@prefix : <http://purl.org/lscr#> .
@prefix dc: <http://purl.org/dc/elements/1.1/> .
@prefix up: <http://purl.uniprot.org/core/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix ebi: <http://rdf.ebi.ac.uk/terms/ensembl/> .
@prefix obo: <http://purl.obolibrary.org/obo/> .
@prefix oma: <http://omabrowser.org/ontology/oma#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix xml: <http://www.w3.org/XML/1998/namespace> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix lscr: <http://purl.org/lscr#> .
@prefix mbgd: <http://mbgd.genome.ad.jp/owl/mbgd#> .
@prefix orth: <http://purl.org/net/orth#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix ensembl: <http://rdf.ebi.ac.uk/resource/ensembl/> .
@prefix upuniprot: <http://purl.uniprot.org/uniprot/> .
@prefix ensemblprot: <http://rdf.ebi.ac.uk/resource/ensembl.protein/> .
@prefix ensembltrascript: <http://rdf.ebi.ac.uk/resource/ensembl.transcript/> .
@base <http://purl.org/lscr> .

<http://purl.org/lscr> rdf:type owl:Ontology ;
                        owl:versionIRI <http://purl.org/lscr/0.1> .

#################################################################
#    Annotation properties
#################################################################

###  http://purl.org/lscr#xrefEMBLSequence
lscr:xrefEMBLSequence rdf:type owl:AnnotationProperty ;
                      rdfs:comment "This cross-reference relates a given resource to any EMBL sequence database resource."@en ;
                      rdfs:label "see also EMBL sequence"@en ;
                      rdfs:subPropertyOf rdfs:seeAlso .


###  http://purl.org/lscr#xrefEnsembl
lscr:xrefEnsembl rdf:type owl:AnnotationProperty ;
                 rdfs:comment "This cross-reference relates a given resource to any Ensembl database resource."@en ;
                 rdfs:label "see also Ensembl cross-reference"@en ;
                 rdfs:subPropertyOf rdfs:seeAlso .


###  http://purl.org/lscr#xrefEnsemblGene
lscr:xrefEnsemblGene rdf:type owl:AnnotationProperty ;
                     rdfs:comment """This cross-reference relates a given resource to an Ensembl gene.

URI RDF instance template to assign this property: http://rdf.ebi.ac.uk/resource/ensembl/{ENSEMBL_GENE_ID}. Example: :ANY_URI lscr:xrefEnsemblGene http://rdf.ebi.ac.uk/resource/ensembl/ENSG00000139618"""@en ;
                     rdfs:label "see also Ensembl gene"@en ;
                     rdfs:subPropertyOf lscr:xrefEnsembl ;
                     rdfs:range obo:SO_0000704 .


###  http://purl.org/lscr#xrefEnsemblProtein
lscr:xrefEnsemblProtein rdf:type owl:AnnotationProperty ;
                        rdfs:comment """This cross-reference relates a given resource to an Ensembl protein.

URI RDF instance template to assign this property: http://rdf.ebi.ac.uk/resource/ensembl.protein/{ENSEMBL_PROTEIN_ID}. Example: :ANY_URI lscr:xrefEnsemblProtein http://rdf.ebi.ac.uk/resource/ensembl.protein/ENSP00000296370"""@en ;
                        rdfs:label "see also Ensembl protein"@en ;
                        rdfs:subPropertyOf lscr:xrefEnsembl ;
                        rdfs:range ebi:protein .


###  http://purl.org/lscr#xrefEnsemblTranscript
lscr:xrefEnsemblTranscript rdf:type owl:AnnotationProperty ;
                           rdfs:comment """This cross-reference relates a given resource to an Ensembl transcript.

URI RDF instance template to assign this property: http://rdf.ebi.ac.uk/resource/ensembl.transcript/{ENSEMBL_TRANSCRIPT_ID}. Example: :ANY_URI lscr:xrefEnsemblTranscript http://rdf.ebi.ac.uk/resource/ensembl.transcript/ENST00000380152"""@en ;
                           rdfs:label "see also Ensembl transcript"@en ;
                           rdfs:subPropertyOf lscr:xrefEnsembl ;
                           rdfs:range obo:SO_0000673 .


