# Description: R module GenomicFeatures # URL: https://bioconductor.org/packages/GenomicFeatures # Maintainer: Petar Petrov, slackalaxy at gmail dot com # Depends on: r r4-annotationdbi r4-biocgenerics r4-biostrings r4-dbi r4-genomeinfodb r4-genomicranges r4-iranges r4-rtracklayer r4-s4vectors r4-xvector # Optional: r4-annotationfilter r4-biocstyle r4-bsgenome r4-bsgenome-celegans-ucsc-ce11 r4-bsgenome-dmelanogaster-ucsc-dm3 r4-bsgenome-hsapiens-ucsc-hg19 r4-ensembldb r4-fdb-ucsc-trnas r4-genomicalignments r4-knitr r4-markdown r4-mirbase-db r4-org-hs-eg-db r4-org-mm-eg-db r4-pasillabamsubset r4-rsamtools r4-runit r4-snplocs-hsapiens-dbsnp144-grch38 r4-txdb-celegans-ucsc-ce11-ensgene r4-txdb-dmelanogaster-ucsc-dm3-ensgene r4-txdb-hsapiens-ucsc-hg19-knowngene r4-txdb-hsapiens-ucsc-hg19-lincrnastranscripts r4-txdb-hsapiens-ucsc-hg38-knowngene r4-txdb-mmusculus-ucsc-mm10-knowngene r4-txdbmaker name=r4-genomicfeatures version=1.56.0 release=1 source=(https://bioconductor.org/packages/3.19/bioc/src/contrib/GenomicFeatures_${version}.tar.gz) build() { cd GenomicFeatures mkdir -p $PKG/usr/lib/R/library R CMD INSTALL . -l $PKG/usr/lib/R/library }