@prefix JAX: .
@prefix partOf: .
@prefix MMRRC: .
@prefix PR: .
@prefix mmset4: .
@prefix owl: .
@prefix NIFSTD: .
@prefix ilxtr: .
@prefix NIFEXT: .
@prefix PATO: .
@prefix skos: .
@prefix BFO: .
@prefix ns1: .
@prefix kidney: .
@prefix ns2: .
@prefix ILX: .
@prefix CHEBI: .
@prefix ns3: .
@prefix semves: .
@prefix UBERON: .
@prefix overlaps: .
@prefix dcterms: .
@prefix mmset1: .
@prefix NIFRID: .
@prefix foaf: .
@prefix ilxcr: .
@prefix AIBSSPEC: .
@prefix femrep: .
@prefix NLXMOL: .
@prefix hasPart: .
@prefix liver: .
@prefix altTerm: .
@prefix ns4: .
@prefix PTHR: .
@prefix IAO: .
@prefix senmot: .
@prefix NLXANAT: .
@prefix hasRole: .
@prefix RO: .
@prefix AIBSTL: .
@prefix doi: .
@prefix SAO: .
@prefix stardog: .
@prefix defSource: .
@prefix ns5: .
@prefix swglnd: .
@prefix npokb: .
@prefix editorNote: .
@prefix TEMPIND: .
@prefix xsd: .
@prefix BIRNLEX: .
@prefix rdfs: .
@prefix MBA: .
@prefix importedFrom: .
@prefix NLXNEURNT: .
@prefix NCBIGene: .
@prefix ns6: .
@prefix doap: .
@prefix OBI: .
@prefix definition: .
@prefix FMA: .
@prefix NLX: .
@prefix so: .
@prefix SO: .
@prefix curatorNote: .
@prefix NLXWIKI: .
@prefix prov: .
@prefix PAXRAT: .
@prefix hasMember: .
@prefix ilxr: .
@prefix NCBITaxon: .
@prefix NLXCELL: .
@prefix ns7: .
@prefix mmset2cn: .
@prefix rdf: .
@prefix prostate: .
@prefix atom: .
@prefix termEditor: .
@prefix MIRO: .
@prefix PMID: .
@prefix dc: .
a owl:Ontology ;
rdfs:label "The Neuron Phenotype Ontology" ;
dc:title "The Neuron Phenotype Ontology" ;
dc:description "An ontology of neuron types based on the phenotypic dimensions of cells that can be measure experimentally." ;
owl:versionInfo "2025-11-10" ;
dc:contributor "Bernard de Bono - https://orcid.org/0000-0003-0638-5274" , "Fahim Imam - https://orcid.org/0000-0003-4752-543X" , "Ilias Ziogas - https://orcid.org/0000-0002-9210-2455" , "Jyl Boline - https://orcid.org/0000-0001-5232-8364" , "Mohameth François Sy - https://orcid.org/0000-0002-4603-9838" , "Monique Surles-Zeigler - https://orcid.org/0000-0002-2308-8813" , "Shreejoy Tripathy - https://orcid.org/0000-0002-1007-9061" , "Susan Tappan - https://orcid.org/0000-0001-5120-3770" ;
dc:creator "Maryann Martone - https://orcid.org/0000-0002-8406-3871" , "Sean Hill - https://orcid.org/0000-0001-8055-860X" , "Tom Gillespie - https://orcid.org/0000-0002-7509-4801" ;
dcterms:license ;
doap:audience "researchers working on cell types and their phenotypes, whether they are collecting raw data, organizing existing data, or creating simulations of cell types" ;
doap:bug-database ;
doap:GitRepository ;
ilxtr:imports , , , ;
ilxtr:indexNamespace npokb: ;
MIRO:axiom_patterns , ;
MIRO:competition ;
MIRO:dereferenceable_iris "`npokb:' and `ilxtr:' identifiers are not currently dereferenceable, but they are planned to be." ;
MIRO:development_community ;
MIRO:development_environment "Protégé, FaCT++, ELK, python, pyontutils, neurondm" ;
MIRO:entity_deprecation_strategy "Specific ontology ids are never deprecated. If you need to know whether the modeling of a class has changed, neurondm can be used to regenerate the deterministic identifiers that appear as `ilxtr:hasTemporaryId'." ;
MIRO:entity_metadata_policy "`rdfs:label' must be present. `skos:prefLabel' must be present for common usage types, and should be present when possible for evidence based models. Since the constituent ontology files that make up the npo are generated using python, provenance is primarily stored in the git repository pointed to via the `prov:wasGeneratedBy' predicate in the `owl:Ontology' header for individual files, in this case that repository is `'" ;
MIRO:entity_naming_convention "`rdfs:label' must be automatically generated using neurondm. Labels are generated from the labels of the constituent phenotype values. Only restrictions specifying necessary criteria for defining the type (i.e. those that are contained in an `owl:equivalentClass' statement) are included when generating the name. The ordering of the dimensions is specified in https://github.com/tgbugs/pyontutils/blob/a5e9fcc70d56870e692c17cb7fadce735a281d02/neurondm/neurondm/core.py#L135-L389" ;
MIRO:evaluation "No external evaluation has been conducted. See https://doi.org/10.1007/s12021-022-09566-7" ;
MIRO:example_of_use ;
MIRO:identifier_generation_policy "`npokb:[0-9]+' identifiers are assigned sequentially via https://github.com/tgbugs/pyontutils/blob/a5e9fcc70d56870e692c17cb7fadce735a281d02/nifstd/nifstd_tools/map-identifiers.py#L20-L49. An index of issued identifiers is retained at https://github.com/SciCrunch/NIF-Ontology/blob/dev-sckan/ttl/generated/neurons/npokb-index.ttl. Note that the current implementation currently does not correctly handles cases where the constituent phenotypes of a class change." ;
MIRO:knowledge_acquisition_methodology ;
MIRO:knowledge_representation_language ;
MIRO:methodological_framework ;
MIRO:need "There is a need to bridge the gap between historical definitions of cell types from the literature, with cell types being defined using a wide variety of new techniques. There is also a need to be able to bridge and reconcile the wide variety of local terminology used across laboratories and place them on more solid foundations derived from the methodology used to make measurements on cells." ;
MIRO:scope_and_coverage "Scope: neuron types, and the dimensions and values of their constituent phenotypes. Coverage: an inventory of common usage types from existing sources, as well as three examples of evidence based models of cell types from recent publications." ;
MIRO:source_knowledge_location ;
MIRO:sustainability_plan "The npo is maintained as part of the NIF-Ontology." ;
MIRO:testing "See `MIRO:axiom_patterns' and paper https://doi.org/10.1007/s12021-022-09566-7" ;
MIRO:versioning_policy "Development versions of the ontology are released continuously and are identified by their git commit hashes. Stable versions are released periodically and can be accessed by their git tag." ;
prov:wasGeneratedBy , .
dc:title a owl:AnnotationProperty .
dc:description a owl:AnnotationProperty .
dc:contributor a owl:AnnotationProperty .
dc:creator a owl:AnnotationProperty .
dcterms:license a owl:AnnotationProperty .
doap:audience a owl:AnnotationProperty .
doap:bug-database a owl:AnnotationProperty .
doap:GitRepository a owl:AnnotationProperty .
ilxtr:imports a owl:AnnotationProperty .
a ilxtr:Ontology ;
dc:contributor "Alan Ruttenberg" , "Albert Goldfain" , "Barry Smith" , "Bill Duncan" , "Bjoern Peters" , "Chris Mungall" , "David Osumi-Sutherland" , "Fabian Neuhaus" , "Holger Stenzhorn" , "James A. Overton" , "Janna Hastings" , "Jie Zheng" , "Jonathan Bona" , "Larry Hunter" , "Leonard Jacuzzo" , "Ludger Jansen" , "Mark Ressler" , "Mathias Brochhausen" , "Mauricio Almeida" , "Melanie Courtot" , "Pierre Grenon" , "Randall Dipert" , "Ron Rudnicki" , "Selja Seppälä" , "Stefan Schulz" , "Thomas Bittner" , "Werner Ceusters" , "Yongqun \"Oliver\" He" ;
dcterms:license ;
rdfs:comment "Please see the project site https://github.com/BFO-ontology/BFO, the bfo2 owl discussion group http://groups.google.com/group/bfo-owl-devel, the bfo2 discussion group http://groups.google.com/group/bfo-devel, the tracking google doc http://goo.gl/IlrEE, and the current version of the bfo2 reference http://purl.obolibrary.org/obo/bfo/dev/bfo2-reference.docx. This ontology is generated from a specification at https://github.com/BFO-ontology/BFO/tree/master/src/ontology/owl-group/specification/ and with the code that generates the OWL version in https://github.com/BFO-ontology/BFO/tree/master/src/tools/. A very early version of BFO version 2 in CLIF is at http://purl.obolibrary.org/obo/bfo/dev/bfo.clif."@en , "The BSD license on the BFO project site refers to code used to build BFO."@en , "This BFO 2.0 version represents a major update to BFO and is not strictly backwards compatible with BFO 1.1. The previous OWL version of BFO, version 1.1.1 will remain available at http://ifomis.org/bfo/1.1 and will no longer be updated. The BFO 2.0 OWL is a classes-only specification. The incorporation of core relations has been held over for a later version." ;
rdfs:isDefinedBy , ;
IAO:0000116 "BFO 2 Reference: BFO does not claim to provide complete coverage of entities of all types. It seeks only to provide coverage of those entities studied by empirical science together with those entities which affect or are involved in human activities such as data processing and planning - coverage that is sufficiently broad to provide assistance to those engaged in building domain ontologies for purposes of data annotation."@en , "BFO 2 Reference: BFO's treatment of continuants and occurrents - as also its treatment of regions, rests on a dichotomy between space and time, and on the view that there are two perspectives on reality - earlier called the 'SNAP' and 'SPAN' perspectives, both of which are essential to the non-reductionist representation of reality as we understand it from the best available science." , "BFO 2 Reference: For both terms and relational expressions in BFO, we distinguish between primitive and defined. 'Entity' is an example of a primitive term. Primitive terms in a highest-level ontology such as BFO are terms that are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms." ;
foaf:homepage , , ;
foaf:mbox ;
rdfs:seeAlso , , , , ;
owl:versionIRI .
a ilxtr:Ontology ;
rdfs:label "Custom Neuron Bridge for SCKAN" ;
owl:versionInfo "2025-11-06" ;
ilxtr:imports , , , , , , ;
prov:wasGeneratedBy ;
rdfs:comment "Custom bridge for importing specific neuron TTL files for SCKAN." .
ilxtr:indexNamespace a owl:AnnotationProperty .
MIRO:axiom_patterns a owl:AnnotationProperty .
MIRO:competition a owl:AnnotationProperty .
MIRO:dereferenceable_iris a owl:AnnotationProperty .
MIRO:development_community a owl:AnnotationProperty .
MIRO:development_environment a owl:AnnotationProperty .
MIRO:entity_deprecation_strategy a owl:AnnotationProperty .
MIRO:entity_metadata_policy a owl:AnnotationProperty .
MIRO:entity_naming_convention a owl:AnnotationProperty .
MIRO:evaluation a owl:AnnotationProperty .
MIRO:example_of_use a owl:AnnotationProperty .
MIRO:identifier_generation_policy a owl:AnnotationProperty .
MIRO:knowledge_acquisition_methodology a owl:AnnotationProperty .
MIRO:knowledge_representation_language a owl:AnnotationProperty .
MIRO:methodological_framework a owl:AnnotationProperty .
MIRO:need a owl:AnnotationProperty .
MIRO:scope_and_coverage a owl:AnnotationProperty .
MIRO:source_knowledge_location a owl:AnnotationProperty .
MIRO:sustainability_plan a owl:AnnotationProperty .
MIRO:testing a owl:AnnotationProperty .
MIRO:versioning_policy a owl:AnnotationProperty .
prov:wasGeneratedBy a owl:AnnotationProperty .
atom:annotates a owl:ObjectProperty ;
rdfs:label "annotates" ;
NIFRID:synonym "isAnchoredTo" , "isCoordinatedTo" ;
rdfs:domain atom:Annotation ;
rdfs:range atom:Space ;
ilxtr:hasIlxId ILX:0778137 .
atom:Annotation a owl:Class ;
rdfs:label "parcellation annotation" ;
NIFRID:synonym "atlas annotation" ;
rdfs:subClassOf atom:Artifact , _:anon-genid-23dc662664fc4769bf28029f4af71604-17 , ilxtr:parcellationArtifact ;
ilxtr:localName "annotation" .
atom:Space a owl:Class ;
rdfs:label "anatomical space" ;
NIFRID:synonym "anatomical coordinate space" , "atlas space" , "common coordinate space" , "parameterized coordinate space" , "physical space" ;
ilxtr:hasIlxId ILX:0777106 ;
IAO:0000115 "An anatomical space is a combination of a mathematical space with an anatomical space such that there is a defined mapping between the anatomical axes and the mathematical axes. A mathematical coordinate space by itself is NOT an anatomical space because it admits all possible orientations and reflections of the anatomical space, so for example a brain can be rotated in all directions and still be in that mathematical coordinate space. Such spaces are called unoriented spaces and are a source of significant pain when dealing with anatomical datasets." ;
IAO:0000116 "To avoid problems like those encountered by nifti an anatomical reference space MUST define an anatomical axis alignment vector which states, for example, [X, Y, Z] -> [R, A, D] (left hand rule). This immediately indicates the three annotations required on any unoriented dataset as opposed to someone trying to apply the anatomical directions directly to the unoriented dataset" ;
rdfs:subClassOf atom:Space , atom:Artifact , ilxtr:parcellationArtifact , _:anon-genid-23dc662664fc4769bf28029f4af71604-155 , _:anon-genid-23dc662664fc4769bf28029f4af71604-156 , _:anon-genid-23dc662664fc4769bf28029f4af71604-157 , _:anon-genid-23dc662664fc4769bf28029f4af71604-158 ;
ilxtr:localName "space" .
atom:hasResolution a owl:ObjectProperty ;
rdfs:label "hasResolution" ;
rdfs:domain atom:Data ;
rdfs:range atom:Resolution ;
ilxtr:hasIlxId ILX:0778134 .
atom:Data a owl:Class ;
rdfs:label "anatomical data" ;
IAO:0000115 "Some specialized data that is about some organism." ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact , _:anon-genid-23dc662664fc4769bf28029f4af71604-120 , _:anon-genid-23dc662664fc4769bf28029f4af71604-121 , _:anon-genid-23dc662664fc4769bf28029f4af71604-122 ;
ilxtr:localName "data" .
atom:Resolution a owl:Class ;
rdfs:label "resolution" ;
rdfs:subClassOf atom:Vector , _:anon-genid-23dc662664fc4769bf28029f4af71604-147 , _:anon-genid-23dc662664fc4769bf28029f4af71604-148 , _:anon-genid-23dc662664fc4769bf28029f4af71604-149 , _:anon-genid-23dc662664fc4769bf28029f4af71604-150 ;
ilxtr:localName "resolution" .
atom:hasSpace a owl:ObjectProperty ;
rdfs:label "hasSpace" ;
rdfs:domain atom:Data ;
rdfs:range atom:Space ;
ilxtr:hasIlxId ILX:0778135 .
atom:hasUnit a owl:ObjectProperty ;
rdfs:label "hasUnit" ;
ilxtr:hasIlxId ILX:0778136 .
atom:isMeasurementOf a owl:ObjectProperty ;
rdfs:label "isMeasurementOf" ;
rdfs:domain atom:Data .
atom:names a owl:ObjectProperty ;
rdfs:label "names" ;
rdfs:domain atom:Region ;
rdfs:range atom:Annotation ;
ilxtr:hasIlxId ILX:0778133 .
atom:Region a owl:Class ;
rdfs:label "parcellation region" ;
NIFRID:synonym "atlas region" , "Parcellation Region" ;
skos:definition "Parcellation regions are 'anatomical entities' that correspond to some part of a real biological system and are equivalent to an intersection between a parcellation label and a specific version of an atlas that defines or uses that label and that provides a definitive (0, 1, or probabilistic) way to determine whether a particular sample corresponds to any given region. " ;
rdfs:subClassOf ilxtr:parcellationLabel , atom:Label , _:anon-genid-23dc662664fc4769bf28029f4af71604-145 ;
ilxtr:localName "region" .
atom:transforms a owl:ObjectProperty ;
rdfs:label "transforms" ;
rdfs:domain atom:TransformationRule ;
rdfs:range atom:Space .
atom:TransformationRule a owl:Class ;
rdfs:label "transformation rule" ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact , _:anon-genid-23dc662664fc4769bf28029f4af71604-162 ;
ilxtr:localName "transformation rule" .
BFO:0000051 a owl:ObjectProperty , owl:TransitiveProperty ;
rdfs:label "has part" ;
rdfs:subPropertyOf overlaps: .
overlaps: rdfs:label "overlaps" .
ILX:0112785 a owl:ObjectProperty , owl:Class ;
rdfs:label "Is part of" ;
ilxtr:hasIlxId ILX:0112785 ;
rdfs:subPropertyOf partOf: ;
IAO:0000115 "Generic partonomy relationship; does not distinguish among subtypes" ;
ilxr:type ns6:relationship ;
ilxtr:hasExistingId ILX:0112785 ;
ilxtr:hasIlxPreferredId ILX:0112785 .
owl:Class a owl:Class .
IAO:0000115 a owl:AnnotationProperty ;
rdfs:label "definition" , "definition"@en ;
rdfs:isDefinedBy .
partOf: a owl:ObjectProperty , owl:TransitiveProperty ;
rdfs:label "part of" ;
rdfs:subPropertyOf overlaps: ;
owl:inverseOf BFO:0000051 .
ilxtr:hasAnatomicalSystemPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasAnatomicalSystemPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and some anatomical criteria, such as being located in a particular system. Note that this NOT a subPropertOf hasLocationPhenotype." ;
rdfs:comment "This is used to differentiate things like parasympathetic preganglionic from raw hasPhenotype. This can be used in cases where the meaning is clear to the domain experts, but has not been fully formalized." .
ilxtr:hasPhenotype a owl:ObjectProperty ;
rdfs:label "hasPhenotype" ;
owl:inverseOf ilxtr:phenotypeOf .
ilxtr:hasAxonLeadingToSensorySubcellularElementIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasAxonLeadingToSensorySubcellularElementIn" ;
rdfs:subPropertyOf ilxtr:hasAxonLocatedIn ;
rdfs:comment "a weak property that only asserts that distally there is expected to be at least one case of a hasAxonSensorySubcellularElementIn region in the partial order" .
ilxtr:hasAxonLocatedIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasAxonLocatedIn" ;
rdfs:subPropertyOf ilxtr:hasProcessLocatedIn .
ilxtr:hasProcessLocatedIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasProcessLocatedIn" ;
rdfs:subPropertyOf ilxtr:hasLocationPhenotype .
ilxtr:hasAxonMorphologicalPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasAxonMorphologicalPhenotype" ;
rdfs:subPropertyOf ilxtr:hasMorphologicalPhenotype ;
rdfs:comment "not clear whether this should be subPropertyOf hasMorphologicalPhenotype" .
ilxtr:hasMorphologicalPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasMorphologicalPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a morphological phenotype concept. This should be used when a neuron type is described using a high level morphological concept class." .
ilxtr:hasAxonPhenotype a owl:ObjectProperty ;
rdfs:label "hasAxonPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and some phenotype of its axon." ;
rdfs:comment "Use to provide clarity about where a generic phenotype is attached in the event that the object is not qualified. The alternative is to precompose the subcompartments e.g. SmallSomaPhenotype and SmallAxonPhenotype." .
ilxtr:hasAxonPresynapticElementIn a owl:ObjectProperty ;
rdfs:label "hasAxonPresynapticElementIn" ;
rdfs:subPropertyOf ilxtr:hasAxonLocatedIn , ilxtr:hasPresynapticElementIn .
ilxtr:hasPresynapticElementIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasPresynapticElementIn" ;
rdfs:subPropertyOf ilxtr:hasProcessLocatedIn ;
rdfs:comment "DO NOT USE, AMBIGUOUS! projectsTo does not work because of dendrodentritic synapses, for the same reason this cannot be a subProperty of hasAxonLocatedIn" .
ilxtr:hasAxonSensorySubcellularElementIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasAxonSensorySubcellularElementIn" ;
rdfs:subPropertyOf ilxtr:hasAxonLeadingToSensorySubcellularElementIn , ilxtr:hasSensorySubcellularElementIn .
ilxtr:hasSensorySubcellularElementIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasSensorySubcellularElementIn" ;
rdfs:subPropertyOf ilxtr:hasLocationPhenotype ;
skos:definition "Expresses a relationship between a neuron and a nervous system region where that neuron has a part which is involved in the direct detection of sensory stimuli." ;
rdfs:comment "This is the equivalent of axon terminals for sensory dendrites in the peripheral nervous system. Not 100% sure on the modeling, but some mechanosensory neurons this would be the anatomcal region(s) where the Pacinian corpuscle are located." .
ilxtr:hasBiologicalSex a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasBiologicalSex" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a biological sex. This should be used when a neuron type has been observed in a specific sex." .
ilxtr:hasCircuitRolePhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasCircuitRolePhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
rdfs:comment "needs work" .
ilxtr:hasClassificationPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasClassificationPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and an opaque symbol that is used by experts to distinguish subtypes." ;
rdfs:comment "Use this when numbers or letters have been assigned to disambiguate naming." .
ilxtr:hasComputedMolecularPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasComputedMolecularPhenotype" ;
rdfs:subPropertyOf ilxtr:hasComputedPhenotype , ilxtr:hasMolecularPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a type computed from only molecular data." .
ilxtr:hasComputedPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasComputedPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a type computed from some combination of primary data types." .
ilxtr:hasMolecularPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasMolecularPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a molecule type, a gene type, or a gene product type." ;
rdfs:comment "This can be used for detection of the molecule or gene by any means." .
ilxtr:hasComputedMolecularPhenotypeFromDNA a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasComputedMolecularPhenotypeFromDNA" ;
rdfs:subPropertyOf ilxtr:hasComputedMolecularPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a type computed from only DNA data (e.g. epigenetics data)." .
ilxtr:hasComputedMolecularPhenotypeFromProtein a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasComputedMolecularPhenotypeFromProtein" ;
rdfs:subPropertyOf ilxtr:hasComputedMolecularPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a type computed from only Protein expression data." .
ilxtr:hasComputedMolecularPhenotypeFromRNA a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasComputedMolecularPhenotypeFromRNA" ;
rdfs:subPropertyOf ilxtr:hasComputedMolecularPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a type computed from only RNA expression data." .
ilxtr:hasConnectionDeterminedByCellFilling a owl:ObjectProperty ;
rdfs:label "hasConnectionDeterminedByCellFilling" ;
rdfs:subPropertyOf ilxtr:hasForwardConnectionPhenotype .
ilxtr:hasForwardConnectionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasForwardConnectionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasConnectionPhenotype ;
rdfs:comment "can be inferred from symmetric connection + projects to" ;
owl:inverseOf ilxtr:hasReverseConnectionPhenotype .
ilxtr:hasConnectionDeterminedByElectronMicroscopy a owl:ObjectProperty ;
rdfs:label "hasConnectionDeterminedByElectronMicroscopy" ;
rdfs:subPropertyOf ilxtr:hasForwardConnectionPhenotype ;
rdfs:comment "traditionally harder to get granular types here?" .
ilxtr:hasConnectionDeterminedByElectrophysiology a owl:ObjectProperty ;
rdfs:label "hasConnectionDeterminedByElectrophysiology" ;
rdfs:subPropertyOf ilxtr:hasForwardConnectionPhenotype ;
rdfs:comment "anything from estim to in vitro slice" .
ilxtr:hasConnectionDeterminedByPharmacology a owl:ObjectProperty ;
rdfs:label "hasConnectionDeterminedByPharmacology" ;
rdfs:subPropertyOf ilxtr:hasConnectionDeterminedByElectrophysiology ;
rdfs:comment "specificity of connections often require pharm" .
ilxtr:hasConnectionDeterminedBySynapticPhysiology a owl:ObjectProperty ;
rdfs:label "hasConnectionDeterminedBySynapticPhysiology" ;
rdfs:subPropertyOf ilxtr:hasConnectionDeterminedByElectrophysiology ;
rdfs:comment "ephys or ca2+" .
ilxtr:hasConnectionDeterminedByViralTracing a owl:ObjectProperty ;
rdfs:label "hasConnectionDeterminedByViralTracing" ;
rdfs:subPropertyOf ilxtr:hasForwardConnectionPhenotype ;
rdfs:comment "transsynaptic?" .
ilxtr:hasConnectionPhenotype a owl:ObjectProperty , owl:SymmetricProperty ;
rdfs:label "hasConnectionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a neuron type or a neuron type and a subcompartment of a neuron type some members are connected with eachother." ;
rdfs:comment "Absent a specific subcompartment we can only infer hasProjectionPhenotype at the granularity of soma + dendrite location. NOTE: This relationship does not imply direction. If you need direction please choose a subproperty." .
ilxtr:hasDendriteLocatedIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasDendriteLocatedIn" ;
rdfs:subPropertyOf ilxtr:hasProcessLocatedIn .
ilxtr:hasDendriteMorphologicalPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasDendriteMorphologicalPhenotype" ;
rdfs:subPropertyOf ilxtr:hasMorphologicalPhenotype ;
skos:definition "Expresses a relationship between a neuron and a dendrite phenotype. This should be used when a neuron type is described by the morphology of its dendrites." ;
rdfs:comment "not clear whether this should be subPropertyOf hasMorphologicalPhenotype" .
ilxtr:hasDendritePhenotype a owl:ObjectProperty ;
rdfs:label "hasDendritePhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and some phenotype of its dendrite." ;
rdfs:comment "Use to provide clarity about where a generic phenotype is attached in the event that the object is not qualified. The alternative is to precompose the subcompartments e.g. SmallSomaPhenotype and SmallAxonPhenotype." .
ilxtr:hasDendriteSensorySubcellularElementIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasDendriteSensorySubcellularElementIn" ;
rdfs:subPropertyOf ilxtr:hasSensorySubcellularElementIn , ilxtr:hasDendriteLocatedIn .
ilxtr:hasDevelopmentalStage a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasDevelopmentalStage" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a developmental stage. This should be used when a neuron type has been observed during a developmental stage." .
ilxtr:hasDevelopmentalStructure a owl:ObjectProperty ;
rdfs:label "hasDevelopmentalStructure" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a developmental cell population. This should be used when a neuron develops from an identified developmental anatomical entity." ;
rdfs:comment "needs work" .
ilxtr:hasDevelopmentalType a owl:ObjectProperty ;
rdfs:label "hasDevelopmentalType" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a developmental cell population. This should be used when a neuron develops from an identified developmental cell type." .
ilxtr:hasDriverExpressionConstitutivePhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasDriverExpressionConstitutivePhenotype" ;
rdfs:subPropertyOf ilxtr:hasDriverExpressionPhenotype .
ilxtr:hasDriverExpressionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasDriverExpressionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasExpressionPhenotype .
ilxtr:hasDriverExpressionInducedPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasDriverExpressionInducedPhenotype" ;
rdfs:subPropertyOf ilxtr:hasDriverExpressionPhenotype ;
rdfs:comment "Use for things like cre-ER" .
ilxtr:hasExpressionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasExpressionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasMolecularPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a gene type including any gene products." ;
rdfs:comment "This may also include the products of molecular synthesis pathways that are indirectly supported by genes, however it seems likely that that relationship should not be though of as an expression phenotype." .
ilxtr:hasElectrophysiologicalPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasElectrophysiologicalPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and an electrophysiological phenotype concept. This should be used when a neuron type is described using a high level electrophysiological concept class." .
ilxtr:hasExperimentalPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasExperimentalPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron and an experimental condition. This should be used when a neuron type is described by some experimental condition or functional designation." ;
rdfs:comment "This needs a better name. It is clear what it means when you see examples of the usage." .
ilxtr:hasReverseConnectionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasReverseConnectionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasConnectionPhenotype ;
owl:inverseOf ilxtr:hasForwardConnectionPhenotype .
ilxtr:hasFunctionalCircuitRolePhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasFunctionalCircuitRolePhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron and the immediate effect that it has on post synaptic cells. This is usually either excitatory or inhibitory." ;
rdfs:comment "this is currently a subproperty of hasPhenotype because we need to work out the relationship between circuit role and projection phenotype" .
ilxtr:hasInstanceInSpecies a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasInstanceInSpecies" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a species. This should be used when a neuron type has been observed in a specific species." ;
rdfs:comment "should rarely be used, even if dealing with evidence based models because it is an extremely weak assertion, possibly rename to hasBeenObservedInAtLeastOneIndividualInSpecies or something like that" .
ilxtr:hasInstanceInTaxon a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasInstanceInTaxon" ;
rdfs:subPropertyOf ilxtr:hasInstanceInSpecies ;
skos:definition "Expresses a relationship between a neuron type and a taxon. When dealing with both EBMs and CUTs this is the predicate that should be used." ;
rdfs:comment "this is the weakest assertion we have available at a taxon level, hasInstanceInSpecies is even weaker since it does not propagage" .
