# Description: pamlX: the graphical user interface for PAML
# URL: http://abacus.gene.ucl.ac.uk/software/paml.html
# Maintainer: Petar Petrov, slackalaxy at gmail dot com
# Depends on: paml qt4

name=pamlx
version=1.3.1
release=2
source=(https://raw.githubusercontent.com/slackalaxy/sources/main/pamlX${version}-src.tgz
	$name.desktop)

build() {
	cd pamlX${version}-src
	
	# Fix the path where pamlX looks for the paml executables, its config
	# file (if necessary it should be in your home directory) and the
	# manuals installed by paml.
	sed -i 's|QApplication::applicationDirPath()|"/usr"|g' mainwindow.cpp
	sed -i 's|+= "/pamlx.conf"|= "~/.pamlX/pamlx.conf"|g' mainwindow.cpp
	sed -i 's|/doc/|/share/paml/|g' mainwindow.cpp
	sed -i 's|/doc/|/share/paml/|g' pamlhistorydialog.cpp

	# If you want the "Help" menu to use something else than Okular for
	# viewing the PDF documentation, uncomment the appropriate line below
	# (or add your own if you want a viewer not listed here):
	#
	# sed -i 's|okular|xpdf|g' mainwindow.cpp	# Use XPDF
	 sed -i 's|okular|evince|g' mainwindow.cpp	# Use Evince
	# sed -i 's|okular|acroread|g' mainwindow.cpp	# Use Adobe Acrobat Reader
	# sed -i 's|okular|epdfviewer|g' mainwindow.cpp # Use ePDFViewer

	qmake-qt4 \
	QMAKE_CFLAGS="$CFLAGS" \
	QMAKE_CXXFLAGS="$CFLAGS"
	make

	install -D -m755 pamlX $PKG/usr/bin/pamlX
	
	mkdir -p $PKG/usr/share/{applications,pixmaps}
	cp $SRC/$name.desktop $PKG/usr/share/applications
	install -D -m644 pamlxlogo.png $PKG/usr/share/pixmaps/pamlX.png
}