{ "completion": "partial", "coverage": { "denominator": 2972, "scored": 2972, "unscored": 0 }, "coverage_context": { "not_selected": 0, "selected": 2972, "unscored_file_scope": "selected inputs only; not_selected counted separately" }, "created_at": "2026-09-21T12:33:47.008816+00:00", "dataset_id": "proteingym-dms-substitutions-v1.3", "environment": { "architecture": "arm64", "container_digest": "unreported", "container_runtime": "unreported", "platform": "macOS-26.6.2-arm64-arm-64bit", "python": "3.11.13", "rewirebench": "0.4.0", "sdk_code_sha256": "08cbbaac2aa8f60af5c43af7a83410e9690b44c5e4d162fbe1e5766885952fce", "sif_sha256": "unreported" }, "execution": { "adapter": "SeededRandomScore", "batch_size": 32, "fitting": "none", "inference_and_fit_seconds": 0.005387083001551218, "mode": "local_adapter", "prediction_type": "scalar" }, "independently_reproduced": false, "input_information": "protocol allowlisted biological inputs; see baseline configuration for extra inputs", "kind": "rewire_local_evaluation", "metrics": {}, "model": { "name": "Seeded random ranking control", "training_overlap": "no labelled fitting" }, "model_configuration": { "baseline_id": "seeded-random-v1", "baseline_version": "1", "limitation": "One seeded control is not an uncertainty estimate; IDs bind the run", "method": "SHA256(seed:prepared_id), first 64 bits / 2**64", "seed": 0 }, "predictions_sha256": "37a020ad31e35d57a924397c395c10bfac152417f0a42207400cef789d3d5e02", "prepared_sha256": "9f0e0cce34942797364990ef4dc9fb8b382f7b2fd59e6c72de23efc2992fb148", "protocol_configuration": { "aggregation": "round_assay_3dp_then_mean_by_UniProt_and_selection_then_equal_category_mean", "assays": { "AMFR_HUMAN_Tsuboyama_2023_4G3O": { "MSA_Neff_L_category": "Medium", "UniProt_ID": "AMFR_HUMAN", "expected_count": 2972, "prepared_count": 2972, "selection_type": "Stability", "taxon": "Human" } }, "binary_labels": "official_DMS_score_bin", "official_assay_count": 217, "official_variant_count": 2465767, "score_direction": "higher_is_better" }, "protocol_id": "proteingym-v1.3-dms-substitutions", "protocol_results": { "aggregation": "round_assay_3dp_then_mean_by_UniProt_and_selection_then_equal_category_mean", "by_protein_selection_type": { "AMFR_HUMAN::Stability": { "AUC": 0.514, "MCC": 0.019, "NDCG": 0.526, "Spearman": 0.008, "Top_recall": 0.087 } }, "by_selection_type": { "Stability": { "AUC": 0.514, "MCC": 0.019, "NDCG": 0.526, "Spearman": 0.008, "Top_recall": 0.087 } }, "complete_assays": 1, "coverage": { "denominator": 2972, "eligible": 2972, "prepared": 2972, "scored": 2972 }, "data_verification": "local_bytes_hashed_not_independently_source_verified", "metrics": {}, "per_assay": { "AMFR_HUMAN_Tsuboyama_2023_4G3O": { "UniProt_ID": "AMFR_HUMAN", "eligible": 2972, "metrics": { "AUC": 0.514, "MCC": 0.019, "NDCG": 0.526, "Spearman": 0.008, "Top_recall": 0.087 }, "prepared": 2972, "scored": 2972, "selection_type": "Stability", "status": "complete" } }, "status": "partial_track", "total_assays": 217, "uncertainty": "not_estimated; upstream cross-model bootstrap differences are not an absolute score CI" }, "protocol_version": "1.3", "provenance": { "assay_sha256": { "AMFR_HUMAN_Tsuboyama_2023_4G3O": "dd911d925eca79329a496eb6cb7b181ab448e15db244daf1c1f9c01e8a704c2a" }, "data_verification": "local_bytes_hashed_not_independently_source_verified", "expected_hashes_checked": [ "AMFR_HUMAN_Tsuboyama_2023_4G3O" ], "reference_sha256": "a8f498011532a74aa9fe556a50555a75e928c5837d19c06a87592ae04049b308", "source_url": "https://github.com/OATML-Markslab/ProteinGym/tree/144fe22b07dfaeec2b366f2346203a9838a55b4c", "upstream_revision": "144fe22b07dfaeec2b366f2346203a9838a55b4c" }, "review_status": "unreviewed_local_run", "schema_version": "1.0", "scope": "subset", "timing_seconds": { "evaluation": 0.05659729200124275 } }