- package_name: THzTools package_description: Data analysis software tools for terahertz time-domain spectroscopy (THz-TDS) submitting_author: name: J. Steven Dodge github_username: jsdodge all_current_maintainers: - name: J. Steven Dodge github_username: jsdodge repository_link: https://github.com/dodge-research-group/thztools version_submitted: 0.5.4 categories: - data-processing-munging editor: name: Bane Sullivan github_username: banesullivan eic: name: Chiara Marmo github_username: cmarmo reviewers: - name: Frank Male github_username: frank1010111 - name: github_username: Romain-Peretti archive: https://doi.org/10.5281/zenodo.10100093 version_accepted: 0.5.5 date_accepted: '2024-11-22' created_at: 2024-08-01 11:54:53+00:00 updated_at: 2025-03-26 06:49:24+00:00 closed_at: 2024-12-03 02:41:20+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/209 joss: https://doi.org/10.21105/joss.07542 partners: gh_meta: name: thztools description: Tools for terahertz time-domain spectroscopy (THz-TDS) created_at: '2022-11-22' stargazers_count: 16 watchers_count: 16 open_issues_count: 3 forks_count: 8 documentation: https://dodge-research-group.github.io/thztools/ contrib_count: 5 last_commit: '2024-12-03' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: MontePy package_description: MontePy is a python library for reading, editing, and writing MCNP input files. submitting_author: name: Micah Gale github_username: micahgale all_current_maintainers: - name: Micah Gale github_username: micahgale - name: Travis L. github_username: tjlaboss repository_link: https://github.com/idaholab/MontePy version_submitted: 0.2.10 categories: - workflow-automation - scientific-software-wrapper editor: name: Kelly L. Rowland github_username: kellyrowland eic: name: Chiara Marmo github_username: cmarmo reviewers: - name: Madicken Munk github_username: munkm - name: Joanna Piper Morgan github_username: jpmorgan98 archive: https://doi.org/10.11578/dc.20240115.1 version_accepted: TBD date_accepted: missing created_at: 2024-07-01 21:04:05+00:00 updated_at: 2025-03-20 20:20:06+00:00 closed_at: issue_link: https://github.com/pyOpenSci/software-submission/issues/205 joss: partners: gh_meta: name: MontePy description: MontePy is the most user friendly Python library (API) to read, edit, and write MCNP input files. created_at: '2024-01-09' stargazers_count: 40 watchers_count: 40 open_issues_count: 115 forks_count: 13 documentation: https://www.montepy.org/ contrib_count: 5 last_commit: '2025-03-31' labels: - 6/pyOS-approved - 7/under-joss-review active: true - package_name: Great Tables package_description: Make awesome display tables using Python. submitting_author: name: Richard Iannone github_username: rich-iannone all_current_maintainers: - name: Richard Iannone github_username: rich-iannone - name: Michael Chow github_username: machow repository_link: https://github.com/posit-dev/great-tables version_submitted: v0.13.0 categories: - data-visualization editor: name: Alex Batisse github_username: Batalex eic: name: Alex Batisse github_username: Batalex reviewers: - name: github_username: cjbassin - name: Guillaume Lemaitre github_username: glemaitre archive: https://github.com/posit-dev/great-tables/releases/tag/v0.14.0 version_accepted: v0.14.0 date_accepted: '2025-01-03' created_at: 2024-06-14 19:55:59+00:00 updated_at: 2025-02-21 14:40:26+00:00 closed_at: issue_link: https://github.com/pyOpenSci/software-submission/issues/202 joss: partners: gh_meta: name: great-tables description: Make awesome display tables using Python created_at: '2022-05-06' stargazers_count: 2162 watchers_count: 2162 open_issues_count: 113 forks_count: 86 documentation: https://posit-dev.github.io/great-tables/ contrib_count: 20 last_commit: '2025-03-24' labels: - 6/pyOS-approved - joss-submission-pending active: true - package_name: Stingray package_description: A spectral-timing software package for astrophysical X-ray (and other) data submitting_author: name: Matteo Bachetti github_username: matteobachetti all_current_maintainers: - name: Daniela Huppenkothen github_username: dhuppenkothen - name: Guglielmo Mastroserio github_username: mgullik - name: John Swinbank github_username: jdswinbank - name: github_username: matteolucchini1 repository_link: https://github.com/stingraysoftware/stingray version_submitted: '2.1' categories: - data-processing-munging - data-validation-testing editor: name: Hans Moritz Günther github_username: hamogu eic: name: Chiara Marmo github_username: cmarmo reviewers: - name: Tom Aldcroft github_username: taldcroft - name: Mason Ng github_username: masonng-astro archive: https://doi.org/10.5281/zenodo.11383212 version_accepted: '2.1' date_accepted: '2024-10-01' created_at: 2024-06-14 12:59:47+00:00 updated_at: 2024-11-23 00:06:34+00:00 closed_at: 2024-11-13 00:03:51+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/201 joss: https://joss.theoj.org/papers/10.21105/joss.07389 partners: - astropy gh_meta: name: stingray description: Anything can happen in the next half hour (including spectral timing made easy)! created_at: '2015-09-30' stargazers_count: 193 watchers_count: 193 open_issues_count: 62 forks_count: 159 documentation: https://stingray.science/stingray contrib_count: 30 last_commit: '2025-02-20' labels: - 6/pyOS-approved - 9/joss-approved - astropy active: true - package_name: astrodata package_description: Common interface for astronomical data products. submitting_author: name: D.J. Teal github_username: teald all_current_maintainers: - name: Teal github_username: teald - name: Chris Simpson github_username: chris-simpson - name: github_username: jehturner repository_link: https://github.com/GeminiDRSoftware/astrodata version_submitted: 2.9.2 categories: - data-extraction - data-processing-munging editor: name: Hans Moritz Günther github_username: hamogu eic: reviewers: - name: Aarya Patil github_username: aaryapatil - name: Matt Craig github_username: mwcraig archive: https://zenodo.org/records/14804283 version_accepted: 2.10.1 date_accepted: '2025-02-04' created_at: 2024-05-13 23:48:03+00:00 updated_at: 2025-02-05 11:53:23+00:00 closed_at: issue_link: https://github.com/pyOpenSci/software-submission/issues/181 joss: partners: - astropy gh_meta: name: astrodata description: created_at: '2023-10-17' stargazers_count: 1 watchers_count: 1 open_issues_count: 15 forks_count: 2 documentation: https://geminidrsoftware.github.io/astrodata/ contrib_count: 4 last_commit: '2025-03-05' labels: - 6/pyOS-approved - astropy active: true - package_name: QuadratiK package_description: QuadratiK includes test for multivariate normality, test for uniformity on the sphere, non-parametric two- and k-sample tests, random generation of points from the Poisson kernel-based density and clustering algorithm for spherical data. submitting_author: name: Raktim Mukhopadhyay github_username: rmj3197 all_current_maintainers: - name: Raktim Mukhopadhyay github_username: rmj3197 - name: Giovanni Saraceno github_username: giovsaraceno repository_link: https://github.com/rmj3197/QuadratiK version_submitted: 1.1.0 categories: - data-processing-munging editor: name: Isabel Zimmerman github_username: isabelizimm eic: name: Alex Batisse github_username: Batalex reviewers: - name: Alyssa Columbus github_username: acolum - name: Avik Basu github_username: ab93 archive: https://zenodo.org/records/14546750 version_accepted: 1.1.2 date_accepted: '2024-12-03' created_at: 2024-05-13 21:23:44+00:00 updated_at: 2025-03-17 01:23:41+00:00 closed_at: 