# Description: A quality control tool for high throughput sequence data
# URL: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
# Maintainer: Petar Petrov, slackalaxy at gmail dot com
# Depends on: adoptium11-jdk

name=fastqc
version=0.12.1
release=1
source=(http://www.bioinformatics.babraham.ac.uk/projects/fastqc/${name}_v${version}.zip
	$name.desktop $name.png)

build() {
	cd FastQC
	install -D -m755 $name $PKG/usr/lib/$name/$name
	
	cp -a Configuration net org Templates Help uk *.jar $PKG/usr/lib/$name
	
	mkdir -p $PKG/usr/bin
	cd $PKG/usr/bin
	ln -s ../lib/$name/$name .
	
	# Menu item and icon
	mkdir -p $PKG/usr/share/{applications,pixmaps}
	cp $SRC/$name.desktop $PKG/usr/share/applications
	cp $SRC/$name.png $PKG/usr/share/pixmaps
}