drwxr-xr-x root/root usr/ drwxr-xr-x root/root usr/lib/ drwxr-xr-x root/root usr/lib/python3.10/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Affy/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Affy/CelFile.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Affy/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Affy/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Affy/__pycache__/CelFile.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Affy/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/AlignInfo.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_ClustalOmega.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_Clustalw.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_Dialign.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_MSAProbs.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_Mafft.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_Muscle.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_Prank.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_Probcons.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/_TCoffee.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_ClustalOmega.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_Clustalw.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_Dialign.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_MSAProbs.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_Mafft.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_Muscle.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_Prank.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_Probcons.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/_TCoffee.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/Applications/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/AlignInfo.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/a2m.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/analysis.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/bed.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/bigbed.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/bigmaf.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/bigpsl.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/chain.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/clustal.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/emboss.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/exonerate.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/fasta.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/hhr.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/interfaces.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/maf.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/mauve.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/msf.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/nexus.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/phylip.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/psl.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/sam.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/stockholm.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/__pycache__/tabular.cpython-310.pyc -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/_codonaligner.c -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/_codonaligner.cpython-310-x86_64-linux-gnu.so -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/_pairwisealigner.c -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/_pairwisealigner.cpython-310-x86_64-linux-gnu.so -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/a2m.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/analysis.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/bed.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/bigbed.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/bigmaf.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/bigpsl.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/chain.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/clustal.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/emboss.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/exonerate.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/fasta.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/hhr.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/interfaces.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/maf.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/mauve.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/msf.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/nexus.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/phylip.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/psl.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/sam.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/stockholm.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/ -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BENNER22 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BENNER6 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BENNER74 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BLASTN -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BLASTP -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BLOSUM45 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BLOSUM50 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BLOSUM62 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BLOSUM80 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/BLOSUM90 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/DAYHOFF -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/FENG -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/GENETIC -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/GONNET1992 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/HOXD70 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/JOHNSON -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/JONES -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/LEVIN -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/MCLACHLAN -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/MDM78 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/MEGABLAST -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/NUC.4.4 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/PAM250 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/PAM30 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/PAM70 -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/RAO -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/RISLER -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/SCHNEIDER -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/STR -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Align/substitution_matrices/data/TRANS -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Align/tabular.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/AlignIO/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/ClustalIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/EmbossIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/FastaIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/Interfaces.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/MafIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/MauveIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/MsfIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/NexusIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/PhylipIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/StockholmIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/ClustalIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/EmbossIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/FastaIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/Interfaces.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/MafIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/MauveIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/MsfIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/NexusIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/PhylipIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/StockholmIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/AlignIO/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Alphabet/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Alphabet/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Alphabet/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Alphabet/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Application/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Application/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Application/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Application/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Blast/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/Applications.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/NCBIWWW.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/NCBIXML.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/Record.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Blast/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/__pycache__/Applications.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/__pycache__/NCBIWWW.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/__pycache__/NCBIXML.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/__pycache__/Record.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Blast/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/CAPS/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/CAPS/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/CAPS/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/CAPS/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Cluster/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Cluster/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Cluster/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Cluster/__pycache__/__init__.cpython-310.pyc -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Cluster/_cluster.cpython-310-x86_64-linux-gnu.so -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Cluster/cluster.c -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Cluster/cluster.h -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Cluster/clustermodule.c drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Compass/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Compass/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Compass/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Compass/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Data/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/CodonTable.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/IUPACData.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/PDBData.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Data/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/__pycache__/CodonTable.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/__pycache__/IUPACData.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/__pycache__/PDBData.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Data/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Emboss/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/Applications.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/Primer3.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/PrimerSearch.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Emboss/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/__pycache__/Applications.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/__pycache__/Primer3.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/__pycache__/PrimerSearch.