2025-02-27 20:45:41+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/180 joss: partners: gh_meta: name: QuadratiK description: QuadratiK includes test for multivariate normality, test for uniformity on the sphere, non-parametric two- and k-sample tests, random generation of points from the Poisson kernel-based density and clustering algorithm for spherical data. created_at: '2024-02-04' stargazers_count: 3 watchers_count: 3 open_issues_count: 0 forks_count: 0 documentation: https://quadratik.readthedocs.io/ contrib_count: 1 last_commit: '2025-03-09' labels: - 6/pyOS-approved active: true - package_name: PyPartMC package_description: Python interface to PartMC aerosol-dynamics Monte-Carlo simulation package submitting_author: name: Sylwester Arabas github_username: slayoo all_current_maintainers: - name: Zach D'Aquino github_username: zdaq12 - name: Jeffrey Curtis github_username: jcurtis2 - name: Nicole Riemer github_username: nriemer - name: Matthew West github_username: mwest1066 repository_link: https://github.com/open-atmos/PyPartMC/ version_submitted: v1.2.0 categories: - scientific-software-wrapper editor: name: Chiara Marmo github_username: cmarmo eic: name: Alex Batisse github_username: Batalex reviewers: - name: Simon O'Meara github_username: simonom - name: Dan Baston github_username: dbaston archive: https://doi.org/10.5281/zenodo.14801138 version_accepted: 1.4.2 date_accepted: '2025-02-12' created_at: 2024-05-03 18:22:59+00:00 updated_at: 2025-02-17 21:44:56+00:00 closed_at: 2025-02-17 18:52:18+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/179 joss: partners: gh_meta: name: PyPartMC description: Python (and C++) interface to PartMC with Jupyter/Python, Julia and Matlab examples created_at: '2021-10-26' stargazers_count: 26 watchers_count: 26 open_issues_count: 61 forks_count: 14 documentation: https://open-atmos.github.io/PyPartMC/ contrib_count: 9 last_commit: '2025-03-15' labels: - 6/pyOS-approved active: true - package_name: pooltool package_description: Pooltool is a general purpose billiards simulator crafted specifically for science and engineering. submitting_author: name: Evan Kiefl github_username: ekiefl all_current_maintainers: - name: Evan Kiefl github_username: ekiefl repository_link: https://github.com/ekiefl/pooltool version_submitted: v0.3.3 categories: - data-processing-munging - data-visualization editor: name: Chiara Marmo github_username: cmarmo eic: name: Alex Batisse github_username: Batalex reviewers: - name: Sebastiano Tronto github_username: sebastianotronto - name: Eliot Robson github_username: eliotwrobson archive: https://doi.org/10.5281/zenodo.13824503 version_accepted: 0.4.1 date_accepted: '2024-09-16' created_at: 2024-04-15 21:44:43+00:00 updated_at: 2024-11-22 01:30:45+00:00 closed_at: 2024-10-01 11:51:34+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/173 joss: https://doi.org/10.21105/joss.07301 partners: gh_meta: name: pooltool description: A sandbox billiards game that emphasizes realistic physics created_at: '2020-04-09' stargazers_count: 260 watchers_count: 260 open_issues_count: 2 forks_count: 46 documentation: https://pooltool.readthedocs.io contrib_count: 8 last_commit: '2025-03-31' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: martini package_description: MARTINI is a modular package for the creation of synthetic resolved HI line observations (data cubes) of smoothed-particle hydrodynamics simulations of galaxies. submitting_author: name: Kyle Oman github_username: kyleaoman all_current_maintainers: - name: Kyle Oman github_username: kyleaoman repository_link: https://github.com/kyleaoman/martini version_submitted: 2.0.11 (note JOSS paper is in branch joss-paper, and that branch is somewhat behind main & 2.0.11) categories: - data-processing-munging editor: name: Hans Moritz Günther github_username: hamogu eic: name: Isabel Zimmerman github_username: isabelizimm reviewers: - name: Tom Aldcroft github_username: taldcroft - name: Michele Delli Veneri github_username: MicheleDelliVeneri archive: https://zenodo.org/doi/10.5281/zenodo.11193206 version_accepted: 2.0.15 date_accepted: '2024-06-03' created_at: 2024-03-06 17:08:29+00:00 updated_at: 2025-01-14 18:42:39+00:00 closed_at: 2024-07-01 15:58:14+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/164 joss: https://doi.org/10.21105/joss.06860 partners: - astropy gh_meta: name: martini description: Mock spatially resolved spectral line observations of simulated galaxies. created_at: '2017-10-19' stargazers_count: 16 watchers_count: 16 open_issues_count: 16 forks_count: 6 documentation: https://martini.readthedocs.io/ contrib_count: 1 last_commit: '2025-03-03' labels: - 6/pyOS-approved - 9/joss-approved - astropy active: true - package_name: ZodiPy package_description: Zodiacal emission simulations in timestreams or HEALPix for solar system observers. submitting_author: name: Metin San github_username: metinsa all_current_maintainers: - name: Metin San github_username: metinsa - name: Duncan Watts github_username: dncnwtts - name: Daniel Herman github_username: hermda02 repository_link: https://github.com/Cosmoglobe/zodipy version_submitted: v.0.8.5 categories: - scientific-software-wrapper editor: name: Derek Homeier github_username: dhomeier eic: name: Isabel Zimmerman github_username: isabelizimm reviewers: - name: P. L. Lim github_username: pllim - name: Leo Singer github_username: lpsinger archive: https://doi.org/10.5281/zenodo.10999612 version_accepted: v.0.9.2 date_accepted: '2024-04-21' created_at: 2024-02-24 12:28:07+00:00 updated_at: 2025-01-14 18:43:28+00:00 closed_at: 2024-05-13 17:38:26+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/161 joss: https://joss.theoj.org/papers/10.21105/joss.06648 partners: - astropy gh_meta: name: zodipy description: 'Astropy-affiliated package for zodiacal light simulations. Maintainer: @metinsa' created_at: '2021-08-11' stargazers_count: 11 watchers_count: 11 open_issues_count: 3 forks_count: 9 documentation: https://cosmoglobe.github.io/zodipy/ contrib_count: 8 last_commit: '2024-11-19' labels: - 6/pyOS-approved - 9/joss-approved - astropy active: true - package_name: plot_phylo package_description: A Python package to plot a phylogenetic tree on an existing Matplotlib axis. submitting_author: name: Katy Brown github_username: KatyBrown all_current_maintainers: - name: Katy Brown github_username: KatyBrown repository_link: https://github.com/KatyBrown/plot_phylo version_submitted: 1.9.0 categories: - data-visualization - workflow-automation editor: name: C. Titus Brown github_username: ctb eic: name: Isabel Zimmerman github_username: isabelizimm reviewers: - name: Ammar Aziz github_username: ammaraziz - name: Jayaram Kancherla github_username: jkanche archive: https://doi.org/10.5281/zenodo.13871592 version_accepted: 0.1.11 date_accepted: '2025-01-21' created_at: 2024-02-22 11:55:59+00:00 updated_at: 2025-03-19 21:22:07+00:00 closed_at: 2025-03-19 21:22:05+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/160 joss: partners: gh_meta: name: plot_phylo description: Python package to plot a phylogenetic tree on an existing matplotlib axis. created_at: '2023-12-22' stargazers_count: 16 watchers_count: 16 open_issues_count: 4 forks_count: 1 documentation: https://plot-phylo.readthedocs.io contrib_count: 1 last_commit: '2025-03-07' labels: - 6/pyOS-approved active: true - package_name: PetroFit package_description: The PetroFit Project is an open-source effort to develop end-to-end tools for making accurate