# Description: A free open-source bioinformatics software suite
# URL: https://ugene.net/
# Maintainer: Petar Petrov, slackalaxy at gmail dot com
# Depends on: alsa-lib brotli glu graphite2 gtk gtk3 keyutils krb5 libxkbcommon wayland xorg-libxres xorg-xcb-util-image xorg-xcb-util-keysyms xorg-xcb-util-renderutil xorg-xcb-util-wm
# Optional: ncbi-blast-plus clustalo jdk8-bin mafft phyml python3

name=ugene
version=53.1
release=1
source=(https://github.com/ugeneunipro/ugene/releases/download/$version/ugene-$version-linux-x86-64.tar.gz
	$name.desktop)

build() {
	mkdir -p $PKG/usr/lib
	cp -a $name-$version $PKG/usr/lib/$name

	mkdir -p $PKG/usr/bin
	cd $PKG/usr/bin
	ln -s ../lib/$name/$name .
	
	mkdir -p $PKG/usr/share/{applications,pixmaps}
	cp $SRC/$name.desktop $PKG/usr/share/applications
	cp $PKG/usr/lib/$name/$name.png $PKG/usr/share/pixmaps
	
	rm -rf $PKG/usr/lib/ugene/tools/{blast,clustalo,java8,mafft,phyml,python3}
	
	mkdir -p $PKG/etc/revdep.d
	echo '/usr/lib/ugene/tools/samtools/' > $PKG/etc/revdep.d/$name
}