ilxtr:hasLayerLocationPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasLayerLocationPhenotype" ;
rdfs:subPropertyOf ilxtr:hasLocationPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a laminar brain region." ;
rdfs:comment "May need hasSomaLayerLocation or something, do we really even need this?? if axioms are missing in parcellation schemes and uberon then it should be easy enough to add them, or at least we won't get disjointness issues because layers of cortex are orthogonal to parts of cortex (eg) and thus we shouldnt get reasoning errors" .
ilxtr:hasLocationPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasLocationPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a brain region or brain parcel. This is a superProperty and should not be used directly." ;
rdfs:comment "This property should not be used directly." .
ilxtr:hasNeurotransmitterPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasNeurotransmitterPhenotype" ;
rdfs:subPropertyOf ilxtr:hasMolecularPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a neurotransmitter that is released from vesicles contained within neurons of that neuron type." ;
rdfs:comment "includes small molecule and peptide, not entirely sure if we need this one, we do because expression and release are not 1:1" .
ilxtr:hasNucleicAcidExpressionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasNucleicAcidExpressionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasExpressionPhenotype ;
rdfs:comment "This should be used for detection of RNAs that code for proteins which may or may not have been detected directly." .
ilxtr:phenotypeOf a owl:ObjectProperty ;
rdfs:label "phenotypeOf" ;
rdfs:comment "of course this can never be universal, so is mostly useful for the python representation" .
ilxtr:hasPhenotypeModifier a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasPhenotypeModifier" ;
skos:definition "Expresses a restriction that modifies all phenotypes associated with a neuron type or a logical phenotype, only meaningful when used inside of owl:intersectionOf" .
ilxtr:hasPresynapticTerminalsIn a owl:ObjectProperty ;
rdfs:label "hasPresynapticTerminalsIn" ;
rdfs:subPropertyOf ilxtr:hasPresynapticElementIn ;
rdfs:comment "DO NOT USE, AMBIGUOUS! Are there cases where there are boutons that form on dendrites?" .
ilxtr:hasProjectionLaterality a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasProjectionLaterality" ;
rdfs:subPropertyOf ilxtr:hasProjectionPhenotype ;
skos:definition "Expresses a relationship between a neuron type and whether the target region it projects to is on the same, opposite, or both sides of the brain." ;
rdfs:comment "ispilateral, contralateral, and bilateral are kind of like cortico thalamic but they are lifted to an invariant form that doesn’t care about the exact starting side, unilateral is the union of ipsi and contra but I’m fairly certain that unilateral should never be reported because it is ambiguous, this is primarily a convenience relation for neurons that have a single projection laterality, however there are plenty of examples where there are neurons that project to two different regions one of which is ipsi and the other of which is contra, those cases require the composition to happen on the object of the restriction, so you wind up with has projection phenotype some ipsilateral region, otherwise all our definitions are consistent with bilateral and unilateral projections, which is something we will probably have to fix, right now we are using the PATO laterality terms but the modelling isn’t really what we want because we need to have ipsilateral disjoint from contralateral and disjoint from bilateral" .
ilxtr:hasProjectionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasProjectionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a brain region that said neuron type sends axons to." ;
rdfs:comment "this might be clearer than hasCircuitRole but might confuse with projectsTo or the like, excitatory/inhibitory shouldn't be handled here? The way that projection vs intrinsic is modelled relates whether axons leave the brain region that contains the soma or not, this is not fully modelled at the moment" .
ilxtr:hasProteinExpressionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasProteinExpressionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasExpressionPhenotype .
ilxtr:hasReporterExpressionPhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasReporterExpressionPhenotype" ;
rdfs:subPropertyOf ilxtr:hasExpressionPhenotype .
ilxtr:hasSmallMoleculePhenotype a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasSmallMoleculePhenotype" ;
rdfs:subPropertyOf ilxtr:hasMolecularPhenotype ;
skos:definition "Expresses a relationship between a neuron and a small molecule that is the product of some molecular pathway that may or may not be expressed in the neuron in question." ;
rdfs:comment "This would probably be used to indicate the detection of the machinery for the synthesis pathway. If just the molecule is detected then hasMolecularPhenotype should be used since expression cannot be inferred (for neurotransmitters)." .
ilxtr:hasSomaLocatedIn a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasSomaLocatedIn" ;
rdfs:subPropertyOf ilxtr:hasLocationPhenotype .
ilxtr:hasSomaLocatedInLayer a owl:ObjectProperty ;
rdfs:label "hasSomaLocatedInLayer" ;
rdfs:subPropertyOf ilxtr:hasLayerLocationPhenotype , ilxtr:hasSomaLocatedIn .
ilxtr:hasSomaLocationLaterality a owl:ObjectProperty ;
rdfs:label "hasSomaLocationLaterality" ;
rdfs:subPropertyOf ilxtr:hasSomaLocatedIn .
ilxtr:hasSomaPhenotype a owl:ObjectProperty ;
rdfs:label "hasSomaPhenotype" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and some phenotype of its soma." ;
rdfs:comment "Use to provide clarity about where a generic phenotype is attached in the event that the object is not qualified. The alternative is to precompose the subcompartments e.g. SmallSomaPhenotype and SmallAxonPhenotype." .
ilxtr:hasTaxonRank a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "hasTaxonRank" ;
rdfs:subPropertyOf ilxtr:hasInstanceInTaxon ;
skos:definition "Expresses a relationship between a neuron type and a taxon. This should be used when a neuron type is thought to have been present in the last common ancestor of the taxon." ;
rdfs:comment "note that this is a subPropertyOf hasInstanceInTaxon NOT the other way around, aka isAncestralInTaxon, even stronger claim than instance and propagates downward implying that instances were present in all members except those specifically marked (which owl can't really support)" .
ilxtr:labelPartOf a owl:ObjectProperty , owl:TransitiveProperty ;
rdfs:label "labelPartOf" ;
rdfs:subPropertyOf partOf: .
ilxtr:phenotypeCooccuresWith a owl:ObjectProperty ;
rdfs:label "phenotypeCooccuresWith" ;
skos:definition "Expresses a relationship between a phenotype and a phenotype. This should be used when two phenotypes commonly cooccure." ;
rdfs:comment "this is not the right way to pull this off, need something akin to disjointness" .
ilxtr:phenotypeObservedInBrainRegion a owl:ObjectProperty ;
rdfs:label "phenotypeObservedInBrainRegion" ;
skos:definition "Expresses a relationship between a phenotype and a brain region. This should be used when a neuron phenotype is observed in specific brain regions." ;
rdfs:comment "existential not universal" .
ilxtr:receivesProjectionFrom a owl:ObjectProperty , owl:AsymmetricProperty , owl:IrreflexiveProperty ;
rdfs:label "receivesProjectionFrom" ;
rdfs:subPropertyOf ilxtr:hasPhenotype ;
skos:definition "Expresses a relationship between a neuron type and a brain region where said neuron type has a reverse connection phenotype with some neuron type that has its soma located in said brain region." ;
rdfs:comment "this is essentially hasReverseProjectionPhenotype, however, unlike for connection phenotypes where forward and reverse are not ambiguous, a reverse projection is a confusing concept and thus not used" .
RO:0002433 a owl:ObjectProperty ;
rdfs:label "contributes to morphology of" ;
rdfs:subPropertyOf overlaps: .
altTerm: a owl:AnnotationProperty ;
rdfs:label "alternative term"@en ;
rdfs:isDefinedBy .
rdfs:isDefinedBy a owl:AnnotationProperty .
BFO:0000179 a owl:AnnotationProperty ;
rdfs:label "BFO OWL specification label"@en ;
rdfs:subPropertyOf rdfs:label ;
IAO:0000115 "Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification."@en ;
IAO:0000232 "Really of interest to developers only"@en .
IAO:0000232 a owl:AnnotationProperty ;
rdfs:label "curator note"@en ;
rdfs:isDefinedBy .
BFO:0000180 a owl:AnnotationProperty ;
rdfs:label "BFO CLIF specification label"@en ;
rdfs:subPropertyOf rdfs:label ;
IAO:0000115 "Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2"@en ;
IAO:0000232 "Really of interest to developers only"@en ;
IAO:0000119 "Person:Alan Ruttenberg" .
IAO:0000119 a owl:AnnotationProperty ;
rdfs:label "definition source"@en ;
rdfs:isDefinedBy .
dc:member a owl:AnnotationProperty .
IAO:0000116 a owl:AnnotationProperty ;
rdfs:label "editor note"@en ;
rdfs:isDefinedBy .
foaf:homepage a owl:AnnotationProperty .
foaf:mbox a owl:AnnotationProperty .
IAO:0000111 a owl:AnnotationProperty ;
rdfs:label "editor preferred term"@en ;
rdfs:isDefinedBy .
IAO:0000112 a owl:AnnotationProperty ;
rdfs:label "example of usage"@en ;
rdfs:isDefinedBy .
IAO:0000600 a owl:AnnotationProperty ;
rdfs:label "elucidation"@en ;
rdfs:isDefinedBy .
IAO:0000601 a owl:AnnotationProperty ;
rdfs:label "has associated axiom(nl)"@en ;
rdfs:isDefinedBy .
IAO:0000602 a owl:AnnotationProperty ;
rdfs:label "has associated axiom(fol)"@en ;
rdfs:isDefinedBy .
IAO:0010000 a owl:AnnotationProperty ;
rdfs:label "has axiom label"@en ;
rdfs:isDefinedBy .
IAO:0000412 a owl:AnnotationProperty ;
rdfs:label "imported from"@en ;
rdfs:isDefinedBy .
rdfs:seeAlso a owl:AnnotationProperty .
skos:hiddenLabel a owl:AnnotationProperty ;
rdfs:label "hidden label" .
skos:prefLabel a owl:AnnotationProperty ;
rdfs:label "preferred label" .
IAO:0000117 a owl:AnnotationProperty ;
rdfs:label "term editor"@en ;
rdfs:isDefinedBy .
atom:hasResolutionX a owl:DatatypeProperty ;
rdfs:label "hasResolutionX" .
atom:hasResolutionY a owl:DatatypeProperty ;
rdfs:label "hasResolutionY" .
atom:hasResolutionZ a owl:DatatypeProperty ;
rdfs:label "hasResolutionZ" .
ns7: a owl:Class ;
rdfs:label "Allen Mouse Brain Atlas parcellation label root" ;
NIFRID:abbrev "mba" ;
rdfs:subClassOf ilxtr:parcellationLabel , _:anon-genid-23dc662664fc4769bf28029f4af71604-10 , atom:Label .
ilxtr:parcellationLabel a owl:Class ;
rdfs:subClassOf UBERON:0001062 ;
owl:equivalentClass atom:Label .
_:anon-genid-23dc662664fc4769bf28029f4af71604-10 a owl:Restriction ;
owl:onProperty ilxtr:isDefinedBy ;
owl:someValuesFrom ns1:2 .
AIBSTL:301021674 a owl:Class ;
rdfs:subClassOf TEMPIND:Oxtr .
TEMPIND:Oxtr a owl:Class ;
rdfs:label "Oxtr (indicator)" ;
NIFRID:synonym "Oxytocin receptor" ;
skos:hiddenLabel "Oxtr" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
AIBSTL:543338518 a owl:Class ;
rdfs:subClassOf TEMPIND:Vipr2 .
TEMPIND:Vipr2 a owl:Class ;
rdfs:label "Vipr2 (indicator)" ;
NIFRID:synonym "vasoactive intestinal peptide receptor 2" ;
skos:hiddenLabel "Vipr2" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
atom:Alignment a owl:Class ;
rdfs:label "spatial alignment" ;
IAO:0000115 "dataset -> dataset, rotation, translation" ;
rdfs:subClassOf atom:Process , _:anon-genid-23dc662664fc4769bf28029f4af71604-11 , _:anon-genid-23dc662664fc4769bf28029f4af71604-12 ;
ilxtr:localName "alignment" .
atom:Process a owl:Class ;
rdfs:label "process" ;
ilxtr:localName "process" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:SpacePreservingLinearTransformation .
atom:SpacePreservingLinearTransformation a owl:Class ;
rdfs:label "space preserving linear transformation" ;
rdfs:subClassOf atom:LinearTransformation .
_:anon-genid-23dc662664fc4769bf28029f4af71604-12 a owl:Restriction ;
owl:onProperty ilxtr:hasInformationOutput ;
owl:someValuesFrom atom:TransformationRule .
atom:AnatomicalAxis a owl:Class ;
rdfs:label "anatomical axis" ;
IAO:0000115 "an anatomical axis, e.g. rostral caudal, dorsal ventral, etc. is composed of two colinear and opposed anatomical directions" ;
rdfs:subClassOf atom:Axis .
atom:Axis a owl:Class ;
rdfs:label "axis" ;
rdfs:subClassOf _:anon-genid-23dc662664fc4769bf28029f4af71604-115 .
atom:AnatomicalAxisAlignmentVector a owl:Class ;
rdfs:label "anatomical axis alignment vector" .
atom:AnatomicalAxisAlignmentVectorCartesian a owl:Class ;
rdfs:label "cartesian anatomical axis alignment vector" ;
rdfs:subClassOf atom:AnatomicalAxisAlignmentVector , _:anon-genid-23dc662664fc4769bf28029f4af71604-13 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14 , _:anon-genid-23dc662664fc4769bf28029f4af71604-15 ;
ilxtr:localName "anatomical axis alignment vector" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-13 a owl:Restriction ;
owl:onProperty atom:hasDirectionMappedToPositiveX ;
owl:someValuesFrom atom:AnatomicalDirection .
atom:AnatomicalDirection a owl:Class ;
rdfs:label "anatomical direction" ;
rdfs:subClassOf atom:Direction .
_:anon-genid-23dc662664fc4769bf28029f4af71604-14 a owl:Restriction ;
owl:onProperty atom:hasDirectionMappedToPositiveY ;
owl:someValuesFrom atom:AnatomicalDirection .
_:anon-genid-23dc662664fc4769bf28029f4af71604-15 a owl:Restriction ;
owl:onProperty atom:hasDirectionMappedToPositiveZ ;
owl:someValuesFrom atom:AnatomicalDirection .
atom:AnatomicalDataset a owl:Class ;
rdfs:label "anatomical dataset" ;
NIFRID:synonym "default image" , "raw image" , "template" , "uncoordinated dataset" , "unoriented dataset" ;
rdfs:subClassOf atom:Data , _:anon-genid-23dc662664fc4769bf28029f4af71604-16 ;
ilxtr:localName "anatomical dataset" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-16 a owl:Restriction ;
owl:onProperty atom:hasSpace ;
owl:someValuesFrom atom:ImageSpace .
atom:ImageSpace a owl:Class ;
rdfs:label "anatomical image space" ;
NIFRID:synonym "data space" , "dataset space" , "donor space" , "image space" , "individual space" , "intrinsic data space" , "intrinsic space" , "sample space" , "specimen space" ;
IAO:0000115 "an image space is the intrinsic or implicit space that is defined by an image, in digital images it is usually discretized as matrix, it usually euclidean and supports a cartesian distance metric, however in cases where there is a non-uniformly sampling sensor or if the image was collected in the frequency domain (e.g. for MRI images) then the image space has different dimensions which may non-spatial (FIXME need some clarity about data captured in the frequency domain)" ;
rdfs:subClassOf atom:Space ;
ilxtr:localName "image space" ;
ilxtr:editorQuestion "are specimen/individual space different from image/dataset space?" .
atom:Direction a owl:Class ;
rdfs:label "direction" .
atom:Anchoring a owl:Class ;
rdfs:label "anchoring" ;
NIFRID:synonym "RegistrationUsingAnnotationOnly" ;
IAO:0000115 "dataset -> annotation" ;
rdfs:subClassOf atom:Process ;
ilxtr:localName "anchoring" .
atom:Artifact a owl:Class ;
rdfs:label "parcellation artifact" ;
NIFRID:synonym "parcellation artifact" ;
ilxtr:hasIlxId ILX:0777105 ;
ilxtr:localName "artifact" ;
owl:equivalentClass ilxtr:parcellationArtifact .
_:anon-genid-23dc662664fc4769bf28029f4af71604-17 a owl:Restriction ;
owl:onProperty atom:annotates ;
owl:someValuesFrom atom:Space ;
owl:cardinality 1 .
atom:AnnotationCriteria a owl:Class ;
rdfs:label "anatomical annotation criteria" ;
NIFRID:synonym "anatomical delineation criteria" , "delineation criteria" , "parcellation annotation criteria" ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact ;
ilxtr:localName "annotation criteria" .
atom:AnnotationCriteriaApplication a owl:Class ;
rdfs:label "annotation criteria application" ;
rdfs:subClassOf atom:Process ;
ilxtr:localName "annotation criteria application" .
atom:AnnotationSet a owl:Class ;
rdfs:label "anatomical annotation set" ;
NIFRID:synonym "annotation set" , "parcellation annotation set" ;
ilxtr:hasIlxId ILX:0777108 ;
IAO:0000115 "A set of anatomical annotations that are anchored in the same space." ;
IAO:0000116 "It is probably the case that the hasMember Annotation restriction could be an equivalent class axiom." ;
rdfs:subClassOf atom:Artifact , _:anon-genid-23dc662664fc4769bf28029f4af71604-18 , ilxtr:parcellationArtifact ;
ilxtr:localName "annotation set" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-18 a owl:Restriction ;
owl:onProperty RO:0002351 ;
owl:someValuesFrom atom:Annotation .
atom:Anterior a owl:Class ;
rdfs:label "anterior" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-19 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-19 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Posterior .
atom:Posterior a owl:Class ;
rdfs:label "posterior" ;
IAO:0000115 "toward the buttocks" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-144 .
atom:AnteriorPosteriorAxis a owl:Class ;
rdfs:label "anterior posterior axis" ;
rdfs:subClassOf atom:AnatomicalAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-110 , _:anon-genid-23dc662664fc4769bf28029f4af71604-111 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-110 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Anterior .
_:anon-genid-23dc662664fc4769bf28029f4af71604-111 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Posterior .
ilxtr:parcellationArtifact a owl:Class .
atom:Atlas a owl:Class ;
rdfs:label "parcellation atlas" ;
NIFRID:synonym "anatomical reference atlas" ;
ilxtr:hasIlxId ILX:0777109 ;
IAO:0000115 "An anatomical reference atlas is information content entity that contains minimally a notion of space and one of an annotation set or an unannotated but registered set of source data, the space may be explicit or implicit. An atlas is anything that is used to guide experiments or deal with some spatial relation between things or the location of things. For example a feature atlas may have only a boolean mask of stained/unstained for a given marker across the whole brain. On the other hand there may be purely schematic or conceptual atlases that show the relative positions of landmarks that are useful for guiding surgical procedures that have an intentionally distorted or schematic representation of space but that nonetheless capture real an critical spatial relations between regions. Reference atlases usually have additional parts that make them more useful in certain situations, such as a well defined coordinate system, delineations indicating the boundaries of various regions or cell populations, landmarks, and labels and names to make it easier to communicate about well known and useful locations." ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact , _:anon-genid-23dc662664fc4769bf28029f4af71604-112 , _:anon-genid-23dc662664fc4769bf28029f4af71604-113 , _:anon-genid-23dc662664fc4769bf28029f4af71604-114 ;
ilxtr:localName "atlas" ;
owl:equivalentClass ilxtr:parcellationAtlas .
ilxtr:parcellationAtlas a owl:Class ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact .
_:anon-genid-23dc662664fc4769bf28029f4af71604-112 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:AnnotationSet .
_:anon-genid-23dc662664fc4769bf28029f4af71604-113 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:Space .
_:anon-genid-23dc662664fc4769bf28029f4af71604-114 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:Terminology .
atom:Terminology a owl:Class ;
rdfs:label "parcellation terminology" ;
NIFRID:synonym "controlled vocabulary" ;
ilxtr:hasIlxId ILX:0777107 ;
IAO:0000115 "a collection of terms that can be used to name annotations in an atlas" ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact ;
ilxtr:localName "terminology" ;
owl:equivalentClass ilxtr:parcellationTerminology .
_:anon-genid-23dc662664fc4769bf28029f4af71604-115 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Direction ;
owl:cardinality 2 .
atom:AxisDirectionMatrix a owl:Class ;
rdfs:label "axis direction matrix" ;
rdfs:subClassOf atom:Matrix .
atom:Matrix a owl:Class ;
rdfs:label "matrix" ;
ilxtr:localName "matrix" .
atom:AxisOrigin a owl:Class ;
rdfs:label "axis origin" ;
IAO:0000116 "" ;
rdfs:subClassOf atom:Vector .
atom:Vector a owl:Class ;
rdfs:label "vector" ;
ilxtr:localName "vector" .
atom:Border a owl:Class ;
rdfs:label "anatomical border" ;
IAO:0000115 "A border is a spatial entities that when projected into two dimensions forms a line (line in 2d or plane in 3d). The border may be of finite length, and may occupy a subsegment of a longer closed boundary." , "A border is topologically equivalent to a point. A finite point, line, or plane. It can be used to define notions of nearness and relative position in the context of another landmark. For example if there are two points you can talk about a third point being on one side of the border point relative to the landmark point." ;
rdfs:subClassOf atom:Line ;
ilxtr:localName "border" .
atom:Line a owl:Class ;
rdfs:label "anatomical line" ;
rdfs:subClassOf atom:Annotation ;
ilxtr:localName "line" .
atom:Boundary a owl:Class ;
rdfs:label "anatomical boundary" ;
IAO:0000115 "A boundary is a closed curve or surface that is topologically equivalent to a circle, it defines an inside and an outside that are disconnected." ;
rdfs:subClassOf atom:ClosedCurve ;
ilxtr:localName "boundary" .
atom:ClosedCurve a owl:Class ;
rdfs:label "anatomical closed curve" ;
IAO:0000115 "curves that are topologically equivalent to a circle" ;
rdfs:subClassOf atom:Annotation ;
ilxtr:localName "closed curve" .
atom:Caudal a owl:Class ;
rdfs:label "caudal" ;
IAO:0000115 "toward the tail" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-116 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Rostral .
atom:Rostral a owl:Class ;
rdfs:label "rostral" ;
IAO:0000115 "toward the snount" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-152 .
atom:Centroid a owl:Class ;
rdfs:label "anatomical centroid" ;
IAO:0000115 "a point surrounded by an indeterminate/unknown/probabilistic (but closed) boundary where the indeterminateness of said boundary is usually due to the fact that the context in which a label associated with the centroid is being used does not admit a single operational defintion, i.e. that there is not agreement on the exact definition of the term but there is some agreement that it exists" ;
rdfs:subClassOf atom:Point ;
ilxtr:localName "centroid" .
atom:Point a owl:Class ;
rdfs:label "anatomical point" ;
IAO:0000115 "a 1d point defined by a single vector having the same dimensions as the space in which it is defined" ;
rdfs:subClassOf atom:Annotation ;
ilxtr:localName "point" .
atom:CoordinatedDataset a owl:Class ;
rdfs:label "coordinated dataset" ;
NIFRID:synonym "reconstructed brain" ;
rdfs:subClassOf atom:Data , _:anon-genid-23dc662664fc4769bf28029f4af71604-117 ;
ilxtr:localName "coordinated dataset" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-117 a owl:Restriction ;
owl:onProperty atom:hasSpace ;
owl:someValuesFrom atom:Space .
atom:CoordinateSystemApplication a owl:Class ;
rdfs:label "coordinate system application" ;
rdfs:subClassOf atom:Process , _:anon-genid-23dc662664fc4769bf28029f4af71604-118 , _:anon-genid-23dc662664fc4769bf28029f4af71604-119 ;
ilxtr:localName "coordinate system application" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-118 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:Alignment .
_:anon-genid-23dc662664fc4769bf28029f4af71604-119 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:Transformation .
atom:Transformation a owl:Class ;
rdfs:label "spatial transformation" ;
IAO:0000115 "space -> space" ;
rdfs:subClassOf atom:Process , _:anon-genid-23dc662664fc4769bf28029f4af71604-160 , _:anon-genid-23dc662664fc4769bf28029f4af71604-161 ;
ilxtr:localName "transformation" .
atom:CoordinateSystemDefinition a owl:Class ;
rdfs:label "coordinate system definition" ;
NIFRID:synonym "coordination rule" ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact ;
ilxtr:localName "coordinate system definition" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-120 a owl:Restriction ;
owl:onProperty atom:hasResolution ;
owl:someValuesFrom atom:Resolution ;
owl:cardinality 1 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-121 a owl:Restriction ;
owl:onProperty atom:hasSpace ;
owl:someValuesFrom atom:Space .
_:anon-genid-23dc662664fc4769bf28029f4af71604-122 a owl:Restriction ;
owl:onProperty atom:isMeasurementOf ;
owl:someValuesFrom NCBITaxon:1 .
NCBITaxon:1 a owl:Class ;
rdfs:label "root" ;
NIFRID:synonym "root" , "all" ;
rdfs:subClassOf OBI:0100026 .
atom:Delineation a owl:Class ;
rdfs:label "anatomical delineation" ;
IAO:0000115 "an annotation with criteria demarcating the border between two regions or the boundary of a single region" ;
rdfs:subClassOf atom:Annotation ;
ilxtr:localName "delineation" .
atom:Dorsal a owl:Class ;
rdfs:label "dorsal" ;
IAO:0000115 "toward the back or toward the top of the skull in organisms where development has twisted things (humans)" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-123 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-123 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Ventral .
atom:Ventral a owl:Class ;
rdfs:label "ventral" ;
IAO:0000115 "toward the belly" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-163 .
atom:DorsalVentralAxis a owl:Class ;
rdfs:label "dorsal ventral axis" ;
IAO:0000115 "the anatomical axis from back to belly" ;
rdfs:subClassOf atom:AnatomicalAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-124 , _:anon-genid-23dc662664fc4769bf28029f4af71604-125 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-124 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Dorsal .
_:anon-genid-23dc662664fc4769bf28029f4af71604-125 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Ventral .
atom:Inferior a owl:Class ;
rdfs:label "inferior" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-126 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-126 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Superior .
atom:Superior a owl:Class ;
rdfs:label "superior" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-159 .
atom:InferiorSuperiorAxis a owl:Class ;
rdfs:label "inferior superior axis" ;
rdfs:subClassOf atom:AnatomicalAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-127 , _:anon-genid-23dc662664fc4769bf28029f4af71604-128 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-127 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Inferior .
_:anon-genid-23dc662664fc4769bf28029f4af71604-128 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Superior .
atom:Label a owl:Class ;
rdfs:label "parcellation label" ;
NIFRID:synonym "Parcellation Label" , "parcellation term" , "term" ;
skos:definition "Parcellation labels are strings characthers sometimes associated with a unique identifier, such as an index number or an iri." ;
rdfs:subClassOf UBERON:0001062 ;
ilxtr:localName "label" .
UBERON:0001062 a owl:Class ;
rdfs:label "anatomical entity" ;
NIFRID:synonym "anatomical entity" ;
rdfs:subClassOf BFO:0000004 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153460 .
atom:Landmark a owl:Class ;
rdfs:label "anatomical landmark" ;
IAO:0000115 "Any annotation that is not closed (topologically equivalent to a point)." ;
rdfs:subClassOf atom:Annotation ;
ilxtr:localName "landmark" .
atom:Lateral a owl:Class ;
rdfs:label "lateral" ;
IAO:0000115 "direction away from the midline" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-129 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-129 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Medial .
atom:Medial a owl:Class ;
rdfs:label "medial" ;
IAO:0000115 "toward the midline" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-134 .
atom:Left a owl:Class ;
rdfs:label "left" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-130 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-130 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Right .
atom:Right a owl:Class ;
rdfs:label "right" ;
rdfs:subClassOf atom:AnatomicalDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-151 .
atom:LeftRightAxis a owl:Class ;
rdfs:label "left right axis" ;
rdfs:subClassOf atom:AnatomicalAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-131 , _:anon-genid-23dc662664fc4769bf28029f4af71604-132 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-131 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Left .
_:anon-genid-23dc662664fc4769bf28029f4af71604-132 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Right .
atom:LinearRegistration a owl:Class ;
rdfs:label "linear registration" ;
rdfs:subClassOf atom:Registration , _:anon-genid-23dc662664fc4769bf28029f4af71604-133 .
atom:Registration a owl:Class ;
rdfs:label "spatial registration" ;
IAO:0000115 "dataset -> dataset, rotation, translation, scaling, or some nonlinear transformation" , "Registration is the process of changing the relative position and/or scaling of two datasets so that they become aligned for some definition of alignment." ;
rdfs:subClassOf atom:Alignment , _:anon-genid-23dc662664fc4769bf28029f4af71604-146 ;
ilxtr:localName "registration" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-133 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:LinearTransformation .
atom:LinearTransformation a owl:Class ;
rdfs:label "linear transformation" ;
rdfs:subClassOf atom:Transformation .
_:anon-genid-23dc662664fc4769bf28029f4af71604-134 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Lateral .
atom:MedialLateralAxis a owl:Class ;
rdfs:label "medial lateral axis" ;
rdfs:subClassOf atom:AnatomicalAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-135 , _:anon-genid-23dc662664fc4769bf28029f4af71604-136 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-135 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Lateral .