photometric measurements, estimating morphological properties, and fitting 2D models to galaxy images. submitting_author: name: Robel Geda github_username: robelgeda all_current_maintainers: - name: Robel Geda github_username: robelgeda - name: Steve Crawford github_username: crawfordsm repository_link: https://github.com/PetroFit/petrofit version_submitted: v0.5.0 (will be updated to v1.0.0 after review) categories: - data-processing-munging editor: name: Derek Homeier github_username: dhomeier eic: name: Isabel Zimmerman github_username: isabelizimm reviewers: - name: Nadia Dencheva github_username: nden - name: Kyle Oman github_username: kyleaoman archive: https://doi.org/10.5281/zenodo.14962700 version_accepted: '[v0.6.0](https://github.com/PetroFit/petrofit/releases/tag/v0.6.0)' date_accepted: '2025-02-28' created_at: 2024-02-16 22:46:47+00:00 updated_at: 2025-03-03 23:41:20+00:00 closed_at: issue_link: https://github.com/pyOpenSci/software-submission/issues/159 joss: partners: - astropy gh_meta: name: petrofit description: Python package for calculating Petrosian properties and fitting galaxy light profiles created_at: '2021-03-16' stargazers_count: 28 watchers_count: 28 open_issues_count: 30 forks_count: 7 documentation: https://petrofit.readthedocs.io contrib_count: 3 last_commit: '2025-03-03' labels: - 6/pyOS-approved - astropy active: true - package_name: harmonize-wq package_description: Standardize, clean, and wrangle Water Quality Portal data into more analytic-ready formats submitting_author: name: Justin Bousquin github_username: jbousquin all_current_maintainers: - name: Justin Bousquin github_username: jbousquin repository_link: https://github.com/USEPA/harmonize-wq version_submitted: 0.4.0 categories: - data-processing-munging editor: name: Alex Batisse github_username: Batalex eic: name: Isabel Zimmerman github_username: isabelizimm reviewers: - name: Romain Caneill github_username: rcaneill - name: Jacqui Levy github_username: jacqui-123 archive: https://doi.org/10.5281/zenodo.13356847 version_accepted: 0.5.0 date_accepted: '2024-08-10' created_at: 2024-02-08 19:43:03+00:00 updated_at: 2025-02-06 17:12:04+00:00 closed_at: 2025-02-06 17:12:02+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/157 joss: https://doi.org/10.21105/joss.07305 partners: gh_meta: name: harmonize-wq description: Standardize, clean, and wrangle Water Quality Portal data into more analytic-ready formats created_at: '2022-06-27' stargazers_count: 16 watchers_count: 16 open_issues_count: 27 forks_count: 6 documentation: https://usepa.github.io/harmonize-wq/ contrib_count: 5 last_commit: '2025-02-06' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: xnemogcm package_description: Interface to open NEMO global circulation model output dataset with xarray and create a xgcm grid. submitting_author: name: Romain Caneill github_username: rcaneill all_current_maintainers: - name: Romain Caneill github_username: rcaneill repository_link: https://github.com/rcaneill/xnemogcm/ version_submitted: 0.4.2 categories: - data-processing-munging editor: name: Filipe github_username: ocefpaf eic: reviewers: - name: Paige Martin github_username: paigem - name: Callum Rollo github_username: callumrollo archive: https://doi.org/10.5281/zenodo.10973846 version_accepted: 0.4.3 date_accepted: '2024-04-02' created_at: 2024-01-06 12:33:45+00:00 updated_at: 2024-05-02 16:32:24+00:00 closed_at: 2024-04-18 10:12:09+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/155 joss: partners: gh_meta: name: xnemogcm description: Interface to open NEMO global circulation model output dataset with xarray and create a xgcm grid. created_at: '2020-01-24' stargazers_count: 21 watchers_count: 21 open_issues_count: 1 forks_count: 11 documentation: https://xnemogcm.readthedocs.io/ contrib_count: 6 last_commit: '2025-01-20' labels: - 6/pyOS-approved active: true - package_name: automata package_description: A Python library for simulating finite automata, pushdown automata, and Turing machines. submitting_author: name: Eliot Robson github_username: eliotwrobson all_current_maintainers: - name: Eliot Robson github_username: eliotwrobson - name: Caleb Evans github_username: caleb531 repository_link: https://github.com/caleb531/automata version_submitted: v8.2.0 categories: - data-processing-munging - data-visualization editor: name: Jonny Saunders github_username: sneakers-the-rat eic: name: Isabel Zimmerman github_username: isabelizimm reviewers: - name: Phil Dong github_username: phildong - name: Iris Young github_username: irisdyoung - name: Nima Sarajpoor github_username: NimaSarajpoor archive: https://doi.org/10.5281/zenodo.10864492 version_accepted: 8.4.0 ([repo](https://github.com/caleb531/automata/releases/tag/v8.4.0), [pypi](https://pypi.org/project/automata-lib/8.4.0/), [archive](https://zenodo.org/records/12594180)) date_accepted: '2024-06-29' created_at: 2023-12-31 02:23:34+00:00 updated_at: 2024-08-01 19:14:28+00:00 closed_at: 2024-08-01 19:14:27+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/152 joss: partners: gh_meta: name: automata description: A Python library for simulating finite automata, pushdown automata, and Turing machines created_at: '2016-02-16' stargazers_count: 375 watchers_count: 375 open_issues_count: 14 forks_count: 68 documentation: https://caleb531.github.io/automata/ contrib_count: 17 last_commit: '2025-02-27' labels: - 6/pyOS-approved active: true - package_name: SLEPLET package_description: Slepian Scale-Discretised Wavelets in Python submitting_author: name: Patrick J. Roddy github_username: paddyroddy all_current_maintainers: - name: Patrick J. Roddy github_username: paddyroddy repository_link: https://github.com/astro-informatics/sleplet version_submitted: '[v1.4.4](https://pypi.org/project/sleplet/1.4.4)' categories: - data-processing-munging - data-visualization editor: name: Szymon Moliński github_username: SimonMolinsky eic: name: David Nicholson github_username: NickleDave reviewers: - name: Shannon Quinn github_username: magsol - name: Jakub Tomasz Gnyp github_username: gnypit archive: https://doi.org/10.5281/zenodo.7268074 version_accepted: 1.4.7 date_accepted: '2024-05-21' created_at: 2023-11-16 01:32:15+00:00 updated_at: 2025-01-14 18:45:55+00:00 closed_at: 2024-06-06 08:29:04+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/149 joss: https://joss.theoj.org/papers/10.21105/joss.05221 partners: gh_meta: name: sleplet description: Slepian Scale-Discretised Wavelets in Python created_at: '2020-10-21' stargazers_count: 7 watchers_count: 7 open_issues_count: 7 forks_count: 1 documentation: https://pypi.org/project/sleplet contrib_count: 5 last_commit: '2025-03-04' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: sunpy package_description: Python for Solar Physics submitting_author: name: Nabil Freij github_username: nabobalis all_current_maintainers: - name: Steven Christe github_username: ehsteve - name: David Pérez-Suárez github_username: dpshelio - name: Jack Ireland github_username: wafels - name: Albert Y. Shih github_username: ayshih - name: Stuart Mumford github_username: Cadair - name: Nabil Freij github_username: nabobalis - name: David Stansby github_username: dstansby - name: DanRyanIrish github_username: DanRyanIrish - name: Will Barnes github_username: wtbarnes - name: Conor MacBride github_username: ConorMacBride - name: Alasdair Wilson github_username: alasdairwilson - name: Laura Hayes github_username: hayesla - name: Vishnunarayan K I github_username: vn-ki