{
  "completion": "complete",
  "coverage": {
    "denominator": 15003,
    "scored": 15003,
    "unscored": 0
  },
  "coverage_context": {
    "not_selected": 0,
    "selected": 15003,
    "unscored_file_scope": "selected inputs only; not_selected counted separately"
  },
  "created_at": "2026-09-20T20:46:33.087280+00:00",
  "dataset_id": "mrnabench-sample-mrl-designed-target_mrl_designed",
  "environment": {
    "architecture": "arm64",
    "container_digest": "unreported",
    "container_runtime": "unreported",
    "platform": "macOS-26.6.2-arm64-arm-64bit",
    "python": "3.11.13",
    "rewirebench": "0.4.0",
    "sdk_code_sha256": "fcc5ab65e6753cf29aabbdae231cbb5cdf72a3dd40ba8f109802c33223b33536",
    "sif_sha256": "unreported"
  },
  "execution": {
    "adapter": "TrainMean",
    "batch_size": 32,
    "fitting": "train_only",
    "inference_and_fit_seconds": 0.06764833299530437,
    "mode": "local_adapter",
    "prediction_type": "scalar"
  },
  "independently_reproduced": false,
  "input_information": "Complete source sequence only; no assay labels during prediction",
  "kind": "rewire_local_evaluation",
  "metrics": {
    "mse": 2.3655294722554605,
    "pearson": null,
    "spearman": null
  },
  "model": {
    "name": "Training mean (Rewire control)",
    "training_overlap": "No pretraining; fitted only on this protocol training split. Split is not a claim of homology separation."
  },
  "model_configuration": {
    "constant": "arithmetic mean of training targets",
    "fit_split": "train",
    "validation_used": false
  },
  "packages": {
    "numpy": "1.26.4",
    "pandas": "2.3.3",
    "pyarrow": "23.0.1",
    "rewirebench": "0.4.0",
    "scikit-learn": "1.8.0",
    "scipy": "1.15.3"
  },
  "predictions_sha256": "fb435ffda2e56792a9c781fba8dfda535b3d6508cf28f484162c5fd9065a87d8",
  "prepared_sha256": "f4f9777b5119b739437c6a9d85e4e1b937268dafd1307efca5f072d38957738b",
  "protocol_configuration": {
    "adapter_input_contract": "opaque-sequence-only-v1",
    "canonical_test_count": 15003,
    "dataset": "designed",
    "eligible_count": 100017,
    "excluded": [],
    "head": {
      "alphas": [
        0.001,
        0.01,
        0.1,
        1.0,
        10.0
      ],
      "fit_split": "train",
      "normalization": "none",
      "type": "RidgeCV"
    },
    "input_context": "Full processed sequence without CDS/splice/derived tracks",
    "metric": "mse",
    "metric_direction": "lower",
    "scope_note": "One Sample dataset/target only, not a complete mRNABench score",
    "seed": 2541,
    "smoke_limit_per_split": null,
    "source_count": 100017,
    "split_counts": {
      "test": 15003,
      "train": 70011,
      "validation": 15003
    },
    "split_ratios": [
      0.7,
      0.15,
      0.15
    ],
    "target": "target_mrl_designed",
    "task": "regression"
  },
  "protocol_id": "mrnabench-sample-mrl-v1",
  "protocol_results": {
    "complete": true,
    "coverage": {
      "denominator": 15003,
      "scored": 15003,
      "selected": 15003,
      "unscored": 0
    },
    "metric_directions": {
      "mse": "lower",
      "pearson": "higher",
      "spearman": "higher"
    },
    "metric_unavailable_reasons": {
      "pearson": "Fewer than two scored rows or constant values",
      "spearman": "Fewer than two scored rows or constant values"
    },
    "metrics": {
      "mse": 2.3655294722554605,
      "pearson": null,
      "spearman": null
    },
    "metrics_scope": "Scored test sequences for this dataset and target only",
    "protocol_id": "mrnabench-sample-mrl-v1",
    "scope": "full",
    "score_direction": "metric-specific",
    "suite_complete": false,
    "unscored_reasons": {
      "missing_prediction": 0,
      "not_selected": 0
    }
  },
  "protocol_version": "1",
  "provenance": {
    "data_verification": "pinned_source_bytes",
    "dataset_revision": "ef67f7cf8a999bb1c412ad6551aa7d9f901cbb95",
    "source_license": "unreported",
    "source_sha256": "8b8c57581d472e89a21f8b468b3b0599f6c235c01423264561e6c302d78927d4",
    "source_url": "https://huggingface.co/datasets/morrislab/mrl-sample/resolve/ef67f7cf8a999bb1c412ad6551aa7d9f901cbb95/mrl-sample-designed.parquet",
    "split_sha256": "00e287b18ba4e90cb682af6e3fcdfc97e07f2b4b25d13265cd0eca37996536a2",
    "upstream_code_license": "AGPL-3.0",
    "upstream_revision": "74f96b8e6ae9f41cc3cccff089d826a62d5604b8"
  },
  "publication_note": "Sanitized local execution report. Raw inputs, source membership, predictions and machine paths remain local. No published-score reproduction claim.",
  "release_wheel_sha256": "f5956f616c20f58299eef4d654b1297b0ce21e0033014cc5cb2c1a406f4b494a",
  "review_status": "unreviewed_local_run",
  "schema_version": "1.0",
  "scope": "full",
  "timing_seconds": {
    "evaluation": 1.1848423330011428
  }
}