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Emboss/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Entrez/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/ -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/BITS-embedded-index2.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/BITS-question-answer2.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_0.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_1.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_2.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_3.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_4.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/EMBL_General.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/EMBL_General.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/GenBank_General.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/GenBank_General.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/HomoloGene.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/HomoloGene.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-chars1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-common1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-display1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-format1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-funding1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-link1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-list1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-math1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-modules1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-notat1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-para1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-phrase1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-references1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-related-object1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-section1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB_Features.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Access.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Biblio.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BioSource.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BioTree.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Blast4.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Cdd.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Gene.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_General.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_General.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Medlars.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Medline.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Mim.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Mime.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Organism.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Project.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Protein.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Pub.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_PubMed.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_RNA.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Remap.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Rsite.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqres.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqset.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Sequence.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Submit.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Systems.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_TSeq.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_TxInit.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Variation.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NCBI_all.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NSE.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/NSE.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/OMSSA.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/OMSSA.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/PDB_General.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/PDB_General.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/PIR_General.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/PIR_General.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/PRF_General.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/PRF_General.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/SP_General.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/SP_General.mod.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/XHTMLtablesetup.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/archivearticle.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/archivecustom-classes.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/archivecustom-mixes.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/archivecustom-models.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/archivecustom-modules.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/articlemeta.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/backmatter.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/bookdoc_100301.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/bookdoc_110101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/bookdoc_120101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/bookdoc_130101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/bookdoc_140101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/bookdoc_150101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/chars.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/common.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/default-classes.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/default-mixes.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/display.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/eInfo_020511.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/eLink_090910.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/eLink_101123.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/ePost_020511.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/eSearch_020511.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/eSpell.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/eSummary_041029.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/egquery.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/einfo.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/elink.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/elink_020122.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/epost.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/esearch.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/esummary-v1.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/esummary_gene.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/format.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/htmltable.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isoamsa.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isoamsb.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isoamsc.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isoamsn.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isoamso.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isoamsr.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isobox.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isocyr1.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isocyr2.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isodia.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isogrk1.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isogrk2.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isogrk3.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isogrk4.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isolat1.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isolat2.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isomfrk.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isomopf.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isomscr.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isonum.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isopub.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/isotech.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/journalmeta.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/link.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/list.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/math.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mathml-in-pubmed.mod -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mathml2-qname-1.mod -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mathml2.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mathml3-qname1.mod -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mathml3.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mathmlsetup.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mmlalias.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/mmlextra.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/modules.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmcommon_011101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmcommon_080101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmcommon_090101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedline_011101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedline_080101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedline_090101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmserials_080101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmserials_100101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/notat.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/para.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/phrase.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pmc-1.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_020114.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_080101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_090101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_100101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_100301.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_110101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_120101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_130101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_130501.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_140101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_150101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_180101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_180601.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/pubmed_190101.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/references.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/section.ent -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/taxon.dtd -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/xhtml-table-1.mod -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/DTDs/xmlspecchars.ent -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/Parser.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Entrez/XSDs/ -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/XSDs/IPGReportSet.xsd -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Entrez/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/__pycache__/Parser.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Entrez/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/ExPASy/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/Enzyme.