_:anon-genid-23dc662664fc4769bf28029f4af71604-136 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Medial .
atom:NegativeX a owl:Class ;
rdfs:label "negative x" ;
rdfs:subClassOf atom:SpatialDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-137 .
atom:SpatialDirection a owl:Class ;
rdfs:label "spatial direction" ;
rdfs:subClassOf atom:Direction .
_:anon-genid-23dc662664fc4769bf28029f4af71604-137 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:PositiveX .
atom:PositiveX a owl:Class ;
rdfs:label "positive x" ;
rdfs:subClassOf atom:SpatialDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-141 .
atom:NegativeY a owl:Class ;
rdfs:label "negative y" ;
rdfs:subClassOf atom:SpatialDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-138 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-138 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:PositiveY .
atom:PositiveY a owl:Class ;
rdfs:label "positive y" ;
rdfs:subClassOf atom:SpatialDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-142 .
atom:NegativeZ a owl:Class ;
rdfs:label "negative z" ;
rdfs:subClassOf atom:SpatialDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-139 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-139 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:PositiveZ .
atom:PositiveZ a owl:Class ;
rdfs:label "positive z" ;
rdfs:subClassOf atom:SpatialDirection , _:anon-genid-23dc662664fc4769bf28029f4af71604-143 .
atom:NonLinearRegistration a owl:Class ;
rdfs:label "nonlinear registration" ;
rdfs:subClassOf atom:Registration , _:anon-genid-23dc662664fc4769bf28029f4af71604-140 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-140 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:NonLinearTransformation .
atom:NonLinearTransformation a owl:Class ;
rdfs:label "nonlinear transformation" ;
rdfs:subClassOf atom:Transformation .
atom:Orienting a owl:Class ;
rdfs:label "spatial orienting" ;
NIFRID:synonym "orienting" ;
IAO:0000115 "axis -> axis" , "Orienting is the process of changing the relative position of two axes so that they become aligned for some definition of alignment." ;
rdfs:subClassOf atom:Alignment ;
ilxtr:localName "orienting" .
atom:Parcellation a owl:Class ;
rdfs:label "anatomical parcellation" ;
NIFRID:synonym "anatomical parcellation scheme" , "parcellation scheme" ;
rdfs:subClassOf atom:AnnotationSet ;
ilxtr:localName "parcellation" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-141 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:NegativeX .
_:anon-genid-23dc662664fc4769bf28029f4af71604-142 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:NegativeY .
_:anon-genid-23dc662664fc4769bf28029f4af71604-143 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:NegativeZ .
_:anon-genid-23dc662664fc4769bf28029f4af71604-144 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Anterior .
_:anon-genid-23dc662664fc4769bf28029f4af71604-145 a owl:Restriction ;
owl:onProperty atom:names ;
owl:someValuesFrom atom:Annotation ;
owl:cardinality 1 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-146 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:Transformation .
_:anon-genid-23dc662664fc4769bf28029f4af71604-147 a owl:Restriction ;
owl:onProperty atom:hasResolutionX ;
owl:someValuesFrom owl:real .
_:anon-genid-23dc662664fc4769bf28029f4af71604-148 a owl:Restriction ;
owl:onProperty atom:hasResolutionY ;
owl:someValuesFrom owl:real .
_:anon-genid-23dc662664fc4769bf28029f4af71604-149 a owl:Restriction ;
owl:onProperty atom:hasResolutionZ ;
owl:someValuesFrom owl:real .
_:anon-genid-23dc662664fc4769bf28029f4af71604-150 a owl:Restriction ;
owl:onProperty atom:hasUnit ;
owl:someValuesFrom atom:spaceUnit .
_:anon-genid-23dc662664fc4769bf28029f4af71604-151 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Left .
_:anon-genid-23dc662664fc4769bf28029f4af71604-152 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Caudal .
atom:RostralCaudalAxis a owl:Class ;
rdfs:label "rostral caudal axis" ;
IAO:0000115 "The snout to tail axis." ;
rdfs:subClassOf atom:AnatomicalAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-153 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-153 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Caudal .
_:anon-genid-23dc662664fc4769bf28029f4af71604-154 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:Rostral .
atom:Rotation a owl:Class ;
rdfs:label "rotation" ;
rdfs:subClassOf atom:SpacePreservingLinearTransformation .
atom:RotationMatrix a owl:Class ;
rdfs:label "rotation matrix" ;
rdfs:subClassOf atom:TransformationMatrix .
atom:TransformationMatrix a owl:Class ;
rdfs:label "transformation matrix" ;
rdfs:subClassOf atom:TransformationRule , atom:Matrix ;
ilxtr:localName "transformation matrix" .
atom:Scaling a owl:Class ;
rdfs:label "scaling" ;
rdfs:subClassOf atom:LinearTransformation .
atom:Segmentation a owl:Class ;
rdfs:label "anatomical segmentation" ;
IAO:0000115 "an annotation set that may or may not have an explicit bounding region but that does break or separate the area or volume into distinct segments" ;
IAO:0000116 "This isn't really distinct from an annotation set." ;
rdfs:subClassOf atom:AnnotationSet ;
ilxtr:localName "segmentation" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-155 a owl:Restriction ;
owl:onProperty atom:hasUnit ;
owl:someValuesFrom atom:spaceUnit .
_:anon-genid-23dc662664fc4769bf28029f4af71604-156 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:AnatomicalAxisAlignmentVector .
_:anon-genid-23dc662664fc4769bf28029f4af71604-157 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:AxisDirectionMatrix .
_:anon-genid-23dc662664fc4769bf28029f4af71604-158 a owl:Restriction ;
owl:onProperty BFO:0000051 ;
owl:someValuesFrom atom:AxisOrigin .
atom:SpatialAxis a owl:Class ;
rdfs:label "spatial axis" ;
rdfs:subClassOf atom:Axis .
_:anon-genid-23dc662664fc4769bf28029f4af71604-159 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Inferior .
ilxtr:parcellationTerminology a owl:Class ;
rdfs:subClassOf atom:Artifact , ilxtr:parcellationArtifact .
atom:Tiling a owl:Class ;
rdfs:label "anatomical tiling parcellation" ;
NIFRID:synonym "tiling annotation set" , "tiling parcellation" ;
IAO:0000115 "an annotation set that forms a non-overlapping cover of a single bounding annotation" ;
IAO:0000116 "closure axioms related to the bounding annotation need to be considered" ;
rdfs:subClassOf atom:AnnotationSet ;
ilxtr:localName "tiling" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-160 a owl:Restriction ;
owl:onProperty ilxtr:hasInformationInput ;
owl:someValuesFrom atom:Space .
_:anon-genid-23dc662664fc4769bf28029f4af71604-161 a owl:Restriction ;
owl:onProperty ilxtr:hasInformationOutput ;
owl:someValuesFrom atom:Space .
_:anon-genid-23dc662664fc4769bf28029f4af71604-162 a owl:Restriction ;
owl:onProperty atom:transforms ;
owl:someValuesFrom atom:Space .
atom:Translation a owl:Class ;
rdfs:label "translation" ;
rdfs:subClassOf atom:SpacePreservingLinearTransformation .
atom:UnorientedSpace a owl:Class ;
rdfs:label "unoriented space" ;
IAO:0000115 "A mathematical space that is not equipped with an explicit mapping between spatial and anatomical axes. In such spaces it is not possible to determine whether an anatomical dataset is correctly oriented even if that dataset has been annotated with landmarks that can be used to determine the anatomical axes." ;
ilxtr:localName "unoriented space" .
_:anon-genid-23dc662664fc4769bf28029f4af71604-163 a owl:Restriction ;
owl:onProperty atom:hasOppositeDirection ;
owl:someValuesFrom atom:Dorsal .
atom:XAxis a owl:Class ;
rdfs:label "x axis" ;
rdfs:subClassOf atom:SpatialAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-164 , _:anon-genid-23dc662664fc4769bf28029f4af71604-165 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-164 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:NegativeX .
_:anon-genid-23dc662664fc4769bf28029f4af71604-165 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:PositiveX .
atom:YAxis a owl:Class ;
rdfs:label "y axis" ;
rdfs:subClassOf atom:SpatialAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-166 , _:anon-genid-23dc662664fc4769bf28029f4af71604-167 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-166 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:NegativeY .
_:anon-genid-23dc662664fc4769bf28029f4af71604-167 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:PositiveY .
atom:ZAxis a owl:Class ;
rdfs:label "z axis" ;
rdfs:subClassOf atom:SpatialAxis , _:anon-genid-23dc662664fc4769bf28029f4af71604-168 , _:anon-genid-23dc662664fc4769bf28029f4af71604-169 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-168 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:NegativeZ .
_:anon-genid-23dc662664fc4769bf28029f4af71604-169 a owl:Restriction ;
owl:onProperty atom:hasDirection ;
owl:someValuesFrom atom:PositiveZ .
BFO:0000001 a owl:Class ;
rdfs:label "entity"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "entity" ;
BFO:0000180 "Entity" ;
IAO:0000116 "BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81"@en , "Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf"@en ;
IAO:0000112 "Julius Caesar"@en , "the Second World War"@en , "Verdi’s Requiem"@en , "your body mass index"@en ;
IAO:0000600 "An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])"@en ;
rdfs:subClassOf owl:Thing .
BFO:0000002 a owl:Class ;
rdfs:label "continuant"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "continuant" ;
BFO:0000180 "Continuant" ;
IAO:0000116 "BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240"@en , "Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants"@en ;
IAO:0000600 "A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])"@en ;
IAO:0000601 "if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])"@en , "if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])"@en , "if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])"@en ;
IAO:0000602 "(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] " , "(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] " , "(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] " , "(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] " ;
rdfs:subClassOf BFO:0000001 ;
owl:disjointWith BFO:0000003 .
BFO:0000003 a owl:Class ;
rdfs:label "occurrent"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "occurrent" ;
BFO:0000180 "Occurrent" ;
IAO:0000116 "BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region"@en , "BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players."@en , "Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process."@en , "Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame." ;
IAO:0000600 "An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])"@en ;
IAO:0000601 "b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])"@en , "Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])"@en ;
IAO:0000602 "(forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] " , "(forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] " ;
rdfs:subClassOf BFO:0000001 .
BFO:0000004 a owl:Class ;
rdfs:label "independent continuant"@en ;
IAO:0000115 "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "ic" ;
BFO:0000180 "IndependentContinuant" ;
IAO:0000112 "a chair"@en , "a heart"@en , "a leg"@en , "a molecule"@en , "a spatial region"@en , "an atom"@en , "an orchestra."@en , "an organism"@en , "the bottom right portion of a human torso"@en , "the interior of your mouth"@en ;
IAO:0000601 "For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])"@en , "For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])"@en ;
IAO:0000602 "(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] " , "(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] " , "(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] " ;
rdfs:subClassOf BFO:0000002 ;
owl:disjointWith BFO:0000020 , BFO:0000031 .
BFO:0000020 a owl:Class ;
rdfs:label "specifically dependent continuant"@en ;
IAO:0000115 "b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "sdc" ;
BFO:0000180 "SpecificallyDependentContinuant" ;
IAO:0000116 "Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc."@en ;
IAO:0000112 "the role of being a doctor"@en , "of one-sided specifically dependent continuants: the mass of this tomato"@en , "of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates."@en , "Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key"@en , "the disposition of this fish to decay"@en , "the function of this heart: to pump blood"@en , "the mutual dependence of proton donors and acceptors in chemical reactions [79"@en , "the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction"@en , "the pink color of a medium rare piece of grilled filet mignon at its center"@en , "the shape of this hole."@en , "the smell of this portion of mozzarella"@en ;
IAO:0000602 "(iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] " ;
rdfs:subClassOf BFO:0000002 ;
owl:disjointWith BFO:0000031 .
BFO:0000031 a owl:Class ;
rdfs:label "generically dependent continuant"@en ;
IAO:0000115 "b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "gdc" ;
BFO:0000180 "GenericallyDependentContinuant" ;
IAO:0000112 "The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity."@en , "the pdf file on your laptop, the pdf file that is a copy thereof on my laptop"@en , "the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule."@en ;
IAO:0000602 "(iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] " ;
rdfs:subClassOf BFO:0000002 .
BFO:0000006 a owl:Class ;
rdfs:label "spatial region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "s-region" ;
BFO:0000180 "SpatialRegion" ;
IAO:0000116 "BFO 2 Reference: Spatial regions do not participate in processes."@en , "Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional."@en ;
IAO:0000600 "A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001])"@en ;
IAO:0000601 "All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001])"@en ;
IAO:0000602 "(forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001] " , "(forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001] " ;
rdfs:subClassOf BFO:0000141 ;
owl:disjointWith BFO:0000029 , BFO:0000140 .
BFO:0000141 a owl:Class ;
rdfs:label "immaterial entity"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "immaterial" ;
BFO:0000180 "ImmaterialEntity" ;
IAO:0000116 "BFO 2 Reference: Immaterial entities are divided into two subgroups:boundaries and sites, which bound, or are demarcated in relation, to material entities, and which can thus change location, shape and size and as their material hosts move or change shape or size (for example: your nasal passage; the hold of a ship; the boundary of Wales (which moves with the rotation of the Earth) [38, 7, 10"@en ;
rdfs:subClassOf BFO:0000004 .
BFO:0000029 a owl:Class ;
rdfs:label "site"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "site" ;
BFO:0000180 "Site" ;
IAO:0000112 "a hole in the interior of a portion of cheese"@en , "a rabbit hole"@en , "an air traffic control region defined in the airspace above an airport"@en , "Manhattan Canyon)"@en , "the cockpit of an aircraft"@en , "the Grand Canyon"@en , "the hold of a ship"@en , "the interior of a kangaroo pouch"@en , "the interior of the trunk of your car"@en , "the interior of your bedroom"@en , "the interior of your office"@en , "the interior of your refrigerator"@en , "the lumen of your gut"@en , "the Piazza San Marco"@en , "your left nostril (a fiat part – the opening – of your left nasal cavity)"@en ;
IAO:0000600 "b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002])"@en ;
IAO:0000602 "(forall (x) (if (Site x) (ImmaterialEntity x))) // axiom label in BFO2 CLIF: [034-002] " ;
rdfs:subClassOf BFO:0000141 .
BFO:0000140 a owl:Class ;
rdfs:label "continuant fiat boundary"@en ;
IAO:0000115 "b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "cf-boundary" ;
BFO:0000180 "ContinuantFiatBoundary" ;
IAO:0000116 "BFO 2 Reference: a continuant fiat boundary is a boundary of some material entity (for example: the plane separating the Northern and Southern hemispheres; the North Pole), or it is a boundary of some immaterial entity (for example of some portion of airspace). Three basic kinds of continuant fiat boundary can be distinguished (together with various combination kinds [29"@en , "BFO 2 Reference: In BFO 1.1 the assumption was made that the external surface of a material entity such as a cell could be treated as if it were a boundary in the mathematical sense. The new document propounds the view that when we talk about external surfaces of material objects in this way then we are talking about something fiat. To be dealt with in a future version: fiat boundaries at different levels of granularity.More generally, the focus in discussion of boundaries in BFO 2.0 is now on fiat boundaries, which means: boundaries for which there is no assumption that they coincide with physical discontinuities. The ontology of boundaries becomes more closely allied with the ontology of regions."@en , "Continuant fiat boundary doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the mereological sum of two-dimensional continuant fiat boundary and a one dimensional continuant fiat boundary that doesn't overlap it. The situation is analogous to temporal and spatial regions."@en ;
IAO:0000601 "Every continuant fiat boundary is located at some spatial region at every time at which it exists"@en ;
IAO:0000602 "(iff (ContinuantFiatBoundary a) (and (ImmaterialEntity a) (exists (b) (and (or (ZeroDimensionalSpatialRegion b) (OneDimensionalSpatialRegion b) (TwoDimensionalSpatialRegion b)) (forall (t) (locatedInAt a b t)))) (not (exists (c t) (and (SpatialRegion c) (continuantPartOfAt c a t)))))) // axiom label in BFO2 CLIF: [029-001] " ;
rdfs:subClassOf BFO:0000141 .
BFO:0000008 a owl:Class ;
rdfs:label "temporal region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "t-region" ;
BFO:0000180 "TemporalRegion" ;
IAO:0000116 "Temporal region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the mereological sum of a temporal instant and a temporal interval that doesn't overlap the instant. In this case the resultant temporal region is neither 0-dimensional nor 1-dimensional"@en ;
IAO:0000600 "A temporal region is an occurrent entity that is part of time as defined relative to some reference frame. (axiom label in BFO2 Reference: [100-001])"@en ;
IAO:0000601 "All parts of temporal regions are temporal regions. (axiom label in BFO2 Reference: [101-001])"@en , "Every temporal region t is such that t occupies_temporal_region t. (axiom label in BFO2 Reference: [119-002])"@en ;
IAO:0000602 "(forall (r) (if (TemporalRegion r) (occupiesTemporalRegion r r))) // axiom label in BFO2 CLIF: [119-002] " , "(forall (x y) (if (and (TemporalRegion x) (occurrentPartOf y x)) (TemporalRegion y))) // axiom label in BFO2 CLIF: [101-001] " , "(forall (x) (if (TemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [100-001] " ;
rdfs:subClassOf BFO:0000003 ;
owl:disjointWith BFO:0000011 , BFO:0000015 , BFO:0000035 .
BFO:0000011 a owl:Class ;
rdfs:label "spatiotemporal region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "st-region" ;
BFO:0000180 "SpatiotemporalRegion" ;
IAO:0000112 "the spatiotemporal region occupied by a human life"@en , "the spatiotemporal region occupied by a process of cellular meiosis."@en , "the spatiotemporal region occupied by the development of a cancer tumor"@en ;
IAO:0000600 "A spatiotemporal region is an occurrent entity that is part of spacetime. (axiom label in BFO2 Reference: [095-001])"@en ;
IAO:0000601 "All parts of spatiotemporal regions are spatiotemporal regions. (axiom label in BFO2 Reference: [096-001])"@en , "Each spatiotemporal region at any time t projects_onto some spatial region at t. (axiom label in BFO2 Reference: [099-001])"@en , "Each spatiotemporal region projects_onto some temporal region. (axiom label in BFO2 Reference: [098-001])"@en , "Every spatiotemporal region occupies_spatiotemporal_region itself."@en , "Every spatiotemporal region s is such that s occupies_spatiotemporal_region s. (axiom label in BFO2 Reference: [107-002])"@en ;
IAO:0000602 "(forall (r) (if (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion r r))) // axiom label in BFO2 CLIF: [107-002] " , "(forall (x t) (if (SpatioTemporalRegion x) (exists (y) (and (SpatialRegion y) (spatiallyProjectsOntoAt x y t))))) // axiom label in BFO2 CLIF: [099-001] " , "(forall (x y) (if (and (SpatioTemporalRegion x) (occurrentPartOf y x)) (SpatioTemporalRegion y))) // axiom label in BFO2 CLIF: [096-001] " , "(forall (x) (if (SpatioTemporalRegion x) (exists (y) (and (TemporalRegion y) (temporallyProjectsOnto x y))))) // axiom label in BFO2 CLIF: [098-001] " , "(forall (x) (if (SpatioTemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [095-001] " ;
rdfs:subClassOf BFO:0000003 .
BFO:0000015 a owl:Class ;
rdfs:label "process"@en ;
IAO:0000115 "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "process" ;
BFO:0000180 "Process" ;
IAO:0000116 "BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war)"@en ;
IAO:0000112 "a process of cell-division, \\ a beating of the heart"@en , "a process of meiosis"@en , "a process of sleeping"@en , "the course of a disease"@en , "the flight of a bird"@en , "the life of an organism"@en , "your process of aging."@en ;
IAO:0000602 "(iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] " ;
rdfs:subClassOf BFO:0000003 .
BFO:0000035 a owl:Class ;
rdfs:label "process boundary"@en ;
IAO:0000115 "p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "p-boundary" ;
BFO:0000180 "ProcessBoundary" ;
IAO:0000112 "the boundary between the 2nd and 3rd year of your life."@en ;
IAO:0000601 "Every process boundary occupies_temporal_region a zero-dimensional temporal region. (axiom label in BFO2 Reference: [085-002])"@en ;
IAO:0000602 "(forall (x) (if (ProcessBoundary x) (exists (y) (and (ZeroDimensionalTemporalRegion y) (occupiesTemporalRegion x y))))) // axiom label in BFO2 CLIF: [085-002] " , "(iff (ProcessBoundary a) (exists (p) (and (Process p) (temporalPartOf a p) (not (exists (b) (properTemporalPartOf b a)))))) // axiom label in BFO2 CLIF: [084-001] " ;
rdfs:subClassOf BFO:0000003 .
BFO:0000009 a owl:Class ;
rdfs:label "two-dimensional spatial region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "2d-s-region" ;
BFO:0000180 "TwoDimensionalSpatialRegion" ;
IAO:0000112 "an infinitely thin plane in space."@en , "the surface of a sphere-shaped part of space"@en ;
IAO:0000600 "A two-dimensional spatial region is a spatial region that is of two dimensions. (axiom label in BFO2 Reference: [039-001])"@en ;
IAO:0000602 "(forall (x) (if (TwoDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [039-001] " ;
rdfs:subClassOf BFO:0000006 ;
owl:disjointWith BFO:0000028 .
BFO:0000028 a owl:Class ;
rdfs:label "three-dimensional spatial region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "3d-s-region" ;
BFO:0000180 "ThreeDimensionalSpatialRegion" ;
IAO:0000112 "a cube-shaped region of space"@en , "a sphere-shaped region of space,"@en ;
IAO:0000600 "A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001])"@en ;
IAO:0000602 "(forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001] " ;
rdfs:subClassOf BFO:0000006 .
BFO:0000016 a owl:Class ;
rdfs:label "disposition"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "disposition" ;
BFO:0000180 "Disposition" ;
IAO:0000116 "BFO 2 Reference: Dispositions exist along a strength continuum. Weaker forms of disposition are realized in only a fraction of triggering cases. These forms occur in a significant number of cases of a similar type."@en ;
IAO:0000112 "an atom of element X has the disposition to decay to an atom of element Y"@en , "certain people have a predisposition to colon cancer"@en , "children are innately disposed to categorize objects in certain ways."@en , "the cell wall is disposed to filter chemicals in endocytosis and exocytosis"@en ;
IAO:0000600 "b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])"@en ;
IAO:0000601 "If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002])"@en ;
IAO:0000602 "(forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] " , "(forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] " ;
rdfs:subClassOf BFO:0000017 ;
owl:disjointWith BFO:0000023 .
BFO:0000017 a owl:Class ;
rdfs:label "realizable entity"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "realizable" ;
BFO:0000180 "RealizableEntity" ;
IAO:0000112 "the disposition of this piece of metal to conduct electricity."@en , "the disposition of your blood to coagulate"@en , "the function of your reproductive organs"@en , "the role of being a doctor"@en , "the role of this boundary to delineate where Utah and Colorado meet"@en ;
IAO:0000600 "To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])"@en ;
IAO:0000601 "All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])"@en ;
IAO:0000602 "(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] " , "(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] " ;
rdfs:subClassOf BFO:0000020 ;
owl:disjointWith BFO:0000019 .
BFO:0000023 a owl:Class ;
rdfs:label "role"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "role" ;
BFO:0000180 "Role" ;
IAO:0000116 "BFO 2 Reference: One major family of examples of non-rigid universals involves roles, and ontologies developed for corresponding administrative purposes may consist entirely of representatives of entities of this sort. Thus ‘professor’, defined as follows,b instance_of professor at t =Def. there is some c, c instance_of professor role & c inheres_in b at t.denotes a non-rigid universal and so also do ‘nurse’, ‘student’, ‘colonel’, ‘taxpayer’, and so forth. (These terms are all, in the jargon of philosophy, phase sortals.) By using role terms in definitions, we can create a BFO conformant treatment of such entities drawing on the fact that, while an instance of professor may be simultaneously an instance of trade union member, no instance of the type professor role is also (at any time) an instance of the type trade union member role (any more than any instance of the type color is at any time an instance of the type length).If an ontology of employment positions should be defined in terms of roles following the above pattern, this enables the ontology to do justice to the fact that individuals instantiate the corresponding universals – professor, sergeant, nurse – only during certain phases in their lives."@en ;
IAO:0000112 "John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married."@en , "the priest role"@en , "the role of a boundary to demarcate two neighboring administrative territories"@en , "the role of a building in serving as a military target"@en , "the role of a stone in marking a property boundary"@en , "the role of subject in a clinical trial"@en , "the student role"@en ;
IAO:0000600 "b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])"@en ;
IAO:0000602 "(forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] " ;
rdfs:subClassOf BFO:0000017 .
BFO:0000019 a owl:Class ;
rdfs:label "quality"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "quality" ;
BFO:0000180 "Quality" ;
IAO:0000112 "the ambient temperature of this portion of air"@en , "the color of a tomato"@en , "the length of the circumference of your waist"@en , "the mass of this piece of gold."@en , "the shape of your nose"@en , "the shape of your nostril"@en ;
IAO:0000600 "a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])"@en ;
IAO:0000601 "If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])"@en ;
IAO:0000602 "(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] " , "(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] " ;
rdfs:subClassOf BFO:0000020 .
BFO:0000018 a owl:Class ;
rdfs:label "zero-dimensional spatial region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "0d-s-region" ;
BFO:0000180 "ZeroDimensionalSpatialRegion" ;
IAO:0000600 "A zero-dimensional spatial region is a point in space. (axiom label in BFO2 Reference: [037-001])"@en ;
IAO:0000602 "(forall (x) (if (ZeroDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [037-001] " ;
rdfs:subClassOf BFO:0000006 ;
owl:disjointWith BFO:0000028 .
BFO:0000024 a owl:Class ;
rdfs:label "fiat object part"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "fiat-object-part" ;
BFO:0000180 "FiatObjectPart" ;
IAO:0000116 "BFO 2 Reference: Most examples of fiat object parts are associated with theoretically drawn divisions"@en ;
IAO:0000112 "or with divisions drawn by cognitive subjects for practical reasons, such as the division of a cake (before slicing) into (what will become) slices (and thus member parts of an object aggregate). However, this does not mean that fiat object parts are dependent for their existence on divisions or delineations effected by cognitive subjects. If, for example, it is correct to conceive geological layers of the Earth as fiat object parts of the Earth, then even though these layers were first delineated in recent times, still existed long before such delineation and what holds of these layers (for example that the oldest layers are also the lowest layers) did not begin to hold because of our acts of delineation.Treatment of material entity in BFOExamples viewed by some as problematic cases for the trichotomy of fiat object part, object, and object aggregate include: a mussel on (and attached to) a rock, a slime mold, a pizza, a cloud, a galaxy, a railway train with engine and multiple carriages, a clonal stand of quaking aspen, a bacterial community (biofilm), a broken femur. Note that, as Aristotle already clearly recognized, such problematic cases – which lie at or near the penumbra of instances defined by the categories in question – need not invalidate these categories. The existence of grey objects does not prove that there are not objects which are black and objects which are white; the existence of mules does not prove that there are not objects which are donkeys and objects which are horses. It does, however, show that the examples in question need to be addressed carefully in order to show how they can be fitted into the proposed scheme, for example by recognizing additional subdivisions [29"@en , "the division of the brain into regions"@en , "the division of the planet into hemispheres"@en , "the dorsal and ventral surfaces of the body"@en , "the FMA:regional parts of an intact human body."@en , "the upper and lower lobes of the left lung"@en , "the Western hemisphere of the Earth"@en ;
IAO:0000600 "b is a fiat object part = Def. b is a material entity which is such that for all times t, if b exists at t then there is some object c such that b proper continuant_part of c at t and c is demarcated from the remainder of c by a two-dimensional continuant fiat boundary. (axiom label in BFO2 Reference: [027-004])"@en ;
IAO:0000602 "(forall (x) (if (FiatObjectPart x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y) (and (Object y) (properContinuantPartOfAt x y t)))))))) // axiom label in BFO2 CLIF: [027-004] " ;
rdfs:subClassOf BFO:0000040 .
BFO:0000040 a owl:Class ;
rdfs:label "material entity"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "material" ;
BFO:0000180 "MaterialEntity" ;
IAO:0000116 "BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60"@en , "BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity."@en , "BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here."@en ;
IAO:0000112 "a flame"@en , "a forest fire"@en , "a human being"@en , "a hurricane"@en , "a photon"@en , "a puff of smoke"@en , "a sea wave"@en , "a tornado"@en , "an aggregate of human beings."@en , "an energy wave"@en , "an epidemic"@en , "the undetached arm of a human being"@en ;
IAO:0000600 "A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])"@en ;
IAO:0000601 "every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])"@en , "Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])"@en ;
IAO:0000602 "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] " , "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] " , "(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] " ;
rdfs:subClassOf BFO:0000004 ;
owl:disjointWith BFO:0000141 .
