Kaiyong Liu
Yongqun "Oliver" He
Sam Smith
2-28-2020
OCE is a formal ontology that represents various chemical elements from Mendeleev's 1871 periodic table.
The Ontology of Chemical Elements (OCE) is an open source community-based ontology in the domain of chemical elements. OCE represents all chemical elements and their attributes, including those attributes defined in the Periodic Table of Chemical Elements.
OWL-DL
OCE: A formal ontology in the area of chemical elements
OCE: Ontology of Chemical Elements
http://creativecommons.org/licenses/by/4.0/
Vision Release: 1.0.29
Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification.
Really of interest to developers only
BFO OWL specification label
BFO OWL specification label
Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2
Person:Alan Ruttenberg
Really of interest to developers only
BFO CLIF specification label
BFO CLIF specification label
example of usage
example of usage
has curation status
has curation status
definition
definition
editor note
editor note
alternative term
alternative term
definition source
definition source
curator note
curator note
imported from
imported from
elucidation
elucidation
has associated axiom(nl)
has associated axiom(nl)
has associated axiom(fol)
has associated axiom(fol)
valence electron configuration
valence electron configuration
has Chinese label
has German label
has French label
has Spanish label
has Italian label
A annotation property that indicates the integer number of protons in the nucleus of an atom.
https://en.wikipedia.org/wiki/Atomic_number
Oliver He, Kaiyong Liu
has atomic number
has_alternative_id
database_cross_reference
has_exact_synonym
has_obo_format_version
has_obo_namespace
has_related_synonym
in_subset
shorthand
label
BFO:0000051
chebi_ontology
has_part
false
has_part
has part
An object property that represents a relation between an atom and a subshell that has the last or final electron of the atom.
has final electron in subshell
has last electron in subshell
Speight, J. . 2017. 'Chapter Two - Inorganic Chemistry.' in, Environmental Inorganic Chemistry for Engineers (Butterworth-Heinemann).
https://en.wikipedia.org/wiki/Electron_shell
Oliver He, Kaiyong Liu
has last electron in
An object property that represents a relation between an atom and the number of electron shell. An electron shell is an orbit followed by electrons around an atom's nucleus. The closest shell to the nucleus is called the "1 shell" (also called the "K shell"), followed by the "2 shell" (or "L shell"), then the "3 shell" (or "M shell"), and so on farther and farther from the nucleus. The shells correspond to the principal quantum numbers (n = 1, 2, 3, 4 ...) or are labeled alphabetically with the letters used in X-ray notation (K, L, M, …).
https://en.wikipedia.org/wiki/Electron_shell
Oliver He, Kaiyong Liu
has electron shell
An object property that represents a relation between an atom and the number of valence electrons. A valence electron is an outer shell electron that is associated with an atom, and that can participate in the formation of a chemical bond if the outer shell is not closed. For a main group element, a valence electron can exist only in the outermost electron shell; in a transition metal, a valence electron can also be in an inner shell.
has valence electron number
https://en.wikipedia.org/wiki/Electron_shell
https://en.wikipedia.org/wiki/Valence_electron
Oliver He, Kaiyong Liu
has valence electron
this apple has quality this red color
a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence
A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist.
has_quality
has quality
RO:0000087
chebi_ontology
has_role
false
false
has_role
has role
entity
Entity
Julius Caesar
Verdi’s Requiem
the Second World War
your body mass index
BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81
Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf
An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])
entity
continuant
Continuant
BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240
Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants
A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])
if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])
if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])
if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])
(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002]
(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001]
(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002]
(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002]
continuant
ic
IndependentContinuant
a chair
a heart
a leg
a molecule
a spatial region
an atom
an orchestra.
an organism
the bottom right portion of a human torso
the interior of your mouth
b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])
For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])
For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])
(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001]
(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002]
(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002]
independent continuant
s-region
SpatialRegion
BFO 2 Reference: Spatial regions do not participate in processes.
Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional.
A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001])
All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001])
(forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001]
(forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001]
spatial region
realizable
RealizableEntity
the disposition of this piece of metal to conduct electricity.
the disposition of your blood to coagulate
the function of your reproductive organs
the role of being a doctor
the role of this boundary to delineate where Utah and Colorado meet
To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])
All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])
(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002]
(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002]
realizable entity
quality
Quality
the ambient temperature of this portion of air
the color of a tomato
the length of the circumference of your waist
the mass of this piece of gold.
the shape of your nose
the shape of your nostril
a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])
If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])
(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001]
(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001]
quality
sdc
SpecificallyDependentContinuant
Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key
of one-sided specifically dependent continuants: the mass of this tomato
of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates.
the disposition of this fish to decay
the function of this heart: to pump blood
the mutual dependence of proton donors and acceptors in chemical reactions [79
the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction
the pink color of a medium rare piece of grilled filet mignon at its center
the role of being a doctor
the shape of this hole.
the smell of this portion of mozzarella
b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])
Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc.
(iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003]
specifically dependent continuant
3d-s-region
ThreeDimensionalSpatialRegion
a cube-shaped region of space
a sphere-shaped region of space,
A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001])
(forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001]
three-dimensional spatial region
material
MaterialEntity
a flame
a forest fire
a human being
a hurricane
a photon
a puff of smoke
a sea wave
a tornado
an aggregate of human beings.
an energy wave
an epidemic
the undetached arm of a human being
BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60
BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity.
BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here.
A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])
Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])
every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])
(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002]
(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002]
(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002]
material entity
immaterial
ImmaterialEntity
BFO 2 Reference: Immaterial entities are divided into two subgroups:boundaries and sites, which bound, or are demarcated in relation, to material entities, and which can thus change location, shape and size and as their material hosts move or change shape or size (for example: your nasal passage; the hold of a ship; the boundary of Wales (which moves with the rotation of the Earth) [38, 7, 10
immaterial entity
Elementary particle not affected by the strong force having a spin 1/2, a negative elementary charge and a rest mass of 0.000548579903(13) u, or 0.51099906(15) MeV.
-1
0.000548579903
0.0
KEGG:C05359
PMID:21614077
Wikipedia:Electron
electron
chebi_ontology
Elektron
beta
beta(-)
beta-particle
e
e(-)
e-
negatron
CHEBI:10545
electron
An atom of an element that exhibits properties that are between those of metals and nonmetals, or that has a mixture of them. The term generally includes boron, silicon, germanium, arsenic, antimony, and tellurium, while carbon, aluminium, selenium, polonium, and astatine are less commonly included.
Wikipedia:Metalloid
chebi_ontology
metalloid
metalloids
CHEBI:137980
metalloid atom
Any main group molecular entity that is gaseous at standard temperature and pressure (STP; 0degreeC and 100 kPa).
Wikipedia:https://en.wikipedia.org/wiki/Gas
chebi_ontology
gas molecular entities
gaseous molecular entities
gaseous molecular entity
CHEBI:138675
gas molecular entity
An iron group element atom that has atomic number 26.
铁
Eisen
fer
hierro
ferro
0
Fe
InChI=1S/Fe
XEEYBQQBJWHFJM-UHFFFAOYSA-N
55.84500
55.93494
[Fe]
CHEBI:13322
CHEBI:24872
CHEBI:5974
CAS:7439-89-6
DrugBank:DB01592
HMDB:HMDB0015531
KEGG:C00023
Reaxys:4122945
WebElements:Fe
iron
chebi_ontology
26Fe
Eisen
Fe
Iron
fer
ferrum
hierro
iron
CHEBI:18248
iron atom
锰
Mangan
manganèse
manganeso
manganese
0
Mn
InChI=1S/Mn
PWHULOQIROXLJO-UHFFFAOYSA-N
54.93805
54.93804
[Mn]
CHEBI:13382
CHEBI:25153
CHEBI:6681
CAS:7439-96-5
KEGG:C00034
WebElements:Mn
manganese
chebi_ontology
25Mn
Mangan
Manganese
Mn
manganese
manganeso
manganum
CHEBI:18291
manganese atom
alkaline earth metals
chebi_ontology
Erdalkalimetall
Erdalkalimetalle
alkaline earth metal
alkaline-earth metal
alkaline-earth metals
metal alcalino-terreux
metal alcalinoterreo
metales alcalinoterreos
metaux alcalino-terreux
CHEBI:22313
alkaline earth metal atom
alkali metals
chebi_ontology
Alkalimetall
Alkalimetalle
alkali metal
metal alcalin
metal alcalino
metales alcalinos
metaux alcalins
CHEBI:22314
alkali metal atom
溴
Brom
brome
bromo
bromo
0
Br
InChI=1S/Br
WKBOTKDWSSQWDR-UHFFFAOYSA-N
79.90400
78.91834
[Br]
WebElements:Br
bromine
chebi_ontology
35Br
Br
Brom
brome
bromine
bromo
bromum
CHEBI:22927
bromine atom
镉
Kadmium
cadmium
cadmio
cadmio
0
Cd
InChI=1S/Cd
BDOSMKKIYDKNTQ-UHFFFAOYSA-N
112.41100
113.90336
[Cd]
CAS:7440-43-9
KEGG:C01413
WebElements:Cd
cadmium
chebi_ontology
48Cd
Cd
Kadmium
cadmio
cadmium
CHEBI:22977
cadmium atom
4
2
钙
Kalzium
calcium
calcio
calcio
0
Ca
InChI=1S/Ca
OYPRJOBELJOOCE-UHFFFAOYSA-N
40.07800
39.96259
[Ca]
CAS:7440-70-2
DrugBank:DB01373
KEGG:C00076
WebElements:Ca
calcium
chebi_ontology
20Ca
Ca
Calcium
Kalzium
calcio
calcium
CHEBI:22984
calcium atom
氯
Chlor
chlore
cloro
cloro
0
Cl
InChI=1S/Cl
ZAMOUSCENKQFHK-UHFFFAOYSA-N
35.45270
34.96885
[Cl]
WebElements:Cl
chlorine
chebi_ontology
17Cl
Chlor
Cl
chlore
chlorine
chlorum
cloro
CHEBI:23116
chlorine atom
Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity.
molecular entity
chebi_ontology
entidad molecular
entidades moleculares
entite moleculaire
molecular entities
molekulare Entitaet
CHEBI:23367
molecular entity
氟
Fluor
fluor
flúor
fluoro
0
F
InChI=1S/F
YCKRFDGAMUMZLT-UHFFFAOYSA-N
18.99840
18.99840
[F]
CAS:7782-41-4
WebElements:F
fluorine
chebi_ontology
9F
F
Fluor
fluor
fluorine
fluorum
CHEBI:24061
fluorine atom
A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.
chemical entity
chebi_ontology
CHEBI:24431
chemical entity
A role played by the molecular entity or part thereof within a biological context.
chebi_ontology
biological function
CHEBI:24432
biological role
halogen
halogens
chebi_ontology
Halogene
group 17 elements
group VII elements
halogene
halogenes
halogeno
halogenos
CHEBI:24473
halogen
A molecular entity that contains no carbon.
chebi_ontology
anorganische Verbindungen
inorganic compounds
inorganic entity
inorganic molecular entities
inorganics
CHEBI:24835
inorganic molecular entity
Chemical element with atomic number 53.