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/Prodoc.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/Prosite.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/ScanProsite.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__pycache__/Enzyme.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__pycache__/Prodoc.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__pycache__/Prosite.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__pycache__/ScanProsite.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/__pycache__/cellosaurus.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/ExPASy/cellosaurus.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/File.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/GenBank/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/Record.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/Scanner.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/GenBank/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/__pycache__/Record.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/__pycache__/Scanner.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/__pycache__/utils.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/GenBank/utils.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Geo/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Geo/Record.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Geo/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Geo/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Geo/__pycache__/Record.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Geo/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Graphics/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/BasicChromosome.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/ColorSpiral.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/Comparative.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/DisplayRepresentation.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/Distribution.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_Colors.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_Diagram.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_Feature.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_Graph.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/_Track.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_AbstractDrawer.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_CircularDrawer.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_Colors.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_CrossLink.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_Diagram.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_Feature.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_FeatureSet.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_Graph.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_GraphSet.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_LinearDrawer.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/_Track.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/GenomeDiagram/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/KGML_vis.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/BasicChromosome.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/ColorSpiral.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/Comparative.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/DisplayRepresentation.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/Distribution.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/KGML_vis.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Graphics/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/HMM/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/DynamicProgramming.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/MarkovModel.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/Trainer.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/Utilities.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/HMM/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/__pycache__/DynamicProgramming.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/__pycache__/MarkovModel.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/__pycache__/Trainer.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/__pycache__/Utilities.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/HMM/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Compound/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Compound/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Compound/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Compound/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Enzyme/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Enzyme/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Enzyme/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Enzyme/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Gene/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Gene/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Gene/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Gene/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/KGML_parser.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/KGML_pathway.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/__pycache__/KGML_parser.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/__pycache__/KGML_pathway.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/KGML/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Map/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Map/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/Map/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/Map/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/REST.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/KEGG/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/__pycache__/REST.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/KEGG/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/LogisticRegression.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/MarkovModel.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/MaxEntropy.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Medline/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Medline/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Medline/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Medline/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/NMR/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/NMR/NOEtools.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/NMR/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/NMR/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/NMR/__pycache__/NOEtools.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/NMR/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/NMR/__pycache__/xpktools.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/NMR/xpktools.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/NaiveBayes.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Nexus/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/Nexus.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/Nodes.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/StandardData.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/Trees.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Nexus/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/__pycache__/Nexus.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/__pycache__/Nodes.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/__pycache__/StandardData.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/__pycache__/Trees.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/__pycache__/__init__.cpython-310.pyc -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/Nexus/cnexus.c -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Nexus/cnexus.cpython-310-x86_64-linux-gnu.so drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PDB/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/AbstractPropertyMap.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Atom.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Chain.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/DSSP.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Dice.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Entity.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/FragmentMapper.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/HSExposure.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/MMCIF2Dict.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/MMCIFParser.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Model.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/NACCESS.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/NeighborSearch.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/PDBExceptions.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/PDBIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/PDBList.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/PDBParser.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/PICIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/PSEA.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Polypeptide.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Residue.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/ResidueDepth.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/SASA.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/SCADIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Selection.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Structure.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/StructureAlignment.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/StructureBuilder.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/Superimposer.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/AbstractPropertyMap.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Atom.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Chain.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/DSSP.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Dice.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Entity.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/FragmentMapper.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/HSExposure.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/MMCIF2Dict.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/MMCIFParser.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Model.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/NACCESS.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/NeighborSearch.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/PDBExceptions.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/PDBIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/PDBList.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/PDBParser.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/PICIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/PSEA.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Polypeptide.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Residue.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/ResidueDepth.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/SASA.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/SCADIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Selection.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Structure.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/StructureAlignment.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/StructureBuilder.