BFO:0000026 a owl:Class ;
rdfs:label "one-dimensional spatial region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "1d-s-region" ;
BFO:0000180 "OneDimensionalSpatialRegion" ;
IAO:0000112 "an edge of a cube-shaped portion of space."@en ;
IAO:0000600 "A one-dimensional spatial region is a line or aggregate of lines stretching from one point in space to another. (axiom label in BFO2 Reference: [038-001])"@en ;
IAO:0000602 "(forall (x) (if (OneDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [038-001] " ;
rdfs:subClassOf BFO:0000006 ;
owl:disjointWith BFO:0000028 .
BFO:0000027 a owl:Class ;
rdfs:label "object aggregate"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "object-aggregate" ;
BFO:0000180 "ObjectAggregate" ;
IAO:0000119 "ISBN:978-3-938793-98-5pp124-158#Thomas Bittner and Barry Smith, 'A Theory of Granular Partitions', in K. Munn and B. Smith (eds.), Applied Ontology: An Introduction, Frankfurt/Lancaster: ontos, 2008, 125-158." ;
IAO:0000116 "An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects " , "BFO 2 Reference: object aggregates may gain and lose parts while remaining numerically identical (one and the same individual) over time. This holds both for aggregates whose membership is determined naturally (the aggregate of cells in your body) and aggregates determined by fiat (a baseball team, a congressional committee)."@en ;
IAO:0000112 "a collection of cells in a blood biobank."@en , "a swarm of bees is an aggregate of members who are linked together through natural bonds"@en , "a symphony orchestra"@en , "an organization is an aggregate whose member parts have roles of specific types (for example in a jazz band, a chess club, a football team)"@en , "defined by fiat: the aggregate of members of an organization"@en , "defined through physical attachment: the aggregate of atoms in a lump of granite"@en , "defined through physical containment: the aggregate of molecules of carbon dioxide in a sealed container"@en , "defined via attributive delimitations such as: the patients in this hospital"@en , "the aggregate of bearings in a constant velocity axle joint"@en , "the aggregate of blood cells in your body"@en , "the nitrogen atoms in the atmosphere"@en , "the restaurants in Palo Alto"@en , "your collection of Meissen ceramic plates."@en ;
IAO:0000600 "b is an object aggregate means: b is a material entity consisting exactly of a plurality of objects as member_parts at all times at which b exists. (axiom label in BFO2 Reference: [025-004])"@en ;
IAO:0000602 "(forall (x) (if (ObjectAggregate x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y z) (and (Object y) (Object z) (memberPartOfAt y x t) (memberPartOfAt z x t) (not (= y z)))))) (not (exists (w t_1) (and (memberPartOfAt w x t_1) (not (Object w)))))))) // axiom label in BFO2 CLIF: [025-004] " ;
rdfs:subClassOf BFO:0000040 .
BFO:0000030 a owl:Class ;
rdfs:label "object"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "object" ;
BFO:0000180 "Object" ;
IAO:0000116 "BFO 2 Reference: an object is a maximal causally unified material entity"@en , "BFO 2 Reference: BFO rests on the presupposition that at multiple micro-, meso- and macroscopic scales reality exhibits certain stable, spatially separated or separable material units, combined or combinable into aggregates of various sorts (for example organisms into what are called ‘populations’). Such units play a central role in almost all domains of natural science from particle physics to cosmology. Many scientific laws govern the units in question, employing general terms (such as ‘molecule’ or ‘planet’) referring to the types and subtypes of units, and also to the types and subtypes of the processes through which such units develop and interact. The division of reality into such natural units is at the heart of biological science, as also is the fact that these units may form higher-level units (as cells form multicellular organisms) and that they may also form aggregates of units, for example as cells form portions of tissue and organs form families, herds, breeds, species, and so on. At the same time, the division of certain portions of reality into engineered units (manufactured artifacts) is the basis of modern industrial technology, which rests on the distributed mass production of engineered parts through division of labor and on their assembly into larger, compound units such as cars and laptops. The division of portions of reality into units is one starting point for the phenomenon of counting."@en , "BFO 2 Reference: Each object is such that there are entities of which we can assert unproblematically that they lie in its interior, and other entities of which we can assert unproblematically that they lie in its exterior. This may not be so for entities lying at or near the boundary between the interior and exterior. This means that two objects – for example the two cells depicted in Figure 3 – may be such that there are material entities crossing their boundaries which belong determinately to neither cell. Something similar obtains in certain cases of conjoined twins (see below)."@en , "BFO 2 Reference: To say that b is causally unified means: b is a material entity which is such that its material parts are tied together in such a way that, in environments typical for entities of the type in question,if c, a continuant part of b that is in the interior of b at t, is larger than a certain threshold size (which will be determined differently from case to case, depending on factors such as porosity of external cover) and is moved in space to be at t at a location on the exterior of the spatial region that had been occupied by b at t, then either b’s other parts will be moved in coordinated fashion or b will be damaged (be affected, for example, by breakage or tearing) in the interval between t and t.causal changes in one part of b can have consequences for other parts of b without the mediation of any entity that lies on the exterior of b. Material entities with no proper material parts would satisfy these conditions trivially. Candidate examples of types of causal unity for material entities of more complex sorts are as follows (this is not intended to be an exhaustive list):CU1: Causal unity via physical coveringHere the parts in the interior of the unified entity are combined together causally through a common membrane or other physical covering\\. The latter points outwards toward and may serve a protective function in relation to what lies on the exterior of the entity [13, 47"@en , "BFO 2 Reference: ‘objects’ are sometimes referred to as ‘grains’ [74"@en ;
IAO:0000112 "atom"@en , "cell"@en , "cells and organisms"@en , "engineered artifacts"@en , "grain of sand"@en , "molecule"@en , "organelle"@en , "organism"@en , "planet"@en , "solid portions of matter"@en , "star"@en ;
IAO:0000600 "b is an object means: b is a material entity which manifests causal unity of one or other of the types CUn listed above & is of a type (a material universal) instances of which are maximal relative to this criterion of causal unity. (axiom label in BFO2 Reference: [024-001])"@en ;
rdfs:subClassOf BFO:0000040 .
BFO:0000034 a owl:Class ;
rdfs:label "function"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "function" ;
BFO:0000180 "Function" ;
IAO:0000116 "BFO 2 Reference: In the past, we have distinguished two varieties of function, artifactual function and biological function. These are not asserted subtypes of BFO:function however, since the same function – for example: to pump, to transport – can exist both in artifacts and in biological entities. The asserted subtypes of function that would be needed in order to yield a separate monoheirarchy are not artifactual function, biological function, etc., but rather transporting function, pumping function, etc."@en ;
IAO:0000112 "the function of a hammer to drive in nails"@en , "the function of a heart pacemaker to regulate the beating of a heart through electricity"@en , "the function of amylase in saliva to break down starch into sugar"@en ;
IAO:0000600 "A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])"@en ;
IAO:0000602 "(forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] " ;
rdfs:subClassOf BFO:0000016 .
BFO:0000038 a owl:Class ;
rdfs:label "one-dimensional temporal region"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "1d-t-region" ;
BFO:0000180 "OneDimensionalTemporalRegion" ;
IAO:0000116 "BFO 2 Reference: A temporal interval is a special kind of one-dimensional temporal region, namely one that is self-connected (is without gaps or breaks)."@en ;
IAO:0000112 "the temporal region during which a process occurs."@en ;
IAO:0000600 "A one-dimensional temporal region is a temporal region that is extended. (axiom label in BFO2 Reference: [103-001])"@en ;
IAO:0000602 "(forall (x) (if (OneDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [103-001] " ;
rdfs:subClassOf BFO:0000008 ;
owl:disjointWith BFO:0000148 .
BFO:0000148 a owl:Class ;
rdfs:label "zero-dimensional temporal region"@en ;
altTerm: "temporal instant."@en ;
rdfs:isDefinedBy ;
BFO:0000179 "0d-t-region" ;
BFO:0000180 "ZeroDimensionalTemporalRegion" ;
IAO:0000112 "a temporal region that is occupied by a process boundary"@en , "right now"@en , "the moment at which a child is born"@en , "the moment at which a finger is detached in an industrial accident"@en , "the moment of death."@en ;
IAO:0000600 "A zero-dimensional temporal region is a temporal region that is without extent. (axiom label in BFO2 Reference: [102-001])"@en ;
IAO:0000602 "(forall (x) (if (ZeroDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [102-001] " ;
rdfs:subClassOf BFO:0000008 .
BFO:0000142 a owl:Class ;
rdfs:label "one-dimensional continuant fiat boundary"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "1d-cf-boundary" ;
BFO:0000180 "OneDimensionalContinuantFiatBoundary" ;
IAO:0000112 "all geopolitical boundaries"@en , "all lines of latitude and longitude"@en , "The Equator"@en , "the line separating the outer surface of the mucosa of the lower lip from the outer surface of the skin of the chin."@en , "the median sulcus of your tongue"@en ;
IAO:0000600 "a one-dimensional continuant fiat boundary is a continuous fiat line whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [032-001])"@en ;
IAO:0000602 "(iff (OneDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (OneDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [032-001] " ;
rdfs:subClassOf BFO:0000140 ;
owl:disjointWith BFO:0000146 , BFO:0000147 .
BFO:0000146 a owl:Class ;
rdfs:label "two-dimensional continuant fiat boundary"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "2d-cf-boundary" ;
BFO:0000180 "TwoDimensionalContinuantFiatBoundary" ;
IAO:0000600 "a two-dimensional continuant fiat boundary (surface) is a self-connected fiat surface whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [033-001])"@en ;
IAO:0000602 "(iff (TwoDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (TwoDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [033-001] " ;
rdfs:subClassOf BFO:0000140 .
BFO:0000147 a owl:Class ;
rdfs:label "zero-dimensional continuant fiat boundary"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "0d-cf-boundary" ;
BFO:0000180 "ZeroDimensionalContinuantFiatBoundary" ;
IAO:0000116 "zero dimension continuant fiat boundaries are not spatial points. Considering the example 'the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet' : There are many frames in which that point is zooming through many points in space. Whereas, no matter what the frame, the quadripoint is always in the same relation to the boundaries of Colorado, Utah, New Mexico, and Arizona."@en ;
IAO:0000112 "the geographic North Pole"@en , "the point of origin of some spatial coordinate system."@en , "the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet"@en ;
IAO:0000600 "a zero-dimensional continuant fiat boundary is a fiat point whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [031-001])"@en ;
IAO:0000602 "(iff (ZeroDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (ZeroDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [031-001] " ;
rdfs:subClassOf BFO:0000140 .
BFO:0000144 a owl:Class ;
rdfs:label "process profile"@en ;
IAO:0000115 "b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "process-profile" ;
BFO:0000180 "ProcessProfile" ;
IAO:0000112 "On a somewhat higher level of complexity are what we shall call rate process profiles, which are the targets of selective abstraction focused not on determinate quality magnitudes plotted over time, but rather on certain ratios between these magnitudes and elapsed times. A speed process profile, for example, is represented by a graph plotting against time the ratio of distance covered per unit of time. Since rates may change, and since such changes, too, may have rates of change, we have to deal here with a hierarchy of process profile universals at successive levels"@en , "One important sub-family of rate process profiles is illustrated by the beat or frequency profiles of cyclical processes, illustrated by the 60 beats per minute beating process of John’s heart, or the 120 beats per minute drumming process involved in one of John’s performances in a rock band, and so on. Each such process includes what we shall call a beat process profile instance as part, a subtype of rate process profile in which the salient ratio is not distance covered but rather number of beat cycles per unit of time. Each beat process profile instance instantiates the determinable universal beat process profile. But it also instantiates multiple more specialized universals at lower levels of generality, selected from rate process profilebeat process profileregular beat process profile3 bpm beat process profile4 bpm beat process profileirregular beat process profileincreasing beat process profileand so on.In the case of a regular beat process profile, a rate can be assigned in the simplest possible fashion by dividing the number of cycles by the length of the temporal region occupied by the beating process profile as a whole. Irregular process profiles of this sort, for example as identified in the clinic, or in the readings on an aircraft instrument panel, are often of diagnostic significance."@en , "The simplest type of process profiles are what we shall call ‘quality process profiles’, which are the process profiles which serve as the foci of the sort of selective abstraction that is involved when measurements are made of changes in single qualities, as illustrated, for example, by process profiles of mass, temperature, aortic pressure, and so on."@en ;
IAO:0000600 "b process_profile_of c holds when b proper_occurrent_part_of c& there is some proper_occurrent_part d of c which has no parts in common with b & is mutually dependent on b& is such that b, c and d occupy the same temporal region (axiom label in BFO2 Reference: [094-005])"@en ;
IAO:0000602 "(forall (x y) (if (processProfileOf x y) (and (properContinuantPartOf x y) (exists (z t) (and (properOccurrentPartOf z y) (TemporalRegion t) (occupiesSpatioTemporalRegion x t) (occupiesSpatioTemporalRegion y t) (occupiesSpatioTemporalRegion z t) (not (exists (w) (and (occurrentPartOf w x) (occurrentPartOf w z))))))))) // axiom label in BFO2 CLIF: [094-005] " , "(iff (ProcessProfile a) (exists (b) (and (Process b) (processProfileOf a b)))) // axiom label in BFO2 CLIF: [093-002] " ;
rdfs:subClassOf BFO:0000015 ;
owl:disjointWith BFO:0000182 .
BFO:0000182 a owl:Class ;
rdfs:label "history"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "history" ;
BFO:0000180 "History" ;
IAO:0000600 "A history is a process that is the sum of the totality of processes taking place in the spatiotemporal region occupied by a material entity or site, including processes on the surface of the entity or within the cavities to which it serves as host. (axiom label in BFO2 Reference: [138-001])"@en ;
rdfs:subClassOf BFO:0000015 .
BFO:0000145 a owl:Class ;
rdfs:label "relational quality"@en ;
IAO:0000115 "b is a relational quality = Def. for some independent continuants c, d and for some time t: b quality_of c at t & b quality_of d at t. (axiom label in BFO2 Reference: [057-001])"@en ;
rdfs:isDefinedBy ;
BFO:0000179 "r-quality" ;
BFO:0000180 "RelationalQuality" ;
IAO:0000112 "John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married."@en , "a marriage bond, an instance of requited love, an obligation between one person and another."@en ;
IAO:0000602 "(iff (RelationalQuality a) (exists (b c t) (and (IndependentContinuant b) (IndependentContinuant c) (qualityOfAt a b t) (qualityOfAt a c t)))) // axiom label in BFO2 CLIF: [057-001] " ;
rdfs:subClassOf BFO:0000019 .
CHEBI:5686 a owl:Class ;
rdfs:label "heterocyclic compound" ;
NIFRID:synonym "compuesto heterociclico" , "compuestos heterociclicos" , "heterocycle" , "Heterocyclic compound" , "heterocyclic compounds" ;
rdfs:subClassOf CHEBI:33595 .
CHEBI:33595 a owl:Class ;
rdfs:label "cyclic compound" ;
NIFRID:synonym "cyclic compounds" ;
rdfs:subClassOf CHEBI:25367 .
CHEBI:7872 a owl:Class ;
rdfs:label "oxytocin" ;
NIFRID:synonym "oxytocin" , "1-({(4R,7S,10S,13S,16S,19R)-19-amino-7-(2-amino-2-oxoethyl)-10-(3-amino-3-oxopropyl)-16-(4-hydroxybenzyl)-13-[(1S)-1-methylpropyl]-6,9,12,15,18-pentaoxo-1,2-dithia-5,8,11,14,17-pentaazacycloicosan-4-yl}carbonyl)-L-prolyl-L-leucylglycinamide" , "3-Isoleucine-8-leucine vasopressin" , "(1-Hemicystine)oxytocin" , "Endopituitrina" , "L-Cysteinyl-L-tyrosyl-L-isoleucyl-L-glutaminyl-L-asparaginyl-L-cysteinyl-L-prolyl-L-leucylglycinamide cyclic(1-6)-disulfide" , "Ocytocin" , "Orasthin" , "OT" , "oxitocina" , "OXT" , "Oxytocin" , "oxytocine" , "oxytocinum" , "Pitocin" , "Piton S" , "Syntocinon" ;
rdfs:subClassOf CHEBI:24533 , CHEBI:25905 .
CHEBI:24533 a owl:Class ;
rdfs:label "heterodetic cyclic peptide" ;
NIFRID:synonym "heterodetic cyclic peptide" , "heterodetic cyclic peptides" , "peptide cyclique heterodetique" , "peptido ciclico heterodetico" ;
rdfs:subClassOf CHEBI:23449 .
CHEBI:25905 a owl:Class ;
rdfs:label "peptide hormone" ;
NIFRID:synonym "peptide hormones" , "polypeptide hormone" ;
rdfs:subClassOf CHEBI:16670 .
CHEBI:9937 a owl:Class ;
rdfs:label "vasopressin" ;
NIFRID:synonym "ADH" , "Antidiuretic hormone" , "arginine vasopressin" , "argipressin" , "AVP" , "beta-Hypophamine" , "Inyectable de vasopresina" , "Solute injectable de vasopressine" , "Vasopressin" , "Vasopressini injectio" , "VP" ;
rdfs:subClassOf CHEBI:24533 , CHEBI:25905 , TEMPIND:Avp .
TEMPIND:Avp a owl:Class ;
rdfs:label "Avp (indicator)" ;
NIFRID:synonym "vasopressin" ;
skos:hiddenLabel "Avp" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
CHEBI:15355 a owl:Class ;
rdfs:label "acetylcholine" ;
NIFRID:synonym "acetylcholine" , "2-acetyloxy-N,N,N-trimethylethanaminium" , "ACETYLCHOLINE" , "Acetylcholine" , "ACh" , "Azetylcholin" , "choline acetate" , "O-Acetylcholine" ;
rdfs:subClassOf CHEBI:35287 , CHEBI:47622 , TEMPIND:ACh .
CHEBI:35287 a owl:Class ;
rdfs:label "acylcholine" ;
NIFRID:synonym "acylcholines" , "an acylcholine" ;
rdfs:subClassOf CHEBI:35267 .
CHEBI:47622 a owl:Class ;
rdfs:label "acetate ester" ;
NIFRID:synonym "acetate" , "acetate esters" , "acetates" , "Acetic ester" , "Acetyl ester" , "acetyl esters" , "an acetyl ester" ;
rdfs:subClassOf CHEBI:33308 .
TEMPIND:ACh a owl:Class ;
rdfs:label "ACh (indicator)" ;
NIFRID:synonym "Acetylcholine" , "Slc18a3" , "VAChT" , "Vesicular acetylcholine transporter" , "ChAT" , "Choline O-acetyltransferase" ;
skos:hiddenLabel "ACh" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
CHEBI:15428 a owl:Class ;
rdfs:label "glycine" ;
NIFRID:synonym "glycine" , "Aminoacetic acid" , "aminoacetic acid" , "Aminoessigsaeure" , "aminoethanoic acid" , "G" , "Gly" , "Glycin" , "GLYCINE" , "Glycine" , "Glycocoll" , "Glykokoll" , "Glyzin" , "H2N-CH2-COOH" , "Hgly" , "Leimzucker" ;
rdfs:subClassOf CHEBI:26650 , CHEBI:33704 , CHEBI:83813 .
CHEBI:26650 a owl:Class ;
rdfs:label "serine family amino acid" ;
NIFRID:synonym "3-phosphoglycerate family amino acid" , "3-phosphoglycerate family amino acids" , "serine family amino acids" ;
rdfs:subClassOf CHEBI:33704 .
CHEBI:33704 a owl:Class ;
rdfs:label "alpha-amino acid" ;
NIFRID:synonym "alpha-amino acid" , "alpha-amino acids" , "alpha-amino carboxylic acids" , "Amino acid" , "Amino acids" ;
rdfs:subClassOf CHEBI:33709 .
CHEBI:83813 a owl:Class ;
rdfs:label "proteinogenic amino acid" ;
NIFRID:synonym "canonical amino acid" , "canonical amino acids" , "proteinogenic amino acids" ;
rdfs:subClassOf CHEBI:33709 .
CHEBI:15705 a owl:Class ;
rdfs:label "L-alpha-amino acid" ;
NIFRID:synonym "L-alpha-amino acid" , "L-2-Amino acid" , "L-alpha-amino acids" , "L-Amino acid" ;
rdfs:subClassOf CHEBI:33704 .
CHEBI:16015 a owl:Class ;
rdfs:label "L-glutamic acid" ;
NIFRID:synonym "L-glutamic acid" , "(2S)-2-aminopentanedioic acid" , "(S)-2-aminopentanedioic acid" , "(S)-glutamic acid" , "acide glutamique" , "acido glutamico" , "acidum glutamicum" , "E" , "Glu" , "Glutamate" , "GLUTAMIC ACID" , "glutamic acid" , "L-Glu" , "L-Glutamic acid" , "L-Glutaminic acid" , "L-Glutaminsaeure" ;
rdfs:subClassOf CHEBI:83813 , CHEBI:15705 , CHEBI:18237 , CHEBI:24318 , TEMPIND:Glutamate .
CHEBI:18237 a owl:Class ;
rdfs:label "glutamic acid" ;
NIFRID:synonym "E" , "Glu" , "Glutamate" , "glutamic acid" , "2-Aminoglutaric acid" , "2-aminopentanedioic acid" , "DL-Glutamic acid" , "DL-Glutaminic acid" , "Glutamic acid" , "Glutaminic acid" , "Glutaminsaeure" ;
rdfs:subClassOf CHEBI:33704 , CHEBI:26167 .
CHEBI:24318 a owl:Class ;
rdfs:label "glutamine family amino acid" ;
NIFRID:synonym "glutamine family amino acids" ;
rdfs:subClassOf CHEBI:83813 , CHEBI:15705 .
TEMPIND:Glutamate a owl:Class ;
rdfs:label "Glutamate (indicator)" ;
NIFRID:synonym "Glu" , "Slc17a6" , "Vesicular glutamate transporter 2" , "VGluT2" , "GLU" , "L-Glutamate" ;
skos:hiddenLabel "Glu" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
CHEBI:16670 a owl:Class ;
rdfs:label "peptide" ;
NIFRID:synonym "Peptid" , "Peptide" , "peptides" , "peptido" , "peptidos" ;
rdfs:subClassOf CHEBI:37622 , CHEBI:50047 .
CHEBI:37622 a owl:Class ;
rdfs:label "carboxamide" ;
NIFRID:synonym "carboxamides" , "primary carboxamide" ;
rdfs:subClassOf CHEBI:33256 , CHEBI:35352 , CHEBI:36963 .
CHEBI:50047 a owl:Class ;
rdfs:label "organic amino compound" ;
NIFRID:synonym "organic amino compounds" ;
rdfs:subClassOf CHEBI:50860 , CHEBI:35352 .
CHEBI:16865 a owl:Class ;
rdfs:label "gamma-aminobutyric acid" ;
NIFRID:synonym "gamma-aminobutyric acid" , "4-Aminobutanoic acid" , "4-aminobutanoic acid" , "4-Aminobutyric acid" , "4-aminobutyric acid" , "4Abu" , "GABA" , "GAMMA-AMINO-BUTANOIC ACID" , "gamma-amino-n-butyric acid" , "gamma-aminobutanoic acid" , "gamma-Aminobuttersaeure" , "gamma-Aminobutyric acid" , "omega-aminobutyric acid" , "piperidic acid" , "piperidinic acid" ;
rdfs:subClassOf CHEBI:25384 , CHEBI:33707 , TEMPIND:GABA .
CHEBI:25384 a owl:Class ;
rdfs:label "monocarboxylic acid" ;
NIFRID:synonym "monocarboxylic acids" ;
rdfs:subClassOf CHEBI:33575 .
CHEBI:33707 a owl:Class ;
rdfs:label "gamma-amino acid" ;
NIFRID:synonym "gamma-amino acid" , "gamma-amino acids" ;
rdfs:subClassOf CHEBI:83820 .
TEMPIND:GABA a owl:Class ;
rdfs:label "GABA (indicator)" ;
NIFRID:synonym "gamma-Aminobutyric acid" , "Gad2" , "Slc32a1" , "VGAT" , "Glutamate decarboxylase 2" , "Vesicular inhibitory amino acid transporter" ;
skos:hiddenLabel "GABA" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
CHEBI:26167 a owl:Class ;
rdfs:label "polar amino acid" ;
NIFRID:synonym "polar amino acid" , "polar amino acids" , "polar amino-acid" , "polar amino-acids" ;
rdfs:subClassOf CHEBI:33709 .
CHEBI:18243 a owl:Class ;
rdfs:label "dopamine" ;
NIFRID:synonym "dopamine" , "2-(3,4-Dihydroxyphenyl)ethylamine" , "2-(3,4-dihydroxyphenyl)ethylamine" , "3,4-Dihydroxyphenethylamine" , "3-Hydroxytyramine" , "4-(2-Aminoethyl)-1,2-benzenediol" , "4-(2-aminoethyl)-1,2-benzenediol" , "4-(2-Aminoethyl)benzene-1,2-diol" , "4-(2-aminoethyl)benzene-1,2-diol" , "4-(2-aminoethyl)catechol" , "4-(2-aminoethyl)pyrocatechol" , "Deoxyepinephrine" , "Dopamin" , "dopamina" , "Dopamine" , "Dopamine HCl" , "dopaminum" , "Dophamine" , "Hydroxytyramin" , "Intropin" , "Oxytyramine" , "Revimine" ;
rdfs:subClassOf CHEBI:33567 , NIFSTD:sao1456045859 .
CHEBI:33567 a owl:Class ;
rdfs:label "catecholamine" ;
NIFRID:synonym "Catecholamine" , "catecholamines" ;
rdfs:subClassOf CHEBI:25375 , CHEBI:33566 , CHEBI:64365 .
NIFSTD:sao1456045859 a owl:Class ;
rdfs:label "Catecholamine" ;
NIFRID:synonym "Catecholamine" ;
rdfs:subClassOf NIFSTD:sao1430127373 .
CHEBI:22563 a owl:Class ;
rdfs:label "anion" ;
NIFRID:synonym "anion" , "Anion" , "Anionen" , "aniones" , "anions" ;
rdfs:subClassOf CHEBI:24870 .
CHEBI:24870 a owl:Class ;
rdfs:label "ion" ;
NIFRID:synonym "ion" , "Ion" , "Ionen" , "ionen" , "iones" , "ions" ;
rdfs:subClassOf CHEBI:23367 .
CHEBI:22660 a owl:Class ;
rdfs:label "aspartic acid" ;
NIFRID:synonym "aspartic acid" , "2-aminobutanedioic acid" , "(+-)-Aspartic acid" , "(R,S)-Aspartic acid" , "Asp" , "Aspartic acid" , "D" , "DL-Aminosuccinic acid" , "DL-Asparagic acid" ;
rdfs:subClassOf CHEBI:33704 , CHEBI:26167 , CHEBI:66873 .
CHEBI:66873 a owl:Class ;
rdfs:label "C4-dicarboxylic acid" ;
NIFRID:synonym "C4-dicarboxylic acids" ;
rdfs:subClassOf CHEBI:35692 .
CHEBI:22728 a owl:Class ;
rdfs:label "benzopyrrole" ;
NIFRID:synonym "benzopyrroles" ;
rdfs:subClassOf CHEBI:27171 , CHEBI:38101 , CHEBI:38180 .
CHEBI:27171 a owl:Class ;
rdfs:label "organic heterobicyclic compound" ;
NIFRID:synonym "heterobicyclic compounds" , "organic heterobicyclic compounds" ;
rdfs:subClassOf CHEBI:33672 , CHEBI:38166 .
CHEBI:38101 a owl:Class ;
rdfs:label "organonitrogen heterocyclic compound" ;
NIFRID:synonym "heterocyclic organonitrogen compounds" , "organonitrogen heterocyclic compounds" ;
rdfs:subClassOf CHEBI:24532 , CHEBI:35352 .
CHEBI:38180 a owl:Class ;
rdfs:label "polycyclic heteroarene" ;
NIFRID:synonym "polycyclic heteroarenes" ;
rdfs:subClassOf CHEBI:33833 .
CHEBI:23367 a owl:Class ;
rdfs:label "Molecular entity" ;
NIFRID:synonym "entidad molecular" , "entidades moleculares" , "entite moleculaire" , "molecular entities" , "molecular entity" , "molecule" , "molekulare Entitaet" ;
ilxtr:hasIlxId ILX:0107064 ;
ilxtr:hasExistingId CHEBI:23367 , ILX:0107064 ;
ilxtr:hasIlxPreferredId CHEBI:23367 ;
rdfs:subClassOf CHEBI:24431 ;
ilxtr:hasExternalId CHEBI:23367 .
CHEBI:24431 a owl:Class ;
rdfs:label "chemical entity" ;
NIFRID:synonym "chemical entity" ;
rdfs:subClassOf BFO:0000040 .
CHEBI:23449 a owl:Class ;
rdfs:label "cyclic peptide" ;
NIFRID:synonym "cyclic peptides" , "Cyclopeptid" , "peptide cyclique" , "peptido ciclico" , "Zyklopeptid" ;
rdfs:subClassOf CHEBI:16670 .
