# ============================================================================
# Config file for RevComp pipeline
# ==========================================[ Sections for the users ]========
#
# One of input_directory, input_pattern and input_samples must be provided
# If input_directory provided, use it otherwise if input_pattern provided,
# use it, otherwise use input_samples.
# ============================================================================


input_directory: ''
input_readtag: _R[12]_
input_pattern: '*.fastq.gz'

apptainers:
  seqtk: "https://zenodo.org/record/5729951/files/seqtk_1.3.0.img" 


##############################################################################
# Revcomp section
#
# :Parameters:
#
revcomp:
    options: ''
    threads: 4