# Description: BLAST: Basic Local Alignment Search Tool # URL: ftp://ftp.ncbi.nih.gov/blast/executables/legacy.NOTSUPPORTED/ # Maintainer: Petar Petrov, slackalaxy at gmail dot com # Depends on: name=ncbi-blast version=2.2.26 release=2 source=(https://ftp.ncbi.nlm.nih.gov/blast/executables/legacy.NOTSUPPORTED/$version/blast-$version-x64-linux.tar.gz) build() { cd blast-$version # Install the precompiled binaries. Change the name of rpsblast and # seedtop as they are also part of the ncbi-blast+ package. install -D -m755 bin/bl2seq $PKG/usr/bin/bl2seq install -D -m755 bin/blastall $PKG/usr/bin/blastall install -D -m755 bin/blastclust $PKG/usr/bin/blastclust install -D -m755 bin/blastpgp $PKG/usr/bin/blastpgp install -D -m755 bin/copymat $PKG/usr/bin/copymat install -D -m755 bin/fastacmd $PKG/usr/bin/fastacmd install -D -m755 bin/formatdb $PKG/usr/bin/formatdb install -D -m755 bin/formatrpsdb $PKG/usr/bin/formatrpsdb install -D -m755 bin/impala $PKG/usr/bin/impala install -D -m755 bin/makemat $PKG/usr/bin/makemat install -D -m755 bin/megablast $PKG/usr/bin/megablast install -D -m755 bin/rpsblast $PKG/usr/bin/rpsblast-legacy install -D -m755 bin/seedtop $PKG/usr/bin/seedtop-legacy # Copy data dir mkdir -p $PKG/usr/share/$name cp -a data $PKG/usr/share/$name # This link is expected mkdir -p $PKG/usr/lib cd $PKG/usr/lib ln -s libbz2.so libbz2.so.1 }