CHEBI:23888 a owl:Class ;
rdfs:label "Drug" ;
ilxtr:hasIlxId ILX:0103576 ;
ilxtr:hasExistingId CHEBI:23888 , ILX:0103576 ;
ilxtr:hasIlxPreferredId CHEBI:23888 ;
ilxtr:hasExternalId CHEBI:23888 .
CHEBI:24532 a owl:Class ;
rdfs:label "organic heterocyclic compound" ;
NIFRID:synonym "organic heterocycle" , "organic heterocyclic compounds" ;
rdfs:subClassOf CHEBI:5686 , CHEBI:33285 , CHEBI:33832 .
CHEBI:33285 a owl:Class ;
rdfs:label "heteroorganic entity" ;
NIFRID:synonym "heteroorganic entities" , "organoelement compounds" ;
rdfs:subClassOf CHEBI:50860 .
CHEBI:33832 a owl:Class ;
rdfs:label "organic cyclic compound" ;
NIFRID:synonym "organic cyclic compounds" ;
rdfs:subClassOf CHEBI:33595 , CHEBI:72695 .
CHEBI:24651 a owl:Class ;
rdfs:label "hydroxides" ;
rdfs:subClassOf CHEBI:25806 , CHEBI:33608 , CHEBI:37577 .
CHEBI:25806 a owl:Class ;
rdfs:label "oxygen molecular entity" ;
NIFRID:synonym "oxygen molecular entity" , "oxygen molecular entities" ;
rdfs:subClassOf CHEBI:33304 .
CHEBI:33608 a owl:Class ;
rdfs:label "hydrogen molecular entity" ;
NIFRID:synonym "hydrogen compounds" , "hydrogen molecular entities" ;
rdfs:subClassOf CHEBI:33674 .
CHEBI:37577 a owl:Class ;
rdfs:label "heteroatomic molecular entity" ;
NIFRID:synonym "chemical compound" , "heteroatomic molecular entities" ;
rdfs:subClassOf CHEBI:36357 .
CHEBI:24828 a owl:Class ;
rdfs:label "indoles" ;
rdfs:subClassOf CHEBI:22728 .
CHEBI:24833 a owl:Class ;
rdfs:label "oxoacid" ;
NIFRID:synonym "oxoacid" , "oxacids" , "oxiacids" , "oxo acid" , "oxoacids" , "oxy-acids" , "oxyacids" ;
rdfs:subClassOf CHEBI:24651 .
CHEBI:25367 a owl:Class ;
rdfs:label "molecule" ;
NIFRID:synonym "molecule" , "molecula" , "molecules" , "Molekuel" , "neutral molecular compounds" ;
rdfs:subClassOf CHEBI:24431 , CHEBI:36357 .
CHEBI:36357 a owl:Class ;
rdfs:label "Polyatomic entity" ;
NIFRID:synonym "polyatomic entities" ;
rdfs:subClassOf CHEBI:23367 .
CHEBI:25375 a owl:Class ;
rdfs:label "monoamine molecular messenger" ;
NIFRID:synonym "monamines" , "monoamines" ;
rdfs:subClassOf CHEBI:63534 .
CHEBI:63534 a owl:Class ;
rdfs:label "monoamine" ;
NIFRID:synonym "monoamines" , "naturally occurring monoamine" , "naturally occurring monoamines" ;
rdfs:subClassOf CHEBI:64365 .
CHEBI:33575 a owl:Class ;
rdfs:label "carboxylic acid" ;
NIFRID:synonym "carboxylic acid" , "acide carboxylique" , "acides carboxyliques" , "acido carboxilico" , "acidos carboxilicos" , "Carbonsaeure" , "Carbonsaeuren" , "carboxylic acids" , "Karbonsaeure" , "RC(=O)OH" ;
rdfs:subClassOf CHEBI:36586 , CHEBI:35605 , CHEBI:64709 .
CHEBI:25696 a owl:Class ;
rdfs:label "organic anion" ;
NIFRID:synonym "organic anions" ;
rdfs:subClassOf CHEBI:22563 , CHEBI:25699 .
CHEBI:25699 a owl:Class ;
rdfs:label "organic ion" ;
NIFRID:synonym "organic ions" ;
rdfs:subClassOf CHEBI:24870 , CHEBI:50860 .
CHEBI:25697 a owl:Class ;
rdfs:label "organic cation" ;
NIFRID:synonym "organic cations" ;
rdfs:subClassOf CHEBI:25699 , CHEBI:36916 .
CHEBI:36916 a owl:Class ;
rdfs:label "cation" ;
NIFRID:synonym "cation" , "Cation" , "cationes" , "cations" , "Kation" , "Kationen" ;
rdfs:subClassOf CHEBI:24870 .
CHEBI:50860 a owl:Class ;
rdfs:label "organic molecular entity" ;
NIFRID:synonym "organic compounds" , "organic entity" , "organic molecular entities" ;
rdfs:subClassOf CHEBI:33582 .
CHEBI:25741 a owl:Class ;
rdfs:label "oxide" ;
NIFRID:synonym "oxide" , "oxides" ;
rdfs:subClassOf CHEBI:25806 , CHEBI:37577 .
CHEBI:33304 a owl:Class ;
rdfs:label "chalcogen molecular entity" ;
NIFRID:synonym "chalcogen molecular entity" , "chalcogen compounds" , "chalcogen molecular entities" ;
rdfs:subClassOf CHEBI:33675 .
CHEBI:33709 a owl:Class ;
rdfs:label "amino acid" ;
NIFRID:synonym "amino acids" , "Aminocarbonsaeure" , "Aminokarbonsaeure" , "Aminosaeure" ;
rdfs:subClassOf CHEBI:50047 , CHEBI:33575 .
CHEBI:27162 a owl:Class ;
rdfs:label "tryptamines" ;
rdfs:subClassOf CHEBI:24828 .
CHEBI:33672 a owl:Class ;
rdfs:label "heterobicyclic compound" ;
NIFRID:synonym "heterobicyclic compounds" ;
rdfs:subClassOf CHEBI:5686 , CHEBI:33636 .
CHEBI:38166 a owl:Class ;
rdfs:label "organic heteropolycyclic compound" ;
NIFRID:synonym "organic heteropolycyclic compounds" ;
rdfs:subClassOf CHEBI:24532 , CHEBI:33671 .
CHEBI:28790 a owl:Class ;
rdfs:label "serotonin" ;
NIFRID:synonym "3-(2-Aminoethyl)-1H-indol-5-ol" , "3-(2-aminoethyl)-1H-indol-5-ol" , "5-HT" , "5-Hydroxytryptamine" , "Enteramine" , "SEROTONIN" , "Serotonin" , "serotonine" , "thrombocytin" , "thrombotonin" ;
rdfs:subClassOf CHEBI:25375 , CHEBI:27162 , CHEBI:33853 , CHEBI:50994 , CHEBI:84729 , TEMPIND:Serotonin .
CHEBI:33853 a owl:Class ;
rdfs:label "phenols" ;
NIFRID:synonym "phenols" , "a phenol" , "arenols" , "Aryl alcohol" ;
rdfs:subClassOf CHEBI:33659 , CHEBI:33822 .
CHEBI:50994 a owl:Class ;
rdfs:label "primary amino compound" ;
NIFRID:synonym "primary amino compounds" ;
rdfs:subClassOf CHEBI:50047 .
CHEBI:84729 a owl:Class ;
rdfs:label "hydroxyindoles" ;
rdfs:subClassOf CHEBI:24828 , CHEBI:33822 .
TEMPIND:Serotonin a owl:Class ;
rdfs:label "Serotonin (indicator)" ;
NIFRID:synonym "5-HT" , "Slc6a4" , "SERT" , "5-hydroxytryptamine" , "Sodium-dependent serotonin transporter" ;
skos:hiddenLabel "5-HT" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
CHEBI:29067 a owl:Class ;
rdfs:label "carboxylic acid anion" ;
NIFRID:synonym "a carboxylate" , "carboxylic acid anions" , "carboxylic anions" ;
rdfs:subClassOf CHEBI:25696 , CHEBI:35406 .
CHEBI:35406 a owl:Class ;
rdfs:label "oxoanion" ;
NIFRID:synonym "oxoanion" , "oxoacid anions" , "oxoanions" ;
rdfs:subClassOf CHEBI:25741 , CHEBI:33273 .
CHEBI:32952 a owl:Class ;
rdfs:label "amine" ;
NIFRID:synonym "Amin" , "Amine" , "amines" , "an amine" , "Substituted amine" ;
rdfs:subClassOf CHEBI:50047 .
CHEBI:32988 a owl:Class ;
rdfs:label "amide" ;
NIFRID:synonym "Amide" , "amides" ;
rdfs:subClassOf CHEBI:51143 .
CHEBI:51143 a owl:Class ;
rdfs:label "nitrogen molecular entity" ;
NIFRID:synonym "nitrogen compounds" , "nitrogen molecular entities" , "Nitrogenous compounds" ;
rdfs:subClassOf CHEBI:33302 .
CHEBI:33243 a owl:Class ;
rdfs:label "natural product" ;
rdfs:subClassOf CHEBI:50860 .
CHEBI:33256 a owl:Class ;
rdfs:label "primary amide" ;
NIFRID:synonym "primary amide" , "primary amides" ;
rdfs:subClassOf CHEBI:32988 .
CHEBI:33273 a owl:Class ;
rdfs:label "polyatomic anion" ;
NIFRID:synonym "polyatomic anions" ;
rdfs:subClassOf CHEBI:22563 , CHEBI:36358 .
CHEBI:36358 a owl:Class ;
rdfs:label "polyatomic ion" ;
NIFRID:synonym "polyatomic ions" ;
rdfs:subClassOf CHEBI:24870 , CHEBI:36357 .
CHEBI:33302 a owl:Class ;
rdfs:label "pnictogen molecular entity" ;
NIFRID:synonym "pnictogen molecular entity" , "pnictogen molecular entities" ;
rdfs:subClassOf CHEBI:33675 .
CHEBI:33675 a owl:Class ;
rdfs:label "p-block molecular entity" ;
NIFRID:synonym "p-block compounds" , "p-block molecular entities" , "p-block molecular entitiy" ;
rdfs:subClassOf CHEBI:33579 .
CHEBI:33308 a owl:Class ;
rdfs:label "carboxylic ester" ;
NIFRID:synonym "a carboxylic ester" , "carboxylic acid esters" , "Carboxylic ester" , "carboxylic esters" ;
rdfs:subClassOf CHEBI:35701 , CHEBI:36586 .
CHEBI:35701 a owl:Class ;
rdfs:label "ester" ;
NIFRID:synonym "Ester" , "Esters" , "esters" ;
rdfs:subClassOf CHEBI:36963 .
CHEBI:36586 a owl:Class ;
rdfs:label "carbonyl compound" ;
NIFRID:synonym "carbonyl compounds" ;
rdfs:subClassOf CHEBI:36963 , CHEBI:36587 .
CHEBI:33558 a owl:Class ;
rdfs:label "alpha-amino-acid anion" ;
NIFRID:synonym "alpha-amino acid anion" , "alpha-amino acid anions" , "alpha-amino-acid anions" ;
rdfs:subClassOf CHEBI:37022 .
CHEBI:37022 a owl:Class ;
rdfs:label "amino-acid anion" ;
NIFRID:synonym "amino acid anion" , "amino acid anions" , "amino-acid anions" ;
rdfs:subClassOf CHEBI:29067 , CHEBI:35352 .
CHEBI:33566 a owl:Class ;
rdfs:label "catechols" ;
NIFRID:synonym "1,2-benzenediols" , "a catechol" , "benzene-1,2-diols" ;
rdfs:subClassOf CHEBI:33570 .
CHEBI:33570 a owl:Class ;
rdfs:label "benzenediols" ;
rdfs:subClassOf CHEBI:33853 .
CHEBI:64365 a owl:Class ;
rdfs:label "aralkylamino compound" ;
NIFRID:synonym "aralkylamino compounds" ;
rdfs:subClassOf CHEBI:50047 .
CHEBI:35605 a owl:Class ;
rdfs:label "carbon oxoacid" ;
NIFRID:synonym "carbon oxoacids" , "oxoacids of carbon" ;
rdfs:subClassOf CHEBI:24833 , CHEBI:36963 .
CHEBI:64709 a owl:Class ;
rdfs:label "organic acid" ;
NIFRID:synonym "organic acids" ;
rdfs:subClassOf CHEBI:50860 .
CHEBI:33579 a owl:Class ;
rdfs:label "main group molecular entity" ;
NIFRID:synonym "main group compounds" , "main group molecular entities" ;
rdfs:subClassOf CHEBI:23367 .
CHEBI:33582 a owl:Class ;
rdfs:label "carbon group molecular entity" ;
NIFRID:synonym "carbon group molecular entity" , "carbon group molecular entities" ;
rdfs:subClassOf CHEBI:33675 .
CHEBI:33674 a owl:Class ;
rdfs:label "s-block molecular entity" ;
NIFRID:synonym "s-block molecular entity" , "s-block compounds" , "s-block molecular entities" ;
rdfs:subClassOf CHEBI:33579 .
CHEBI:33635 a owl:Class ;
rdfs:label "polycyclic compound" ;
NIFRID:synonym "polycyclic compounds" ;
rdfs:subClassOf CHEBI:33595 .
CHEBI:33636 a owl:Class ;
rdfs:label "bicyclic compound" ;
NIFRID:synonym "bicyclic compounds" ;
rdfs:subClassOf CHEBI:33595 .
CHEBI:33655 a owl:Class ;
rdfs:label "aromatic compound" ;
NIFRID:synonym "aromatic compounds" , "aromatic molecular entity" , "aromatics" , "aromatische Verbindungen" ;
rdfs:subClassOf CHEBI:33595 .
CHEBI:33659 a owl:Class ;
rdfs:label "organic aromatic compound" ;
NIFRID:synonym "organic aromatic compounds" ;
rdfs:subClassOf CHEBI:33832 , CHEBI:33655 .
CHEBI:33671 a owl:Class ;
rdfs:label "heteropolycyclic compound" ;
NIFRID:synonym "heteropolycyclic compounds" , "polyheterocyclic compounds" ;
rdfs:subClassOf CHEBI:5686 , CHEBI:33635 .
CHEBI:33694 a owl:Class ;
rdfs:label "biomacromolecule" ;
NIFRID:synonym "biomacromolecules" , "biopolymer" , "Biopolymere" , "biopolymers" ;
rdfs:subClassOf CHEBI:50860 , CHEBI:33839 .
CHEBI:33839 a owl:Class ;
rdfs:label "macromolecule" ;
NIFRID:synonym "macromolecule" , "macromolecules" , "polymer" , "polymer molecule" , "polymers" ;
rdfs:subClassOf CHEBI:36357 .
CHEBI:33695 a owl:Class ;
rdfs:label "information biomacromolecule" ;
NIFRID:synonym "genetically encoded biomacromolecules" , "genetically encoded biopolymers" , "information biomacromolecules" , "information biopolymers" , "information macromolecule" , "information macromolecules" ;
rdfs:subClassOf CHEBI:33694 .
CHEBI:33702 a owl:Class ;
rdfs:label "polyatomic cation" ;
NIFRID:synonym "polyatomic cations" ;
rdfs:subClassOf CHEBI:36916 , CHEBI:36358 .
CHEBI:83820 a owl:Class ;
rdfs:label "non-proteinogenic amino acid" ;
NIFRID:synonym "non-canonical amino acid" , "non-canonical amino acids" , "non-canonical amino-acid" , "non-canonical amino-acids" , "non-coded amino acid" , "non-coded amino acids" , "non-coded amino-acid" , "non-coded amino-acids" , "non-proteinogenic amino acids" , "non-proteinogenic amino-acid" , "non-proteinogenic amino-acids" ;
rdfs:subClassOf CHEBI:33709 .
CHEBI:33822 a owl:Class ;
rdfs:label "organic hydroxy compound" ;
NIFRID:synonym "hydroxy compounds" , "organic alcohol" , "organic hydroxy compounds" ;
rdfs:subClassOf CHEBI:24651 , CHEBI:50860 .
CHEBI:72695 a owl:Class ;
rdfs:label "organic molecule" ;
NIFRID:synonym "organic compounds" , "organic compound" , "organic molecules" ;
rdfs:subClassOf CHEBI:25367 , CHEBI:50860 .
CHEBI:33833 a owl:Class ;
rdfs:label "heteroarene" ;
NIFRID:synonym "hetarenes" , "heteroarenes" ;
rdfs:subClassOf CHEBI:24532 , CHEBI:33659 .
CHEBI:35267 a owl:Class ;
rdfs:label "quaternary ammonium ion" ;
NIFRID:synonym "quaternary ammonium ion" , "a quaternary ammonium" , "Quaternary amine" , "quaternary ammonium ions" ;
rdfs:subClassOf CHEBI:25697 , CHEBI:35274 .
CHEBI:35274 a owl:Class ;
rdfs:label "ammonium ion derivative" ;
NIFRID:synonym "ammonium ion derivatives" , "azanium ion derivative" , "azanium ion derivatives" ;
rdfs:subClassOf CHEBI:51143 , CHEBI:33702 .
CHEBI:35352 a owl:Class ;
rdfs:label "organonitrogen compound" ;
NIFRID:synonym "organonitrogen compounds" , "organonitrogens" ;
rdfs:subClassOf CHEBI:33285 , CHEBI:51143 .
CHEBI:36963 a owl:Class ;
rdfs:label "organooxygen compound" ;
NIFRID:synonym "organooxygen compound" , "organooxygen compounds" ;
rdfs:subClassOf CHEBI:25806 , CHEBI:36962 .
CHEBI:35692 a owl:Class ;
rdfs:label "dicarboxylic acid" ;
NIFRID:synonym "Dicarboxylic acid" , "dicarboxylic acids" ;
rdfs:subClassOf CHEBI:33575 , CHEBI:131927 .
CHEBI:131927 a owl:Class ;
rdfs:label "dicarboxylic acids and O-substituted derivatives" ;
NIFRID:synonym "dicarboxylic acids and derivatives" ;
rdfs:subClassOf CHEBI:36586 .
CHEBI:35693 a owl:Class ;
rdfs:label "dicarboxylic acid anion" ;
NIFRID:synonym "dicarboxylic acid anion" , "dicarboxylic acid anions" ;
rdfs:subClassOf CHEBI:29067 .
CHEBI:36587 a owl:Class ;
rdfs:label "organic oxo compound" ;
NIFRID:synonym "organic oxo compounds" , "oxo compounds" ;
rdfs:subClassOf CHEBI:72695 .
CHEBI:36962 a owl:Class ;
rdfs:label "organochalcogen compound" ;
NIFRID:synonym "organochalcogen compound" , "organochalcogen compounds" ;
rdfs:subClassOf CHEBI:33285 , CHEBI:33304 .
CHEBI:48705 a owl:Class ;
rdfs:label "Agonist role" ;
ilxtr:hasIlxId ILX:0100414 ;
ilxtr:hasExistingId CHEBI:48705 , ILX:0100414 ;
ilxtr:hasIlxPreferredId CHEBI:48705 ;
ilxtr:hasExternalId CHEBI:48705 .
CHEBI:64628 a owl:Class ;
rdfs:label "somatostatin" ;
NIFRID:synonym "somatostatin" , "Ala-Gly-cyclo-[Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys]" , "L-alanyl-N-[(4R,7S,10S,13S,16S,19S,22S,25S,28S,31S,34S,37R)-19,34-bis(4-aminobutyl)-31-(2-amino-2-oxoethyl)-13,25,28-tribenzyl-4-carboxy-10,16-bis[(1R)-1-hydroxyethyl]-7-(hydroxymethyl)-22-(1H-indol-3-ylmethyl)-6,9,12,15,18,21,24,27,30,33,36-undecaoxo-1,2-dithia-5,8,11,14,17,20,23,26,29,32,35-undecaazacyclooctatriacontan-37-yl]glycinamide" , "L-alanylglycyl-L-cysteinyl-L-lysyl-L-asparaginyl-L-phenylalanyl-L-phenylalanyl-L-tryptophyl-L-lysyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-cysteine cyclic (3-14) disulfide" , "Somatostatin-1" , "Somatostatin-14" , "somatostatina" , "somatostatine" , "somatostatinum" , "Synthetic growth hormone release-inhibiting hormone" ;
rdfs:subClassOf CHEBI:24533 , CHEBI:25905 , TEMPIND:Sst .
TEMPIND:Sst a owl:Class ;
rdfs:label "somatostatin (indicator)" ;
NIFRID:synonym "somatostatin" , "Sst" , "SOM" ;
skos:hiddenLabel "Sst" ;
rdfs:subClassOf ilxtr:PhenotypeIndicator .
CHEBI:132943 a owl:Class ;
rdfs:label "aspartate" ;
rdfs:subClassOf CHEBI:33558 , CHEBI:35693 .
femrep:30 a owl:Class ;
rdfs:label "neuron type femrep 30" ;
skos:prefLabel "T1-L2 spinal cord to paravertebral sympathetic chain of T12-L1 via white rami communicantes" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-198 , _:anon-genid-23dc662664fc4769bf28029f4af71604-199 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-170 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Connectivity ambiguity: In the absence of experimental data on the specific spinal cord level from which this connection arises we decided to include all sympathetic spinal cord levels from T1 to L2.
Spatial extent: Houdeau (1998) using retrograde tracing shows that the epicenter of the origin of the postganglionic fibers in the paravertebral sympathetic chain is at T12-L1, but the spread ranges from T10 to L2.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic pre-ganglionic connection goes from lumbar subsegment of spinal cord or thoracic subsegment of spinal cord to First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion via white ramus communicans.
This connection projects from the lumbar subsegment of spinal cord and thoracic subsegment of spinal cord.""" ;
ilxtr:curatorNote "Wulf (2023) https://doi.org/10.3389/fncel.2023.999253 mentioned about the sympathetic innervation “The SPNs reside in the intermediolateral cell column (IML) of thoracolumbar spinal cord segments T1-L2 (McLachlan and Oldfield, 1981; Oldfield and McLachlan, 1981; Anderson et al., 1989)”. In light of the absense of experimental data on the level of the spinal cord that this connection arises from and suggested by the knowledge expert we decided to include all the sympathetic spinal cord from T1-L2. Houdeau (1998) using retrograde tracing shows that the epicenter of the origin of the postganglionic fibers in the paravertebral sympathetic chain is at T12-L1, but the spread ranges from T10 to L2. Alert 1 was suggested by the knowledge domain expert." ;
ilxtr:genLabel "female lumbar subsegment of spinal cord thoracic subsegment of spinal cord (with-axon-in white ramus communicans) (with-axon-presynaptic-element-in L1 sympathetic chain ganglion T12 sympathetic chain ganglion T13 sympathetic chain ganglion) (projecting-onto neuron type femrep 31 neuron type femrep 32 neuron type femrep 33) neuron (implies Rattus norvegicus Sympathetic Pre-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1100 ;
ilxtr:origLabel "neuron type femrep 30" , "from lumbar subsegment of spinal cord or thoracic subsegment of spinal cord to First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion via white ramus communicans" ;
ilxtr:reviewNote "Added Alert Note per spreadsheet.\\nsorry, i stand corrected! first lumbar DRG = http://uri.interlex.org/base/ilx_0104253\\nWrong terms for parasympathetic chain ganglia. those terms are spinal ganglia (DRG).\\nThis seems backwards? also the choice to use subsegment of spinal cord means that individual segments are not listed. is this desired?" ;
ilxtr:sentenceNumber "510" ;
ilxtr:hasAxonLocation ILX:0794916 ;
ilxtr:hasAxonTerminalLocation ILX:0739295 , ILX:0787009 , ILX:0789862 ;
ilxtr:hasForwardConnection femrep:31 , femrep:32 , femrep:33 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-pre ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation UBERON:0007715 , UBERON:0007716 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-170 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-171 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-171 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-172 .
ilxtr:NeuronSparcNlp a owl:Class ;
rdfs:subClassOf ilxtr:NeuronEBM .
_:anon-genid-23dc662664fc4769bf28029f4af71604-172 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-173 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-175 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-173 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-174 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-174 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794916 .
ILX:0794916 a owl:Class ;
rdfs:label "white ramus communicans" ;
rdfs:subClassOf UBERON:0017642 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14487 ;
ilxtr:hasNextNode ILX:0739295 , ILX:0787009 , ILX:0789862 , ILX:0786933 , ILX:0788315 , ILX:0790472 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-175 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-176 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-178 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-176 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-177 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-177 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0739295 .
ILX:0739295 a owl:Class ;
rdfs:label "T13 sympathetic chain ganglion" ;
NIFRID:synonym "Thirteenth thoracic ganglion" , "thirteenth thoracic sympathetic ganglion" ;
rdfs:subClassOf UBERON:0000961 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14132 ;
ilxtr:hasNextNode ILX:0793832 , UBERON:0001964 , UBERON:0018681 , UBERON:0018683 , ILX:0777086 , ILX:0777087 , ILX:0793227 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-178 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-179 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-181 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-179 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-180 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-180 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0787009 .
ILX:0787009 a owl:Class ;
rdfs:label "T12 sympathetic chain ganglion" ;
NIFRID:synonym "T12 paravertebral ganglion" ;
rdfs:subClassOf UBERON:0000961 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14207 ;
ilxtr:hasNextNode ILX:0793832 , UBERON:0001964 , UBERON:0018681 , UBERON:0018683 , UBERON:0001021 , ILX:0739298 , ILX:0777086 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-181 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-182 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-184 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-182 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-183 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-183 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0789862 .
ILX:0789862 a owl:Class ;
rdfs:label "L1 sympathetic chain ganglion" ;
NIFRID:synonym "L1 sympathetic ganglion" ;
rdfs:subClassOf FMA:6472 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14246 ;
ilxtr:hasNextNode ILX:0793832 , UBERON:0001964 , UBERON:0018681 , UBERON:0018683 , UBERON:0001021 , ILX:0777087 , ILX:0777088 , ILX:0785825 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-184 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-185 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-186 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-185 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
PATO:0000383 a owl:Class ;
rdfs:label "female" ;
rdfs:subClassOf PATO:0001894 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-186 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-187 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-188 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-187 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:31 .
femrep:31 a owl:Class ;
rdfs:label "neuron type femrep 31" ;
skos:prefLabel "paravertebral sympathetic chain of T12-L1 to blood vessel of the upper uterus via lesser OR least splanchnic nerve OR lumbar splanchnic nerve via aorticorenal ganglion via ovarian plexus nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1146 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1147 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1115 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to blood vessel of the upper uterus via least splanchnic nerve, lesser splanchnic nerve, lumbar splanchnic nerve via aorticorenal ganglion via ovarian nerve plexus.
This connection projects from the First lumbar ganglion, Thirteenth thoracic ganglion and Twelfth thoracic ganglion.""" ;
ilxtr:curatorNote "The term \"celiac\" was deleted from \"aorticorenal ganglion\" because it will bring more confusion than clarity here. In Houdeau (1998) in figure 7 the ganglia are depicted together. From the literature it seems celiac ganglion gives rise and is closely connected with aorticorenal so it is safe to include the aorticorenal ganglion here. 2) The original destination \"upper uterine blood vessel of the myometrium or endometrium\" changed to \"blood vessel of the upper uterus\" that covers the vasculature of the upper uterine segment. Houdeau (1998) using retrograde tracing shows that the epicenter of the origin of the postganglionic fibers in the paravertebral sympathetic chain is at T12-L1, but the spread ranges from T10 to L2. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female L1 sympathetic chain ganglion T12 sympathetic chain ganglion T13 sympathetic chain ganglion (with-axons-in aorticorenal ganglion least splanchnic nerve lesser splanchnic nerve lumbar splanchnic nerve ovarian nerve plexus) (with-axon-presynaptic-element-in blood vessel of the upper uterus) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1148 ;
ilxtr:origLabel "neuron type femrep 31" , "from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to blood vessel of the upper uterus via least splanchnic nerve, lesser splanchnic nerve, lumbar splanchnic nerve via aorticorenal ganglion via ovarian nerve plexus" ;
ilxtr:sentenceNumber "488" ;
ilxtr:hasAxonLocation ILX:0793832 , ILX:0794730 , UBERON:0001964 , UBERON:0018681 , UBERON:0018683 ;
ilxtr:hasAxonTerminalLocation ILX:0794765 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0739295 , ILX:0787009 , ILX:0789862 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-188 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-189 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-190 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-189 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:32 .
femrep:32 a owl:Class ;
rdfs:label "neuron type femrep 32" ;
skos:prefLabel "paravertebral sympathetic chain of T12-L1 to smooth muscle of the upper uterus via lesser OR least splanchnic nerve OR lumbar splanchnic nerve via aortecorenal ganglion via ovarian plexus nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1214 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1215 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1183 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to smooth muscle of the upper uterus via least splanchnic nerve, lesser splanchnic nerve, lumbar splanchnic nerve via aorticorenal ganglion via ovarian nerve plexus.