repository_link: https://github.com/sunpy/sunpy version_submitted: 5.0.1 categories: - data-retrieval - data-extraction - data-processing-munging - data-visualization editor: name: Chiara Marmo github_username: cmarmo eic: name: Isabel Zimmerman github_username: isabelizimm reviewers: - name: Septaris/Babouh github_username: Septaris - name: Sean Kelly github_username: nutjob4life archive: https://doi.org/10.5281/zenodo.8384174 version_accepted: 5.1.1 date_accepted: '2024-01-18' created_at: 2023-10-30 18:45:06+00:00 updated_at: 2025-01-14 18:46:34+00:00 closed_at: 2024-01-27 23:05:39+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/147 joss: https://joss.theoj.org/papers/10.21105/joss.01832 partners: gh_meta: name: sunpy description: SunPy - Python for Solar Physics created_at: '2011-08-06' stargazers_count: 948 watchers_count: 948 open_issues_count: 298 forks_count: 605 documentation: https://www.sunpy.org contrib_count: 30 last_commit: '2025-03-31' labels: - 6/pyOS-approved active: true - package_name: ncompare package_description: '`ncompare` compares two netCDF files at the command line, by generating a report of the matching and non-matching groups, variables, and attributes.' submitting_author: name: Daniel Kaufman github_username: danielfromearth all_current_maintainers: - name: Daniel Kaufman github_username: danielfromearth repository_link: https://github.com/nasa/ncompare version_submitted: 1.4.0 categories: - data-validation-testing editor: name: Tom Russell github_username: tomalrussell eic: name: David Nicholson github_username: NickleDave reviewers: - name: Chiara Marmo github_username: cmarmo - name: Michael Tso github_username: cmtso archive: https://zenodo.org/doi/10.5281/zenodo.10625407 version_accepted: 1.7.2 date_accepted: '2024-02-06' created_at: 2023-10-25 13:12:48+00:00 updated_at: 2025-01-14 18:47:21+00:00 closed_at: 2024-06-12 15:48:36+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/146 joss: https://doi.org/10.21105/joss.06490 partners: gh_meta: name: ncompare description: Compare the structure of two netCDF (or HDF5) files created_at: '2023-08-17' stargazers_count: 26 watchers_count: 26 open_issues_count: 3 forks_count: 10 documentation: https://ncompare.readthedocs.io contrib_count: 7 last_commit: '2025-01-08' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: rdata package_description: Read R datasets from Python. submitting_author: name: Carlos Ramos Carreño github_username: vnmabus all_current_maintainers: - name: Carlos Ramos Carreño github_username: vnmabus repository_link: https://github.com/vnmabus/rdata version_submitted: 0.9.2.dev1 categories: - data-processing-munging editor: name: Isabel Zimmerman github_username: isabelizimm eic: reviewers: - name: Richard Iannone github_username: rich-iannone - name: Hassan Kibirige github_username: has2k1 archive: https://doi.org/10.5281/zenodo.10776842 version_accepted: '[0.11.0](https://github.com/vnmabus/rdata/releases/tag/0.11.0)' date_accepted: 2024-2-29 created_at: 2023-10-20 08:26:10+00:00 updated_at: 2025-02-22 00:24:49+00:00 closed_at: 2025-02-21 20:20:59+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/144 joss: https://doi.org/10.21105/joss.07540 partners: gh_meta: name: rdata description: Reader of R datasets in .rda format, in Python created_at: '2018-07-02' stargazers_count: 52 watchers_count: 52 open_issues_count: 5 forks_count: 3 documentation: https://rdata.readthedocs.io contrib_count: 2 last_commit: '2025-03-12' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: EOmaps package_description: EOmaps is a python package to visualize, analyze and compare geographical datasets. submitting_author: name: Raphael Quast github_username: raphaelquast all_current_maintainers: - name: Raphael Quast github_username: raphaelquast repository_link: https://github.com/raphaelquast/EOmaps version_submitted: '7.3' categories: - data-visualization editor: name: Bane Sullivan github_username: banesullivan eic: reviewers: - name: Lauren Yee github_username: yeelauren - name: Joseph H Kennedy github_username: jhkennedy archive: https://doi.org/10.5281/zenodo.10822829 version_accepted: 8.0.2 date_accepted: '2024-03-14' created_at: 2023-09-26 12:14:47+00:00 updated_at: 2024-03-20 06:03:26+00:00 closed_at: 2024-03-20 05:56:50+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/138 joss: partners: gh_meta: name: EOmaps description: A library to create interactive maps of geographical datasets created_at: '2021-09-27' stargazers_count: 349 watchers_count: 349 open_issues_count: 18 forks_count: 27 documentation: https://eomaps.readthedocs.io/ contrib_count: 9 last_commit: '2025-02-05' labels: - 6/pyOS-approved active: true - package_name: sourmash package_description: '`sourmash` is a command line tool and Python library for sketching collections of DNA, RNA, and amino acid k-mers for biological sequence search, comparison, and analysis.' submitting_author: name: Tessa Pierce-Ward github_username: bluegenes all_current_maintainers: - name: C. Titus Brown github_username: ctb - name: Luiz Irber github_username: luizirber - name: Tessa Pierce Ward github_username: bluegenes repository_link: https://github.com/sourmash-bio/sourmash version_submitted: '4.8' categories: - data-processing-munging editor: name: Emily Jane McTavish github_username: snacktavish eic: reviewers: - name: Lili Andersson-Li github_username: LilyAnderssonLee - name: Elais Player github_username: elais archive: https://doi.org/10.5281/zenodo.10951577 version_accepted: '[v4.8.8](https://github.com/sourmash-bio/sourmash/releases/tag/v4.8.8)' date_accepted: 2024-4-4 created_at: 2023-08-14 21:02:57+00:00 updated_at: 2024-11-23 00:44:05+00:00 closed_at: 2024-07-22 20:13:57+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/129 joss: https://doi.org/10.21105/joss.06830 partners: gh_meta: name: sourmash description: Quickly search, compare, and analyze genomic and metagenomic data sets. created_at: '2016-04-09' stargazers_count: 495 watchers_count: 495 open_issues_count: 796 forks_count: 81 documentation: https://sourmash.readthedocs.io/en/latest/ contrib_count: 30 last_commit: '2025-03-25' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: Sciform package_description: A package for converting python numbers (floats, Decimals) into scientific-formatted strings more suitable for reading and presentation. submitting_author: name: Justin Gerber github_username: jagerber48 all_current_maintainers: - name: Justin Gerber github_username: jagerber48 repository_link: https://github.com/jagerber48/sciform version_submitted: 0.24.0 categories: - data-visualization editor: name: Alex Batisse github_username: Batalex eic: reviewers: - name: Isabel Zimmerman github_username: isabelizimm - name: Michael Chow github_username: machow archive: https://doi.org/10.5281/zenodo.10645273 version_accepted: 0.34.1 date_accepted: '2024-02-07' created_at: 2023-07-21 04:41:08+00:00 updated_at: 2024-05-02 17:46:01+00:00 closed_at: 2024-05-02 16:42:00+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/121 joss: partners: gh_meta: name: sciform description: A package for formatting numbers into scientific formatted strings. created_at: '2023-05-26' stargazers_count: 16 watchers_count: 16 open_issues_count: 8 forks_count: 2 documentation: https://sciform.readthedocs.io/en/stable/ contrib_count: 2 last_commit: '2024-11-15' labels: - 6/pyOS-approved active: true - package_name: astartes package_description: Better Data Splits for Machine Learning submitting_author: name: Jackson Burns github_username: JacksonBurns all_current_maintainers: - name: Kevin Spiekermann github_username: kspieks - name: Himaghna Bhattacharjee github_username: himaghna repository_link: https://github.com/JacksonBurns/astartes version_submitted: v[1.1.2](https://github.com/JacksonBurns/astartes/releases/tag/v1.1.2) categories: - data-processing-munging editor: name: Chiara Marmo github_username: cmarmo eic: reviewers: - name: Beryl Kanali github_username: BerylKanali - name: Du Phan github_username: du-phan archive: https://doi.org/10.5281/zenodo.8431894 version_accepted: v[1.1.3](https://github.com/JacksonBurns/astartes/releases/tag/v1.1.3) date_accepted: '2023-10-15' created_at: 2023-07-10 22:12:51+00:00 updated_at: 2025-02-01 17:50:10+00:00 closed_at: 2023-11-12 21:12:16+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/120 joss: https://doi.org/10.21105/joss.05996 partners: gh_meta: name: astartes description: Better Data Splits for Machine Learning created_at: '2022-04-22' stargazers_count: 78 watchers_count: 78 open_issues_count: 6 forks_count: 4 documentation: https://jacksonburns.github.io/astartes/ contrib_count: 3 last_commit: '2025-02-18' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: XGI package_description: XGI is a Python package for higher-order networks. submitting_author: name: Nicholas Landry github_username: nwlandry all_current_maintainers: - name: Nicholas Landry github_username: nwlandry - name: Leo Torres github_username: leotrs - name: Maxime Lucas github_username: maximelucas - name: Iacopo Iacopini github_username: iaciac - name: Giovanni Petri github_username: lordgrilo - name: Alice Schwarze github_username: acuschwarze - name: Thomas Robiglio github_username: thomasrobiglio - name: Alice Patania github_username: alpatania repository_link: https://github.com/xgi-org/xgi version_submitted: '0.7' categories: - data-retrieval - data-processing-munging - data-visualization editor: name: Szymon Moliński github_username: SimonMolinsky eic: reviewers: - name: Nhat Jonny Tran github_username: JonnyTran - name: Marta Leszczyńska github_username: Reckony archive: https://doi.org/10.5281/zenodo.8365068 version_accepted: 0.7.4 date_accepted: '2023-09-23' created_at: 2023-06-08 16:15:32+00:00 updated_at: 2025-02-01 17:51:41+00:00 closed_at: 2023-10-23 07:38:27+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/115 joss: https://doi.org/10.21105/joss.05162 partners: gh_meta: name: xgi description: CompleX Group Interactions (XGI) is a Python package for higher-order networks. created_at: '2021-09-08' stargazers_count: 203 watchers_count: 203 open_issues_count: 52 forks_count: 34 documentation: https://xgi.readthedocs.io contrib_count: 18 last_commit: '2025-03-31' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: biocypher package_description: framework for creating biomedical knowledge graphs submitting_author: name: Sebastian Lobentanzer github_username: slobentanzer all_current_maintainers: - name: Sebastian Lobentanzer github_username: slobentanzer repository_link: https://github.com/biocypher/biocypher version_submitted: 0.5.14 categories: - data-retrieval - data-extraction - data-processing-munging - data-deposition - data-validation-testing - workflow-automation - database-interoperability editor: name: Ariane Sasso github_username: arianesasso eic: reviewers: - name: Lukas Heumos github_username: Zethson - name: Moritz E. Beber github_username: Midnighter - name: github_username: Sinna archive: https://doi.org/10.5281/zenodo.10158204 version_accepted: v0.5.33 date_accepted: '2023-11-14' created_at: 2023-05-04 18:08:32+00:00 updated_at: 2023-12-14 23:29:54+00:00 closed_at: 2023-11-28 18:03:51+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/110 joss: partners: gh_meta: name: biocypher description: A unifying framework for biomedical research knowledge graphs created_at: '2021-09-10' stargazers_count: 247 watchers_count: 247 open_issues_count: 176 forks_count: 32 documentation: https://biocypher.org contrib_count: 17 last_commit: '2025-03-24' labels: - 6/pyOS-approved active: true - package_name: cardsort package_description: A python package to analyse data from open card sorting tasks submitting_author: name: Katharina Kloppenborg github_username: katoss all_current_maintainers: - name: Katharina Kloppenborg github_username: katoss repository_link: https://github.com/katoss/cardsort version_submitted: '[0.2.2](https://github.com/katoss/cardsort/releases/tag/v0.2.2)' categories: - data-extraction - data-processing-munging - data-visualization editor: name: Alex Batisse github_username: Batalex eic: reviewers: - name: Semidán Robaina github_username: Robaina - name: github_username: khynder archive: https://doi.org/10.5281/zenodo.8214655 version_accepted: v [0.2.36](https://github.com/katoss/cardsort/releases/tag/v0.2.36) date_accepted: '2023-08-16' created_at: 2023-04-20 11:29:27+00:00 updated_at: 2023-12-13 10:40:37+00:00 closed_at: 2023-08-23 08:21:12+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/102 joss: partners: gh_meta: name: cardsort description: A python package to analyse cardsorting data from kardsort.com outputs. created_at: '2023-03-16' stargazers_count: 8 watchers_count: 8 open_issues_count: 1 forks_count: 1 documentation: https://cardsort.readthedocs.io contrib_count: 4 last_commit: '2024-02-14' labels: - 6/pyOS-approved active: true - package_name: afscgap package_description: Community contributed Python-based tools for working with public bottom trawl surveys data from the NOAA Alaska Fisheries Science Center Groundfish Assessment Program ([NOAA AFSC GAP](https://www.fisheries.noaa.gov/contact/groundfish-assessment-program)). submitting_author: name: Sam Pottinger github_username: sampottinger all_current_maintainers: - name: A Samuel Pottinger github_username: sampottinger - name: Giulia Zarpellon github_username: gizarp repository_link: https://github.com/SchmidtDSE/afscgap version_submitted: 0.0.7 categories: - data-retrieval - data-processing-munging - data-visualization editor: name: Filipe github_username: ocefpaf eic: reviewers: - name: Tylar github_username: 7yl4r - name: Ayush Anand github_username: ayushanand18 archive: https://zenodo.org/badge/latestdoi/603308264 version_accepted: 0.0.7 date_accepted: '2023-05-30' created_at: 2023-03-25 00:27:27+00:00 updated_at: 2023-08-29 02:15:31+00:00 closed_at: 2023-06-28 19:06:00+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/93 joss: https://doi.org/10.21105/joss.05593 partners: gh_meta: name: afscgap description: Python-based tools for NOAA AFSC GAP marine species surveys data created_at: '2023-02-18' stargazers_count: 5 watchers_count: 5 open_issues_count: 3 forks_count: 4 documentation: https://pyafscgap.org contrib_count: 2 last_commit: '2025-01-08' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: taxpasta package_description: TAXonomic Profile Aggregation and STAndardisation submitting_author: name: Moritz E. Beber github_username: Midnighter all_current_maintainers: - name: Moritz E. Beber github_username: Midnighter - name: Sofia Stamouli github_username: sofstam - name: James A. Fellows Yates github_username: jfy133 repository_link: https://github.com/taxprofiler/taxpasta version_submitted: 0.2.1 categories: - data-processing-munging editor: name: C. Titus Brown github_username: ctb eic: reviewers: - name: Emily Jane McTavish github_username: snacktavish - name: Tessa Pierce Ward github_username: bluegenes archive: https://github.com/taxprofiler/taxpasta/releases/tag/0.4.0 version_accepted: 0.4.0 date_accepted: '2023-07-05' created_at: 2023-03-02 16:50:50+00:00 updated_at: 2023-12-13 10:49:10+00:00 closed_at: 2023-07-12 14:22:46+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/84 joss: https://doi.org/10.21105/joss.05627 partners: gh_meta: name: taxpasta description: TAXnomic Profile Aggregation and STAndardisation created_at: '2022-06-03' stargazers_count: 38 watchers_count: 38 open_issues_count: 13 forks_count: 7 documentation: https://taxpasta.readthedocs.io/ contrib_count: 5 last_commit: '2024-10-23' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: bibat package_description: An interactive template for Bayesian statistical analysis projects submitting_author: name: Teddy Groves github_username: teddygroves all_current_maintainers: - name: Teddy Groves github_username: teddygroves repository_link: https://github.com/teddygroves/bibat/ version_submitted: 0.1.0 categories: - workflow-automation editor: name: Meenal Jhajharia github_username: mjhajharia eic: reviewers: - name: Oriol Abril-Pla github_username: OriolAbril - name: Alexey Izmailov github_username: alizma archive: https://doi.org/10.5281/zenodo.8124312 version_accepted: 0.1.10 date_accepted: '2023-07-05' created_at: 2023-03-01 14:16:51+00:00 updated_at: 2023-12-14 23:37:44+00:00 closed_at: 2023-12-13 22:30:02+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/83 joss: partners: gh_meta: name: bibat description: A batteries-included template for Bayesian data analysis projects created_at: '2021-03-04' stargazers_count: 21 watchers_count: 21 open_issues_count: 13 forks_count: 2 documentation: https://bibat.readthedocs.io/ contrib_count: 1 last_commit: '2024-04-10' labels: - 6/pyOS-approved active: true - package_name: Python-graphblas package_description: 'Python library for GraphBLAS: high-performance sparse linear algebra for scalable graph analytics' submitting_author: name: Erik Welch github_username: eriknw all_current_maintainers: - name: Erik Welch github_username: eriknw - name: Jim Kitchen github_username: jim22k - name: Sultan Orazbayev github_username: SultanOrazbayev repository_link: https://github.com/python-graphblas/python-graphblas version_submitted: 2023.1.0 categories: - data-munging - scientific-software-wrapper editor: name: Tom Russell github_username: tomalrussell eic: reviewers: - name: Jonny Saunders github_username: sneakers-the-rat - name: Szabolcs Horvát github_username: szhorvat archive: https://doi.org/10.5281/zenodo.8125660 version_accepted: 2023.7.0 date_accepted: '2023-07-14' created_at: 2023-02-04 23:07:20+00:00 updated_at: 2024-03-12 17:32:53+00:00 closed_at: 2023-07-27 17:48:29+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/81 joss: partners: gh_meta: name: python-graphblas description: 'Python library for GraphBLAS: high-performance sparse linear algebra for scalable graph analytics' created_at: '2019-11-11' stargazers_count: 132 watchers_count: 132 open_issues_count: 59 forks_count: 15 documentation: https://python-graphblas.readthedocs.io/en/stable/ contrib_count: 11 last_commit: '2025-02-26' labels: - 6/pyOS-approved active: true - package_name: xclim package_description: Climate indices computation package based on Xarray submitting_author: name: Trevor James Smith github_username: Zeitsperre all_current_maintainers: - name: Trevor James Smith github_username: Zeitsperre - name: Travis Logan github_username: tlogan2000 - name: Pascal Bourgault github_username: aulemahal repository_link: https://github.com/Ouranosinc/xclim version_submitted: v0.40.0 categories: - data-munging - reproducibility - geospatial editor: name: Alex Batisse github_username: Batalex eic: reviewers: - name: James Munroe github_username: jmunroe - name: Agustina github_username: aguspesce archive: https://zenodo.org/badge/latestdoi/142608764 version_accepted: v0.42.0 date_accepted: '2023-04-11' created_at: 2023-01-16 16:59:20+00:00 updated_at: 2023-09-18 22:18:20+00:00 closed_at: 2023-05-22 04:04:53+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/73 joss: https://doi.org/10.21105/joss.05415 partners: gh_meta: name: xclim description: 'Library of derived climate variables, ie climate indicators, based on xarray. ' created_at: '2018-07-27' stargazers_count: 353 watchers_count: 353 open_issues_count: 52 forks_count: 64 documentation: https://xclim.readthedocs.io/en/stable/ contrib_count: 30 last_commit: '2025-03-31' labels: - 6/pyOS-approved - 9/joss-approved - Pangeo active: true - package_name: crowsetta package_description: A Python tool to work with any format for annotating animal vocalizations and bioacoustics data. submitting_author: name: David Nicholson github_username: NickleDave all_current_maintainers: - name: David Nicholson github_username: NickleDave repository_link: https://github.com/vocalpy/crowsetta version_submitted: '[4.0.0.post2](https://github.com/vocalpy/crowsetta/releases/tag/4.0.0.post2)' categories: - data-extraction - data-munging - reproducibility editor: name: Chiara Marmo github_username: cmarmo eic: reviewers: - name: Tessa Rhinehart github_username: rhine3 - name: Sylvain HAUPERT github_username: shaupert archive: https://zenodo.org/badge/latestdoi/159904494 version_accepted: v [5.0](https://github.com/vocalpy/crowsetta/releases/tag/5.0.0) date_accepted: '2023-03-28' created_at: 2023-01-03 19:39:16+00:00 updated_at: 2024-11-21 00:50:18+00:00 closed_at: 2023-04-13 20:26:00+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/68 joss: https://doi.org/10.21105/joss.05338 partners: gh_meta: name: crowsetta description: A tool to work with any format for annotating animal sounds created_at: '2018-12-01' stargazers_count: 52 watchers_count: 52 open_issues_count: 40 forks_count: 4 documentation: https://crowsetta.readthedocs.io/en/latest/ contrib_count: 2 last_commit: '2024-10-12' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: Pynteny package_description: Query sequence database by HMMs arranged in predefined synteny structure submitting_author: name: Semidán Robaina github_username: Robaina all_current_maintainers: - name: Semidán Robaina github_username: Robaina repository_link: https://github.com/Robaina/Pynteny version_submitted: v0.0.5 categories: - data-retrieval - data-extraction - education editor: name: Ariane Sasso github_username: arianesasso eic: reviewers: - name: Alex Batisse github_username: Batalex - name: Corinna Thoben github_username: c-thoben archive: https://doi.org/10.5281/zenodo.7696204 version_accepted: 1.0.0 date_accepted: '2023-03-10' created_at: 2022-12-16 22:02:53+00:00 updated_at: 2023-08-29 01:32:03+00:00 closed_at: 2023-04-12 20:48:15+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/67 joss: https://doi.org/10.21105/joss.05289 partners: gh_meta: name: Pynteny description: Query sequence database by HMMs arranged in predefined synteny structure created_at: '2022-06-06' stargazers_count: 13 watchers_count: 13 open_issues_count: 1 forks_count: 1 documentation: https://robaina.github.io/Pynteny contrib_count: 2 last_commit: '2023-11-03' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: Jointly package_description: Jointly is a python package for synchronizing sensors with accelerometer data submitting_author: name: Arne Herdick github_username: enra64 all_current_maintainers: - name: Arne github_username: enra64 - name: Ariane Sasso github_username: arianesasso repository_link: https://github.com/hpi-dhc/jointly version_submitted: 1.0.2 categories: - data-munging editor: name: Ivan Ogasawara github_username: xmnlab eic: reviewers: - name: Álex Sáez github_username: AlexS12 - name: K. Arthur Endsley github_username: arthur-e archive: https://zenodo.org/badge/latestdoi/303936309 version_accepted: 1.0.3 date_accepted: '2021-12-29' created_at: 2021-08-31 12:58:45+00:00 updated_at: 2023-08-29 02:01:15+00:00 closed_at: 2022-01-12 18:45:20+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/45 joss: partners: gh_meta: name: jointly description: 'Jointly: A Python package for synchronizing sensors with accelerometer data' created_at: '2020-10-14' stargazers_count: 11 watchers_count: 11 open_issues_count: 0 forks_count: 1 documentation: https://jointly.readthedocs.io/ contrib_count: 5 last_commit: '2022-01-11' labels: - 6/pyOS-approved active: true - package_name: PyGMT package_description: A Python interface for the Generic Mapping Tools submitting_author: name: Wei Ji Leong github_username: weiji14 all_current_maintainers: - name: Wei Ji github_username: weiji14 - name: Dongdong Tian github_username: seisman - name: Max Jones github_username: maxrjones - name: Michael Grund github_username: michaelgrund - name: Will Schlitzer github_username: willschlitzer - name: Yvonne Fröhlich github_username: yvonnefroehlich repository_link: https://github.com/GenericMappingTools/pygmt version_submitted: categories: - data-munging - data-visualization - geospatial editor: name: Leah Wasser github_username: lwasser eic: reviewers: - name: Julius Busecke github_username: jbusecke - name: Szymon Moliński github_username: simonmolinsky archive: https://zenodo.org/record/6702566 version_accepted: V 0.7.0 date_accepted: 2022-9-1 created_at: 2021-07-23 00:37:07+00:00 updated_at: 2024-12-15 05:27:30+00:00 closed_at: 2023-06-12 22:47:16+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/43 joss: partners: gh_meta: name: pygmt description: A Python interface for the Generic Mapping Tools. created_at: '2017-03-17' stargazers_count: 789 watchers_count: 789 open_issues_count: 192 forks_count: 228 documentation: https://www.pygmt.org contrib_count: 30 last_commit: '2025-03-31' labels: - 6/pyOS-approved active: true - package_name: Devicely package_description: A Python package for reading, timeshifting and writing sensor data submitting_author: name: Ariane Sasso github_username: arianesasso all_current_maintainers: - name: Ariane Sasso github_username: arianesasso repository_link: https://github.com/hpi-dhc/devicely version_submitted: 0.2.5 categories: - data-munging editor: name: Ivan Ogasawara github_username: xmnlab eic: reviewers: - name: Carol Willing github_username: willingc - name: Robert Guggenberger github_username: agricolab archive: https://zenodo.org/badge/latestdoi/279395106 version_accepted: v1.1.1 date_accepted: '2021-08-19' created_at: 2021-04-03 19:25:41+00:00 updated_at: 2023-08-29 02:06:23+00:00 closed_at: 2022-09-07 15:40:27+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/37 joss: https://doi.org/10.21105/joss.03679 partners: gh_meta: name: devicely description: 'Devicely: A Python package for reading, timeshifting and writing sensor data' created_at: '2020-07-13' stargazers_count: 16 watchers_count: 16 open_issues_count: 3 forks_count: 7 documentation: https://hpi-dhc.github.io/devicely/ contrib_count: 4 last_commit: '2021-12-21' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: openomics package_description: Library for integration of multi-omics, annotation, and interaction data submitting_author: name: Jonny Tran github_username: JonnyTran all_current_maintainers: - name: Nhat (Jonny) Tran github_username: JonnyTran repository_link: https://github.com/JonnyTran/OpenOmics version_submitted: '[0.8.4](https://github.com/JonnyTran/OpenOmics/releases/tag/v0.8.4)' categories: - data-retrieval - data-extraction - data-munging - reproducibility editor: name: David Nicholson github_username: NickleDave eic: reviewers: - name: Steve Moss github_username: gawbul - name: Katharina Sielemann github_username: ksielemann archive: https://doi.org/10.5281/zenodo.4731011 version_accepted: v [0.8.8](https://github.com/JonnyTran/OpenOmics/releases/tag/v0.8.8) date_accepted: '2021-04-17' created_at: 2021-01-01 19:54:20+00:00 updated_at: 2023-11-09 17:53:10+00:00 closed_at: 2021-05-10 17:48:02+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/31 joss: https://joss.theoj.org/papers/10.21105/joss.03249 partners: gh_meta: name: OpenOmics description: A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration. created_at: '2018-03-16' stargazers_count: 32 watchers_count: 32 open_issues_count: 23 forks_count: 12 documentation: https://openomics.readthedocs.io/en/latest/ contrib_count: 8 last_commit: '2024-05-15' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: Physcraper package_description: Automated phylogenetic updating submitting_author: name: Emily Jane McTavish github_username: snacktavish all_current_maintainers: - name: Emily Jane McTavish github_username: snacktavish - name: Luna L. Sanchez Reyes github_username: LunaSare repository_link: https://github.com/McTavishLab/physcraper version_submitted: '[0.55](https://github.com/McTavishLab/physcraper/releases/tag/0.55)' categories: - data-retrieval - data-munging editor: name: David Nicholson github_username: NickleDave eic: reviewers: - name: Boas Pucker github_username: bpucker - name: Leonardo de Oliveira Martins github_username: leomrtns archive: https://doi.org/10.5281/zenodo.5512990 version_accepted: v [1.0](https://github.com/McTavishLab/physcraper/releases/tag/v1.0.0) date_accepted: '2021-09-14' created_at: 2020-07-15 22:31:52+00:00 updated_at: 2023-09-09 19:52:35+00:00 closed_at: 2021-09-18 01:07:07+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/26 joss: partners: gh_meta: name: physcraper description: Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life. created_at: '2015-08-24' stargazers_count: 13 watchers_count: 13 open_issues_count: 36 forks_count: 6 documentation: https://physcraper.readthedocs.io/en/main/ contrib_count: 5 last_commit: '2022-05-13' labels: - 6/pyOS-approved active: true - package_name: pystiche package_description: Framework for Neural Style Transfer (NST) built upon PyTorch submitting_author: name: Philip Meier github_username: pmeier all_current_maintainers: - name: Philip Meier github_username: pmeier repository_link: https://github.com/pystiche/pystiche version_submitted: '[0.5.0post0](https://github.com/pystiche/pystiche/releases/tag/v0.5.0.post0)' categories: - reproducibility editor: name: David Nicholson github_username: NickleDave eic: reviewers: - name: Edgar Riba github_username: edgarriba - name: Soumith Chintala github_username: soumith archive: https://doi.org/10.5281/zenodo.4073515 version_accepted: v [0.6.0](https://github.com/pystiche/pystiche/releases/tag/v0.6.0) date_accepted: '2020-10-08' created_at: 2020-07-02 12:57:08+00:00 updated_at: 2023-11-08 23:49:27+00:00 closed_at: 2020-10-14 16:05:10+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/25 joss: https://joss.theoj.org/papers/10.21105/joss.02761 partners: gh_meta: name: pystiche description: Framework for Neural Style Transfer (NST) built upon PyTorch created_at: '2019-09-16' stargazers_count: 272 watchers_count: 272 open_issues_count: 15 forks_count: 27 documentation: contrib_count: 10 last_commit: '2022-03-18' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: phenopype package_description: a phenotyping pipeline for Python submitting_author: name: Moritz Lürig