# Configuration

Commands use an executor, optional prompt template, and timeout:

```toml
[commands.audit]
executor = "codex"
prompt_file = "prompts/audit.md"
timeout = "30m"

[commands.custom-workflow]
executor = "custom-workflow-script"
timeout = "2h"
```

Without `prompt_file`, the input prompt is sent unchanged. With a template, include
`{{machinist.prompt}}`. Executors and repositories remain worker-owned:

```toml
[executors.custom-workflow-script]
command = ["./scripts/custom-workflow.sh"]

[repositories.my-project]
path = "/absolute/path/to/my-project"
```

Managed triggers select one command with `command = "audit"`. Model selection remains
available when the executor command includes `{{machinist.model}}`.

## Migration

The `agents` table was renamed to `commands`. Move `[agents.NAME]` to `[commands.NAME]`
and replace `--agent` with `--command`.

The pipeline feature was removed. Replace a sequential pipeline with one executable script,
configure that script as an approved worker executor, and expose it through one command.
Legacy `[pipelines]` configuration fails with migration guidance. Pre-command databases are
recreated once because this release intentionally consolidates the schema before active use.