This connection projects from the First lumbar ganglion, Thirteenth thoracic ganglion and Twelfth thoracic ganglion.""" ;
ilxtr:curatorNote "Houdeau (1998) using retrograde tracing shows that the epicenter of the origin of the postganglionic fibers in the paravertebral sympathetic chain is at T12-L1, but the spread ranges from T10 to L2. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female L1 sympathetic chain ganglion T12 sympathetic chain ganglion T13 sympathetic chain ganglion (with-axons-in aorticorenal ganglion least splanchnic nerve lesser splanchnic nerve lumbar splanchnic nerve ovarian nerve plexus) (with-axon-presynaptic-element-in smooth muscle of the upper uterus) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1216 ;
ilxtr:origLabel "neuron type femrep 32" , "from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to smooth muscle of the upper uterus via least splanchnic nerve, lesser splanchnic nerve, lumbar splanchnic nerve via aorticorenal ganglion via ovarian nerve plexus" ;
ilxtr:sentenceNumber "489" ;
ilxtr:hasAxonLocation ILX:0793832 , ILX:0794730 , UBERON:0001964 , UBERON:0018681 , UBERON:0018683 ;
ilxtr:hasAxonTerminalLocation ILX:0794767 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0739295 , ILX:0787009 , ILX:0789862 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-190 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-191 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-192 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-191 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:33 .
femrep:33 a owl:Class ;
rdfs:label "neuron type femrep 33" ;
skos:prefLabel "paravertebral sympathetic chain of T12-L1 to uterine tube infundibulum via lesser OR least splanchnic nerve OR lumbar splanchnic nerve via aortecorenal ganglion via ovarian plexus nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1282 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1283 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1251 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to uterine tube infundibulum via least splanchnic nerve, lesser splanchnic nerve, lumbar splanchnic nerve via aorticorenal ganglion via ovarian nerve plexus.
This connection projects from the First lumbar ganglion, Thirteenth thoracic ganglion and Twelfth thoracic ganglion.""" ;
ilxtr:curatorNote "Houdeau (1998) using retrograde tracing shows that the epicenter of the origin of the postganglionic fibers in the paravertebral sympathetic chain is at T12-L1, but the spread ranges from T10 to L2. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female L1 sympathetic chain ganglion T12 sympathetic chain ganglion T13 sympathetic chain ganglion (with-axons-in aorticorenal ganglion least splanchnic nerve lesser splanchnic nerve lumbar splanchnic nerve ovarian nerve plexus) (with-axon-presynaptic-element-in uterine tube infundibulum) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1284 ;
ilxtr:origLabel "neuron type femrep 33" , "from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to uterine tube infundibulum via least splanchnic nerve, lesser splanchnic nerve, lumbar splanchnic nerve via aorticorenal ganglion via ovarian nerve plexus" ;
ilxtr:reviewNote "Added species.\\nAdded female for sex. Needs species?" ;
ilxtr:sentenceNumber "487" ;
ilxtr:hasAxonLocation ILX:0793832 , ILX:0794730 , UBERON:0001964 , UBERON:0018681 , UBERON:0018683 ;
ilxtr:hasAxonTerminalLocation UBERON:0003984 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0739295 , ILX:0787009 , ILX:0789862 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-195 .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-194 .
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owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0007715 .
UBERON:0007715 a owl:Class ;
rdfs:label "thoracic subsegment of spinal cord" ;
NIFRID:synonym "segment part of thoracic spinal cord" ;
rdfs:subClassOf UBERON:0005844 , UBERON:0003038 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154998 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154999 ;
ilxtr:hasNextNode ILX:0794916 , UBERON:0018683 , UBERON:0018679 .
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rdf:rest rdf:nil .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-197 .
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owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0007716 .
UBERON:0007716 a owl:Class ;
rdfs:label "lumbar subsegment of spinal cord" ;
NIFRID:synonym "segment part of lumbar spinal cord" ;
rdfs:subClassOf UBERON:0005844 , UBERON:0002792 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155000 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155001 ;
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owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre .
ilxtr:neuron-phenotype-sym-pre a owl:Class ;
rdfs:label "Sympathetic Pre-Ganglionic phenotype" ;
skos:hiddenLabel "Sympathetic Pre-Ganglionic" ;
rdfs:subClassOf ilxtr:PreGanglionicPhenotype , ilxtr:SympatheticPhenotype .
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owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
NCBITaxon:10116 a owl:Class ;
rdfs:label "Rattus norvegicus" ;
NIFRID:synonym "rat" , "rats" , "brown rat" , "Mus norvegicus" , "Norway rat" ;
rdfs:subClassOf OBI:0100026 , NCBITaxon:10114 .
ilxtr:composerGenLabel a owl:Class .
ilxtr:curatorNote a owl:Class .
ilxtr:genLabel a owl:Class .
ilxtr:inNLPWorkingSet a owl:Class .
ilxtr:literatureCitation a owl:Class .
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rdf:rest rdf:nil .
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ilxtr:origLabel a owl:Class .
ilxtr:reviewNote a owl:Class .
ilxtr:sentenceNumber a owl:Class .
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owl:onProperty ilxtr:hasAxonLocatedIn ;
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owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793832 .
ILX:0793832 a owl:Class ;
rdfs:label "ovarian nerve plexus" ;
rdfs:subClassOf UBERON:0001810 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14439 ;
ilxtr:hasNextNode ILX:0794765 , ILX:0794767 , UBERON:0003984 , UBERON:0002118 , UBERON:0002119 , UBERON:0000992 , UBERON:0012648 , UBERON:8410010 , UBERON:0006960 , UBERON:0001190 , UBERON:0001305 .
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owl:onProperty ilxtr:hasAxonLocatedIn ;
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owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794730 .
ILX:0794730 a owl:Class ;
rdfs:label "aorticorenal ganglion" ;
rdfs:subClassOf UBERON:0000045 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14467 ;
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owl:onProperty ilxtr:hasAxonLocatedIn ;
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owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0001964 .
UBERON:0001964 a owl:Class ;
rdfs:label "least splanchnic nerve" ;
NIFRID:synonym "least thoracic splanchnic nerve" , "lowest splanchnic nerve" , "nervus splanchnicus imus" , "ramus renalis nervus splanchnici minoris" , "renal branch of lesser splanchnic nerve" , "renal nerve" , "thoracic splanchnic nerve" ;
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owl:onProperty ilxtr:hasAxonLocatedIn ;
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owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018681 .
UBERON:0018681 a owl:Class ;
rdfs:label "lesser splanchnic nerve" ;
NIFRID:synonym "lesser thoracic splanchnic nerve" ;
rdfs:subClassOf UBERON:0018679 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155397 ;
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owl:onProperty partOf: ;
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UBERON:0018683 a owl:Class ;
rdfs:label "lumbar splanchnic nerve" ;
NIFRID:synonym "lumbar splanchnic nerve" ;
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owl:onProperty partOf: ;
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ILX:0794765 a owl:Class ;
rdfs:label "blood vessel of the upper uterus" ;
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owl:someValuesFrom PATO:0000383 .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
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owl:onProperty partOf: ;
owl:someValuesFrom ILX:0739295 .
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owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
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ilxtr:neuron-phenotype-sym-post a owl:Class ;
rdfs:label "Sympathetic Post-Ganglionic phenotype" ;
skos:hiddenLabel "Sympathetic Post-Ganglionic" ;
rdfs:subClassOf ilxtr:PostGanglionicPhenotype , ilxtr:SympatheticPhenotype .
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1198 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1199 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1201 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1202 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794767 .
ILX:0794767 a owl:Class ;
rdfs:label "smooth muscle of the upper uterus" ;
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owl:onProperty ilxtr:hasBiologicalSex ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1212 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1213 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1214 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1215 a owl:Restriction ;
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UBERON:0003984 a owl:Class ;
rdfs:label "uterine tube infundibulum" ;
NIFRID:synonym "infundibulum" , "infundibulum of fallopian tube" , "infundibulum of oviduct" , "infundibulum of uterine tube" , "infundibulum tubae uterinae" ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1280 a owl:Restriction ;
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femrep:34 a owl:Class ;
rdfs:label "neuron type femrep 34" ;
skos:prefLabel "T1-L2 spinal cord to suprarenal ganglion via thoracic splanchnic nerve OR lumbar splanchnic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1340 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1341 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1319 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Connectivity ambiguity: In the absence of experimental data on the specific spinal cord level from which this connection arises we decided to include all sympathetic spinal cord levels from T1 to L2.
Spatial extent: Houdeau (1998) using retrograde tracing shows that the epicenter of the origin of the postganglionic fibers in the paravertebral sympathetic chain is at T12-L1, but the spread ranges from T10 to L2.
Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic pre-ganglionic connection goes from lumbar subsegment of spinal cord or thoracic subsegment of spinal cord to suprarenal ganglion via lumbar splanchnic nerve, thoracic splanchnic nerve.
This connection projects from the lumbar subsegment of spinal cord and thoracic subsegment of spinal cord.""" ;
ilxtr:curatorNote "Wulf (2023) https://doi.org/10.3389/fncel.2023.999253 mentioned about the sympathetic innervation “The SPNs reside in the intermediolateral cell column (IML) of thoracolumbar spinal cord segments T1-L2 (McLachlan and Oldfield, 1981; Oldfield and McLachlan, 1981; Anderson et al., 1989)”. In light of the absense of experimental data on the level of the spinal cord that this connection arises from and suggested by the knowledge expert we decided to include all the sympathetic spinal cord from T1-L2. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female lumbar subsegment of spinal cord thoracic subsegment of spinal cord (with-axons-in lumbar splanchnic nerve thoracic splanchnic nerve) (with-axon-presynaptic-element-in suprarenal ganglion) (projecting-onto neuron type femrep 35) neuron (implies Rattus norvegicus Sympathetic Pre-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1342 ;
ilxtr:origLabel "neuron type femrep 34" , "from lumbar subsegment of spinal cord or thoracic subsegment of spinal cord to suprarenal ganglion via lumbar splanchnic nerve, thoracic splanchnic nerve" ;
ilxtr:sentenceNumber "509" ;
ilxtr:hasAxonLocation UBERON:0018683 , UBERON:0018679 ;
ilxtr:hasAxonTerminalLocation ILX:0794764 ;
ilxtr:hasForwardConnection femrep:35 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-pre ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation UBERON:0007715 , UBERON:0007716 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1319 a owl:Class ;
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1321 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1324 .
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owl:onProperty ilxtr:hasAxonLocatedIn ;
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owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018679 .
UBERON:0018679 a owl:Class ;
rdfs:label "thoracic splanchnic nerve" ;
rdfs:subClassOf UBERON:0003715 , UBERON:0003824 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155394 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155395 ;
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owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794764 .
ILX:0794764 a owl:Class ;
rdfs:label "suprarenal ganglion" ;
rdfs:subClassOf UBERON:0000045 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14475 ;
ilxtr:hasNextNode ILX:0793832 , ILX:0793822 , UBERON:0011926 , UBERON:0018676 .
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owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:35 .
femrep:35 a owl:Class ;
rdfs:label "neuron type femrep 35" ;
skos:prefLabel "suprarenal ganglion to uterine tube infundibulum via ovarian plexus nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1372 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1373 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1359 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote "Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9." ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from suprarenal ganglion to uterine tube infundibulum via ovarian nerve plexus.
This connection projects from the suprarenal ganglion.""" ;
ilxtr:genLabel "female suprarenal ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in uterine tube infundibulum) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1374 ;
ilxtr:origLabel "neuron type femrep 35" , "from suprarenal ganglion to uterine tube infundibulum via ovarian nerve plexus" ;
ilxtr:sentenceNumber "499" ;
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ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0794764 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1369 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1368 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1369 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1370 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1370 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1371 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1371 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794764 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1372 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1373 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1374 rdf:first ILX:0794764 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1375 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1375 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1376 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1376 rdf:first ILX:0793832 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1377 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1377 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1378 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1378 rdf:first UBERON:0003984 ;
rdf:rest rdf:nil .
femrep:36 a owl:Class ;
rdfs:label "neuron type femrep 36" ;
skos:prefLabel "T9-T10 spinal cord to paravertebral sympathetic chain of T12-L1 via white communicating rami of T9-T10" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1406 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1407 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1379 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Spatial extent: In Gerandai (1998) https://doi.org/10.1159/000054372 they observed a spread of labeled cells in the IML from T4-L3 but the epicenter was T9-T10.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic pre-ganglionic connection goes from T10 segment of thoracic spinal cord or T9 segment of thoracic spinal cord to First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion via white communicating ramus of ninth thoracic spinal nerve, white communicating ramus of tenth thoracic spinal nerve.
This connection projects from the T9 segment of thoracic spinal cord and T10 segment of thoracic spinal cord.""" ;
ilxtr:curatorNote "Originally the population had as via \"splanchnic nerve\" but considering it is a communication between spinal cord and sympathetic chain \"white rami communicantes\" is representing the route more appropriately. \"In Gerandai (1998) 10.1159/000054372 they observed labeled cells in the IML from T4-L3 but the epicenter was T9-T10." ;
ilxtr:genLabel "female T10 segment of thoracic spinal cord T9 segment of thoracic spinal cord (with-axons-in white communicating ramus of ninth thoracic spinal nerve white communicating ramus of tenth thoracic spinal nerve) (with-axon-presynaptic-element-in L1 sympathetic chain ganglion T12 sympathetic chain ganglion T13 sympathetic chain ganglion) (projecting-onto neuron type femrep 37) neuron (implies Rattus norvegicus Sympathetic Pre-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1408 ;
ilxtr:origLabel "neuron type femrep 36" , "from T10 segment of thoracic spinal cord or T9 segment of thoracic spinal cord to First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion via white communicating ramus of ninth thoracic spinal nerve, white communicating ramus of tenth thoracic spinal nerve" ;
ilxtr:reviewNote "Sue and Ilias discuss the evolution of this population; and added alertNote as well as updated the Statement label for the population to match the spreadsheet.\\nMissing parasympathetic chain ganglia terms as destination. I think the lumbar & T13 ganglia are incorrect terms (aren't they pre-vertebral spinal ganglia?)" ;
ilxtr:sentenceNumber "508" ;
ilxtr:hasAxonLocation ILX:0793215 , ILX:0793216 ;
ilxtr:hasAxonTerminalLocation ILX:0739295 , ILX:0787009 , ILX:0789862 ;
ilxtr:hasForwardConnection femrep:37 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-pre ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation UBERON:0006465 , UBERON:0006466 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1379 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1380 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1380 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1381 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1381 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1382 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1384 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1382 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1383 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793215 .
ILX:0793215 a owl:Class ;
rdfs:label "white communicating ramus of ninth thoracic spinal nerve" ;
NIFRID:synonym "T9 white ramus" ;
rdfs:subClassOf FMA:14056 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14299 ;
ilxtr:hasNextNode ILX:0739295 , ILX:0787009 , ILX:0789862 , ILX:0784378 , ILX:0784569 , ILX:0784721 , ILX:0786141 , ILX:0786272 , ILX:0787015 , ILX:0789947 , ILX:0790482 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1384 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1385 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1387 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1385 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1386 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1386 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793216 .
ILX:0793216 a owl:Class ;
rdfs:label "white communicating ramus of tenth thoracic spinal nerve" ;
NIFRID:synonym "T10 white ramus" ;
rdfs:subClassOf FMA:14056 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14300 ;
ilxtr:hasNextNode ILX:0739295 , ILX:0787009 , ILX:0789862 , ILX:0786933 , ILX:0784378 , ILX:0784569 , ILX:0784721 , ILX:0786141 , ILX:0786272 , ILX:0787015 , ILX:0789947 , ILX:0790482 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1387 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1388 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1390 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1388 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1389 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1389 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0739295 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1390 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1391 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1393 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1391 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1392 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1392 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0787009 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1393 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1394 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1396 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1394 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1395 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1395 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0789862 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1396 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1397 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1398 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1397 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1398 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1399 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1400 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1399 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:37 .
femrep:37 a owl:Class ;
rdfs:label "neuron type femrep 37" ;
skos:prefLabel "paravertebral sympathetic chain of T12-L1 to left ovary or right ovary via ovarian plexus nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1455 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1456 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1433 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Spatial extent: In Klein (1988) https://doi.org/10.1016/0304-3940(88)90354-0 they observed cells spanning from T10-L4. However, the epicenter was T12-L1. From the references it seems to be a difference in the innervation of right and left ovary.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to left ovary or right ovary via ovarian nerve plexus.
This connection projects from the First lumbar ganglion, Thirteenth thoracic ganglion and Twelfth thoracic ganglion.""" ;
ilxtr:genLabel "female L1 sympathetic chain ganglion T12 sympathetic chain ganglion T13 sympathetic chain ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in left ovary right ovary) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1457 ;
ilxtr:origLabel "neuron type femrep 37" , "from First lumbar ganglion or Thirteenth thoracic ganglion or Twelfth thoracic ganglion to left ovary or right ovary via ovarian nerve plexus" ;
ilxtr:sentenceNumber "490" ;
ilxtr:hasAxonLocation ILX:0793832 ;
ilxtr:hasAxonTerminalLocation UBERON:0002118 , UBERON:0002119 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0739295 , ILX:0787009 , ILX:0789862 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1400 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1401 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1403 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1401 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1402 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1402 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006465 .
UBERON:0006465 a owl:Class ;
rdfs:label "T9 segment of thoracic spinal cord" ;
NIFRID:synonym "ninth thoracic spinal cord segment" , "t9 segment" , "T9 spinal cord segment" ;
rdfs:subClassOf UBERON:0007715 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154902 ;
ilxtr:hasNextNode ILX:0793215 , ILX:0793216 , UBERON:0018680 , ILX:0731969 , ILX:0746880 , ILX:0784694 , ILX:0785076 , ILX:0785435 , ILX:0787443 , ILX:0787969 , ILX:0788972 , ILX:0789287 , ILX:0789482 , ILX:0791390 , ILX:0791808 , ILX:0792132 , ILX:0792193 , ILX:0792543 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1403 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1404 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1404 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1405 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1405 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006466 .
UBERON:0006466 a owl:Class ;
rdfs:label "T10 segment of thoracic spinal cord" ;
NIFRID:synonym "t10 segment" , "T10 spinal cord segment" , "tenth thoracic spinal cord segment" ;
rdfs:subClassOf UBERON:0007715 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154903 ;
ilxtr:hasNextNode UBERON:0018681 , UBERON:0018683 , ILX:0793215 , ILX:0793216 , UBERON:0018680 , UBERON:0002013 , UBERON:0002010 , ILX:0731969 , ILX:0746880 , ILX:0784694 , ILX:0785076 , ILX:0785435 , ILX:0787443 , ILX:0787969 , ILX:0788972 , ILX:0789287 , ILX:0789482 , ILX:0791390 , ILX:0791808 , ILX:0792132 , ILX:0792193 , ILX:0792543 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1406 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1407 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1408 rdf:first "blank" ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1409 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1409 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1410 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1427 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1410 rdf:first UBERON:0006465 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1411 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1411 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1412 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1419 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1412 rdf:first ILX:0793215 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1413 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1413 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1414 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1415 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1414 rdf:first ILX:0739295 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1415 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1416 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1417 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1416 rdf:first ILX:0787009 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1417 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1418 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1418 rdf:first ILX:0789862 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1419 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1420 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1420 rdf:first ILX:0793216 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1421 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1421 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1422 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1423 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1422 rdf:first ILX:0739295 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1423 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1424 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1425 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1424 rdf:first ILX:0787009 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1425 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1426 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1426 rdf:first ILX:0789862 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1427 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1428 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1428 rdf:first UBERON:0006466 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1429 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1429 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1430 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1431 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1430 rdf:first ILX:0793215 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1431 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1432 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1432 rdf:first ILX:0793216 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1433 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1434 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1434 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1435 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1435 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1436 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1438 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1436 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1437 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1437 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793832 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1438 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1439 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1441 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1439 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1440 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1440 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002118 .
UBERON:0002118 a owl:Class ;
rdfs:label "right ovary" ;
rdfs:subClassOf UBERON:0000992 , UBERON:0015212 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154099 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1441 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1442 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1444 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1442 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1443 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1443 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002119 .
UBERON:0002119 a owl:Class ;
rdfs:label "left ovary" ;
rdfs:subClassOf UBERON:0000992 , UBERON:0015212 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154100 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1444 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1445 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1446 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1445 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1446 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1447 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1449 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1447 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1448 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1448 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0739295 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1449 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1450 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1452 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1450 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1451 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1451 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0787009 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1452 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1453 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1453 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1454 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1454 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0789862 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1455 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1456 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1457 rdf:first "blank" ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1458 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1458 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1459 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1466 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1459 rdf:first ILX:0739295 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1460 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1460 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1461 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1461 rdf:first ILX:0793832 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1462 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1462 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1463 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1464 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1463 rdf:first UBERON:0002118 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1464 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1465 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1465 rdf:first UBERON:0002119 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1466 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1467 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1470 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1467 rdf:first ILX:0787009 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1468 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1468 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1469 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1469 rdf:first ILX:0793832 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1470 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1471 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1471 rdf:first ILX:0789862 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1472 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1472 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1473 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1473 rdf:first ILX:0793832 ;
rdf:rest rdf:nil .
femrep:38 a owl:Class ;
rdfs:label "neuron type femrep 38" ;
skos:prefLabel "suprarenal ganglion to right ovary or left ovary via superior ovarian nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1490 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1491 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1474 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Laterality difference: The references indicate a laterality difference in the innervation of the ovary.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.
Alert 3: Pastelin 2017 and 2023 - SON innervation includes both ipsilateral and contralateral postganglionic fibers—i.e., some fibers cross to innervate the ovary from the opposite side's ganglia (Contralateral CG and SG also labeled when injecting True Blue (TB) tracer into the right ovary). OPN innervation appears mostly ipsilateral, with no contralateral fibers reported.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from suprarenal ganglion to left ovary or right ovary via Superior ovarian nerve.
This connection projects from the suprarenal ganglion.""" ;
ilxtr:genLabel "female suprarenal ganglion (with-axon-in SON) (with-axon-presynaptic-element-in left ovary right ovary) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1492 ;
ilxtr:origLabel "neuron type femrep 38" , "from suprarenal ganglion to left ovary or right ovary via Superior ovarian nerve" ;
ilxtr:sentenceNumber "500" ;
ilxtr:hasAxonLocation ILX:0793822 ;
ilxtr:hasAxonTerminalLocation UBERON:0002118 , UBERON:0002119 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0794764 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1474 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1475 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1475 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1476 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1476 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1477 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1479 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1477 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1478 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1478 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793822 .
ILX:0793822 a owl:Class ;
rdfs:label "Superior ovarian nerve" ;
NIFRID:synonym "SON" ;
rdfs:subClassOf UBERON:0001021 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14433 ;
ilxtr:hasNextNode UBERON:0002118 , UBERON:0002119 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1479 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1480 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1482 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1480 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1481 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1481 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002118 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1482 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1483 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1485 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1483 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1484 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1484 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002119 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1485 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1486 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1487 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1486 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1487 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1488 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1488 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1489 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1489 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794764 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1490 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1491 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1492 rdf:first ILX:0794764 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1493 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1493 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1494 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1494 rdf:first ILX:0793822 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1495 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1495 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1496 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1497 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1496 rdf:first UBERON:0002118 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1497 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1498 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1498 rdf:first UBERON:0002119 ;
rdf:rest rdf:nil .
femrep:38-1 a owl:Class ;
rdfs:label "neuron type femrep 38-1" ;
skos:prefLabel "suprarenal ganglion to left ovary via ovarian plexus nerve OR superior ovarian nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1515 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1516 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1499 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Alert 1: The references indicate a laterality difference in the innervation of the ovary.
Alert 2: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from suprarenal ganglion to left ovary via Superior ovarian nerve, ovarian nerve plexus.
This connection projects from the suprarenal ganglion.""" ;
ilxtr:curatorNote "This population could be merged with femrep:38 \"celiac ganglion-superior mesenteric ganglion complex to left ovary via superior ovarian nerve OR ovarian plexus nerve\" based on the source of information. However, this was added as a separate population because we do not have information about the preganglionic population of this connection as it happens in the case of femrep:38 that is the forward connection of femrep:39." ;
ilxtr:genLabel "female suprarenal ganglion (with-axons-in SON ovarian nerve plexus) (with-axon-presynaptic-element-in left ovary) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1517 ;
ilxtr:origLabel "neuron type femrep 38-1" , "from suprarenal ganglion to left ovary via Superior ovarian nerve, ovarian nerve plexus" ;
ilxtr:sentenceNumber "1022" ;
ilxtr:hasAxonLocation ILX:0793832 , ILX:0793822 ;
ilxtr:hasAxonTerminalLocation UBERON:0002119 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0794764 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1499 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1500 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1500 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1501 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1501 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1502 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1504 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1502 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1503 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1503 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793822 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1504 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1505 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1507 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1505 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1506 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1506 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793832 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1507 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1508 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1510 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1508 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1509 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1509 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002119 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1510 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1511 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1512 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1511 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1512 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1513 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1513 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1514 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1514 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794764 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1515 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1516 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1517 rdf:first ILX:0794764 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1518 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1518 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1519 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1522 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1519 rdf:first ILX:0793822 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1520 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1520 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1521 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1521 rdf:first UBERON:0002119 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1522 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1523 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1523 rdf:first ILX:0793832 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1524 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1524 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1525 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1525 rdf:first UBERON:0002119 ;
rdf:rest rdf:nil .
femrep:39 a owl:Class ;
rdfs:label "neuron type femrep 39" ;
skos:prefLabel "T9-T10 spinal cord to celiac ganglion-superior mesenteric ganglion complex or suprarenal ganglion via greater splanchnic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1549 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1550 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1526 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Spatial extent: In Gerandai (1998) 10.1159/000054372 they observed labeled cells in the IML from T4-L3 but the epicenter was T9-T10.
Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female rat, the sympathetic pre-ganglionic connection goes from T10 segment of thoracic spinal cord or T9 segment of thoracic spinal cord to celiac ganglion- superior mesenteric ganglion complex or suprarenal ganglion via greater splanchnic nerve.
This connection projects from the T9 segment of thoracic spinal cord and T10 segment of thoracic spinal cord.""" ;
ilxtr:curatorNote "Originally the population had as via \"splanchnic nerve\" but considering it is a communication between spinal cord and sympathetic chain \"white rami communicantes\" is representing the route more appropriately. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female T10 segment of thoracic spinal cord T9 segment of thoracic spinal cord (with-axon-in greater splanchnic nerve) (with-axon-presynaptic-element-in CSMG suprarenal ganglion) (projecting-onto neuron type femrep 38 neuron type femrep 40) neuron (implies Rattus norvegicus Sympathetic Pre-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1551 ;
ilxtr:origLabel "neuron type femrep 39" , "from T10 segment of thoracic spinal cord or T9 segment of thoracic spinal cord to celiac ganglion- superior mesenteric ganglion complex or suprarenal ganglion via greater splanchnic nerve" ;
ilxtr:reviewNote "I think the problem was that the URI for destination was only \"celiac ganglion\" while in the forward connection is \"celiac ganglion- superior mesenteric ganglion complex\" as it should be in rats. Now corrected it here.\\nthis won't transition to exported. why?\\nthis population needs to be updated." ;
ilxtr:sentenceNumber "507" ;
ilxtr:hasAxonLocation UBERON:0018680 ;
ilxtr:hasAxonTerminalLocation ILX:0794764 , ILX:0793082 ;
ilxtr:hasForwardConnection femrep:38 , femrep:40 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-pre ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation UBERON:0006465 , UBERON:0006466 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
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owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1527 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1527 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1528 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1528 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1529 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1531 .
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owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1530 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1530 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018680 .
UBERON:0018680 a owl:Class ;
rdfs:label "greater splanchnic nerve" ;
NIFRID:synonym "greater thoracic splanchnic nerve" ;
rdfs:subClassOf UBERON:0018679 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155396 ;
ilxtr:hasNextNode ILX:0794764 , ILX:0793082 , ILX:0795514 , UBERON:0002262 , UBERON:0005479 , ILX:0793821 , ILX:0795513 , ILX:0795515 , ILX:0795516 , UBERON:0001236 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1534 .
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owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1533 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1533 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793082 .
ILX:0793082 a owl:Class ;
rdfs:label "celiac ganglion- superior mesenteric ganglion complex" ;
NIFRID:synonym "coeliac-superior mesenteric ganglion complex" , "CSMG" ;
rdfs:subClassOf UBERON:0001806 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14287 ;
ilxtr:hasNextNode ILX:0793832 , ILX:0793822 , ILX:0793563 , ILX:0795009 , ILX:0795011 , UBERON:0018676 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1537 .
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owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1536 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1536 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794764 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1539 .
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owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1539 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1540 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1541 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1540 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:38 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1541 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1542 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1543 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1542 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:40 .
femrep:40 a owl:Class ;
rdfs:label "neuron type femrep 40" ;
skos:prefLabel "celiac ganglion to right ovary or left ovary via ovarian plexus nerve or superior ovarian nerve (minor contribution)" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1583 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1584 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1564 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Laterality difference: The references indicate a laterality difference in the innervation of the ovary.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.