碘
Iod (Jod)
iode
yodo
iodio
0
I
InChI=1S/I
ZCYVEMRRCGMTRW-UHFFFAOYSA-N
126.90447
126.90447
[I]
WebElements:I
iodine
chebi_ontology
53I
I
Iod
J
Jod
iode
iodine
iodium
yodo
CHEBI:24859
iodine atom
铅
Blei
plomb
plomo
piombo
0
Pb
InChI=1S/Pb
WABPQHHGFIMREM-UHFFFAOYSA-N
207.20000
207.97665
[Pb]
KEGG:C06696
WebElements:Pb
lead
chebi_ontology
82Pb
Blei
Pb
lead
plomb
plomo
plumbum
CHEBI:25016
lead atom
镁
Magnesium
magnésium
magnesio
magnesio
0
Mg
InChI=1S/Mg
FYYHWMGAXLPEAU-UHFFFAOYSA-N
24.30500
23.98504
[Mg]
CAS:7439-95-4
DrugBank:DB01378
Gmelin:16207
KEGG:C00305
WebElements:Mg
magnesium
chebi_ontology
12Mg
Magnesium
Mg
magnesio
magnesium
CHEBI:25107
magnesium atom
汞
Quecksilber
mercure
mercurio
mercurio
0
Hg
InChI=1S/Hg
QSHDDOUJBYECFT-UHFFFAOYSA-N
200.59000
201.97064
[Hg]
CAS:7439-97-6
WebElements:Hg
mercury
chebi_ontology
80Hg
Hg
Quecksilber
azogue
hydrargyrum
liquid silver
mercure
mercurio
mercury
quicksilver
CHEBI:25195
mercury atom
Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
CHEBI:26619
CHEBI:35220
metabolite
chebi_ontology
metabolites
primary metabolites
secondary metabolites
CHEBI:25212
metabolite
氮
Stickstoff
azote
nitrógeno
azoto
0
N
14.007
14.00307
WebElements:N
nitrogen
chebi_ontology
7N
N
Stickstoff
azote
nitrogen
nitrogeno
CHEBI:25555
nitrogen atom
nonmetal
chebi_ontology
Nichtmetall
Nichtmetalle
no metal
no metales
non-metal
non-metaux
nonmetal
nonmetals
CHEBI:25585
nonmetal atom
氧
Sauerstoff
oxygène
oxígeno
ossigeno
0
O
InChI=1S/O
QVGXLLKOCUKJST-UHFFFAOYSA-N
15.99940
15.99491
[O]
KEGG:C00007
WebElements:O
oxygen
chebi_ontology
8O
O
Sauerstoff
oxigeno
oxygen
oxygene
CHEBI:25805
oxygen atom
钾
Kalium
potassium
potasio
potassio
0
K
InChI=1S/K
ZLMJMSJWJFRBEC-UHFFFAOYSA-N
39.09830
38.96371
[K]
CAS:7440-09-7
DrugBank:DB01345
KEGG:C00238
WebElements:K
potassium
chebi_ontology
19K
K
Kalium
kalium
potasio
potassium
CHEBI:26216
potassium atom
1
1
3ds1
3s1
钠
Natrium
sodium
sodio
sodio
0
Na
InChI=1S/Na
KEAYESYHFKHZAL-UHFFFAOYSA-N
22.98977
22.98977
[Na]
CAS:7440-23-5
Gmelin:16221
KEGG:C01330
WebElements:Na
sodium
chebi_ontology
11Na
Na
Natrium
natrium
sodio
sodium
CHEBI:26708
alternative term:IA group
sodium atom
硫
Schwefel
soufre
azufre
zolfo
0
S
InChI=1S/S
NINIDFKCEFEMDL-UHFFFAOYSA-N
32.06600
31.97207
[S]
CAS:7704-34-9
KEGG:C00087
KEGG:D06527
PPDB:605
WebElements:S
sulfur
chebi_ontology
16S
Elemental sulfur
S
Schwefel
azufre
soufre
sulfur
sulphur
theion
CHEBI:26833
sulfur atom
锡
Zinn
Étain
estaño
stagno
0
Sn
InChI=1S/Sn
ATJFFYVFTNAWJD-UHFFFAOYSA-N
118.71000
119.90220
[Sn]
CAS:7440-31-5
UM-BBD_compID:c0585
WebElements:Sn
tin
chebi_ontology
50Sn
Sn
Zinn
estano
etain
stannum
tin
CHEBI:27007
tin atom
Any nutrient required in small quantities by organisms throughout their life in order to orchestrate a range of physiological functions.
Wikipedia:Micronutrient
chebi_ontology
micronutrients
trace elements
CHEBI:27027
micronutrient
An element whose atom has an incomplete d sub-shell, or which can give rise to cations with an incomplete d sub-shell.
transition element
chebi_ontology
Uebergangselement
Uebergangsmetalle
metal de transicion
metal de transition
metales de transicion
metaux de transition
transition element
transition elements
transition metal
transition metals
CHEBI:27081
transition element atom
铀
Uran
uranium
uranio
uranio
0
U
InChI=1S/U
JFALSRSLKYAFGM-UHFFFAOYSA-N
238.02890
238.05079
[U]
CAS:7440-61-1
WebElements:U
uranium
chebi_ontology
92U
U
Uran
uranio
uranium
CHEBI:27214
uranium atom
锌
Zink
zinc
zinc
zinco
0
Zn
InChI=1S/Zn
HCHKCACWOHOZIP-UHFFFAOYSA-N
65.39000
63.92914
[Zn]
CAS:7440-66-6
Gmelin:16321
KEGG:C00038
PDBeChem:ZN
WebElements:Zn
zinc
chebi_ontology
30Zn
Zink
Zn
Zn(II)
Zn2+
cinc
zinc
zincum
CHEBI:27363
zinc atom
硼
Bor
bore
boro
boro
0
B
InChI=1S/B
ZOXJGFHDIHLPTG-UHFFFAOYSA-N
10.81100
11.00930
[B]
CHEBI:22915
CHEBI:3152
CAS:7440-42-8
KEGG:C06266
WebElements:B
boron
chebi_ontology
5B
B
Bor
Boron
boracium
bore
boro
boron
CHEBI:27560
boron atom
砷
Arsen
arsenic
arsénico
arsenico
0
As
InChI=1S/As
RQNWIZPPADIBDY-UHFFFAOYSA-N
74.92160
74.92159
[As]
CHEBI:22630
CHEBI:2845
CAS:7440-38-2
KEGG:C06269
WebElements:As
arsenic
chebi_ontology
33As
Arsen
Arsenic
As
arsenic
arsenico
arsenicum
CHEBI:27563
arsenic atom
硒
Selen
sélénium
selenio
selenio
0
Se
InChI=1S/Se
BUGBHKTXTAQXES-UHFFFAOYSA-N
78.96000
79.91652
[Se]
CHEBI:26627
CHEBI:9091
CAS:7782-49-2
KEGG:C01529
WebElements:Se
selenium
chebi_ontology
34Se
Se
Selen
Selenium
selenio
selenium
CHEBI:27568
selenium atom
硅
Silizium
silicium
silicio
silicio
0
Si
InChI=1S/Si
XUIMIQQOPSSXEZ-UHFFFAOYSA-N
28.08550
27.97693
[Si]
CHEBI:26676
CHEBI:9140
CAS:7440-21-3
KEGG:C06263
WebElements:Si
silicon
chebi_ontology
14Si
Si
Silicon
Silizium
silicio
silicium
silicon
CHEBI:27573
silicon atom
碳
Kohlenlstoff
carbone
carbono
carbonio
0
C
InChI=1S/C
OKTJSMMVPCPJKN-UHFFFAOYSA-N
12.01070
12.00000
[C]
CHEBI:23009
CHEBI:3399
CAS:7440-44-0
KEGG:C06265
WebElements:C
carbon
chebi_ontology
6C
C
Carbon
Kohlenstoff
carbon
carbone
carbonium
carbono
CHEBI:27594
carbon atom
A cobalt group element atom that has atomic number 27.
钴
Kobalt
cobalt
cobalto
cobalto
0
Co
InChI=1S/Co
GUTLYIVDDKVIGB-UHFFFAOYSA-N
58.93320
58.93319
[Co]
CHEBI:23335
CHEBI:3788
CAS:7440-48-4
KEGG:C00175
KEGG:C19171
PDBeChem:3CO
WebElements:Co
cobalt
chebi_ontology
27Co
Co
Cobalt
Kobalt
cobalt
cobalto
cobaltum
CHEBI:27638
cobalt atom
4
5
3d4 S2
钒
Vanadium
vanadium
vanadio
vanadio
0
V
InChI=1S/V
LEONUFNNVUYDNQ-UHFFFAOYSA-N
50.94150
50.94396
[V]
CHEBI:27274
CHEBI:9930
CAS:7440-62-2
KEGG:C06267
WebElements:V
vanadium
chebi_ontology
23V
V
Vanadium
vanadio
vanadium
CHEBI:27698
alternative term:VB group
vanadium atom
钨
Wolfram
tungstène
wolframio or tungsteno
tungsteno
0
W
InChI=1S/W
WFKWXMTUELFFGS-UHFFFAOYSA-N
183.84000
183.95093
[W]
CHEBI:27170
CHEBI:9779
CAS:7440-33-7
Gmelin:16317
KEGG:C00753
PDBeChem:W
WebElements:W
Tungsten
tungsten
wolfram
chebi_ontology
74W
W
Wolfram
tungsten atom
tungstene
tungsteno
volframio
wolframio
wolframium
CHEBI:27998
tungsten
A chromium group element atom that has atomic number 24.
