[ { "Id": "b11c1a64d2935e2534cac8a85b839b02b7fe89c468bddf6217ec281f9d6b81fb", "Created": "2020-08-12T05:45:02.029856161Z", "Path": "/bin/sh", "Args": [ "-c", "sudo -E python /opt/digital_slide_archive/set_environment.py ubuntu && sudo -E sysctl -w net.ipv4.conf.eth0.route_localnet=1 && sudo -E iptables -t nat -A OUTPUT -o lo -p tcp -m tcp --dport 27017 -j DNAT --to-destination `dig +short mongodb`:27017 && sudo -E iptables -t nat -A POSTROUTING -o eth0 -m addrtype --src-type LOCAL --dst-type UNICAST -j MASQUERADE && sudo -E su ubuntu -c '/home/ubuntu/.virtualenvs/girder/bin/pip install -e /opt/HistomicsUI' ; sudo -E su ubuntu -c 'pushd /opt/slicer_cli_web; /home/ubuntu/.virtualenvs/girder/bin/pip install -e .[girder]; popd' ; sudo -E su ubuntu -c 'pushd /opt/girder; /home/ubuntu/.virtualenvs/girder/bin/pip install -e .[mount]; popd' ; sudo -E su ubuntu -c 'PYTHONUNBUFFERED=true PATH=\"/home/ubuntu/.virtualenvs/girder/bin:$PATH\" girder mount /opt/digital_slide_archive/mount >/opt/logs/mount.log 2>&1' ; sudo -E su ubuntu -c 'PYTHONUNBUFFERED=true PATH=\"/home/ubuntu/.virtualenvs/girder/bin:$PATH\" girder serve --dev >/opt/logs/girder.log 2>&1'" ], "State": { "Status": "running", "Running": true, "Paused": false, "Restarting": false, "OOMKilled": false, "Dead": false, "Pid": 28811, "ExitCode": 0, "Error": "", "StartedAt": "2020-09-14T12:02:36.932171521Z", "FinishedAt": "2020-09-14T12:02:34.726591725Z" }, "Image": "sha256:cca2c2eb2b706803a14903e45ff7961ab643cc2ff8872be8d3305d79dd138c90", "ResolvConfPath": "/var/lib/docker/containers/b11c1a64d2935e2534cac8a85b839b02b7fe89c468bddf6217ec281f9d6b81fb/resolv.conf", "HostnamePath": "/var/lib/docker/containers/b11c1a64d2935e2534cac8a85b839b02b7fe89c468bddf6217ec281f9d6b81fb/hostname", "HostsPath": "/var/lib/docker/containers/b11c1a64d2935e2534cac8a85b839b02b7fe89c468bddf6217ec281f9d6b81fb/hosts", "LogPath": "/var/lib/docker/containers/b11c1a64d2935e2534cac8a85b839b02b7fe89c468bddf6217ec281f9d6b81fb/b11c1a64d2935e2534cac8a85b839b02b7fe89c468bddf6217ec281f9d6b81fb-json.log", "Name": "/dsa_girder", "RestartCount": 393, "Driver": "overlay2", "Platform": "linux", "MountLabel": "", "ProcessLabel": "", "AppArmorProfile": "unconfined", "ExecIDs": null, "HostConfig": { "Binds": [ "/home/tele/.dsa/logs:/opt/logs:rw", "/home/tele/.dsa/logs:/opt/digital_slide_archive/logs:rw", "/home/tele/.dsa/assetstore:/opt/digital_slide_archive/assetstore:rw", "/usr/bin/docker:/usr/bin/docker", "/var/run/docker.sock:/var/run/docker.sock" ], "ContainerIDFile": "", "LogConfig": { "Type": "json-file", "Config": {} }, "NetworkMode": "default", "PortBindings": { "8080/tcp": [ { "HostIp": "", "HostPort": "8080" } ] }, "RestartPolicy": { "Name": "always", "MaximumRetryCount": 0 }, "AutoRemove": false, "VolumeDriver": "", "VolumesFrom": null, "CapAdd": null, "CapDrop": null, "Dns": [], "DnsOptions": [], "DnsSearch": [], "ExtraHosts": null, "GroupAdd": null, "IpcMode": "shareable", "Cgroup": "", "Links": [ "/dsa_mongodb:/dsa_girder/mongodb", "/dsa_rabbitmq:/dsa_girder/rabbitmq", "/dsa_memcached:/dsa_girder/memcached" ], "OomScoreAdj": 0, "PidMode": "", "Privileged": true, "PublishAllPorts": false, "ReadonlyRootfs": false, "SecurityOpt": [ "label=disable" ], "UTSMode": "", "UsernsMode": "", "ShmSize": 67108864, "Runtime": "runc", "ConsoleSize": [ 0, 0 ], "Isolation": "", "CpuShares": 0, "Memory": 0, "NanoCpus": 0, "CgroupParent": "", "BlkioWeight": 0, "BlkioWeightDevice": null, "BlkioDeviceReadBps": null, "BlkioDeviceWriteBps": null, "BlkioDeviceReadIOps": null, "BlkioDeviceWriteIOps": null, "CpuPeriod": 0, "CpuQuota": 0, "CpuRealtimePeriod": 0, "CpuRealtimeRuntime": 0, "CpusetCpus": "", "CpusetMems": "", "Devices": null, "DeviceCgroupRules": null, "DiskQuota": 0, "KernelMemory": 0, "MemoryReservation": 0, "MemorySwap": 0, "MemorySwappiness": null, "OomKillDisable": false, "PidsLimit": 0, "Ulimits": null, "CpuCount": 0, "CpuPercent": 0, "IOMaximumIOps": 0, "IOMaximumBandwidth": 0, "MaskedPaths": null, "ReadonlyPaths": null }, "GraphDriver": { "Data": { "LowerDir": "/var/lib/docker/overlay2/e08eb824f4c764a4a038c79ff1b8d9a22faaeba62787859ba068cf7eaba94992-init/diff:/var/lib/docker/overlay2/378cab40ae4ff4bd3e3a682692aee7f548de14c30852805eb234fa25c05907e8/diff:/var/lib/docker/overlay2/0e1b74a2ee718c7450e6bf2eb5f2cfeb5baf89aac3e2f483841bd8e566fbb38b/diff:/var/lib/docker/overlay2/7c7a1f9b730de5d00f2df5b06490afac39ee04b72c1edf813d7fd44d5d1b78be/diff:/var/lib/docker/overlay2/eda333cbc608706d8d3e76b9efec1cc9b6ddd00a612905185980bf6744b8a93f/diff:/var/lib/docker/overlay2/f2ce662ddad496ee414d7d8dcf564bb6fc573555480837b901513c5fefca0dd7/diff:/var/lib/docker/overlay2/611544f93049716c9ec28c12a718b2940ceea83bbe6d081950baf8cdc10beb57/diff:/var/lib/docker/overlay2/aaf31c3963cc27f7d4e98242c87de3730b30cfe94cb098efa810052bcf551f3c/diff:/var/lib/docker/overlay2/ec0117bb04438ea768f39d71e02415943cb403aeb2577829597716a8fd020258/diff:/var/lib/docker/overlay2/cd3bb7f29a8102c9269ed387e8c6aa4892fd1405c0bb41276a7cb1b962720afc/diff:/var/lib/docker/overlay2/37b7221f67ed0a3dfac0468615b99c6082a31b20110f509d418ea7c25a1f67b6/diff:/var/lib/docker/overlay2/81b5eece6b47d4c856b1a1ec21ca103a3509b2eb4e9d673b21aea84ff5d9326c/diff:/var/lib/docker/overlay2/6286b9580b64e611148f5e60853c7a3a57d972645cd893b784850b9c79a15ae1/diff:/var/lib/docker/overlay2/e0071b1066d86fea228ce37c193c76634d2e31d41d0fc4323e03ec18281bc2df/diff:/var/lib/docker/overlay2/e7c36eadef2a6ecfec4bbbccdf07e86082974a300269fe6311e7f3445e1d1e9e/diff:/var/lib/docker/overlay2/7066ebc4ddfff57ce75b7d7cdc4cb8a5e092a8e2842ac702309fbfe0307a3974/diff:/var/lib/docker/overlay2/f13f9471be6bf0242266a41fb2c16df04eabb27d69eb4800a7f35c9a11bc5c4e/diff:/var/lib/docker/overlay2/d22e3c7a772a6922039eeb974a9fd48de4fc008a12f557855eb5a0a6ec510e17/diff", "MergedDir": "/var/lib/docker/overlay2/e08eb824f4c764a4a038c79ff1b8d9a22faaeba62787859ba068cf7eaba94992/merged", "UpperDir": "/var/lib/docker/overlay2/e08eb824f4c764a4a038c79ff1b8d9a22faaeba62787859ba068cf7eaba94992/diff", "WorkDir": "/var/lib/docker/overlay2/e08eb824f4c764a4a038c79ff1b8d9a22faaeba62787859ba068cf7eaba94992/work" }, "Name": "overlay2" }, "Mounts": [ { "Type": "bind", "Source": "/home/tele/.dsa/assetstore", "Destination": "/opt/digital_slide_archive/assetstore", "Mode": "rw", "RW": true, "Propagation": "rprivate" }, { "Type": "bind", "Source": "/home/tele/.dsa/logs", "Destination": "/opt/digital_slide_archive/logs", "Mode": "rw", "RW": true, "Propagation": "rprivate" }, { "Type": "bind", "Source": "/home/tele/.dsa/logs", "Destination": "/opt/logs", "Mode": "rw", "RW": true, "Propagation": "rprivate" }, { "Type": "bind", "Source": "/usr/bin/docker", "Destination": "/usr/bin/docker", "Mode": "", "RW": true, "Propagation": "rprivate" }, { "Type": "bind", "Source": "/var/run/docker.sock", "Destination": "/var/run/docker.sock", "Mode": "", "RW": true, "Propagation": "rprivate" } ], "Config": { "Hostname": "girder", "Domainname": "", "User": "ubuntu", "AttachStdin": false, "AttachStdout": false, "AttachStderr": false, "ExposedPorts": { "8080/tcp": {} }, "Tty": false, "OpenStdin": false, "StdinOnce": false, "Env": [ "HOST_UID=1000", "HOST_GID=1000", "GIRDER_WORKER_TMP_ROOT=/tmp/girder_worker", "GIRDER_WORKER_CONCURRENCY", "HOST_DOCKER_GID=129", "PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin", "LANG=en_US.UTF-8", "GIRDER_EXEC_USER=ubuntu" ], "Cmd": [ "/bin/sh", "-c", "sudo -E python /opt/digital_slide_archive/set_environment.py ubuntu && sudo -E sysctl -w net.ipv4.conf.eth0.route_localnet=1 && sudo -E iptables -t nat -A OUTPUT -o lo -p tcp -m tcp --dport 27017 -j DNAT --to-destination `dig +short mongodb`:27017 && sudo -E iptables -t nat -A POSTROUTING -o eth0 -m addrtype --src-type LOCAL --dst-type UNICAST -j MASQUERADE && sudo -E su ubuntu -c '/home/ubuntu/.virtualenvs/girder/bin/pip install -e /opt/HistomicsUI' ; sudo -E su ubuntu -c 'pushd /opt/slicer_cli_web; /home/ubuntu/.virtualenvs/girder/bin/pip install -e .[girder]; popd' ; sudo -E su ubuntu -c 'pushd /opt/girder; /home/ubuntu/.virtualenvs/girder/bin/pip install -e .[mount]; popd' ; sudo -E su ubuntu -c 'PYTHONUNBUFFERED=true PATH=\"/home/ubuntu/.virtualenvs/girder/bin:$PATH\" girder mount /opt/digital_slide_archive/mount >/opt/logs/mount.log 2>&1' ; sudo -E su ubuntu -c 'PYTHONUNBUFFERED=true PATH=\"/home/ubuntu/.virtualenvs/girder/bin:$PATH\" girder serve --dev >/opt/logs/girder.log 2>&1'" ], "ArgsEscaped": true, "Image": "dsarchive/dsa_girder:latest", "Volumes": null, "WorkingDir": "/opt/HistomicsUI", "Entrypoint": null, "OnBuild": null, "Labels": { "maintainer": "Kitware, Inc. " } }, "NetworkSettings": { "Bridge": "", "SandboxID": "dc2ccc919edd5fab2778467ec2f7d77f3aca6a89e05ae4186f9c4ed2f24d124b", "HairpinMode": false, "LinkLocalIPv6Address": "", "LinkLocalIPv6PrefixLen": 0, "Ports": { "8080/tcp": [ { "HostIp": "0.0.0.0", "HostPort": "8080" } ] }, "SandboxKey": "/var/run/docker/netns/dc2ccc919edd", "SecondaryIPAddresses": null, "SecondaryIPv6Addresses": null, "EndpointID": "", "Gateway": "", "GlobalIPv6Address": "", "GlobalIPv6PrefixLen": 0, "IPAddress": "", "IPPrefixLen": 0, "IPv6Gateway": "", "MacAddress": "", "Networks": { "dsa": { "IPAMConfig": null, "Links": null, "Aliases": [ "girder", "b11c1a64d293" ], "NetworkID": "36dc7d8050a89015f3f8aa6ff57fc4d431dbda9c0fe8c9b8d3a8a11f842cf9ce", "EndpointID": "c643cf78078bbfcf8a1af0e552e3c5b1f73f6012748d1980f1bfb33906fedd51", "Gateway": "172.18.0.1", "IPAddress": "172.18.0.6", "IPPrefixLen": 16, "IPv6Gateway": "", "GlobalIPv6Address": "", "GlobalIPv6PrefixLen": 0, "MacAddress": "02:42:ac:12:00:06", "DriverOpts": null } } } } ]