###  http://purl.org/lscr#xrefMBGD
lscr:xrefMBGD rdf:type owl:AnnotationProperty ;
              rdfs:comment "This cross-reference relates a given resource to any MBGD database resource.  MBGD: Microbial Genome Database for Comparative Analysis - mbgd.genome.ad.jp ."@en ;
              rdfs:label "see also MBGD cross-reference"@en ;
              rdfs:subPropertyOf rdfs:seeAlso .


###  http://purl.org/lscr#xrefMBGDGene
lscr:xrefMBGDGene rdf:type owl:AnnotationProperty ;
                  rdfs:comment "This cross-reference relates a given resource to an MBGD gene.  MBGD: Microbial Genome Database for Comparative Analysis - mbgd.genome.ad.jp ."@en ;
                  rdfs:label "see also MBGD gene"@en ;
                  rdfs:subPropertyOf lscr:xrefMBGD .


###  http://purl.org/lscr#xrefMBGDGroup
lscr:xrefMBGDGroup rdf:type owl:AnnotationProperty ;
                   rdfs:comment "This cross-reference relates a given resource to an MBGD group of genes.  MBGD: Microbial Genome Database for Comparative Analysis - mbgd.genome.ad.jp ."@en ;
                   rdfs:label "see also MBGD gene group"@en ;
                   rdfs:subPropertyOf lscr:xrefMBGD .


###  http://purl.org/lscr#xrefNCBI
lscr:xrefNCBI rdf:type owl:AnnotationProperty ;
              rdfs:comment """This cross-reference relates a given resource to any NCBI database resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
              rdfs:label "see also NCBI cross-reference"@en ;
              rdfs:subPropertyOf rdfs:seeAlso .


###  http://purl.org/lscr#xrefNCBIGene
lscr:xrefNCBIGene rdf:type owl:AnnotationProperty ;
                  rdfs:comment """This cross-reference relates a given resource to an NCBI gene resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
                  rdfs:label "see also NCBI gene"@en ;
                  rdfs:subPropertyOf lscr:xrefNCBI .


###  http://purl.org/lscr#xrefNCBIProtein
lscr:xrefNCBIProtein rdf:type owl:AnnotationProperty ;
                     rdfs:comment """This cross-reference relates a given resource to an NCBI protein resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
                     rdfs:label "see also NCBI protein"@en ;
                     rdfs:subPropertyOf lscr:xrefNCBI .


###  http://purl.org/lscr#xrefNCBIRefSeq
lscr:xrefNCBIRefSeq rdf:type owl:AnnotationProperty ;
                    rdfs:comment """This cross-reference relates a given resource to an NCBI Reference Sequence Database (RefSeq) resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
                    rdfs:label "see also NCBI RefSeq"@en ;
                    rdfs:subPropertyOf lscr:xrefNCBI .


###  http://purl.org/lscr#xrefOMA
lscr:xrefOMA rdf:type owl:AnnotationProperty ;
             rdfs:comment "This cross-reference relates a given resource to an OMA database resource."@en ;
             rdfs:label "see also OMA cross-reference"@en ;
             rdfs:subPropertyOf rdfs:seeAlso .


###  http://purl.org/lscr#xrefOMAGroup
lscr:xrefOMAGroup rdf:type owl:AnnotationProperty ;
                  rdfs:comment "This cross-reference relates a given resource to an OMA group of sequences (e.g.: proteins)."@en ;
                  rdfs:label "see also OMA group"@en ;
                  rdfs:subPropertyOf lscr:xrefOMA ;
                  rdfs:range orth:HomologsCluster .


###  http://purl.org/lscr#xrefOMAProtein
lscr:xrefOMAProtein rdf:type owl:AnnotationProperty ;
                    rdfs:comment """This cross-reference relates a given resource to an OMA proteins.

URI RDF instance template to assign this property: http://omabrowser.org/ontology/oma#PROTEIN_{OMA_ID}. Example: :ANY_URI lscr:xrefOMAProtein http://omabrowser.org/ontology/oma#PROTEIN_HUMAN22168"""@en ;
                    rdfs:label "see also OMA protein"@en ;
                    rdfs:subPropertyOf lscr:xrefOMA ;
                    rdfs:range orth:Protein .