铬
Chrom
chrome
cromo
cromo
0
Cr
InChI=1S/Cr
VYZAMTAEIAYCRO-UHFFFAOYSA-N
51.99610
51.94051
[Cr]
CHEBI:23235
CHEBI:3678
CAS:7440-47-3
KEGG:C06268
WebElements:Cr
chromium
chebi_ontology
24Cr
Chrom
Chromium
Cr
chrome
chromium
cromo
CHEBI:28073
chromium atom
Chemical element (nickel group element atom) with atomic number 28.
镍
Nickel
nickel
níquel
nichelio
0
Ni
InChI=1S/Ni
PXHVJJICTQNCMI-UHFFFAOYSA-N
58.69340
57.93534
[Ni]
CHEBI:25515
CHEBI:7552
CAS:7440-02-0
Gmelin:16229
KEGG:C00291
PMID:12756270
PMID:14634084
PMID:14734778
PMID:15165199
PMID:19828094
PMID:20477134
PMID:22762130
PMID:23142754
PMID:23317102
PMID:23692032
PMID:23692035
PMID:23723488
PMID:23834453
PMID:23857010
PMID:23895079
PMID:23909687
PMID:9060994
PMID:9886425
Reaxys:4122946
WebElements:Ni
Wikipedia:Nickel
nickel
chebi_ontology
28Ni
Ni
Nickel
Raney alloy
niccolum
nickel
niquel
CHEBI:28112
nickel atom
磷
Phosphor
phosphore
fósforo
fosforo
0
P
InChI=1S/P
OAICVXFJPJFONN-UHFFFAOYSA-N
30.97376
30.97376
[P]
CHEBI:26080
CHEBI:8168
CAS:7723-14-0
Gmelin:16235
KEGG:C06262
WebElements:P
phosphorus
chebi_ontology
15P
P
Phosphor
Phosphorus
fosforo
phosphore
phosphorus
CHEBI:28659
phosphorus atom
钼
Molybdän
molybdène
molibdeno
molibdeno
0
Mo
InChI=1S/Mo
ZOKXTWBITQBERF-UHFFFAOYSA-N
95.94000
97.90541
[Mo]
CHEBI:25369
CHEBI:49750
CHEBI:6968
CAS:7439-98-7
Gmelin:16205
KEGG:C00150
WebElements:Mo
molybdenum
chebi_ontology
42Mo
Mo
Molybdaen
Molybdenum
molibdeno
molybdene
molybdenum
CHEBI:28685
molybdenum atom
铜
Kupfer
cuivre
cobre
rame
0
Cu
InChI=1S/Cu
RYGMFSIKBFXOCR-UHFFFAOYSA-N
63.54600
62.92960
[Cu]
CHEBI:23376
CHEBI:3874
CAS:7440-50-8
Gmelin:16269
KEGG:C00070
WebElements:Cu
copper
chebi_ontology
29Cu
Copper
Cu
Kupfer
cobre
copper
cuivre
cuprum
CHEBI:28694
copper atom
3
13
铝
Aluminium
aluminium
aluminio
alluminio
0
Al
InChI=1S/Al
XAGFODPZIPBFFR-UHFFFAOYSA-N
26.98154
26.98154
[Al]
CHEBI:22471
CHEBI:2616
CAS:7429-90-5
DrugBank:DB01370
Gmelin:16248
KEGG:C06264
WebElements:Al
aluminium
chebi_ontology
13Al
Al
Aluminium
aluminio
aluminium
aluminum
CHEBI:28984
aluminium atom
金
Gold
or
oro
oro
0
Au
InChI=1S/Au
PCHJSUWPFVWCPO-UHFFFAOYSA-N
196.96655
196.96657
[Au]
CAS:7440-57-5
WebElements:Au
gold
chebi_ontology
79Au
Au
Gold
aurum
gold
or
oro
CHEBI:29287
gold atom
锂
Lithium
lithium
litio
litio
0
Li
InChI=1S/Li
WHXSMMKQMYFTQS-UHFFFAOYSA-N
6.94100
7.01600
[Li]
CAS:7439-93-2
WebElements:Li
lithium
chebi_ontology
3Li
Li
Lithium
lithium
litio
CHEBI:30145
lithium atom
1
氦
Helium
hélium
helio
elio
0
He
InChI=1S/He
SWQJXJOGLNCZEY-UHFFFAOYSA-N
4.00260
4.00260
[He]
CAS:7440-59-7
Drug_Central:4262
Gmelin:16294
WebElements:He
helium
chebi_ontology
2He
He
Helium
helio
helium
CHEBI:30217
helium atom
砹
Astat
astate
astato
astato
0
At
InChI=1S/At
RYXHOMYVWAEKHL-UHFFFAOYSA-N
210.00000
210.00000
[At]
CAS:7440-68-8
Gmelin:40440
WebElements:At
astatine
chebi_ontology
85At
Astat
At
astate
astatine
astato
CHEBI:30415
astatine atom
A metallic element first identified and named from the brilliant indigo (Latin indicum) blue line in its flame spectrum.
铟
Indium
indium
indio
indio
0
In
InChI=1S/In
APFVFJFRJDLVQX-UHFFFAOYSA-N
114.81800
114.90388
[In]
CAS:7440-74-6
Gmelin:16297
WebElements:In
indium
chebi_ontology
49In
In
Indium
indio
indium
CHEBI:30430
indium atom
A metallic element first identified and named from the brilliant green line in its flame spectrum (from Greek thetaalphalambdalambdaomicronsigma, a green shoot).
铊
Thallium
thallium
talio
tallio
0
Tl
InChI=1S/Tl
BKVIYDNLLOSFOA-UHFFFAOYSA-N
204.38330
204.97443
[Tl]
CAS:7440-28-0
Gmelin:16308
WebElements:Tl
thallium
chebi_ontology
81Tl
Tl
talio
CHEBI:30440
thallium
锗
Germanium
germanium
germanio
germanio
0
Ge
InChI=1S/Ge
GNPVGFCGXDBREM-UHFFFAOYSA-N
72.61000
73.92118
[Ge]
CAS:7440-56-4
WebElements:Ge
germanium
chebi_ontology
32Ge
Ge
germanio
germanium
CHEBI:30441
germanium atom
碲
Tellur
tellure
teluro
tellurio
0
Te
InChI=1S/Te
PORWMNRCUJJQNO-UHFFFAOYSA-N
127.60000
129.90622
[Te]
CAS:13494-80-9
Gmelin:16309
WebElements:Te
tellurium
chebi_ontology
52Te
Te
Tellur
tellure
tellurium
teluro
CHEBI:30452
tellurium atom
Alkaline earth metal atom with atomic number 4.
铍
Beryllium
béryllium
berilio
berillio
0
Be
InChI=1S/Be
ATBAMAFKBVZNFJ-UHFFFAOYSA-N
9.01218
9.01218
[Be]
CAS:7440-41-7
Gmelin:16265
PMID:10858219
PMID:11897645
PMID:14643414
PMID:16951350
PMID:18250483
PMID:18768897
PMID:24912188
Reaxys:14617151
WebElements:Be
beryllium
chebi_ontology
4Be
Be
Beryllium
berilio
beryllium
CHEBI:30501
beryllium atom
银
Silber
argent
plata
argento
0
Ag
InChI=1S/Ag
BQCADISMDOOEFD-UHFFFAOYSA-N
107.86820
106.90509
[Ag]
CAS:7440-22-4
WebElements:Ag
silver
chebi_ontology
47Ag
Ag
Silber
argent
argentum
plata
silver
CHEBI:30512
silver atom
锑
Antimon
antimoine
antimonio
antimonio
0
Sb
InChI=1S/Sb
WATWJIUSRGPENY-UHFFFAOYSA-N
121.76000
120.90381
[Sb]
WebElements:Sb
antimony
chebi_ontology
51Sb
Antimon
Sb
antimoine
antimonio
antimony
stibium
CHEBI:30513
antimony atom
铯
Zäsium
césium
cesio
cesio
0
Cs
InChI=1S/Cs
TVFDJXOCXUVLDH-UHFFFAOYSA-N
132.90545
132.90545
[Cs]
WebElements:Cs
caesium
chebi_ontology
55Cs
Caesium
Cs
Zaesium
caesium
cesio
cesium
CHEBI:30514
caesium atom
钌
Ruthenium
ruthénium
rutenio
rutenio
0
Ru
InChI=1S/Ru
KJTLSVCANCCWHF-UHFFFAOYSA-N
101.07000
101.90434
[Ru]
CAS:7440-18-8
WebElements:Ru
ruthenium
chebi_ontology
44Ru
Ru
Ruthenium
rutenio
ruthenium
CHEBI:30682
ruthenium atom
锇
Osmium
osmium
osmio
osmio
0
Os
InChI=1S/Os
SYQBFIAQOQZEGI-UHFFFAOYSA-N
190.23000
191.96148
[Os]
CAS:7440-04-2
Gmelin:16234
WebElements:Os
osmium
chebi_ontology
76Os
Os
osmio
osmium
CHEBI:30687
osmium atom
钡
Barium
baryum
bario
bario
0
Ba
InChI=1S/Ba
DSAJWYNOEDNPEQ-UHFFFAOYSA-N
137.32700
137.90525
[Ba]
WebElements:Ba
barium
chebi_ontology
56Ba
Ba
Barium
bario
barium
baryum
CHEBI:32594
barium atom
铕
Europium
europium
europio
europio
0
Eu
InChI=1S/Eu
OGPBJKLSAFTDLK-UHFFFAOYSA-N
151.96400
152.92124
[Eu]
CAS:7440-53-1
Gmelin:16279
WebElements:Eu
europium
chebi_ontology
63Eu
Eu
europio
europium
CHEBI:32999
europium atom
Intended use of the molecular entity or part thereof by humans.