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/Superimposer.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/cealign.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/ic_data.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/ic_rebuild.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/internal_coords.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/mmcifio.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/parse_pdb_header.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/qcprot.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/__pycache__/vectors.cpython-310.pyc -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PDB/ccealign.cpython-310-x86_64-linux-gnu.so -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/ccealignmodule.c -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/cealign.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/ic_data.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/ic_rebuild.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/internal_coords.py -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/kdtrees.c -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PDB/kdtrees.cpython-310-x86_64-linux-gnu.so -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/mmcifio.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/DefaultParser.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/__pycache__/DefaultParser.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/__pycache__/mmtfio.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/mmtf/mmtfio.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/parse_pdb_header.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/qcprot.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PDB/vectors.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Pathway/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/Graph.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/MultiGraph.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/__pycache__/Graph.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/__pycache__/MultiGraph.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/Rep/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Pathway/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Pathway/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Phylo/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/_Fasttree.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/_Phyml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/_Raxml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/__pycache__/_Fasttree.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/__pycache__/_Phyml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/__pycache__/_Raxml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Applications/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/BaseTree.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/CDAO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/CDAOIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Consensus.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/NeXML.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/NeXMLIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/Newick.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/NewickIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/NexusIO.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/_paml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/_parse_baseml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/_parse_codeml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/_parse_yn00.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/baseml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/chi2.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/codeml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/__pycache__/yn00.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/_paml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/_parse_baseml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/_parse_codeml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/_parse_yn00.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/baseml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/chi2.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/codeml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PAML/yn00.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PhyloXML.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/PhyloXMLIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/TreeConstruction.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/BaseTree.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/CDAO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/CDAOIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/Consensus.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/NeXML.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/NeXMLIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/Newick.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/NewickIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/NexusIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/PhyloXML.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/PhyloXMLIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/TreeConstruction.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/_cdao_owl.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/_io.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/__pycache__/_utils.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/_cdao_owl.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/_io.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Phylo/_utils.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PopGen/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/Controller.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/EasyController.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/FileParser.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/LargeFileParser.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/__pycache__/Controller.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/__pycache__/EasyController.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/__pycache__/FileParser.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/__pycache__/LargeFileParser.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/GenePop/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/PopGen/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/PopGen/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Restriction/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/PrintFormat.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/Restriction.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/Restriction_Dictionary.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Restriction/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/__pycache__/PrintFormat.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/__pycache__/Restriction.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/__pycache__/Restriction_Dictionary.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Restriction/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SCOP/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/Cla.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/Des.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/Dom.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/Hie.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/Raf.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/Residues.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/Cla.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/Des.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/Dom.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/Hie.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/Raf.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/Residues.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SCOP/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SVDSuperimposer/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SVDSuperimposer/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SVDSuperimposer/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SVDSuperimposer/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/__pycache__/blast_tab.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/__pycache__/blast_xml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/blast_tab.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlastIO/blast_xml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/BlatIO.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/__pycache__/_base.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_cigar.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_text.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_vulgar.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/_base.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/FastaIO.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HHsuiteIO/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HHsuiteIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__/hhsuite2_text.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__pycache__/_base.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__pycache__/hmmer2_text.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_domtab.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_tab.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_text.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/_base.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/InterproscanIO/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/InterproscanIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/InterproscanIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/InterproscanIO/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/InterproscanIO/__pycache__/interproscan_xml.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/__pycache__/BlatIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/__pycache__/FastaIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/__pycache__/_index.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/__pycache__/_utils.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_index.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/__pycache__/_base.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/__pycache__/hit.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/__pycache__/hsp.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/__pycache__/query.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/_base.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/hit.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/hsp.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_model/query.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SearchIO/_utils.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Seq.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqFeature.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SeqIO/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/AbiIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/AceIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/FastaIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/GckIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/IgIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/InsdcIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/Interfaces.