# Description: Fix problems in PDB files in preparation for simulating them
# URL: https://github.com/openmm/pdbfixer/
# Maintainer: Petar Petrov, slackalaxy at gmail dot com
# Depends on: openmm

name=python3-pdbfixer
version=1.10
release=1
source=(https://github.com/openmm/pdbfixer/archive/v${version}/pdbfixer-v${version}.tar.gz
	pdbfixer.desktop pdbfixer.png)

build() {
  cd ${name#*-}-$version

  /usr/bin/python3 setup.py build
  /usr/bin/python3 setup.py install \
                   --prefix=/usr    \
                   --root="$PKG"    \
                   --skip-build     \
                   --optimize=1

  find $PKG \( -iname "README*" -o \
               -iname INSTALLER -o \
               -iname REQUESTED -o \
               -iname "LICENSE*"   \) -delete
  
  mkdir -p $PKG/usr/share/{applications,pixmaps}
  cp -a $SRC/pdbfixer.desktop $PKG/usr/share/applications
  cp -a $SRC/pdbfixer.png $PKG/usr/share/pixmaps
  
  find -L $PKG -perm 664 -exec chmod 644 {} \;

}