chebi_ontology
CHEBI:33232
application
A particle not known to have substructure.
elementary particle
chebi_ontology
elementary particles
CHEBI:33233
fundamental particle
A chemical entity constituting the smallest component of an element having the chemical properties of the element.
chemical entity
CHEBI:22671
CHEBI:23907
atom
chebi_ontology
atome
atomo
atoms
atomus
element
elements
CHEBI:33250
A chemical element is a species of atom having the same number of protons in their atomic nuclei (that is, the same atomic number, or Z). For example, the atomic number of oxygen is 8, so the element oxygen describes all atoms which have 8 protons. At the level of ontology, the chemical element is equivalent to the atom at the class level. - Oliver He, Kaiyong Liu. Ref: https://en.wikipedia.org/wiki/Chemical_element
atom
A nucleus is the positively charged central portion of an atom, excluding the orbital electrons.
nucleus
chebi_ontology
Atomkern
Kern
noyau
noyau atomique
nuclei
nucleo
nucleo atomico
nucleus atomi
CHEBI:33252
atomic nucleus
Heavy nuclear particle: proton or neutron.
nucleon
chebi_ontology
Nukleon
Nukleonen
nucleons
CHEBI:33253
nucleon
A nutrient is a food component that an organism uses to survive and grow.
chebi_ontology
nutrients
CHEBI:33284
nutrient
Any p-block element atom that is in group 15 of the periodic table: nitrogen, phosphorus, arsenic, antimony and bismuth.
pnictogens
chebi_ontology
group 15 elements
group V elements
nitrogenoideos
nitrogenoides
pnictogene
pnictogenes
CHEBI:33300
pnictogen
铋
Wismut
bismuth
bismuto
bismuto
0
Bi
InChI=1S/Bi
JCXGWMGPZLAOME-UHFFFAOYSA-N
208.98038
208.98040
[Bi]
CAS:7440-69-9
WebElements:Bi
bismuth
chebi_ontology
83Bi
Bi
Bismut
Wismut
bismuth
bismuto
CHEBI:33301
bismuth atom
Any p-block element belonging to the group 16 family of the periodic table.
PMID:17084588
chalcogen
chalcogens
chebi_ontology
Chalkogen
Chalkogene
anfigeno
anfigenos
calcogeno
calcogenos
chalcogene
chalcogenes
group 16 elements
group VI elements
CHEBI:33303
chalcogen
group 14 elements
chebi_ontology
carbon group element
carbon group elements
carbonoides
cristallogene
cristallogenes
group IV elements
CHEBI:33306
carbon group element atom
noble gas
noble gases
chebi_ontology
Edelgas
Edelgase
gas noble
gases nobles
gaz noble
gaz nobles
group 18 elements
group VIII elements
inert gases
noble gas
rare gases
CHEBI:33309
noble gas atom
氖
Neon
néon
neón
neon
0
Ne
InChI=1S/Ne
GKAOGPIIYCISHV-UHFFFAOYSA-N
20.17970
19.99244
[Ne]
CAS:7440-01-9
WebElements:Ne
neon
chebi_ontology
10Ne
Ne
Neon
neon
CHEBI:33310
neon atom
A radioactive metallic element discovered in 1898 by Marie Sklodowska Curie and named after her home country, Poland (Latin Polonia).
钋
Polonium
polonium
polonio
polonio
0
Po
InChI=1S/Po
HZEBHPIOVYHPMT-UHFFFAOYSA-N
209.00000
209.00000
[Po]
CAS:7440-08-6
Gmelin:40435
WebElements:Po
polonium
chebi_ontology
84Po
Po
polonio
polonium
CHEBI:33313
polonium atom
氡
Radon
radon
radón
radon
0
Rn
InChI=1S/Rn
SYUHGPGVQRZVTB-UHFFFAOYSA-N
222.00000
222.00000
[Rn]
CAS:10043-92-2
Gmelin:16242
WebElements:Rn
radon
chebi_ontology
86Rn
Rn
niton
radium emanation
radon
CHEBI:33314
radon atom
group 13 elements
chebi_ontology
Element der Borgruppe
boron group element
boron group elements
group III elements
CHEBI:33317
boron group element atom
An atom belonging to one of the main groups (found in the s- and p- blocks) of the periodic table.
main group elements
chebi_ontology
Hauptgruppenelement
Hauptgruppenelemente
main group element
CHEBI:33318
main group element atom
lanthanoids
chebi_ontology
Lanthanoid
Lanthanoide
Lanthanoidengruppe
Lanthanoidenreiche
Ln
lanthanide
lanthanides
lanthanoid
CHEBI:33319
lanthanoid atom
actinoids
chebi_ontology
Actinoid
Actinoide
Actinoidenelemente
Actinoidengruppe
Aktinoide
Aktinoidenelemente
An
actinide
actinides
actinoid
CHEBI:33320
actinoid atom
rare earth metals
chebi_ontology
rare earth metal
CHEBI:33321
rare earth metal atom
铷
Rubidium
rubidium
rubidio
rubidio
0
Rb
InChI=1S/Rb
IGLNJRXAVVLDKE-UHFFFAOYSA-N
85.46780
84.91179
[Rb]
CAS:7440-17-7
DrugBank:DB06749
Gmelin:16244
WebElements:Rb
rubidium
chebi_ontology
37Rb
Rb
rubidio
rubidium
CHEBI:33322
rubidium atom
钫
Franzium
francium
francio
francio
0
Fr
InChI=1S/Fr
KLMCZVJOEAUDNE-UHFFFAOYSA-N
223.00000
223.00000
[Fr]
CAS:7440-73-5
Gmelin:40458
WebElements:Fr
francium
chebi_ontology
87Fr
Fr
Franzium
francio
francium
CHEBI:33323
francium atom
锶
Strontium
strontium
estroncio
stronzio
0
Sr
InChI=1S/Sr
CIOAGBVUUVVLOB-UHFFFAOYSA-N
87.62000
87.90561
[Sr]
CAS:7440-24-6
WebElements:Sr
strontium
chebi_ontology
38Sr
Sr
estroncio
strontium
CHEBI:33324
strontium atom
镭
Radium
radium
radio
radio
0
Ra
InChI=1S/Ra
HCWPIIXVSYCSAN-UHFFFAOYSA-N
226.00000
226.00000
[Ra]
CAS:7440-14-4
WebElements:Ra
radium
chebi_ontology
88Ra
Ra
radio
radium
CHEBI:33325
radium atom
钪
Skandium
scandium
escandio
scandio
0
Sc
InChI=1S/Sc
SIXSYDAISGFNSX-UHFFFAOYSA-N
44.95591
44.95591
[Sc]
CAS:7440-20-2
WebElements:Sc
scandium
chebi_ontology
21Sc
Sc
Skandium
escandio
scandium
CHEBI:33330
scandium atom
钇
Yttrium
yttrium
itrio
ittrio
0
Y
InChI=1S/Y
VWQVUPCCIRVNHF-UHFFFAOYSA-N
88.90585
88.90584
[Y]
CAS:7440-65-5
Gmelin:16319
WebElements:Y
yttrium
chebi_ontology
39Y
Y
ytrio
yttrium
CHEBI:33331
yttrium atom
group 3 elements
chebi_ontology
scandium group element
scandium group elements
CHEBI:33335
scandium group element atom
镧
Lanthan
lanthane
lantano
lantanio
0
La
InChI=1S/La
FZLIPJUXYLNCLC-UHFFFAOYSA-N
138.90550
138.90636
[La]
CAS:7439-91-0
Gmelin:16203
WebElements:La
lanthanum
chebi_ontology
57La
La
Lanthan
lantano
lanthane
lanthanum
CHEBI:33336
lanthanum atom
锕
Aktinium
actinium
actinio
attinio
0
Ac
InChI=1S/Ac
QQINRWTZWGJFDB-UHFFFAOYSA-N
227.00000
227.00000
[Ac]
CAS:7440-34-8
WebElements:Ac
actinium
chebi_ontology
89Ac
Ac
Aktinium
actinio
actinium
CHEBI:33337
actinium atom
group 12 elements
chebi_ontology
zinc group element
zinc group elements
CHEBI:33340
zinc group element atom
钛
Titan
titane
titanio
titanio
0
Ti
InChI=1S/Ti
RTAQQCXQSZGOHL-UHFFFAOYSA-N
47.86700
47.94794
[Ti]
CAS:7440-32-6
WebElements:Ti
titanium
chebi_ontology
22Ti
Ti
Titan
titane
titanio
titanium
CHEBI:33341
titanium atom
锆
Zirkonium
zirconium
circonio
zirconio
0
Zr
InChI=1S/Zr
QCWXUUIWCKQGHC-UHFFFAOYSA-N
91.22400
89.90470
[Zr]
CAS:7440-67-7
WebElements:Zr
zirconium
chebi_ontology
40Zr
Zirkonium
Zr
circonio
zirconio
zirconium
CHEBI:33342
zirconium atom
铪
Hafnium
hafnium
hafnio
hafnio
0
Hf
InChI=1S/Hf
VBJZVLUMGGDVMO-UHFFFAOYSA-N
178.49000
179.94656
[Hf]
CAS:7440-58-6
WebElements:Hf
hafnium
chebi_ontology
72Hf
Hf
hafnio
hafnium
CHEBI:33343
hafnium atom
铌
Niob
niobium
niobio
niobio
0
Nb
InChI=1S/Nb
GUCVJGMIXFAOAE-UHFFFAOYSA-N
92.90638
92.90637
[Nb]
CAS:7440-03-1
WebElements:Nb
niobium
chebi_ontology
41Nb
Nb
Niob
columbio
columbium
niobio
niobium
CHEBI:33344
niobium atom
group 4 elements
chebi_ontology
titanium group element
titanium group elements
CHEBI:33345
titanium group element atom
钅卢
Rutherfordium
rutherfordium
ruterfordio
rutherfordio
0
Rf
InChI=1S/Rf
YGPLJIIQQIDVFJ-UHFFFAOYSA-N
261.00000
267.00000
[Rf]
WebElements:Rf
rutherfordium
chebi_ontology
104Rf
Ku
Rf
Unq
kurchatovium
rutherfordio
rutherfordium
unnilquadium
CHEBI:33346
rutherfordium atom
group 5 elements
chebi_ontology
vanadium group element
vanadium group elements
CHEBI:33347
vanadium group element atom
钽
Tantal
tantale
tántalo
tantalio
0
Ta
InChI=1S/Ta
GUVRBAGPIYLISA-UHFFFAOYSA-N
180.94790
180.94800
[Ta]
CAS:7440-25-7
WebElements:Ta
tantalum
chebi_ontology
73Ta
Ta
Tantal
tantale
tantalo
tantalum
CHEBI:33348
tantalum atom
钅杜
Dubnium
dubnium
dubnio
dubnio
0
Db
262.00000
270.00000
[Db]
WebElements:Db
dubnium
chebi_ontology
105Db
Db
Ha
Ns
Unp
dubnio
dubnium
hahnium
nielsbohrium
unnilpentium
CHEBI:33349
dubnium atom
group 6 elements
chebi_ontology
chromium group element
chromium group elements
CHEBI:33350
chromium group element atom
钅喜
Seaborgium
seaborgium
seaborgio
seaborgio
0
Sg
263.00000
271.00000
[Sg]
WebElements:Sg
seaborgium
chebi_ontology
106Sg
Sg
Unh
seaborgio
seaborgium
unnilhexium
CHEBI:33351
seaborgium atom
group 7 elements
chebi_ontology
manganese group element
manganese group elements
CHEBI:33352
manganese group element atom
锝
Technetium
technétium
tecnecio
tecnezio
0
Tc
InChI=1S/Tc
GKLVYJBZJHMRIY-UHFFFAOYSA-N
98.00000
97.00000
[Tc]
CAS:7440-26-8
Gmelin:16310
WebElements:Tc
technetium
chebi_ontology
43Tc
Tc
Technetium
technetium
tecnecio
CHEBI:33353
technetium atom
钅波
Bohrium
bohrium
bohrio
bohrio
0
Bh
264.00000
270.00000
[Bh]
WebElements:Bh
bohrium
chebi_ontology
107Bh
Bh
Ns
Uns
bohrio
bohrium
nielsbohrium
unnilseptium
CHEBI:33355
bohrium atom
group 8 elements
chebi_ontology
iron group element
iron group elements
CHEBI:33356
iron group element atom
钅黑
Hassium
hassium
hassio
hassio
0
Hs
265.00000
277.00000
[Hs]
WebElements:Hs
hassium
chebi_ontology
108Hs
Ha
Hs
Uno
hahnium
hassio
hassium
unniloctium
CHEBI:33357
hassium atom
group 9 elements
chebi_ontology
cobalt group element
cobalt group elements
CHEBI:33358
cobalt group element atom
A cobalt group element atom of atomic number 45.
