# Refgenie manuscripts

If you use Refgenie in your research, please consider citing these manuscripts:

- [Stolarczyk et al. (2020) *Refgenie: a reference genome resource manager*](https://doi.org/10.1093/gigascience/giz149): introductory publication
- [Stolarczyk et al. (2021) *Identity and compatibility of reference genome resources*](https://doi.org/10.1093/nargab/lqab036): sequence-derived genome identifiers, data provenance tracking

# Manuscripts using refgenie

Did you use refgenie in your research? [Add your manuscript to this list!](https://github.com/refgenie/refgenie/edit/master/docs/manuscripts.md)

- [VijayKrishna et al. (2020) *Expanding the Galaxy’s reference data*](https://www.biorxiv.org/content/10.1101/2020.10.09.327114v1): refgenie-Galaxy integration