Laterality difference: Pastelin 2017 and 2023 - SON innervation includes both ipsilateral and contralateral postganglionic fibers—i.e., some fibers cross to innervate the ovary from the opposite side's ganglia (Contralateral CG and SG also labeled when injecting True Blue (TB) tracer into the right ovary). OPN innervation appears mostly ipsilateral, with no contralateral fibers reported.\"""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from celiac ganglion- superior mesenteric ganglion complex to left ovary or right ovary via Superior ovarian nerve, ovarian nerve plexus.
This connection projects from the celiac ganglion- superior mesenteric ganglion complex.""" ;
ilxtr:genLabel "female CSMG (with-axons-in SON ovarian nerve plexus) (with-axon-presynaptic-element-in left ovary right ovary) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1585 ;
ilxtr:origLabel "neuron type femrep 40" , "from celiac ganglion- superior mesenteric ganglion complex to left ovary or right ovary via Superior ovarian nerve, ovarian nerve plexus" ;
ilxtr:reviewNote "I mean, how is this different from fem rep 38 (not 39)\\nHow is this different than FemRep-39?" ;
ilxtr:sentenceNumber "501" ;
ilxtr:hasAxonLocation ILX:0793832 , ILX:0793822 ;
ilxtr:hasAxonTerminalLocation UBERON:0002118 , UBERON:0002119 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793082 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1546 .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1545 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1545 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006465 .
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rdf:rest rdf:nil .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1548 .
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owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006466 .
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owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre .
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owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1552 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1560 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1554 .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1556 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1558 .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1562 .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1563 rdf:first UBERON:0018680 ;
rdf:rest rdf:nil .
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owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1565 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1566 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1569 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1567 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1568 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1568 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793822 .
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owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1571 .
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owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793832 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1575 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1573 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1574 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1574 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002118 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1575 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1576 ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1576 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1577 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1577 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002119 .
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owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1580 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1581 ;
rdf:rest rdf:nil .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1582 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1582 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793082 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1583 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1584 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1586 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1586 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1587 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1592 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1588 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1588 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1589 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1590 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1589 rdf:first UBERON:0002118 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1590 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1591 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1591 rdf:first UBERON:0002119 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1592 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1593 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1593 rdf:first ILX:0793832 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1594 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1594 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1595 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1596 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1595 rdf:first UBERON:0002118 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1596 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1597 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1597 rdf:first UBERON:0002119 ;
rdf:rest rdf:nil .
femrep:40-2 a owl:Class ;
rdfs:label "neuron type femrep 40-2" ;
skos:prefLabel "T9-T10 spinal cord to right superior mesenteric ganglion via greater splanchnic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1616 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1617 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1598 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Spatial extent: In Gerandai (1998) 10.1159/000054372 they observed labeled cells in the IML from T4-L3 but the epicenter was T9-T10.
Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic pre-ganglionic connection goes from T10 segment of thoracic spinal cord or T9 segment of thoracic spinal cord to right superior mesenteric ganglion via greater splanchnic nerve.
This connection projects from the T9 segment of thoracic spinal cord and T10 segment of thoracic spinal cord.""" ;
ilxtr:curatorNote "Originally the population had as via \"splanchnic nerve\" but considering it is a communication between spinal cord and sympathetic chain \"white rami communicantes\" is representing the route more appropriately. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female T10 segment of thoracic spinal cord T9 segment of thoracic spinal cord (with-axon-in greater splanchnic nerve) (with-axon-presynaptic-element-in right superior mesenteric ganglion) (projecting-onto neuron type femrep 40-3) neuron (implies Rattus norvegicus Sympathetic Pre-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1618 ;
ilxtr:origLabel "neuron type femrep 40-2" , "from T10 segment of thoracic spinal cord or T9 segment of thoracic spinal cord to right superior mesenteric ganglion via greater splanchnic nerve" ;
ilxtr:sentenceNumber "1024" ;
ilxtr:hasAxonLocation UBERON:0018680 ;
ilxtr:hasAxonTerminalLocation ILX:0795514 ;
ilxtr:hasForwardConnection femrep:40-3 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-pre ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation UBERON:0006465 , UBERON:0006466 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1598 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1599 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1599 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1600 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1600 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1601 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1603 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1601 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1602 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1602 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018680 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1603 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1604 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1606 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1604 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1605 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1605 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0795514 .
ILX:0795514 a owl:Class ;
rdfs:label "right superior mesenteric ganglion" ;
rdfs:subClassOf UBERON:0001805 ;
ilxtr:hasNextNode ILX:0793832 , ILX:0795009 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1606 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1607 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1608 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1607 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1608 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1609 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1610 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1609 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:40-3 .
femrep:40-3 a owl:Class ;
rdfs:label "neuron type femrep 40-3" ;
skos:prefLabel "right superior mesenteric ganglion to right ovary via ovarian plexus nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1642 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1643 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1629 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Spatial extent: In Gerandai (1998) 10.1159/000054372 they observed labeled cells in the IML from T4-L3 but the epicenter was T9-T10.
Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from right superior mesenteric ganglion to right ovary via ovarian nerve plexus.
This connection projects from the right superior mesenteric ganglion.""" ;
ilxtr:curatorNote "Originally the population had as via \"splanchnic nerve\" but considering it is a communication between spinal cord and sympathetic chain \"white rami communicantes\" is representing the route more appropriately. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female right superior mesenteric ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in right ovary) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1644 ;
ilxtr:origLabel "neuron type femrep 40-3" , "from right superior mesenteric ganglion to right ovary via ovarian nerve plexus" ;
ilxtr:sentenceNumber "1023" ;
ilxtr:hasAxonLocation ILX:0793832 ;
ilxtr:hasAxonTerminalLocation UBERON:0002118 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0795514 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1610 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1611 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1613 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1611 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1612 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1612 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006465 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1613 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1614 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1614 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1615 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1615 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006466 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1616 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1617 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1618 rdf:first "blank" ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1619 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1619 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1620 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1625 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1620 rdf:first UBERON:0006465 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1621 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1621 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1622 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1622 rdf:first UBERON:0018680 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1623 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1623 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1624 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1624 rdf:first ILX:0795514 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1625 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1626 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1626 rdf:first UBERON:0006466 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1627 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1627 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1628 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1628 rdf:first UBERON:0018680 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1629 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1630 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1630 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1631 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1631 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1632 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1634 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1632 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1633 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1633 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793832 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1634 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1635 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1637 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1635 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1636 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1636 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002118 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1637 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1638 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1639 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1638 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1639 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1640 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1640 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1641 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1641 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0795514 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1642 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1643 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1644 rdf:first ILX:0795514 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1645 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1645 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1646 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1646 rdf:first ILX:0793832 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1647 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1647 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1648 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1648 rdf:first UBERON:0002118 ;
rdf:rest rdf:nil .
femrep:41 a owl:Class ;
rdfs:label "neuron type femrep 41" ;
skos:prefLabel "T1-L2 spinal cord to paravertebral sympathetic chain of L2-L4 via white rami communicantes" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1677 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1678 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1649 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Connectivity ambiguity: In the absence of experimental data on the specific spinal cord level from which this connection arises, and as suggested by the knowledge expert, we decided to include all sympathetic spinal cord levels from T1 to L2.
Spatial extent: Houdeau (1998) using retrograde tracing shows that the epicenter of the origin of the postganglionic fibers in the paravertebral sympathetic chain is at T12-L1, but the spread ranges from T10 to L2.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic pre-ganglionic connection goes from lumbar subsegment of spinal cord or thoracic subsegment of spinal cord to Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion via white ramus communicans.
This connection projects from the lumbar subsegment of spinal cord and thoracic subsegment of spinal cord.""" ;
ilxtr:curatorNote "In light of the absense of experimental data on the level of the spinal cord that this connection arises from and suggested by the knowledge expert we decided to include all the sympathetic spinal cord from T1-L2." ;
ilxtr:genLabel "female lumbar subsegment of spinal cord thoracic subsegment of spinal cord (with-axon-in white ramus communicans) (with-axon-presynaptic-element-in L2 sympathetic chain ganglion L3 sympathetic chain ganglion L4 sympathetic chain ganglion) (projecting-onto neuron type femrep 42 neuron type femrep 43 neuron type femrep 44) neuron (implies Rattus norvegicus Sympathetic Pre-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1679 ;
ilxtr:origLabel "neuron type femrep 41" , "from lumbar subsegment of spinal cord or thoracic subsegment of spinal cord to Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion via white ramus communicans" ;
ilxtr:sentenceNumber "511" ;
ilxtr:hasAxonLocation ILX:0794916 ;
ilxtr:hasAxonTerminalLocation ILX:0786933 , ILX:0788315 , ILX:0790472 ;
ilxtr:hasForwardConnection femrep:42 , femrep:43 , femrep:44 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-pre ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation UBERON:0007715 , UBERON:0007716 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1649 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1650 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1650 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1651 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1651 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1652 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1654 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1652 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1653 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1653 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794916 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1654 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1655 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1657 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1655 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1656 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1656 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0786933 .
ILX:0786933 a owl:Class ;
rdfs:label "L2 sympathetic chain ganglion" ;
rdfs:subClassOf FMA:6472 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14205 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018683 , UBERON:0001021 , ILX:0777089 , ILX:0785733 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1657 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1658 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1660 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1658 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1659 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1659 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0788315 .
ILX:0788315 a owl:Class ;
rdfs:label "L3 sympathetic chain ganglion" ;
rdfs:subClassOf FMA:6472 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14225 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018683 , ILX:0777090 , ILX:0785932 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1660 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1661 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1663 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1661 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1662 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1662 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0790472 .
ILX:0790472 a owl:Class ;
rdfs:label "L4 sympathetic chain ganglion" ;
rdfs:subClassOf FMA:6472 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14257 ;
ilxtr:hasNextNode UBERON:0018683 , ILX:0777091 , ILX:0788536 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1663 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1664 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1665 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1664 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1665 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1666 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1667 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1666 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:42 .
femrep:42 a owl:Class ;
rdfs:label "neuron type femrep 42" ;
skos:prefLabel "paravertebral sympathetic chain of L2-L4 to smooth muscle of the lower uterus via lumbar splanchnic nerves via hypogastric nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1716 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1717 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1694 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion to smooth muscle of the lower uterus via lumbar splanchnic nerve via hypogastric nerve.
This connection projects from the Fourth lumbar ganglion, Second lumbar ganglion and Third lumbar ganglion.""" ;
ilxtr:genLabel "female L2 sympathetic chain ganglion L3 sympathetic chain ganglion L4 sympathetic chain ganglion (with-axons-in hypogastric nerve lumbar splanchnic nerve) (with-axon-presynaptic-element-in smooth muscle of the lower uterus) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1718 ;
ilxtr:origLabel "neuron type femrep 42" , "from Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion to smooth muscle of the lower uterus via lumbar splanchnic nerve via hypogastric nerve" ;
ilxtr:reviewNote "does this export remove the alternate names for rat (norway rat; rattus norvenigus)? those labels were removed from Composer." ;
ilxtr:sentenceNumber "492" ;
ilxtr:hasAxonLocation UBERON:0018683 , UBERON:0005303 ;
ilxtr:hasAxonTerminalLocation ILX:0794768 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0786933 , ILX:0788315 , ILX:0790472 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1667 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1668 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1669 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1668 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:43 .
femrep:43 a owl:Class ;
rdfs:label "neuron type femrep 43" ;
skos:prefLabel "paravertebral sympathetic chain of L2-L4 to blood vessel of the lower uterus via lumbar splanchnic nerves via hypogastric nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1757 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1758 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1735 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion to blood vessel of the lower uterus via lumbar splanchnic nerve via hypogastric nerve.
This connection projects from the Fourth lumbar ganglion, Second lumbar ganglion and Third lumbar ganglion.""" ;
ilxtr:curatorNote "Curator, Dr. Ilias Ziogas changed the original destination \"lower uterine blood vessel of the myometrium or endometrium\" to \"blood vessel of the lower uterus\" that covers the vasculature of the lower uterine segment. Information on the splanchnic nerve comes from ISBN13:978-1608312948." ;
ilxtr:genLabel "female L2 sympathetic chain ganglion L3 sympathetic chain ganglion L4 sympathetic chain ganglion (with-axons-in hypogastric nerve lumbar splanchnic nerve) (with-axon-presynaptic-element-in blood vessel of the lower uterus) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1759 ;
ilxtr:origLabel "neuron type femrep 43" , "from Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion to blood vessel of the lower uterus via lumbar splanchnic nerve via hypogastric nerve" ;
ilxtr:sentenceNumber "491" ;
ilxtr:hasAxonLocation UBERON:0018683 , UBERON:0005303 ;
ilxtr:hasAxonTerminalLocation ILX:0794766 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0786933 , ILX:0788315 , ILX:0790472 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1669 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1670 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1671 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1670 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:44 .
femrep:44 a owl:Class ;
rdfs:label "neuron type femrep 44" ;
skos:prefLabel "paravertebral sympathetic chain of L2-L4 to uterine cervix via lumbar splanchnic nerves via hypogastric nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1798 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1799 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1776 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote """Data source note: Information on the splanchnic nerve comes from ISBN13:978-1608312948.
Physiological condition: Sympathetic innervation is known to undergo dynamic functional and/or anatomical changes during gestation. This has been observed in several species including rats and humans. Vera et al (1997) https://doi.org/10.1016/s0006-8993(96)01107-9.""" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the sympathetic post-ganglionic connection goes from Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion to uterine cervix via lumbar splanchnic nerve via hypogastric nerve.
This connection projects from the Fourth lumbar ganglion, Second lumbar ganglion and Third lumbar ganglion.""" ;
ilxtr:genLabel "female L2 sympathetic chain ganglion L3 sympathetic chain ganglion L4 sympathetic chain ganglion (with-axons-in hypogastric nerve lumbar splanchnic nerve) (with-axon-presynaptic-element-in uterine cervix) neuron (implies Rattus norvegicus Sympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1800 ;
ilxtr:origLabel "neuron type femrep 44" , "from Fourth lumbar ganglion or Second lumbar ganglion or Third lumbar ganglion to uterine cervix via lumbar splanchnic nerve via hypogastric nerve" ;
ilxtr:sentenceNumber "493" ;
ilxtr:hasAxonLocation UBERON:0018683 , UBERON:0005303 ;
ilxtr:hasAxonTerminalLocation UBERON:0000002 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-sym-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0786933 , ILX:0788315 , ILX:0790472 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1674 .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1673 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1673 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0007715 .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1675 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1676 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1676 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0007716 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1677 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1678 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1680 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1680 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1681 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1690 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1681 rdf:first UBERON:0007715 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1682 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1682 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1683 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1683 rdf:first ILX:0794916 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1684 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1684 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1685 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1686 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1685 rdf:first ILX:0786933 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1686 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1687 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1688 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1687 rdf:first ILX:0788315 ;
rdf:rest rdf:nil .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1689 rdf:first ILX:0790472 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1690 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1691 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1691 rdf:first UBERON:0007716 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1692 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1692 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1693 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1693 rdf:first ILX:0794916 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1694 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1695 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1695 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1696 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1696 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1697 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1699 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1697 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1698 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1698 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0005303 .
UBERON:0005303 a owl:Class ;
rdfs:label "hypogastric nerve" ;
NIFRID:synonym "hypogastric plexus" , "hypogastric nerve plexus" , "nervus hypogastricus" ;
rdfs:subClassOf UBERON:0001816 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154794 ;
ilxtr:hasNextNode ILX:0794768 , ILX:0794766 , UBERON:0000002 , ILX:0793823 , ILX:0794769 , UBERON:0000992 , UBERON:0000995 , UBERON:0002014 , UBERON:0016508 , UBERON:0011926 , ILX:0795056 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1699 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1700 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1702 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1700 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1701 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1701 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018683 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1702 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1703 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1705 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1703 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1704 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1704 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794768 .
ILX:0794768 a owl:Class ;
rdfs:label "smooth muscle of the lower uterus" ;
rdfs:subClassOf ILX:0793769 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14479 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1705 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1706 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1707 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1706 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1707 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1708 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1710 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1708 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1709 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1709 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0786933 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1710 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1711 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1713 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1711 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1712 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1712 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0788315 .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1714 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1715 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1715 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0790472 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1716 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1717 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1718 rdf:first "blank" ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1719 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1719 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1720 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1727 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1720 rdf:first ILX:0786933 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1721 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1721 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1722 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1723 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1723 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1724 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1725 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1725 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1726 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1726 rdf:first ILX:0794768 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1727 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1728 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1731 .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1740 .
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owl:onProperty ilxtr:hasAxonLocatedIn ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1742 a owl:Restriction ;
owl:onProperty partOf: ;
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owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794766 .
ILX:0794766 a owl:Class ;
rdfs:label "blood vessel of the lower uterus" ;
rdfs:subClassOf ILX:0794737 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14477 .
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owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1755 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
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owl:onProperty partOf: ;
owl:someValuesFrom ILX:0790472 .
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owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1758 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1768 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1761 rdf:first ILX:0786933 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1762 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1762 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1763 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1763 rdf:first UBERON:0018683 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1764 .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1765 rdf:first UBERON:0005303 ;
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1767 rdf:first ILX:0794766 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1772 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1770 .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1775 rdf:first UBERON:0018683 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1776 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1777 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1777 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1778 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1778 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1779 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1781 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1779 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1780 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1780 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0005303 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1781 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1782 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1784 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1782 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1783 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1783 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018683 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1784 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1785 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1787 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1785 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1786 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1786 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0000002 .
UBERON:0000002 a owl:Class ;
rdfs:label "uterine cervix" ;
NIFRID:synonym "uterine cervix" , "canalis cervicis uteri" , "caudal segment of uterus" , "cervical canal" , "cervical canal of uterus" , "cervix" , "cervix of uterus" , "cervix uteri" , "neck of uterus" ;
rdfs:subClassOf UBERON:0005156 , UBERON:0001560 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153274 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153275 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153276 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1789 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1788 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1789 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1790 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1792 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1790 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1791 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1791 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0786933 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1792 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1793 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1795 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1793 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1794 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1794 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0788315 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1795 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1796 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1796 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1797 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1797 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0790472 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1798 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-sym-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1799 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1800 rdf:first "blank" ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1801 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1801 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1802 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1809 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1802 rdf:first ILX:0786933 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1803 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1803 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1804 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1804 rdf:first UBERON:0018683 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1805 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1805 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1806 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1806 rdf:first UBERON:0005303 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1807 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1807 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1808 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1808 rdf:first UBERON:0000002 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1809 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1810 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1813 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1810 rdf:first ILX:0788315 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1811 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1811 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1812 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1812 rdf:first UBERON:0018683 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1813 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1814 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1814 rdf:first ILX:0790472 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1815 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1815 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1816 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1816 rdf:first UBERON:0018683 ;
rdf:rest rdf:nil .
femrep:52 a owl:Class ;
rdfs:label "neuron type femrep 52" ;
skos:prefLabel "intermediolateral nucleus of L6-S1 to major pelvic ganglion via pelvic splanchnic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1841 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1842 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1817 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the parasympathetic pre-ganglionic connection goes from Intermediolateral nucleus of first sacral segment or Intermediolateral nucleus of sixth lumbar segment to major pelvic ganglion via pelvic splanchnic nerve.
This connection projects from the Intermediolateral nucleus of sixth lumbar segment and Intermediolateral nucleus of first sacral segment.""" ;
ilxtr:genLabel "female Intermediolateral nucleus of first sacral segment Intermediolateral nucleus of sixth lumbar segment (with-axon-in pelvic splanchnic nerve) (with-axon-presynaptic-element-in MPG) (projecting-onto neuron type femrep 53 neuron type femrep 54 neuron type femrep 55 neuron type femrep 56) neuron (implies Rattus norvegicus Parasympathetic Pre-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1843 ;
ilxtr:origLabel "neuron type femrep 52" , "from Intermediolateral nucleus of first sacral segment or Intermediolateral nucleus of sixth lumbar segment to major pelvic ganglion via pelvic splanchnic nerve" ;
ilxtr:sentenceNumber "498" ;
ilxtr:hasAxonLocation UBERON:0018675 ;
ilxtr:hasAxonTerminalLocation ILX:0793823 ;
ilxtr:hasForwardConnection femrep:53 , femrep:54 , femrep:55 , femrep:56 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-para-pre ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793877 , ILX:0793878 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1817 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1818 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1818 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1819 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1819 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1820 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1822 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1820 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1821 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1821 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018675 .
UBERON:0018675 a owl:Class ;
rdfs:label "pelvic splanchnic nerve" ;
NIFRID:synonym "pelvic splanchnic nerve" , "nervi erigentes" , "nervi pelvici splanchnici" , "nervi splanchnici pelvici" , "nn erigentes" , "pelvic splanchnic parasympathetic nerve" ;
rdfs:subClassOf UBERON:0003715 , UBERON:0004293 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155391 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155392 ;
ilxtr:hasNextNode UBERON:0005303 , UBERON:0000002 , ILX:0793823 , ILX:0794770 , UBERON:0002014 , UBERON:0016508 , UBERON:0000996 , ILX:0793803 , ILX:0793834 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1822 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1823 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1825 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1823 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1824 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1824 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793823 .
ILX:0793823 a owl:Class ;
rdfs:label "major pelvic ganglion" ;
NIFRID:synonym "MPG" , "pelvic ganglion" ;
rdfs:subClassOf UBERON:0000045 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14434 ;
ilxtr:hasNextNode UBERON:0011929 , UBERON:0011926 , ILX:0793807 , ILX:0793884 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1825 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1826 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1827 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1826 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1827 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1828 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1829 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1828 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:53 .
femrep:53 a owl:Class ;
rdfs:label "neuron type femrep 53" ;
skos:prefLabel "major pelvic ganglion to uterine blood vessels via postganglionic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1867 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1868 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1854 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the parasympathetic post-ganglionic connection goes from major pelvic ganglion to blood vessel of the uterus via postganglionic parasympathetic fiber.
This connection projects from the major pelvic ganglion.""" ;
ilxtr:genLabel "female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in blood vessel of the uterus) neuron (implies Rattus norvegicus Parasympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1869 ;
ilxtr:origLabel "neuron type femrep 53" , "from major pelvic ganglion to blood vessel of the uterus via postganglionic parasympathetic fiber" ;
ilxtr:sentenceNumber "494" ;
ilxtr:hasAxonLocation UBERON:0011929 ;
ilxtr:hasAxonTerminalLocation ILX:0794737 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-para-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793823 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1829 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1830 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1831 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1830 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:54 .
femrep:54 a owl:Class ;
rdfs:label "neuron type femrep 54" ;
skos:prefLabel "major pelvic ganglion to myometrium via postganglionic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1887 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1888 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1874 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the parasympathetic post-ganglionic connection goes from major pelvic ganglion to myometrium via postganglionic parasympathetic fiber.
This connection projects from the major pelvic ganglion.""" ;
ilxtr:genLabel "female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in myometrium) neuron (implies Rattus norvegicus Parasympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1889 ;
ilxtr:origLabel "neuron type femrep 54" , "from major pelvic ganglion to myometrium via postganglionic parasympathetic fiber" ;
ilxtr:sentenceNumber "497" ;
ilxtr:hasAxonLocation UBERON:0011929 ;
ilxtr:hasAxonTerminalLocation UBERON:0001296 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-para-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793823 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1831 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1832 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1833 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1832 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:55 .
femrep:55 a owl:Class ;
rdfs:label "neuron type femrep 55" ;
skos:prefLabel "major pelvic ganglion to the uterine endometrium via postganglionic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1907 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1908 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1894 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the parasympathetic post-ganglionic connection goes from major pelvic ganglion to endometrium via postganglionic parasympathetic fiber.
This connection projects from the major pelvic ganglion.""" ;
ilxtr:genLabel "female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in endometrium) neuron (implies Rattus norvegicus Parasympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1909 ;
ilxtr:origLabel "neuron type femrep 55" , "from major pelvic ganglion to endometrium via postganglionic parasympathetic fiber" ;
ilxtr:sentenceNumber "496" ;
ilxtr:hasAxonLocation UBERON:0011929 ;
ilxtr:hasAxonTerminalLocation UBERON:0001295 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-para-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793823 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1833 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1834 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1835 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1834 a owl:Restriction ;
owl:onProperty ilxtr:hasForwardConnectionPhenotype ;
owl:someValuesFrom femrep:56 .
femrep:56 a owl:Class ;
rdfs:label "neuron type femrep 56" ;
skos:prefLabel "major pelvic ganglion to uterine cervix via postganglionic nerve" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1927 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1928 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1914 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the parasympathetic post-ganglionic connection goes from major pelvic ganglion to uterine cervix via postganglionic parasympathetic fiber.
This connection projects from the major pelvic ganglion.""" ;
ilxtr:genLabel "female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in uterine cervix) neuron (implies Rattus norvegicus Parasympathetic Post-Ganglionic)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1929 ;
ilxtr:origLabel "neuron type femrep 56" , "from major pelvic ganglion to uterine cervix via postganglionic parasympathetic fiber" ;
ilxtr:sentenceNumber "495" ;
ilxtr:hasAxonLocation UBERON:0011929 ;
ilxtr:hasAxonTerminalLocation UBERON:0000002 ;
ilxtr:hasNeuronalPhenotype ilxtr:neuron-phenotype-para-post ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793823 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1835 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1836 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1838 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1836 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1837 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1837 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793877 .
ILX:0793877 a owl:Class ;
rdfs:label "Intermediolateral nucleus of sixth lumbar segment" ;
rdfs:subClassOf UBERON:0001062 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14441 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14442 ;
ilxtr:hasNextNode UBERON:0018675 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1838 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1839 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1839 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1840 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1840 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793878 .
ILX:0793878 a owl:Class ;
rdfs:label "Intermediolateral nucleus of first sacral segment" ;
rdfs:subClassOf UBERON:0001062 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14443 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14444 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14445 ;
ilxtr:hasNextNode UBERON:0018675 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1841 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-para-pre .
ilxtr:neuron-phenotype-para-pre a owl:Class ;
rdfs:label "Parasympathetic Pre-Ganglionic phenotype" ;
skos:hiddenLabel "Parasympathetic Pre-Ganglionic" ;
rdfs:subClassOf ilxtr:ParasympatheticPhenotype , ilxtr:PreGanglionicPhenotype .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1842 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1843 rdf:first "blank" ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1844 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1844 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1845 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1850 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1845 rdf:first ILX:0793877 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1846 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1846 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1847 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1847 rdf:first UBERON:0018675 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1848 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1848 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1849 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1849 rdf:first ILX:0793823 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1850 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1851 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1851 rdf:first ILX:0793878 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1852 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1852 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1853 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1853 rdf:first UBERON:0018675 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1854 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1855 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1855 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1856 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1856 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1857 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1859 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1857 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1858 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1858 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0011929 .
UBERON:0011929 a owl:Class ;
rdfs:label "postganglionic parasympathetic fiber" ;
NIFRID:synonym "parasympathetic postganglionic fiber" ;
rdfs:subClassOf UBERON:0011924 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155232 , _:anon-genid-23dc662664fc4769bf28029f4af71604-155233 ;
ilxtr:hasNextNode UBERON:0000002 , ILX:0794737 , UBERON:0001296 , UBERON:0001295 , UBERON:0000992 , ILX:0794731 , UBERON:0004223 , ILX:0794734 , ILX:0794735 , UBERON:0001344 , ILX:0794738 , ILX:0794736 , ILX:0795342 , UBERON:0001052 , UBERON:0001158 , UBERON:0001159 , UBERON:0001153 , UBERON:0001156 , UBERON:0001157 , UBERON:0002108 , UBERON:0001184 , ILX:0795054 , ILX:0795055 , ILX:0795058 , UBERON:0002113 , UBERON:0001224 , UBERON:0000428 , UBERON:0004805 , UBERON:0004665 , UBERON:0000998 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1859 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1860 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1862 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1860 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1861 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1861 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794737 .
ILX:0794737 a owl:Class ;
rdfs:label "blood vessel of the uterus" ;
rdfs:subClassOf UBERON:0001981 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14473 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1862 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1863 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1864 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1863 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1864 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1865 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1865 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1866 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1866 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793823 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1867 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-para-post .
ilxtr:neuron-phenotype-para-post a owl:Class ;
rdfs:label "Parasympathetic Post-Ganglionic phenotype" ;
skos:hiddenLabel "Parasympathetic Post-Ganglionic" ;
rdfs:subClassOf ilxtr:ParasympatheticPhenotype , ilxtr:PostGanglionicPhenotype .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1868 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1869 rdf:first ILX:0793823 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1870 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1870 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1871 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1871 rdf:first UBERON:0011929 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1872 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1872 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1873 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1873 rdf:first ILX:0794737 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1874 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1875 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1875 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1876 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1876 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1877 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1879 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1877 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1878 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1878 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0011929 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1879 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1880 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1882 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1880 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1881 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1881 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0001296 .