铑
Rhodium
rhodium
rodio
rodio
0
Rh
InChI=1S/Rh
MHOVAHRLVXNVSD-UHFFFAOYSA-N
102.90550
102.90550
[Rh]
CAS:7440-16-6
PMID:2936374
WebElements:Rh
Wikipedia:Rhodium
rhodium
chebi_ontology
45Rh
Rh
rhodium
rodio
CHEBI:33359
rhodium atom
钅麦
Meitnerium
meitnérium
meitnerio
meitnerio
0
Mt
0.00000
0.00000
[Mt]
WebElements:Mt
meitnerium
chebi_ontology
109Mt
Mt
Une
meitnerio
meitnerium
unnilennium
CHEBI:33361
meitnerium atom
group 10 elements
chebi_ontology
nickel group element
nickel group elements
CHEBI:33362
nickel group element atom
Chemical element (nickel group element atom) with atomic number 46.
钯
Palladium
palladium
paladio
palladio
0
Pd
InChI=1S/Pd
KDLHZDBZIXYQEI-UHFFFAOYSA-N
106.42000
105.90348
[Pd]
CAS:7440-05-3
PMID:25097477
Reaxys:4937491
WebElements:Pd
Wikipedia:Palladium
palladium
chebi_ontology
46Pd
Pd
paladio
CHEBI:33363
palladium
铂
Platin
platine
platino
platino
0
Pt
InChI=1S/Pt
BASFCYQUMIYNBI-UHFFFAOYSA-N
195.078
194.96479
[Pt]
CAS:7440-06-4
WebElements:Pt
platinum
chebi_ontology
78Pt
Platin
Pt
platine
platino
CHEBI:33364
platinum
chebi_ontology
PGM
Platinmetalle
Platinoide
platinoid
platinum group metal
platinum group metals
platinum metals
CHEBI:33365
platinum group metal atom
group 11 elements
chebi_ontology
coinage metals
copper group element
copper group elements
CHEBI:33366
copper group element atom
钅达
Darmstadtium
darmstadtium
darmstadtio
darmstadtio
0
Ds
0.00000
0.00000
WebElements:Ds
darmstadtium
chebi_ontology
110Ds
Ds
Uun
darmstadtio
ununnilium
CHEBI:33367
darmstadtium
A copper group element atom with atomic number 111. The the ninth member of the 6d series of transition metals, it is an extremely radioactive, synthetic element. Average mass is around 281.
錀
Roentgentium
roentgentium
roentgentio
roentgentio
0
Rg
InChI=1S/Rg
LJROPTGWFUZRDB-UHFFFAOYSA-N
0.000
0.00000
[Rg]
WebElements:Rg
Wikipedia:Roentgenium
roentgenium
chebi_ontology
111Rg
Rg
Roentgenium
Uuu
roentgenio
roentgenium
unununium
CHEBI:33368
roentgenium atom
铈
Zer
cérium
cerio
cerio
0
Ce
InChI=1S/Ce
GWXLDORMOJMVQZ-UHFFFAOYSA-N
140.11600
139.90544
[Ce]
CAS:7440-45-1
Gmelin:16275
WebElements:Ce
cerium
chebi_ontology
58Ce
Ce
Cer
Zer
cerio
CHEBI:33369
cerium
钕
Neodym
néodyme
neodimio
neodimio
0
Nd
InChI=1S/Nd
QEFYFXOXNSNQGX-UHFFFAOYSA-N
144.24000
141.90773
[Nd]
CAS:7440-00-8
Gmelin:16212
WebElements:Nd
neodymium
chebi_ontology
60Nd
Nd
Neodym
neodimio
neodyme
neodymium
CHEBI:33372
neodymium atom
钷
Promethium
prométhium
promecio
promezio
0
Pm
InChI=1S/Pm
VQMWBBYLQSCNPO-UHFFFAOYSA-N
145.00000
145.00000
[Pm]
CAS:7440-12-2
Gmelin:16237
WebElements:Pm
promethium
chebi_ontology
61Pm
Pm
Promethium
promethium
prometio
CHEBI:33373
promethium atom
钐
Samarium
samarium
samario
samario
0
Sm
InChI=1S/Sm
KZUNJOHGWZRPMI-UHFFFAOYSA-N
150.36000
151.91974
[Sm]
CAS:7440-19-9
Gmelin:16301
WebElements:Sm
samarium
chebi_ontology
62Sm
Sm
samario
samarium
CHEBI:33374
samarium atom
钆
Gadolinium
gadolinium
gadolineo
gadolinio
0
Gd
InChI=1S/Gd
UIWYJDYFSGRHKR-UHFFFAOYSA-N
157.25000
157.92411
[Gd]
CAS:7440-54-2
Gmelin:16286
WebElements:Gd
gadolinium
chebi_ontology
64Gd
Gd
gadolinio
gadolinium
CHEBI:33375
gadolinium atom
铽
Terbium
terbium
terbio
terbio
0
Tb
InChI=1S/Tb
GZCRRIHWUXGPOV-UHFFFAOYSA-N
158.92534
158.92535
[Tb]
CAS:7440-27-9
Gmelin:16311
WebElements:Tb
terbium
chebi_ontology
65Tb
Tb
terbio
terbium
CHEBI:33376
terbium atom
镝
Dysprosium
dysprosium
disprosio
disprosio
0
Dy
InChI=1S/Dy
KBQHZAAAGSGFKK-UHFFFAOYSA-N
162.50000
163.92918
[Dy]
CAS:7429-91-6
Gmelin:16278
WebElements:Dy
dysprosium
chebi_ontology
66Dy
Dy
disprosio
dysprosium
CHEBI:33377
dysprosium atom
铒
Erbium
erbium
erbio
erbio
0
Er
InChI=1S/Er
UYAHIZSMUZPPFV-UHFFFAOYSA-N
167.26000
165.93030
[Er]
CAS:7440-52-0
Gmelin:16280
WebElements:Er
erbium
chebi_ontology
68Er
Er
erbio
CHEBI:33379
erbium
铥
Thulium
thulium
tulio
tulio
0
Tm
InChI=1S/Tm
FRNOGLGSGLTDKL-UHFFFAOYSA-N
168.93421
168.93422
[Tm]
CAS:7440-30-4
Gmelin:16307
WebElements:Tm
thulium
chebi_ontology
69Tm
Tm
thulium
tulio
CHEBI:33380
thulium atom
镱
Ytterbium
ytterbium
iterbio
itterbio
0
Yb
InChI=1S/Yb
NAWDYIZEMPQZHO-UHFFFAOYSA-N
173.04000
173.93887
[Yb]
CAS:7440-64-4
Gmelin:16320
WebElements:Yb
ytterbium
chebi_ontology
70Yb
Yb
yterbio
CHEBI:33381
ytterbium
镥
Lutetium
lutécium
lutecio
lutezio
0
Lu
InChI=1S/Lu
OHSVLFRHMCKCQY-UHFFFAOYSA-N
174.96700
174.94078
[Lu]
CAS:7439-94-3
Gmelin:16202
WebElements:Lu
lutetium
chebi_ontology
71Lu
Cassiopeium
Lu
Lutetium
cassiopium
lutecio
lutecium
lutetium
CHEBI:33382
lutetium atom
钍
Thorium
thorium
torio
torio
0
Th
InChI=1S/Th
ZSLUVFAKFWKJRC-UHFFFAOYSA-N
232.03810
232.03806
[Th]
CAS:7440-29-1
KEGG:C19157
WebElements:Th
thorium
chebi_ontology
90Th
Th
torio
CHEBI:33385
thorium
镤
Protaktinium
protactinium
protactinio
protoattinio
0
Pa
InChI=1S/Pa
XLROVYAPLOFLNU-UHFFFAOYSA-N
231.03588
231.03589
[Pa]
CAS:7440-13-3
WebElements:Pa
protactinium
chebi_ontology
91Pa
Pa
brevium
protactinio
protactinium
protoactinium
CHEBI:33386
protactinium atom
镎
Neptunium
neptunium
neptunio
nettunio
0
Np
InChI=1S/Np
LFNLGNPSGWYGGD-UHFFFAOYSA-N
237.00000
237.00000
[Np]
CAS:7439-99-8
WebElements:Np
neptunium
chebi_ontology
93Np
Np
neptunio
neptunium
CHEBI:33387
neptunium atom
钚
Plutonium
plutonium
plutonio
plutonio
0
Pu
InChI=1S/Pu
OYEHPCDNVJXUIW-UHFFFAOYSA-N
244.00000
244.00000
[Pu]
CAS:7440-07-5
KEGG:C19159
WebElements:Pu
plutonium
chebi_ontology
94Pu
Pu
plutonio
plutonium
CHEBI:33388
plutonium atom
镅
Amerizium
américium
americio
americio
0
Am
InChI=1S/Am
LXQXZNRPTYVCNG-UHFFFAOYSA-N
243.00000
243.00000
[Am]
CAS:7440-35-9
WebElements:Am
americium
chebi_ontology
95Am
Am
Americium
Amerizium
americio
americium
CHEBI:33389
americium atom
锔
Kurium
curium
curio
curio
0
Cm
InChI=1S/Cm
NIWWFAAXEMMFMS-UHFFFAOYSA-N
247.00000
247.00000
[Cm]
CAS:7440-51-9
WebElements:Cm
curium
chebi_ontology
96Cm
Cm
curio
curium
CHEBI:33390
curium atom
锫
Berkelium
berkélium
berkelio
berkelio
0
Bk
InChI=1S/Bk
PWVKJRSRVJTHTR-UHFFFAOYSA-N
247.00000
247.00000
[Bk]
CAS:7440-40-6
WebElements:Bk
berkelium
chebi_ontology
97Bk
Berkelium
Bk
berkelio
berkelium
CHEBI:33391
berkelium atom
锎
Kalifornium
californium
californio
californio
0
Cf
InChI=1S/Cf
HGLDOAKPQXAFKI-UHFFFAOYSA-N
251.00000
251.00000
[Cf]
CAS:7440-71-3
WebElements:Cf
californium
chebi_ontology
98Cf
Cf
Kalifornium
californio
californium
CHEBI:33392
