channels: - https://packages.qiime2.org/qiime2/2025.4/moshpit/passed - conda-forge - bioconda dependencies: - biom-format=2.1.16 - biopython=1.83 - bowtie2=2.5.1 - entrezpy=2.1.2 - fastp=0.24.0 - h5py=3.11.0 - hdf5=1.14.3 - mafft=7.526 - matplotlib=3.8.4 - moshpit=0.0.1+10.g6a24090 - notebook=6.5.5 - numpy=1.26.4 - pandas=2.2.2 - parsl=2024.4.15 - patsy=0.5.6 - pysam=0.22.1 - python=3.10 - q2-alignment=2025.4.0.dev0+7.g5073163 - q2-annotate=2025.4.0.dev0+30.g204e08f - q2-assembly=2025.4.0.dev0+11.gb2b08fa - q2-composition=2025.4.0.dev0+19.g7c877df - q2-cutadapt=2025.4.0.dev0+9.gaec0799 - q2-demux=2025.4.0.dev0+8.g10f924a - q2-diversity-lib=2025.4.0.dev0+8.g56d97e1 - q2-diversity=2025.4.0.dev0+10.g7931356 - q2-emperor=2025.4.0.dev0+8.g018b885 - q2-feature-classifier=2025.4.0.dev0+9.gc64bc5c - q2-feature-table=2025.4.0.dev0+13.g0ed9a00 - q2-fondue=2025.4.0.dev0+6.g525c45b - q2-longitudinal=2025.4.0.dev0+8.g3131278 - q2-metadata=2025.4.0.dev0+8.g66139ab - q2-mystery-stew=2025.4.0.dev0+8.g9b6c7a8 - q2-quality-control=2025.4.0.dev0+11.g3c60c1f - q2-quality-filter=2025.4.0.dev0+9.g86cb430 - q2-sample-classifier=2025.4.0.dev0+8.gf4db42f - q2-sapienns=2025.4.0.dev0+9.gc25e495 - q2-sourmash=2025.4.0.dev0+2.ged0fedc - q2-taxa=2025.4.0.dev0+8.g095dbe6 - q2-types=2025.4.0.dev0+16.g229da69 - q2-vizard=2025.4.0.dev0+90.ga641e5c - q2-vsearch=2025.4.0.dev0+13.gf376287 - q2cli=2025.4.0.dev0+14.g13c6e4d - q2templates=2025.4.0.dev0+7.g55d3090 - qiime2=2025.4.0.dev0+15.gb11fe02 - r-base=4.3.3 - r-reticulate=1.36.0 - rescript=2025.4.0.dev0+17.gaeb7832 - rnanorm=2.1.0 - scikit-bio=0.6.2 - scikit-learn=1.4.2 - scipy=1.13.0 - seaborn=0.12.2 - sepp=4.5.5 - spades=4.0.0 - tqdm=4.62.3 - umap-learn=0.5.4 - unifrac-binaries=1.4 - unifrac=1.3 - vsearch=2.22.1 extras: variant_override: qiime2_epoch: '2025.4'