INST_PYX -eq 1 ]
    then
        if [ $INST_PY3 -eq 1 ]
        then
            log_cmd ${DEST_DIR}/bin/pip install pyx
        else
            log_cmd ${DEST_DIR}/bin/pip install pyx==0.12.1
        fi
    fi

    if [ $INST_YT_SOURCE -eq 0 ]
    then
        echo "Installing yt"
        log_cmd ${DEST_DIR}/bin/conda install -c conda-forge --yes yt
    else
        echo "Building yt from source"
        if [ -z "$YT_DIR" ]
        then
            if [ -e $ORIG_PWD/yt/mods.py ]
            then
                YT_DIR="$ORIG_PWD"
            elif [ -e $ORIG_PWD/../yt/mods.py ]
            then
                YT_DIR=$(dirname $ORIG_PWD)
            else
                YT_DIR="${DEST_DIR}/src/yt-git"
                log_cmd ${GIT_EXE} clone https://github.com/yt-project/yt ${YT_DIR}
                log_cmd ${GIT_EXE} -C ${YT_DIR} checkout ${BRANCH}
            fi
            echo Setting YT_DIR=${YT_DIR}
        else
            if [ ! -e $YT_DIR/.git ]
            then
                echo "$YT_DIR is not a clone of the yt git repository, exiting"
                do_exit
            fi
        fi
        if [ $INST_EMBREE -eq 1 ]
        then
            echo $DEST_DIR > ${YT_DIR}/embree.cfg
        fi
        if [ $INST_ROCKSTAR -eq 1 ]
        then
            echo $ROCKSTAR_DIR > ${YT_DIR}/rockstar.cfg
            ROCKSTAR_LIBRARY_PATH=${DEST_DIR}/lib
        fi
        pushd ${YT_DIR} &> /dev/null
        ( LIBRARY_PATH=$ROCKSTAR_LIBRARY_PATH ${DEST_DIR}/bin/${PYTHON_EXEC} setup.py develop 2>&1) 1>> ${LOG_FILE} || do_exit
        popd &> /dev/null
    fi

    test_install

    echo
    echo
    echo "========================================================================"
    echo
    echo "yt and the Conda system are now installed in $DEST_DIR"
    echo
    echo "To get started with yt, check out the orientation:"
    echo
    echo "    http://yt-project.org/doc/orientation/"
    echo
    echo "For support, see the website and join the mailing list:"
    echo
    echo "    http://yt-project.org/"
    echo "    http://yt-project.org/data/      (Sample data)"
    echo "    http://yt-project.org/doc/       (Docs)"
    echo
    echo "    http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org"
    echo
    echo "You must now prepend the following folder to your PATH environment variable:"
    echo 
    echo "    $DEST_DIR/bin"
    echo
    echo "On Bash-style shells you can copy/paste the following command to "
    echo "temporarily activate the yt installation:"
    echo
    echo "    export PATH=$DEST_DIR/bin:\$PATH"
    echo
    echo "and on csh-style shells:"
    echo
    echo "    setenv PATH $DEST_DIR/bin:\$PATH"
    echo
    echo "You can also update the init file appropriate for your shell"
    echo "(e.g. .bashrc, .bash_profile, .cshrc, or .zshrc) to include"
    echo "the same command."
    echo
    if [ $INST_ROCKSTAR -eq 1 ]
    then
        if [ $MYOS = "Darwin" ]
        then
            LD_NAME="DYLD_LIBRARY_PATH"
        else
            LD_NAME="LD_LIBRARY_PATH"
        fi
        echo
        echo "For rockstar to work, you must also set $LD_NAME:"
        echo
        echo "    export $LD_NAME=$DEST_DIR/lib:\$$LD_NAME"
        echo
        echo "or whichever invocation is appropriate for your shell."
    fi
    echo "========================================================================"
    echo
    echo "Oh, look at me, still talking when there's science to do!"
    echo "Good luck, and email the mailing list if you run into any problems."
fi