californium atom
锿
Einsteinium
einsteinium
einstenio
einstenio
0
Es
InChI=1S/Es
CKBRQZNRCSJHFT-UHFFFAOYSA-N
252.00000
252.00000
[Es]
CAS:7429-92-7
WebElements:Es
einsteinium
chebi_ontology
99Es
Es
einsteinio
einsteinium
CHEBI:33393
einsteinium atom
镄
Fermium
fermium
fermio
fermio
0
Fm
InChI=1S/Fm
MIORUQGGZCBUGO-UHFFFAOYSA-N
257.00000
257.00000
[Fm]
CAS:7440-72-4
WebElements:Fm
fermium
chebi_ontology
100Fm
Fm
fermio
CHEBI:33394
fermium
钔
Mendelevium
mendélévium
mendelevio
mendelevio
0
Md
InChI=1S/Md
MQVSLOYRCXQRPM-UHFFFAOYSA-N
258.00000
258.00000
[Md]
CAS:7440-11-1
WebElements:Md
mendelevium
chebi_ontology
101Md
Md
Mendelevium
Unu
mendelevio
mendelevium
unnilunium
CHEBI:33395
mendelevium atom
锘
Nobelium
nobélium
nobelio
nobelio
0
No
InChI=1S/No
ORQBXQOJMQIAOY-UHFFFAOYSA-N
259.00000
259.00000
[No]
CAS:10028-14-5
WebElements:No
Nobelium
nobelium
chebi_ontology
102No
No
Unb
nobelio
unnilbium
CHEBI:33396
nobelium
铹
Lawrencium
lawrencium
lawrencio
laurenzio
0
Lr
InChI=1S/Lr
CNQCVBJFEGMYDW-UHFFFAOYSA-N
262.00000
262.00000
[Lr]
CAS:22537-19-5
WebElements:Lr
lawrencium
chebi_ontology
103Lr
Lr
Unt
laurencio
lawrencio
lawrencium
unniltrium
CHEBI:33397
lawrencium atom
A zinc group element atom with a symbol Cn and atomic number 112. All its isotopes are intensely radioactive. Prior to its discovery, it had the placeholder name ununbium (in accordance with IUPAC recommendations). Following its discovery (in Darmstadt, 1996) and subsequent confirmation, the name copernicium was adopted in 2010.
鎶
Kopernikum
copérnicum
copernico
copernico
0
Cn
InChI=1S/Cn
NOTIIDSZELDPOP-UHFFFAOYSA-N
NaN
0.00000
[Cn]
Wikipedia:Copernicium
copernicium
chebi_ontology
112Cn
112Cp
112Uub
Cn
Uub
ununbium
CHEBI:33517
copernicium atom
An atom of an element that exhibits typical metallic properties, being typically shiny, with high electrical and thermal conductivity.
CHEBI:25217
CHEBI:6788
KEGG:C00050
PMID:21784043
Wikipedia:Metal
chebi_ontology
elemental metal
elemental metals
metal element
metal elements
metals
CHEBI:33521
metal atom
chebi_ontology
s-block element
s-block elements
CHEBI:33559
s-block element atom
Any main group element atom belonging to the p-block of the periodic table.
chebi_ontology
p-block element
p-block elements
CHEBI:33560
p-block element atom
chebi_ontology
d-block element
d-block elements
CHEBI:33561
d-block element atom
chebi_ontology
f-block element
f-block elements
CHEBI:33562
f-block element atom
A molecular entity containing one or more atoms from any of groups 1, 2, 13, 14, 15, 16, 17, and 18 of the periodic table.
chebi_ontology
main group compounds
main group molecular entities
CHEBI:33579
main group molecular entity
chebi_ontology
CHEBI:33937
macronutrient
Lepton is a fermion that does not experience the strong force (strong interaction). The term is derived from the Greek lambdaepsilonpitauomicronsigma (small, thin).
chebi_ontology
leptons
CHEBI:36338
lepton
Baryon is a fermion that does experience the strong force (strong interaction). The term is derived from the Greek betaalpharhoupsilonsigma (heavy).
chebi_ontology
baryons
CHEBI:36339
baryon
Particle of half-integer spin quantum number following Fermi-Dirac statistics. Fermions are named after Enrico Fermi.
fermion
chebi_ontology
fermions
CHEBI:36340
fermion
A particle smaller than an atom.
chebi_ontology
subatomic particles
CHEBI:36342
subatomic particle
A subatomic particle known to have substructure (i.e. consisting of smaller particles).
chebi_ontology
composite particles
CHEBI:36343
composite particle
Hadron is a subatomic particle which experiences the strong force.
chebi_ontology
hadrons
CHEBI:36344
hadron
A nucleus or any of its constituents in any of their energy states.
nuclear particle
chebi_ontology
CHEBI:36347
nuclear particle
氩
Argon
argon
argón
argo
0
Ar
InChI=1S/Ar
XKRFYHLGVUSROY-UHFFFAOYSA-N
39.94800
39.96238
[Ar]
CHEBI:33311
CAS:7440-37-1
WebElements:Ar
argon
chebi_ontology
18Ar
Ar
argon
CHEBI:49475
argon atom
A metallic element predicted as eka-aluminium by Mendeleev in 1870 and discovered by Paul-Emile Lecoq de Boisbaudran in 1875. Named in honour of France (Latin Gallia) and perhaps also from the Latin gallus cock, a translation of Lecoq.
镓
Gallium
gallium
galio
gallio
0
Ga
InChI=1S/Ga
GYHNNYVSQQEPJS-UHFFFAOYSA-N
69.72300
68.92557
[Ga]
CHEBI:33326
CHEBI:49630
CAS:7440-55-3
WebElements:Ga
gallium
chebi_ontology
31Ga
Ga
galio
gallium
CHEBI:49631
gallium atom
1
氢
Wasserstoff
hydrogène
hidrógeno
idrogeno
0
H
InChI=1S/H
YZCKVEUIGOORGS-UHFFFAOYSA-N
1.00794
1.00783
[H]
CHEBI:24634
CHEBI:49636
WebElements:H
hydrogen
chebi_ontology
1H
H
Wasserstoff
hidrogeno
hydrogen
hydrogene
CHEBI:49637
hydrogen atom
钬
Holmium
holmium
holmio
olmio
0
Ho
InChI=1S/Ho
KJZYNXUDTRRSPN-UHFFFAOYSA-N
164.93032
164.93033
[Ho]
CHEBI:33378
CHEBI:49647
CAS:7440-60-0
Gmelin:16291
WebElements:Ho
holmium
chebi_ontology
67Ho
Ho
holmio
holmium
CHEBI:49648
holmium atom
铱
Iridium
iridium
iridio
iridio
0
Ir
InChI=1S/Ir
GKOZUEZYRPOHIO-UHFFFAOYSA-N
192.21700
192.96292
[Ir]
CHEBI:33360
CHEBI:49665
CAS:7439-88-5
WebElements:Ir
iridium
chebi_ontology
77Ir
Ir
iridio
iridium
CHEBI:49666
iridium atom
氪
Krypton
krypton
criptón
kripto
0
Kr
InChI=1S/Kr
DNNSSWSSYDEUBZ-UHFFFAOYSA-N
83.80000
83.91150
[Kr]
CHEBI:33312
CAS:7439-90-9
WebElements:Kr
krypton
chebi_ontology
36Kr
Kr
cripton
kripton
krypton
CHEBI:49696
krypton atom
镨
Praseodym
praséodyme
prosedimio
praseodimio
0
Pr
InChI=1S/Pr
PUDIUYLPXJFUGB-UHFFFAOYSA-N
140.90765
140.90766
[Pr]
CHEBI:33370
CHEBI:49827
CAS:7440-10-0
WebElements:Pr
praseodymium
chebi_ontology
59Pr
Pr
Praseodym
praseodimio
praseodyme
praseodymium
CHEBI:49828
praseodymium atom
铼
Rhenium
rhénium
renio
renio
0
Re
InChI=1S/Re
WUAPFZMCVAUBPE-UHFFFAOYSA-N
186.20700
186.95575
[Re]
CHEBI:33354
CHEBI:49879
CAS:7440-15-5
WebElements:Re
rhenium
chebi_ontology
75Re
Re
Rhenium
renio
rhenium
CHEBI:49882
rhenium atom
氙
Xenon
xénon
xenón
xeno
0
Xe
InChI=1S/Xe
FHNFHKCVQCLJFQ-UHFFFAOYSA-N
131.29000
131.90416
[Xe]
CHEBI:32305
CAS:7440-63-3
Gmelin:16318
KEGG:C13373
WebElements:Xe
xenon
chebi_ontology
54Xe
Xe
Xenon
xenon
CHEBI:49957
xenon atom
A role played by a chemical compound which is known to induce a process of carcinogenesis by corrupting normal cellular pathways, leading to the acquistion of tumoral capabilities.
