# Description: R module Seurat # URL: https://cran.r-project.org/web/packages/Seurat # Maintainer: Petar Petrov, slackalaxy at gmail dot com # Depends on: r r4-cluster r4-cowplot r4-fastdummies r4-fitdistrplus r4-future r4-future-apply r4-generics r4-ggplot2 r4-ggrepel r4-ggridges r4-httr r4-ica r4-igraph r4-irlba r4-jsonlite r4-kernsmooth r4-leiden r4-lifecycle r4-lmtest r4-mass r4-matrix r4-matrixstats r4-miniui r4-patchwork r4-pbapply r4-plotly r4-png r4-progressr r4-purrr r4-rann r4-rcolorbrewer r4-rcpp r4-rcppannoy r4-rcppeigen r4-rcpphnsw r4-rcppprogress r4-reticulate r4-rlang r4-rocr r4-rspectra r4-rtsne r4-scales r4-scattermore r4-sctransform r4-seuratobject r4-shiny r4-spatstat-explore r4-spatstat-geom r4-tibble r4-uwot # Optional: r4-ape r4-biobase r4-biocgenerics r4-data-table r4-delayedarray r4-deseq2 r4-enrichr r4-genomeinfodb r4-genomicranges r4-ggrastr r4-harmony r4-hdf5r r4-iranges r4-limma r4-mast r4-metap r4-mixtools r4-monocle r4-r-utils r4-rfast2 r4-rsvd r4-rtracklayer r4-s4vectors r4-singlecellexperiment r4-summarizedexperiment r4-testthat r4-vgam name=r4-seurat version=5.0.3 release=1 source=(https://cloud.r-project.org/src/contrib/Seurat_${version}.tar.gz) build() { cd Seurat mkdir -p $PKG/usr/lib/R/library R CMD INSTALL . -l $PKG/usr/lib/R/library }