###  http://purl.org/lscr#xrefUniprot
lscr:xrefUniprot rdf:type owl:AnnotationProperty ;
                 rdfs:comment """This cross-reference relates a given resource to  a UniProt protein.
URI RDF instance template to assign this property: http://purl.uniprot.org/uniprot/{UNIPROT_ID}. Example: :ANY_URI lscr:xrefUniprot http://purl.uniprot.org/uniprot/P68871"""@en ;
                 rdfs:label "see also UniProt cross-reference"@en ;
                 rdfs:subPropertyOf rdfs:seeAlso ;
                 rdfs:range up:Protein .

###  http://purl.org/lscr#xrefSwissProt
lscr:xrefSwissProt rdf:type owl:AnnotationProperty ;
                 rdfs:comment """This cross-reference relates a given resource to a UniProt/SwissProt protein.
URI RDF instance template to assign this property: http://purl.uniprot.org/uniprot/{UNIPROT_ID}. Example: :ANY_URI lscr:xrefSwissProt http://purl.uniprot.org/uniprot/P68871"""@en ;
                 rdfs:label "see also UniProt/SwissProt cross-reference"@en ;
                 rdfs:subPropertyOf lscr:xrefUniprot ;
                 rdfs:range up:Protein .

###  http://purl.org/lscr#xrefSwissProt
lscr:xrefTrEMBL rdf:type owl:AnnotationProperty ;
                 rdfs:comment """This cross-reference relates a given resource to a UniProt/TrEMBL protein.
URI RDF instance template to assign this property: http://purl.uniprot.org/uniprot/{UNIPROT_ID}. Example: :ANY_URI lscr:xrefTrEMBL http://purl.uniprot.org/uniprot/H3BS01"""@en ;
                 rdfs:label "see also UniProt/TrEMBL cross-reference"@en ;
                 rdfs:subPropertyOf lscr:xrefUniprot ;
                 rdfs:range up:Protein .


#################################################################
#    RDF properties
#################################################################

###  http://purl.org/dc/terms/identifier
dct:identifier
    a rdf:Property ;
    rdfs:comment "An unambiguous reference to the resource within a given context."@en ;
    rdfs:isDefinedBy <http://purl.org/dc/terms/> ;
    rdfs:label "Identifier"@en ;
    rdfs:range rdfs:Literal .

#################################################################
#    Classes
#################################################################

###  http://purl.obolibrary.org/obo/SO_0000673
obo:SO_0000673 rdf:type owl:Class ;
               rdfs:isDefinedBy "https://www.ebi.ac.uk/rdf/documentation/ensembl/" ;
               rdfs:label "Transcript" .


###  http://purl.obolibrary.org/obo/SO_0000704
obo:SO_0000704 rdf:type owl:Class ;
               rdfs:isDefinedBy "http://www.ontobee.org/ontology/SO?iri=http://purl.obolibrary.org/obo/SO_0000704" ;
               rdfs:label "Gene" .


###  http://purl.org/net/orth#Gene
orth:Gene rdf:type owl:Class ;
          rdfs:isDefinedBy "https://github.com/qfo/OrthologyOntology" .


###  http://purl.org/net/orth#HomologsCluster
orth:HomologsCluster rdf:type owl:Class ;
                     rdfs:comment "Set of homologous sequences"@en ;
                     rdfs:label "Cluster of homologous sequences"@en .


###  http://purl.org/net/orth#Protein
orth:Protein rdf:type owl:Class ;
             rdfs:isDefinedBy "https://github.com/qfo/OrthologyOntology" .


###  http://purl.uniprot.org/core/Protein
up:Protein rdf:type owl:Class ;
           rdfs:isDefinedBy "http://purl.uniprot.org/core/" .


###  http://rdf.ebi.ac.uk/terms/ensembl/protein
ebi:protein rdf:type owl:Class ;
            rdfs:isDefinedBy "https://www.ebi.ac.uk/rdf/documentation/ensembl/" .


###  Generated by the OWL API (version 4.2.8.20170104-2310) https://github.com/owlcs/owlapi