chebi_ontology
agente carcinogeno
cancerigene
cancerogene
carcinogen
carcinogene
carcinogenic agents
carcinogeno
carcinogens
CHEBI:50903
carcinogenic agent
A chemical compound, or part thereof, which causes the onset of an allergic reaction by interacting with any of the molecular pathways involved in an allergy.
Wikipedia:Allergen
chebi_ontology
alergeno
allergene
allergenic agent
CHEBI:50904
allergen
A role is particular behaviour which a material entity may exhibit.
chebi_ontology
CHEBI:50906
role
A biological role played by the molecular entity or part thereof within a biochemical context.
chebi_ontology
CHEBI:52206
biochemical role
A role played by the molecular entity or part thereof which causes the development of a pathological process.
chebi_ontology
etiopathogenetic agent
etiopathogenetic role
CHEBI:52209
aetiopathogenetic role
chebi_ontology
CHEBI:52211
physiological role
Any substance introduced into a living organism with therapeutic or diagnostic purpose.
CHEBI:33293
CHEBI:33294
chebi_ontology
farmaco
medicament
pharmaceuticals
CHEBI:52217
pharmaceutical
The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
chebi_ontology
antigenic determinant
epitope function
epitope role
CHEBI:53000
epitope
Any pharmacological or immunological agent that modifies the effect of other agents such as drugs or vaccines while having few if any direct effects when given by itself.
chebi_ontology
adjuvants
CHEBI:60809
adjuvant
Any metabolite produced during a metabolic reaction in eukaryotes, the taxon that include members of the fungi, plantae and animalia kingdoms.
chebi_ontology
eukaryotic metabolites
CHEBI:75763
eukaryotic metabolite
Any eukaryotic metabolite produced during a metabolic reaction in animals that include diverse creatures from sponges, insects to mammals.
CHEBI:77721
CHEBI:77743
chebi_ontology
animal metabolites
CHEBI:75767
animal metabolite
Any animal metabolite produced during a metabolic reaction in mammals.
CHEBI:77464
CHEBI:77744
chebi_ontology
mammalian metabolites
CHEBI:75768
mammalian metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae).
CHEBI:76949
CHEBI:76951
chebi_ontology
S. cerevisiae metabolite
S. cerevisiae metabolites
S. cerevisiae secondary metabolite
S. cerevisiae secondary metabolites
Saccharomyces cerevisiae metabolites
Saccharomyces cerevisiae secondary metabolites
baker's yeast metabolite
baker's yeast metabolites
baker's yeast secondary metabolite
baker's yeast secondary metabolites
CHEBI:75772
Saccharomyces cerevisiae metabolite
Any metabolite produced during a metabolic reaction in prokaryotes, the taxon that include members of domains such as the bacteria and archaea.
chebi_ontology
prokaryotic metabolites
CHEBI:75787
prokaryotic metabolite
Any eukaryotic metabolite produced during a metabolic reaction in fungi, the kingdom that includes microorganisms such as the yeasts and moulds.
CHEBI:75765
CHEBI:76947
chebi_ontology
fungal metabolites
CHEBI:76946
fungal metabolite
Any prokaryotic metabolite produced during a metabolic reaction in bacteria.
CHEBI:75760
CHEBI:76970
chebi_ontology
CHEBI:76969
bacterial metabolite
Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
chebi_ontology
E.coli metabolite
E.coli metabolites
Escherichia coli metabolites
CHEBI:76971
Escherichia coli metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
CHEBI:75770
CHEBI:77123
chebi_ontology
H. sapiens metabolite
H. sapiens metabolites
Homo sapiens metabolite
Homo sapiens metabolites
CHEBI:77746
human metabolite
Any substance that is distributed in foodstuffs. It includes materials derived from plants or animals, such as vitamins or minerals, as well as environmental contaminants.
chebi_ontology
dietary component
dietary components
food components
CHEBI:78295
food component
Any metal which causes the onset of an allergic reaction.
chebi_ontology
allergenic metal
allergenic metals
metal allergens
CHEBI:88184
metal allergen
The valence shell is the outermost shell of an atom.
https://en.wikipedia.org/wiki/Electron_shell
Oliver He, Kaiyong Liu
valence shell
A valence electron is an outer shell electron that is associated with an atom, and that can participate in the formation of a chemical bond if the outer shell is not closed; in a single covalent bond, both atoms in the bond contribute one valence electron in order to form a shared pair.
https://en.wikipedia.org/wiki/Valence_electron
Oliver He, Kaiyong Liu
valence electron
A quality of material that, when freshly prepared, polished, or fractured, shows a lustrous appearance, and conducts electricity and heat relatively well.
https://en.wikipedia.org/wiki/Metal
Oliver He, Kaiyong Liu
metal quality
A quality of material that conducts spontaneous nuclear decay.
radioactivity
https://opentextbc.ca/introductorychemistry/chapter/radioactivity-2/
radioactive quality
Nihonium is a synthetic chemical element with the symbol Nh and atomic number 113. It is extremely radioactive; its most stable known isotope, nihonium-286, has a half-life of about 10 seconds. In the periodic table, nihonium is a transactinide element in the p-block. It is a member of period 7 and group 13 (boron group).
https://en.wikipedia.org/wiki/Nihonium
钅尔
Nihonium
nihonium
nihonio
nihonio
Nh
nihonium
nihonium atom
An orbit followed by electrons around an atom's nucleus. The closest shell to the nucleus is called the "1 shell" (also called the "K shell"), followed by the "2 shell" (or "L shell"), then the "3 shell" (or "M shell"), and so on farther and farther from the nucleus. The shells correspond to the principal quantum numbers (n = 1, 2, 3, 4 ...) or are labeled alphabetically with the letters used in X-ray notation (K, L, M, …).
https://en.wikipedia.org/wiki/Electron_shell
Oliver He, Kaiyong Liu
electron shell
An element classied in the IUACP group in the periodic table
IUACP group element
https://en.wikipedia.org/wiki/Group_(periodic_table)
https://en.wikipedia.org/wiki/Periodic_table
Oliver He, Kaiyong Liu
International Union of Pure and Applied Chemistry (IUACP)
Under an international naming convention, the groups are numbered numerically from 1 to 18 from the leftmost column (the alkali metals) to the rightmost column (the noble gases).
element atom in IUACP group
part of an electron shell. For example, the first (K) shell has one subshell, called 1s; the second (L) shell has two subshells, called 2s and 2p; the third shell has 3s, 3p, and 3d; the fourth shell has 4s, 4p, 4d and 4f; the fifth shell has 5s, 5p, 5d, and 5f and can theoretically hold more in the 5g subshell that is not occupied in the ground-state electron configuration of any known element.
https://en.wikipedia.org/wiki/Electron_shell
subshell
A subshell that has a maxium of 10 electrons and is contained in the 3rd shell and higher.
diffuse subshell
https://en.wikipedia.org/wiki/Atomic_orbital
https://en.wikipedia.org/wiki/Electron_shell#Subshells
d subshell
A subshell that has a maxium of 2 electrons and is contained in every shell
https://en.wikipedia.org/wiki/Atomic_orbital
https://en.wikipedia.org/wiki/Electron_shell#Subshells
s subshell
A subshell that has a maxium of 18 electrons and is contained in the 5th shell and higher.
https://en.wikipedia.org/wiki/Atomic_orbital
https://en.wikipedia.org/wiki/Electron_shell#Subshells
g subshell
A subshell that has a maxium of 22 electrons with 11 atomic orbitals.
https://en.wikipedia.org/wiki/Atomic_orbital
https://socratic.org/questions/how-many-atomic-orbitals-are-there-in-an-h-subshell
h subshell
A subshell that has a maxium of 14 electrons and is contained in the 4th shell and higher.
https://en.wikipedia.org/wiki/Atomic_orbital
https://en.wikipedia.org/wiki/Electron_shell#Subshells
f subshell
A subshell that has a maxium of 6 electrons and is contained in the 2nd shell and higher.