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/NibIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/PdbIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/PhdIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/PirIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/QualityIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/SeqXmlIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/SffIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/SnapGeneIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/SwissIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/TabIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/TwoBitIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/UniprotIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/XdnaIO.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/AbiIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/AceIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/FastaIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/GckIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/IgIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/InsdcIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/Interfaces.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/NibIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/PdbIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/PhdIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/PirIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/QualityIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/SeqXmlIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/SffIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/SnapGeneIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/SwissIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/TabIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/TwoBitIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/UniprotIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/XdnaIO.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/__pycache__/_index.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/_index.py -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/SeqIO/_twoBitIO.c -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SeqIO/_twoBitIO.cpython-310-x86_64-linux-gnu.so -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqRecord.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/CheckSum.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/IsoelectricPoint.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/MeltingTemp.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/ProtParam.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/ProtParamData.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/CheckSum.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/IsoelectricPoint.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/MeltingTemp.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/ProtParam.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/ProtParamData.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/__pycache__/lcc.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SeqUtils/lcc.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Sequencing/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Ace.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/_Novoalign.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/__pycache__/_Novoalign.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/__pycache__/_bwa.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/__pycache__/_samtools.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/_bwa.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Applications/_samtools.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/Phd.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/Sequencing/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/__pycache__/Ace.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/__pycache__/Phd.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/Sequencing/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SwissProt/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SwissProt/KeyWList.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SwissProt/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/SwissProt/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SwissProt/__pycache__/KeyWList.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/SwissProt/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/TogoWS/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/TogoWS/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/TogoWS/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/TogoWS/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/UniGene/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/UniGene/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/UniGene/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/UniGene/__pycache__/__init__.cpython-310.pyc drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/UniProt/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/UniProt/GOA.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/UniProt/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/UniProt/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/UniProt/__pycache__/GOA.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/UniProt/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/File.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/LogisticRegression.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/MarkovModel.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/MaxEntropy.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/NaiveBayes.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/Seq.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/SeqFeature.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/SeqRecord.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/_utils.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/bgzf.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/kNN.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/__pycache__/pairwise2.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/_utils.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/bgzf.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/codonalign/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/codonalign/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/codonalign/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/codonalign/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/codonalign/__pycache__/codonalignment.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/codonalign/__pycache__/codonseq.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/codonalign/codonalignment.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/codonalign/codonseq.py -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/cpairwise2.cpython-310-x86_64-linux-gnu.so -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/cpairwise2module.c -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/kNN.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/motifs/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/alignace.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/clusterbuster.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/mast.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/matrix.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/meme.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/minimal.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/pfm.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/thresholds.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/transfac.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/__pycache__/xms.cpython-310.pyc -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/_pwm.c -rwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/motifs/_pwm.cpython-310-x86_64-linux-gnu.so -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/alignace.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/motifs/applications/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/applications/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/motifs/applications/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/applications/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/applications/__pycache__/_xxmotif.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/applications/_xxmotif.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/clusterbuster.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/motifs/jaspar/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/jaspar/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/motifs/jaspar/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/jaspar/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/jaspar/__pycache__/db.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/jaspar/db.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/mast.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/matrix.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/meme.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/minimal.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/pfm.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/thresholds.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/transfac.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/motifs/xms.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/pairwise2.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/phenotype/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/phenotype/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/Bio/phenotype/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/phenotype/__pycache__/__init__.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/phenotype/__pycache__/phen_micro.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/phenotype/__pycache__/pm_fitting.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/phenotype/phen_micro.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/Bio/phenotype/pm_fitting.py -rw-rw-r-- root/root usr/lib/python3.10/site-packages/Bio/py.typed (EMPTY) drwxr-xr-x root/root usr/lib/python3.10/site-packages/BioSQL/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/BioSeq.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/BioSeqDatabase.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/DBUtils.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/Loader.py -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/__init__.py drwxr-xr-x root/root usr/lib/python3.10/site-packages/BioSQL/__pycache__/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/__pycache__/BioSeq.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/__pycache__/BioSeqDatabase.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/__pycache__/DBUtils.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/__pycache__/Loader.cpython-310.pyc -rw-r--r-- root/root usr/lib/python3.10/site-packages/BioSQL/__pycache__/__init__.cpython-310.pyc -rw-rw-r-- root/root usr/lib/python3.10/site-packages/BioSQL/py.typed (EMPTY) drwxr-xr-x root/root usr/lib/python3.10/site-packages/biopython-1.83-py3.10.egg-info/ -rw-r--r-- root/root usr/lib/python3.10/site-packages/biopython-1.83-py3.10.egg-info/PKG-INFO -rw-rw-r-- root/root usr/lib/python3.10/site-packages/biopython-1.83-py3.10.egg-info/SOURCES.txt -rw-rw-r-- root/root usr/lib/python3.10/site-packages/biopython-1.83-py3.10.egg-info/dependency_links.txt -rw-rw-r-- root/root usr/lib/python3.10/site-packages/biopython-1.83-py3.10.egg-info/requires.txt -rw-rw-r-- root/root usr/lib/python3.10/site-packages/biopython-1.83-py3.10.egg-info/top_level.txt