github_username: mluerig all_current_maintainers: - name: Moritz Lürig github_username: mluerig repository_link: https://github.com/phenopype/phenopype version_submitted: 1.0.5 categories: - data-extraction - reproducibility editor: name: Ben Cook github_username: jbencook eic: reviewers: - name: Arthur Porto github_username: agporto - name: Seth Donoughe github_username: sdonoughe archive: https://doi.org/10.5281/zenodo.4761417 version_accepted: 2.0.1 date_accepted: '2021-05-13' created_at: 2020-05-04 16:51:36+00:00 updated_at: 2023-09-09 20:44:07+00:00 closed_at: 2021-05-17 21:07:45+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/24 joss: partners: gh_meta: name: phenopype description: A phenotyping pipeline for Python created_at: '2022-01-04' stargazers_count: 11 watchers_count: 11 open_issues_count: 0 forks_count: 4 documentation: https://www.phenopype.org contrib_count: 1 last_commit: '2025-02-03' labels: - 6/pyOS-approved active: true - package_name: pyrolite package_description: A set of tools for getting the most from your geochemical data. submitting_author: name: Morgan Williams github_username: morganjwilliams all_current_maintainers: - name: Morgan Williams github_username: morganjwilliams repository_link: https://github.com/morganjwilliams/pyrolite version_submitted: '[0.2.5](https://github.com/morganjwilliams/pyrolite/releases/tag/0.2.5)' categories: - data-munging - reproducibility - education - data-visualization* editor: name: Leah Wasser github_username: lwasser eic: reviewers: - name: Romain Beucher github_username: rbeucher - name: Charles Le Losq github_username: charlesll archive: https://doi.org/10.5281/zenodo.3877690 version_accepted: v [0.2.7](https://github.com/morganjwilliams/pyrolite/releases/tag/0.2.7) date_accepted: '2020-06-04' created_at: 2020-02-19 04:54:35+00:00 updated_at: 2023-09-10 20:51:18+00:00 closed_at: 2020-06-09 13:13:43+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/20 joss: https://joss.theoj.org/papers/10.21105/joss.02314 partners: gh_meta: name: pyrolite description: A set of tools for getting the most from your geochemical data. created_at: '2018-06-13' stargazers_count: 141 watchers_count: 141 open_issues_count: 10 forks_count: 39 documentation: https://pyrolite.readthedocs.io contrib_count: 14 last_commit: '2024-10-29' labels: - 6/pyOS-approved - 9/joss-approved active: true - package_name: MovingPandas package_description: Trajectory classes and functions built on top of GeoPandas submitting_author: name: Anita Graser github_username: anitagraser all_current_maintainers: - name: Anita Graser github_username: anitagraser repository_link: https://github.com/movingpandas/movingpandas version_submitted: '0.2' categories: - geospatial - data-visualization* editor: name: Jenny Palomino github_username: jlpalomino eic: reviewers: - name: Ivan Ogasawara github_username: xmnlab - name: Martin Fleischmann github_username: martinfleis archive: https://doi.org/10.5281/zenodo.3710951 version_accepted: v [0.3.rc1](https://github.com/movingpandas/movingpandas/releases/tag/v0.3.rc1) date_accepted: '2020-03-19' created_at: 2020-01-06 17:13:27+00:00 updated_at: 2023-09-10 20:38:04+00:00 closed_at: 2020-04-08 17:14:16+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/18 joss: partners: gh_meta: name: movingpandas description: Movement trajectory classes and functions built on top of GeoPandas created_at: '2018-12-16' stargazers_count: 1285 watchers_count: 1285 open_issues_count: 28 forks_count: 197 documentation: https://movingpandas.org contrib_count: 30 last_commit: '2025-03-12' labels: - 6/pyOS-approved active: true - package_name: pandera package_description: validate the types, properties, and statistics of pandas data structures submitting_author: name: Niels Bantilan github_username: cosmicbboy all_current_maintainers: - name: Niels Bantilan github_username: cosmicbboy repository_link: https://github.com/unionai-oss/pandera version_submitted: 0.1.5 categories: - data-munging - reproducibility editor: name: Leah Wasser github_username: lwasser eic: reviewers: - name: Max Joseph github_username: mbjoseph - name: Ivan Ogasawara github_username: xmnlab archive: https://github.com/pandera-dev/pandera/releases/tag/v0.2.3 version_accepted: v0.2.3 date_accepted: '2019-10-10' created_at: 2019-08-14 22:21:25+00:00 updated_at: 2023-08-29 02:14:08+00:00 closed_at: 2021-12-16 21:55:55+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/12 joss: partners: gh_meta: name: pandera description: A light-weight, flexible, and expressive statistical data testing library created_at: '2018-11-01' stargazers_count: 3716 watchers_count: 3716 open_issues_count: 418 forks_count: 329 documentation: https://www.union.ai/pandera contrib_count: 30 last_commit: '2025-03-30' labels: - 6/pyOS-approved active: true - package_name: Nbless package_description: Construct, deconstruct, convert, execute, & prepare slides from Jupyter notebooks submitting_author: name: Martin Skarzynski github_username: marskar all_current_maintainers: - name: Martin Skarzynski github_username: marskar repository_link: https://github.com/py4ds/nbless version_submitted: 0.2.26 categories: - reproducibility - education editor: name: Leah Wasser github_username: lwasser eic: reviewers: - name: Filipe github_username: ocefpaf - name: Kylen Solvik github_username: kysolvik archive: version_accepted: TBD date_accepted: '2019-06-17' created_at: 2019-05-30 18:27:38+00:00 updated_at: 2025-01-13 17:42:30+00:00 closed_at: 2019-08-06 15:45:11+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/7 joss: partners: gh_meta: name: nbless description: Construct, deconstruct, convert, execute, and prepare slides from Jupyter notebooks created_at: '2018-09-05' stargazers_count: 34 watchers_count: 34 open_issues_count: 20 forks_count: 6 documentation: https://py4ds.github.io/nbless/ contrib_count: 4 last_commit: '2019-07-25' labels: - 6/pyOS-approved - archived active: false - package_name: earthpy package_description: A package built to support working with spatial data using open source python submitting_author: name: Leah Wasser github_username: lwasser all_current_maintainers: - name: Leah Wasser github_username: lwasser - name: Nathan Korinek github_username: nkorinek - name: Max Joseph github_username: mbjoseph - name: Joe McGlinchy github_username: joemcglinchy - name: Jenny Palomino github_username: jlpalomino repository_link: https://github.com/earthlab/earthpy version_submitted: '[0.7](https://github.com/earthlab/earthpy/releases/tag/v0.7.0)' categories: - geospatial editor: name: Luiz Irber github_username: luizirber eic: reviewers: - name: Rohit Goswami github_username: HaoZeke - name: Sean Gillies github_username: sgillies archive: https://doi.org/10.5281/zenodo.3520899 version_accepted: v [0.7.5](https://github.com/earthlab/earthpy/releases/tag/v0.7.5) date_accepted: '2019-11-06' created_at: 2019-05-08 15:02:14+00:00 updated_at: 2025-02-15 03:57:27+00:00 closed_at: 2019-11-13 22:59:32+00:00 issue_link: https://github.com/pyOpenSci/software-submission/issues/3 joss: https://joss.theoj.org/papers/10.21105/joss.01886 partners: gh_meta: name: earthpy description: A package built to support working with spatial data using open source python created_at: '2018-02-20' stargazers_count: 514 watchers_count: 514 open_issues_count: 42 forks_count: 162 documentation: https://earthpy.readthedocs.io contrib_count: 29 last_commit: '2023-08-23' labels: - 6/pyOS-approved - 9/joss-approved - archived active: false