channels: - https://packages.qiime2.org/qiime2/2026.4/pathogenome/passed - conda-forge - bioconda dependencies: - biom-format=2.1.17 - click=8.1.8 - fastcluster=1.3.0 - frictionless=5.5.0 - genomad=1.11.2 - h5py=3.15.1 - hdf5=1.14.6 - matplotlib=3.10.8 - networkx=3.6.1 - numpy=2.4.2 - pandas=2.3.3 - parsl=2026.2.23 - prodigal=2.6.3 - pyarrow=16.1.0 - python=3.12 - q2-amrfinderplus=2026.4.0 - q2-demux=2026.4.0 - q2-feature-table=2026.4.0 - q2-metadata=2026.4.0 - q2-mystery-stew=2026.4.0 - q2-types=2026.4.0 - q2-viromics=2026.4.0 - q2-vizard=2026.4.0 - q2cli=2026.4.0 - q2templates=2026.4.0 - qiime2=2026.4.0 - r-reticulate=1.45.0 - rachis=2026.4.0 - rnanorm=2.1.0 - scikit-bio=0.7.2 - scipy=1.17.1 - screed=1.0.4 - seaborn=0.13.2 - spades=4.2.0 - tqdm=4.67.3 - tzlocal=5.3.1 - unifrac-binaries=1.5.1 - unifrac=1.5.1 extras: variant_override: qiime2_epoch: '2026.4'