https://en.wikipedia.org/wiki/Atomic_orbital
https://en.wikipedia.org/wiki/Electron_shell#Subshells
p subshell
1
1
an element atom in group 1 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)#Group_1
IUACP group 1 element atom
2
2
an element atom in group 2 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 2 element atom
3
3
an element atom in group 3 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 3 element atom
4
4
an element atom in group 4 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 4 element atom
5
5
an element atom in group 5 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 5 element atom
6
6
an element atom in group 6 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 6 element atom
7
7
an element atom in group 7 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 7 element atom
8
8
an element atom in group 8 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 8 element atom
9
9
an element atom in group 9 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 9 element atom
10
10
an element atom in group 10 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 10 element atom
11
11
an element atom in group 11 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 11 element atom
A quality of material that mostly lacks the characteristics of a metal. Physically, a nonmetal tends to have a relatively low melting point, boiling point, and density. A nonmetal is typically brittle when solid and usually has poor thermal conductivity and electrical conductivity. Chemically, nonmetals tend to have relatively high ionization energy, electron affinity, and electronegativity. They gain or share electrons when they react with other elements and chemical compounds.
https://en.wikipedia.org/wiki/Nonmetal
Kaiyong Liu, Oliver He
nonmetal quality
12
12
an element atom in group 12 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 12 element atom
3
3
an element atom in group 13 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 13 element atom
4
4
an element atom in group 14 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 14 element atom
5
5
an element atom in group 15 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 15 element atom
6
6
an element atom in group 16 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 16 element atom
7
7
an element atom in group 17 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
Group VIIA
IUACP group 17 element atom
0
0
7
an element atom in group 18 of the periodic table according to the IUACP classification
https://en.wikipedia.org/wiki/Group_(periodic_table)
IUACP group 18 element atom
An atom that is classified as a chemical element in a period (or row) in the periodic table.
https://en.wikipedia.org/wiki/Period_(periodic_table)
Oliver He, Kaiyong Liu
element atom in period
1
an element atom in period 1 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_1
period 1 element atom
2
an element atom in period 2 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_2
period 2 element atom
3
an element atom in period 3 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_3
period 3 element atom
4
an element atom in period 4 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_4
period 4 element atom
5
an element atom in period 5 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_5
period 5 element atom
7
4
Flerovium is a superheavy artificial chemical element with the symbol Fl and atomic number 114. It is an extremely radioactive synthetic element. The element is named after the Flerov Laboratory of Nuclear Reactions of the Joint Institute for Nuclear Research in Dubna, Russia, where the element was discovered in 1998.
https://en.wikipedia.org/wiki/Flerovium
钅夫
Flerovium
flerovium
flerovio
flerovio
Fl
flerovium
flerovium atom
Moscovium is a synthetic chemical element with the symbol Mc and atomic number 115. It was first synthesized in 2003 by a joint team of Russian and American scientists at the Joint Institute for Nuclear Research (JINR) in Dubna, Russia. In December 2015, it was recognized as one of four new elements by the Joint Working Party of international scientific bodies IUPAC and IUPAP. On 28 November 2016, it was officially named after the Moscow Oblast, in which the JINR is situated.
https://en.wikipedia.org/wiki/Moscovium
镆
Moscovium
moscovium
moscovio
moscovio
Mc
moscovium
moscovium atom
6
an element atom in period 6 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_6
period 6 element atom
7
an element atom in period 7 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_7
period 7 element atom
8
an element atom in period 8 of the periodic table
https://en.wikipedia.org/wiki/Period_(periodic_table)#Period_8
period 8 element atom
7
6
Livermorium is a synthetic chemical element with the symbol Lv and has an atomic number of 116. It is an extremely radioactive element that has only been created in the laboratory and has not been observed in nature.
https://en.wikipedia.org/wiki/Livermorium
鉝
Livermorium
livermorium
livermorio
livermorio
Lv
livermorium
The element is named after the Lawrence Livermore National Laboratory in the United States, which collaborated with the Joint Institute for Nuclear Research (JINR) in Dubna, Russia to discover livermorium during experiments made between 2000 and 2006. The name of the laboratory refers to the city of Livermore, California where it is located, which in turn was named after the rancher and landowner Robert Livermore. The name was adopted by IUPAC on May 30, 2012. Four isotopes of livermorium are known, with mass numbers between 290 and 293 inclusive; the longest-lived among them is livermorium-293 with a half-life of about 60 milliseconds. A fifth possible isotope with mass number 294 has been reported but not yet confirmed.
livermorium atom
Tennessine is a synthetic chemical element with the symbol Ts and atomic number 117. It is the second-heaviest known element and the penultimate element of the 7th period of the periodic table.
https://en.wikipedia.org/wiki/Tennessine
石田
Tennessine
tennessine
tennessio
tennessio
Ts
tennessine
tennessine atom
Oganesson is a synthetic chemical element with the symbol Og and atomic number 118. It was first synthesized in 2002 at the Joint Institute for Nuclear Research (JINR) in Dubna, near Moscow, Russia, by a joint team of Russian and American scientists. In December 2015, it was recognized as one of four new elements by the Joint Working Party of the international scientific bodies IUPAC and IUPAP. It was formally named on 28 November 2016
https://en.wikipedia.org/wiki/Oganesson
气奥
Oganesson
oganesson
oganessio
oganessio
Og
oganesson
oganesson atom
An atom that has an unstable nucleus and the unstable atomic nucleus loses energy by radiation.
https://en.wikipedia.org/wiki/Radioactive_decay
Oliver He, Kaiyong Liu
radioactive atom
A metal quality of material that is shiny, silvery-white, somewhat reactive at standard temperature and pressure.
The alkaline earth metals are six chemical elements in group 2 of the periodic table. They are beryllium (Be), magnesium (Mg), calcium (Ca), strontium (Sr), barium (Ba), and radium (Ra).
https://en.wikipedia.org/wiki/Alkaline_earth_metal
Kaiyong Liu, Oliver He
alkaline earth metal quality
A quality of material that has properties in between, or that is a mixture of, those of metals and nonmetals. There is neither a standard definition of a metalloid nor complete agreement on the elements appropriately classified as such. Despite the lack of specificity, the term remains in use in the literature of chemistry.
https://en.wikipedia.org/wiki/Metalloid
Kaiyong Liu, Oliver He
metalloid quality
A metal quality of material that is rare on earth.
As defined by the International Union of Pure and Applied Chemistry, a rare earth metal element is one of a set of seventeen chemical elements in the periodic table, specifically the fifteen lanthanides, as well as scandium and yttrium.
Despite their name, rare-earth elements are – with the exception of the radioactive promethium – relatively plentiful in Earth's crust, with cerium being the 25th most abundant element at 68 parts per million, more abundant than copper. However, because of their geochemical properties, rare-earth elements are typically dispersed and not often found concentrated in rare-earth minerals; as a result economically exploitable ore deposits are less common.
https://en.wikipedia.org/wiki/Rare-earth_element
Kaiyong Liu, Oliver He
The first rare-earth mineral discovered (1787) was gadolinite, a mineral composed of cerium, yttrium, iron, silicon, and other elements. This mineral was extracted from a mine in the village of Ytterby in Sweden; four of the rare-earth elements bear names derived from this single location.
rare earth metal quality
A nonmetal quality of material that isodorless, colorless, monatomic gases with very low chemical reactivity under standard conditions.
The noble gases are historically also called the inert gases and sometimes referred to as aerogens.
https://en.wikipedia.org/wiki/Noble_gas
Kaiyong Liu, Oliver He
noble gas quality
A metal quality of material that is shiny, soft, highly reactive at standard temperature and pressure and readily lose their outermost electron to form cations with charge +1.
https://en.wikipedia.org/wiki/Alkali_metal
Kaiyong Liu, Oliver He
alkali metal quality
Leonard Jacuzzo
Janna Hastings
Barry Smith
The BSD license on the BFO project site refers to code used to build BFO.
Pierre Grenon
David Osumi-Sutherland
Selja Seppälä
Werner Ceusters
Jie Zheng
Thomas Bittner
Mathias Brochhausen
This BFO 2.0 version represents a major update to BFO and is not strictly backwards compatible with BFO 1.1. The previous OWL version of BFO, version 1.1.1 will remain available at http://ifomis.org/bfo/1.1 and will no longer be updated. The BFO 2.0 OWL is a classes-only specification. The incorporation of core relations has been held over for a later version.
Mauricio Almeida
Please see the project site https://github.com/BFO-ontology/BFO, the bfo2 owl discussion group http://groups.google.com/group/bfo-owl-devel, the bfo2 discussion group http://groups.google.com/group/bfo-devel, the tracking google doc http://goo.gl/IlrEE, and the current version of the bfo2 reference http://purl.obolibrary.org/obo/bfo/dev/bfo2-reference.docx. This ontology is generated from a specification at https://github.com/BFO-ontology/BFO/tree/master/src/ontology/owl-group/specification/ and with the code that generates the OWL version in https://github.com/BFO-ontology/BFO/tree/master/src/tools/. A very early version of BFO version 2 in CLIF is at http://purl.obolibrary.org/obo/bfo/dev/bfo.clif.
Melanie Courtot
Bjoern Peters
Yongqun "Oliver" He
James A. Overton
Jonathan Bona
Holger Stenzhorn
Fabian Neuhaus
Randall Dipert
Stefan Schulz
Larry Hunter
BFO 2 Reference: BFO's treatment of continuants and occurrents - as also its treatment of regions, rests on a dichotomy between space and time, and on the view that there are two perspectives on reality - earlier called the 'SNAP' and 'SPAN' perspectives, both of which are essential to the non-reductionist representation of reality as we understand it from the best available science.
Chris Mungall
Ron Rudnicki
BFO 2 Reference: BFO does not claim to provide complete coverage of entities of all types. It seeks only to provide coverage of those entities studied by empirical science together with those entities which affect or are involved in human activities such as data processing and planning - coverage that is sufficiently broad to provide assistance to those engaged in building domain ontologies for purposes of data annotation.
Mark Ressler
Albert Goldfain
BFO 2 Reference: For both terms and relational expressions in BFO, we distinguish between primitive and defined. 'Entity' is an example of a primitive term. Primitive terms in a highest-level ontology such as BFO are terms that are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms.
Alan Ruttenberg
Bill Duncan
Ludger Jansen
1.2
For any queries contact chebi-help@ebi.ac.uk
Author: ChEBI curation team
developed by Michael Ashburner & Pankaj Jaiswal.
ChEBI Release version 184
ChEBI subsumes and replaces the Chemical Ontology first
27:01:2020 18:45