# Description: Command line access to Entrez databases
# URL: https://www.ncbi.nlm.nih.gov/books/NBK179288/
# Maintainer: Petar Petrov, slackalaxy at gmail dot com
# Depends on:

name=ncbi-edirect
version=23.4.20250110
release=1
source=(https://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/versions/$version/edirect-$version.tar.gz
	https://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/versions/$version/rchive.Linux.gz
	https://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/versions/$version/transmute.Linux.gz
	https://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/versions/$version/xtract.Linux.gz)

build() {
	cd edirect
	
	# Move these to their proper place
	mkdir -p $PKG/usr/share/edirect
	mv ./{cmd,eutils,help,data} $PKG/usr/share/edirect
	mv readme.pdf $PKG/usr/share/edirect/manual.pdf

	mkdir -p $PKG/usr/lib/edirect
	cp -a extern/* $PKG/usr/lib/edirect
	
	# remove these
	rm -rf ./{CA.pm,cacert.pem,Mozilla-CA.tar.gz,README,LICENSE,extern}
	
	mkdir -p $PKG/usr/bin
	cp -a * $PKG/usr/bin

	gunzip -c $SRC/rchive.Linux.gz > $PKG/usr/bin/rchive.Linux
	gunzip -c $SRC/transmute.Linux.gz > $PKG/usr/bin/transmute.Linux
	gunzip -c $SRC/xtract.Linux.gz > $PKG/usr/bin/xtract.Linux
	chmod 755 $PKG/usr/bin/*
}