UBERON:0001296 a owl:Class ;
rdfs:label "myometrium" ;
NIFRID:synonym "tunica muscularis" , "tunica muscularis (myometrium)" , "uterine myometrium" , "uterine smooth muscle" ;
rdfs:subClassOf UBERON:0005156 , UBERON:0004923 , UBERON:0034933 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153608 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153609 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153610 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1882 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1883 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1884 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1883 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1884 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1885 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1885 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1886 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1886 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793823 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1887 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-para-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1888 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1889 rdf:first ILX:0793823 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1890 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1890 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1891 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1891 rdf:first UBERON:0011929 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1892 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1892 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1893 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1893 rdf:first UBERON:0001296 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1894 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1895 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1895 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1896 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1896 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1897 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1899 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1897 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1898 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1898 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0011929 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1899 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1900 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1902 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1900 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1901 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1901 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0001295 .
UBERON:0001295 a owl:Class ;
rdfs:label "endometrium" ;
NIFRID:synonym "tunica mucosa (endometrium)" , "tunica mucosa uteri" , "uterine endometrium" , "uterine mucosa" , "uterine mucous membrane" ;
rdfs:subClassOf UBERON:0019042 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153604 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153605 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153606 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153607 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1902 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1903 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1904 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1903 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1904 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1905 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1905 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1906 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1906 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793823 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1907 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-para-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1908 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1909 rdf:first ILX:0793823 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1910 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1910 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1911 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1911 rdf:first UBERON:0011929 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1912 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1912 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1913 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1913 rdf:first UBERON:0001295 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1914 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1915 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1915 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1916 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1916 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1917 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1919 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1917 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1918 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1918 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0011929 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1919 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1920 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1922 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1920 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1921 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1921 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0000002 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1922 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1923 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1924 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1923 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1924 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1925 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1925 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1926 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1926 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793823 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1927 a owl:Restriction ;
owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ;
owl:someValuesFrom ilxtr:neuron-phenotype-para-post .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1928 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1929 rdf:first ILX:0793823 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1930 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1930 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1931 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1931 rdf:first UBERON:0011929 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1932 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1932 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1933 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1933 rdf:first UBERON:0000002 ;
rdf:rest rdf:nil .
femrep:60 a owl:Class ;
rdfs:label "neuron type femrep 60" ;
skos:prefLabel "T13-L4 dorsal root ganglion with axon sensory terminal in upper uterine segment via hypogastric nerve with axon terminal in T13-L4 spinal cord via T13-L4 dorsal roots of spinal cord" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-1989 , _:anon-genid-23dc662664fc4769bf28029f4af71604-1990 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-1934 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female rat, the connection goes from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to L1 segment of lumbar spinal cord or L2 segment of lumbar spinal cord or L3 segment of lumbar spinal cord or L4 segment of lumbar spinal cord or Thirteenth thoracic spinal cord segment via Posterior root of first lumbar nerve, Posterior root of fourth lumbar nerve, Posterior root of second lumbar nerve, Posterior root of third lumbar nerve, Posterior root of thirteenth thoracic nerve; from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to upper uterine segment via hypogastric nerve.
This sensory connection projects from the first lumbar dorsal root ganglion, fourth lumbar dorsal root ganglion, second lumbar dorsal root ganglion, third lumbar dorsal root ganglion and thirteenth thoracic dorsal root ganglion.""" ;
ilxtr:genLabel "female first lumbar dorsal root ganglion fourth lumbar dorsal root ganglion second lumbar dorsal root ganglion third lumbar dorsal root ganglion thirteenth thoracic dorsal root ganglion (with-axons-in Posterior root of first lumbar nerve Posterior root of fourth lumbar nerve Posterior root of second lumbar nerve Posterior root of third lumbar nerve Posterior root of thirteenth thoracic nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord L3 segment of lumbar spinal cord L4 segment of lumbar spinal cord T13 segment of thoracic spinal cord) (implies Rattus norvegicus sensory neuron)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-1991 ;
ilxtr:origLabel "neuron type femrep 60" , "from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to L1 segment of lumbar spinal cord or L2 segment of lumbar spinal cord or L3 segment of lumbar spinal cord or L4 segment of lumbar spinal cord or Thirteenth thoracic spinal cord segment via Posterior root of first lumbar nerve, Posterior root of fourth lumbar nerve, Posterior root of second lumbar nerve, Posterior root of third lumbar nerve, Posterior root of thirteenth thoracic nerve from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to upper uterine segment via hypogastric nerve" ;
ilxtr:reviewNote "updated to include hypogastric nerve as axon leading to sensory terminal\\nUpdated routing to include dorsal root of spinal cord in the path\\nneeds phenotype" ;
ilxtr:sentenceNumber "502" ;
ilxtr:hasAxonLocation ILX:0786747 , ILX:0787227 , ILX:0787779 , ILX:0792058 , ILX:0795492 ;
ilxtr:hasAxonSensoryLocation ILX:0794769 ;
ilxtr:hasAxonTerminalLocation ILX:0793357 , UBERON:0006448 , UBERON:0006449 , UBERON:0006450 , UBERON:0006451 ;
ilxtr:hasAxonToSensoryTerminal UBERON:0005303 ;
ilxtr:hasCircuitRole ilxtr:SensoryPhenotype ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793359 , UBERON:0002856 , UBERON:0002857 , UBERON:0002858 , UBERON:0003943 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1934 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-1935 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1935 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1936 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1936 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1937 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1939 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1937 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLeadingToSensorySubcellularElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1938 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1938 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0005303 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1939 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1940 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1942 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1940 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1941 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1941 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0786747 .
ILX:0786747 a owl:Class ;
rdfs:label "Posterior root of fourth lumbar nerve" ;
rdfs:subClassOf _:anon-genid-23dc662664fc4769bf28029f4af71604-14201 ;
ilxtr:hasNextNode ILX:0793357 , UBERON:0006448 , UBERON:0006449 , UBERON:0006450 , UBERON:0006451 , UBERON:0006460 , UBERON:0006461 , UBERON:0006462 , UBERON:0006447 , UBERON:0001322 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1942 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1943 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1945 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1943 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1944 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1944 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0787227 .
ILX:0787227 a owl:Class ;
rdfs:label "Posterior root of third lumbar nerve" ;
rdfs:subClassOf _:anon-genid-23dc662664fc4769bf28029f4af71604-14210 ;
ilxtr:hasNextNode ILX:0793357 , UBERON:0006448 , UBERON:0006449 , UBERON:0006450 , UBERON:0006451 , ILX:0795029 , ILX:0795030 , ILX:0795031 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1945 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1946 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1948 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1946 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1947 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1947 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0787779 .
ILX:0787779 a owl:Class ;
rdfs:label "Posterior root of first lumbar nerve" ;
rdfs:subClassOf _:anon-genid-23dc662664fc4769bf28029f4af71604-14217 ;
ilxtr:hasNextNode UBERON:0006466 , ILX:0793357 , UBERON:0006448 , UBERON:0006449 , UBERON:0006450 , UBERON:0006451 , UBERON:0006467 , UBERON:0006468 , ILX:0795026 , ILX:0795027 , ILX:0795028 , ILX:0795029 , ILX:0795030 , ILX:0795031 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1948 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1949 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1951 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1949 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1950 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1950 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0792058 .
ILX:0792058 a owl:Class ;
rdfs:label "Posterior root of second lumbar nerve" ;
rdfs:subClassOf _:anon-genid-23dc662664fc4769bf28029f4af71604-14275 ;
ilxtr:hasNextNode UBERON:0006466 , ILX:0793357 , UBERON:0006448 , UBERON:0006449 , UBERON:0006450 , UBERON:0006451 , UBERON:0006467 , UBERON:0006468 , ILX:0795026 , ILX:0795027 , ILX:0795028 , ILX:0795029 , ILX:0795030 , ILX:0795031 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1951 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1952 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1954 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1952 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1953 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1953 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0795492 .
ILX:0795492 a owl:Class ;
rdfs:label "Posterior root of thirteenth thoracic nerve" ;
rdfs:subClassOf FMA:12908 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14598 ;
ilxtr:hasNextNode ILX:0793357 , UBERON:0006448 , UBERON:0006449 , UBERON:0006450 , UBERON:0006451 , ILX:0795023 , ILX:0795024 , ILX:0795025 , ILX:0795026 , ILX:0795027 , ILX:0795028 , ILX:0795494 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1954 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1955 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1957 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1955 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1956 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1956 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793357 .
ILX:0793357 a owl:Class ;
rdfs:label "T13 segment of thoracic spinal cord" ;
NIFRID:synonym "T13 segment" , "T13 spinal cord segment" ;
rdfs:subClassOf UBERON:0007715 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14311 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018683 , UBERON:0002013 , ILX:0793218 , ILX:0793219 , ILX:0793220 , ILX:0793221 , ILX:0793361 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1957 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1958 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1960 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1958 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1959 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1959 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006448 .
UBERON:0006448 a owl:Class ;
rdfs:label "L1 segment of lumbar spinal cord" ;
NIFRID:synonym "first lumbar spinal cord segment" , "L1 segment" , "L1 spinal cord segment" ;
rdfs:subClassOf UBERON:0007716 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154886 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018681 , UBERON:0018683 , UBERON:0002013 , UBERON:0002010 , ILX:0746880 , ILX:0785076 , ILX:0785242 , ILX:0787564 , ILX:0787969 , ILX:0788972 , ILX:0790443 , ILX:0791390 , ILX:0791808 , ILX:0792132 , ILX:0792543 , ILX:0793218 , ILX:0793219 , ILX:0793220 , ILX:0793221 , ILX:0793361 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1960 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1961 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1963 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1961 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1962 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1962 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006449 .
UBERON:0006449 a owl:Class ;
rdfs:label "L3 segment of lumbar spinal cord" ;
NIFRID:synonym "L3 segment" , "L3 spinal cord segment" , "third lumbar spinal cord segment" ;
rdfs:subClassOf UBERON:0007716 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154887 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018683 , ILX:0746880 , ILX:0785242 , ILX:0787564 , ILX:0788972 , ILX:0790443 , ILX:0793218 , ILX:0793219 , ILX:0793220 , ILX:0793221 , ILX:0793361 , UBERON:0001267 , UBERON:0005465 , UBERON:0001323 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1963 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1964 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1966 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1964 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1965 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1965 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006450 .
UBERON:0006450 a owl:Class ;
rdfs:label "L2 segment of lumbar spinal cord" ;
NIFRID:synonym "l2 segment" , "L2 spinal cord segment" , "second lumbar spinal cord segment" ;
rdfs:subClassOf UBERON:0007716 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154888 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018681 , UBERON:0018683 , UBERON:0002013 , UBERON:0002010 , ILX:0746880 , ILX:0785242 , ILX:0787564 , ILX:0788972 , ILX:0790443 , ILX:0793218 , ILX:0793219 , ILX:0793220 , ILX:0793221 , ILX:0793361 , UBERON:0001267 , UBERON:0005465 , UBERON:0001323 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1966 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1967 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1969 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1967 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1968 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1968 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006451 .
UBERON:0006451 a owl:Class ;
rdfs:label "L4 segment of lumbar spinal cord" ;
NIFRID:synonym "fourth lumbar spinal cord segment" , "L4 segment" , "L4 spinal cord segment" ;
rdfs:subClassOf UBERON:0007716 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154889 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018683 , ILX:0746880 , ILX:0785242 , ILX:0787564 , ILX:0788972 , ILX:0790443 , ILX:0793218 , ILX:0793219 , ILX:0793220 , ILX:0793221 , ILX:0793361 , ILX:0794990 , UBERON:0001267 , UBERON:0005465 , UBERON:0001323 , UBERON:0035207 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1969 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1970 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1972 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1970 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1971 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1971 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794769 .
ILX:0794769 a owl:Class ;
rdfs:label "upper uterine segment" ;
rdfs:subClassOf UBERON:0005156 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14480 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14481 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1972 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1973 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1974 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1973 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1974 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1975 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1977 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1975 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1976 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1976 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793359 .
ILX:0793359 a owl:Class ;
rdfs:label "thirteenth thoracic dorsal root ganglion" ;
NIFRID:synonym "T13 dorsal root ganglia" , "thirteenth thoracic spinal ganglion" ;
rdfs:subClassOf UBERON:0002835 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14312 ;
ilxtr:hasNextNode UBERON:0018679 , UBERON:0005303 , ILX:0786747 , ILX:0787227 , ILX:0787779 , ILX:0792058 , ILX:0795492 , ILX:0787665 , ILX:0789892 , ILX:0790338 , ILX:0784605 , ILX:0789741 , ILX:0792624 , ILX:0793632 , ILX:0793357,http://purl.obolibrary.org/obo/UBERON_0002318 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1977 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1978 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1980 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1978 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1979 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1979 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002856 .
UBERON:0002856 a owl:Class ;
rdfs:label "second lumbar dorsal root ganglion" ;
NIFRID:synonym "second lumbar dorsal root ganglion" , "second lumbar spinal ganglion" ;
rdfs:subClassOf UBERON:0002836 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154394 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018681 , UBERON:0018683 , UBERON:0005303 , ILX:0786747 , ILX:0787227 , ILX:0787779 , ILX:0792058 , ILX:0795492 , ILX:0787665 , ILX:0789892 , ILX:0790338 , ILX:0793632 , ILX:0794997 , ILX:0794998 , ILX:0794999 , UBERON:0001267 , UBERON:0005465 , UBERON:0006450,http://purl.obolibrary.org/obo/UBERON_0002318 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1980 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1981 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1983 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1981 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1982 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1982 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002857 .
UBERON:0002857 a owl:Class ;
rdfs:label "first lumbar dorsal root ganglion" ;
NIFRID:synonym "first lumbar dorsal root ganglion" , "first lumbar spinal ganglion" ;
rdfs:subClassOf UBERON:0002836 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154395 ;
ilxtr:hasNextNode UBERON:0001964 , UBERON:0018681 , UBERON:0018683 , UBERON:0005303 , ILX:0786747 , ILX:0787227 , ILX:0787779 , ILX:0792058 , ILX:0795492 , ILX:0787665 , ILX:0789892 , ILX:0790338 , ILX:0793632 , ILX:0794996 , ILX:0794997 , ILX:0794998 , ILX:0795002 , UBERON:0006448,http://purl.obolibrary.org/obo/UBERON_0002318 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1983 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1984 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1986 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1984 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1985 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1985 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002858 .
UBERON:0002858 a owl:Class ;
rdfs:label "third lumbar dorsal root ganglion" ;
NIFRID:synonym "third lumbar dorsal root ganglion" , "third lumbar spinal ganglion" ;
rdfs:subClassOf UBERON:0002836 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154396 ;
ilxtr:hasNextNode UBERON:0018683 , UBERON:0005303 , ILX:0786747 , ILX:0787227 , ILX:0787779 , ILX:0792058 , ILX:0795492 , ILX:0793632 , ILX:0794999 , UBERON:0001267 , UBERON:0005465 , UBERON:0006449,http://purl.obolibrary.org/obo/UBERON_0002318 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1986 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1987 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1987 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-1988 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1988 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0003943 .
UBERON:0003943 a owl:Class ;
rdfs:label "fourth lumbar dorsal root ganglion" ;
NIFRID:synonym "fourth lumbar dorsal root ganglion" , "forth lumbar dorsal root ganglion" , "fourth lumbar spinal ganglion" , "L4 dorsal root ganglion" , "L4 ganglion" ;
rdfs:subClassOf UBERON:0002836 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154584 ;
ilxtr:hasNextNode UBERON:0005303 , ILX:0786747 , ILX:0787227 , ILX:0787779 , ILX:0792058 , ILX:0795492 , ILX:0788723 , ILX:0791633 , ILX:0786145 , ILX:0785201 , ILX:0793632 , UBERON:0001492 , UBERON:0001267 , UBERON:0005465 , UBERON:0006451,http://purl.obolibrary.org/obo/UBERON_0002318 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1989 a owl:Restriction ;
owl:onProperty ilxtr:hasCircuitRolePhenotype ;
owl:someValuesFrom ilxtr:SensoryPhenotype .
ilxtr:SensoryPhenotype a owl:Class ;
rdfs:label "Sensory phenotype" ;
rdfs:comment "the implementation of the sensor in a sensory neuron is essentially arbitrary with respect to subcompartment and projection pattern" ;
skos:hiddenLabel "Sensory" ;
rdfs:subClassOf ilxtr:Phenotype .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1990 a owl:Restriction ;
owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1992 .
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_:anon-genid-23dc662664fc4769bf28029f4af71604-1993 rdf:first ILX:0793359 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1994 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1994 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-1995 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1996 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1995 rdf:first ILX:0786747 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-1998 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-1997 rdf:first ILX:0787227 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11000 .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11002 .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11002 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11003 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11004 .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11004 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11005 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11005 rdf:first UBERON:0005303 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11006 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11007 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11072 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11008 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11012 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11011 rdf:first ILX:0793357 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11014 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11013 rdf:first UBERON:0006448 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11016 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11015 rdf:first UBERON:0006449 ;
rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11018 .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11082 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11081 rdf:first ILX:0792058 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11082 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11083 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11084 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11083 rdf:first ILX:0795492 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11084 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11085 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11085 rdf:first UBERON:0005303 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11086 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11087 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11100 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11087 rdf:first UBERON:0002858 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11088 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11088 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11089 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11090 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11089 rdf:first ILX:0786747 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11090 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11091 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11092 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11091 rdf:first ILX:0787227 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11092 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11093 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11094 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11093 rdf:first ILX:0787779 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11094 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11095 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11096 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11095 rdf:first ILX:0792058 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11096 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11097 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11098 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11097 rdf:first ILX:0795492 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11098 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11099 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11099 rdf:first UBERON:0005303 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11100 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11101 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11101 rdf:first UBERON:0003943 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11102 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11102 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11103 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11104 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11103 rdf:first ILX:0786747 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11104 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11105 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11106 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11105 rdf:first ILX:0787227 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11106 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11107 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11108 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11107 rdf:first ILX:0787779 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11108 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11109 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11110 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11109 rdf:first ILX:0792058 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11110 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11111 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11112 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11111 rdf:first ILX:0795492 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11112 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11113 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11113 rdf:first UBERON:0005303 ;
rdf:rest rdf:nil .
femrep:61 a owl:Class ;
rdfs:label "neuron type femrep 61" ;
skos:prefLabel "T13-L4 dorsal root ganglion with axon sensory terminal in ovary via hypogastric nerve with axon terminal in T13-L4 spinal cord via T13-L4 dorsal roots of spinal cord" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-11169 , _:anon-genid-23dc662664fc4769bf28029f4af71604-11170 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-11114 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female rat, the connection goes from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to L1 segment of lumbar spinal cord or L2 segment of lumbar spinal cord or L3 segment of lumbar spinal cord or L4 segment of lumbar spinal cord or Thirteenth thoracic spinal cord segment via Posterior root of first lumbar nerve, Posterior root of fourth lumbar nerve, Posterior root of second lumbar nerve, Posterior root of third lumbar nerve, Posterior root of thirteenth thoracic nerve; from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to ovary via hypogastric nerve.
This sensory connection projects from the first lumbar dorsal root ganglion, fourth lumbar dorsal root ganglion, second lumbar dorsal root ganglion, third lumbar dorsal root ganglion and thirteenth thoracic dorsal root ganglion.""" ;
ilxtr:genLabel "female first lumbar dorsal root ganglion fourth lumbar dorsal root ganglion second lumbar dorsal root ganglion third lumbar dorsal root ganglion thirteenth thoracic dorsal root ganglion (with-axons-in Posterior root of first lumbar nerve Posterior root of fourth lumbar nerve Posterior root of second lumbar nerve Posterior root of third lumbar nerve Posterior root of thirteenth thoracic nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord L3 segment of lumbar spinal cord L4 segment of lumbar spinal cord T13 segment of thoracic spinal cord) (implies Rattus norvegicus sensory neuron)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-11171 ;
ilxtr:origLabel "neuron type femrep 61" , "from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to L1 segment of lumbar spinal cord or L2 segment of lumbar spinal cord or L3 segment of lumbar spinal cord or L4 segment of lumbar spinal cord or Thirteenth thoracic spinal cord segment via Posterior root of first lumbar nerve, Posterior root of fourth lumbar nerve, Posterior root of second lumbar nerve, Posterior root of third lumbar nerve, Posterior root of thirteenth thoracic nerve from first lumbar dorsal root ganglion or fourth lumbar dorsal root ganglion or second lumbar dorsal root ganglion or third lumbar dorsal root ganglion or thirteenth thoracic dorsal root ganglion to ovary via hypogastric nerve" ;
ilxtr:reviewNote "updated to include hypogastric nerve as axon leading to sensory terminal.\\nadjusted vias to correct partial order issue." ;
ilxtr:sentenceNumber "503" ;
ilxtr:hasAxonLocation ILX:0786747 , ILX:0787227 , ILX:0787779 , ILX:0792058 , ILX:0795492 ;
ilxtr:hasAxonSensoryLocation UBERON:0000992 ;
ilxtr:hasAxonTerminalLocation ILX:0793357 , UBERON:0006448 , UBERON:0006449 , UBERON:0006450 , UBERON:0006451 ;
ilxtr:hasAxonToSensoryTerminal UBERON:0005303 ;
ilxtr:hasCircuitRole ilxtr:SensoryPhenotype ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793359 , UBERON:0002856 , UBERON:0002857 , UBERON:0002858 , UBERON:0003943 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11114 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-11115 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11115 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11116 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11117 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11119 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11117 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLeadingToSensorySubcellularElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11118 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11118 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0005303 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11119 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11120 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11122 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11120 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11121 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11121 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0786747 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11122 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11123 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11125 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11123 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11124 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11124 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0787227 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11125 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11126 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11128 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11126 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11127 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11127 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0787779 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11128 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11129 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11131 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11129 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11130 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11130 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0792058 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11131 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11132 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11134 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11132 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11133 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11133 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0795492 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11134 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11135 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11137 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11135 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11136 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11136 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793357 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11137 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11138 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11140 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11138 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11139 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11139 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006448 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11140 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11141 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11143 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11141 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11142 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11142 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006449 .
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owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11145 a owl:Restriction ;
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owl:someValuesFrom UBERON:0006450 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11149 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11147 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11148 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11148 a owl:Restriction ;
owl:onProperty partOf: ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11149 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11150 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11152 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11150 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11151 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11151 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0000992 .
UBERON:0000992 a owl:Class ;
rdfs:label "ovary" ;
NIFRID:synonym "animal ovary" , "female gonad" , "female organism genitalia gonad" , "female organism genitalia gonada" , "female organism reproductive system gonad" , "female organism reproductive system gonada" , "female reproductive system gonad" , "female reproductive system gonada" , "genitalia of female organism gonad" , "genitalia of female organism gonada" , "gonad of female organism genitalia" , "gonad of female organism reproductive system" , "gonad of female reproductive system" , "gonad of genitalia of female organism" , "gonad of reproductive system of female organism" , "gonada of female organism genitalia" , "gonada of female organism reproductive system" , "gonada of female reproductive system" , "gonada of genitalia of female organism" , "gonada of reproductive system of female organism" , "ovaries" , "ovarium" , "ovum-producing ovary" , "reproductive system of female organism gonad" , "reproductive system of female organism gonada" ;
rdfs:subClassOf UBERON:0000991 , UBERON:0003134 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153428 , _:anon-genid-23dc662664fc4769bf28029f4af71604-153429 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11154 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11153 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11154 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11155 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11157 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11155 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11156 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11156 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793359 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11157 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11158 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11160 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11158 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11159 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11160 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11161 ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11161 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11162 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11163 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11164 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11166 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11164 a owl:Restriction ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11165 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002858 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11166 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11167 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11167 a owl:Restriction ;
owl:onProperty ilxtr:hasSomaLocatedIn ;
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11168 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0003943 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11169 a owl:Restriction ;
owl:onProperty ilxtr:hasCircuitRolePhenotype ;
owl:someValuesFrom ilxtr:SensoryPhenotype .
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_:anon-genid-23dc662664fc4769bf28029f4af71604-11286 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11287 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11288 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11287 rdf:first ILX:0787779 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11288 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11289 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11290 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11289 rdf:first ILX:0792058 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11290 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11291 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11292 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11291 rdf:first ILX:0795492 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11292 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11293 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11293 rdf:first UBERON:0005303 ;
rdf:rest rdf:nil .
femrep:62 a owl:Class ;
rdfs:label "neuron type femrep 62" ;
skos:prefLabel "L6-S2 dorsal root ganglion with axon sensory terminal in lower uterine segment via pelvic nerve with axon terminal in L6-S2 spinal cord via L6-S2 dorsal roots of spinal cord" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-11331 , _:anon-genid-23dc662664fc4769bf28029f4af71604-11332 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-11294 ;
ilxcr:hasComposerURI ;
ilxtr:alertNote "sjfjkanvnisoojsll https://sparc.science" ;
ilxtr:composerGenLabel """In female Norway rat, rat and rattus norvegicus, the connection goes from first sacral dorsal root ganglion or second sacral dorsal root ganglion or sixth lumbar dorsal root ganglion to L6 segment of lumbar spinal cord or S1 segment of sacral spinal cord or S2 segment of sacral spinal cord via Posterior root of first sacral nerve, Posterior root of second sacral nerve, Posterior root of sixth lumbar nerve; from first sacral dorsal root ganglion or second sacral dorsal root ganglion or sixth lumbar dorsal root ganglion to lower uterine segment via pelvic splanchnic nerve.
This sensory connection projects from the first sacral dorsal root ganglion, second sacral dorsal root ganglion and sixth lumbar dorsal root ganglion.""" ;
ilxtr:genLabel "female first sacral dorsal root ganglion second sacral dorsal root ganglion sixth lumbar dorsal root ganglion (with-axons-in Posterior root of first sacral nerve Posterior root of second sacral nerve Posterior root of sixth lumbar nerve) (with-axon-presynaptic-element-in L6 S1 segment of sacral spinal cord S2 segment of sacral spinal cord) (implies Rattus norvegicus sensory neuron)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , , , , ;
ilxtr:neuronPartialOrder _:anon-genid-23dc662664fc4769bf28029f4af71604-11333 ;
ilxtr:origLabel "neuron type femrep 62" , "from first sacral dorsal root ganglion or second sacral dorsal root ganglion or sixth lumbar dorsal root ganglion to L6 segment of lumbar spinal cord or S1 segment of sacral spinal cord or S2 segment of sacral spinal cord via Posterior root of first sacral nerve, Posterior root of second sacral nerve, Posterior root of sixth lumbar nerve from first sacral dorsal root ganglion or second sacral dorsal root ganglion or sixth lumbar dorsal root ganglion to lower uterine segment via pelvic splanchnic nerve" ;
ilxtr:reviewNote "updated to include pelvic splanchnic nerve as axon leading to sensory terminal based on the uberon identity. A2BvC just lists pelvic nerve, should it be updated?\\n@Sue yes it would be very helpful to use \"axon leading to sensory terminal\" for pelvic splanchnic nerve but I don't see it in the dropdown menu.\\nWe also now have axon leading to sensory target as an option in Composer, is it helpful to use it?\\nI believe that for the purposes of visualization, we always route segments through their respective DRGs. I think that all DRG connections should probably have the same note about this convention because it is likely not true.\\nUpdated the population diagram to list the segments in anatomical order. Ilias, let's get a decision on this routing through the dorsal root generic vs individual segment dorsal root? if we can create a consistent rule, that would be great.\\nFemRep62\\nRegarding whether we should be using the generic term \"dorsal root of spinal cord\" or the specific level this is a complicated issue. I would prefer to use the generic term because stating the dorsal roots (i.e. L2-L6) based on the DRGs (L2-L6) they found labeled cells is a logical assumption. Perhaps the routing of the axons to the dorsal horn is more complicated. But for modelling reasons I think using the segments individually will make the maps look better. Perhaps we can discuss this tomorrow in Kcore meeting.\\n@illias - It would be good to know what is needed with respect to the \"general\" term dorsal root of spinal cord, instead of the individual anatomies per segment that we have done elsewhere please.\\nWhat do we do with the dorsal root of spinal cord via?\\nWhat do we do with the \"dorsal root of spinal cord\" via?" ;
ilxtr:sentenceNumber "504" ;
ilxtr:hasAxonLocation ILX:0788723 , ILX:0791633 , ILX:0795491 ;
ilxtr:hasAxonSensoryLocation ILX:0794770 ;
ilxtr:hasAxonTerminalLocation ILX:0738432 , UBERON:0006460 , UBERON:0006461 ;
ilxtr:hasAxonToSensoryTerminal UBERON:0018675 ;
ilxtr:hasCircuitRole ilxtr:SensoryPhenotype ;
ilxtr:hasPhenotypicSex PATO:0000383 ;
ilxtr:hasSomaLocation ILX:0793360 , UBERON:0002860 , UBERON:0002861 ;
ilxtr:isObservedInSpecies NCBITaxon:10116 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11294 a owl:Class ;
owl:intersectionOf _:anon-genid-23dc662664fc4769bf28029f4af71604-11295 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11295 rdf:first ilxtr:NeuronSparcNlp ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11296 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11296 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11297 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11299 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11297 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLeadingToSensorySubcellularElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11298 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11298 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0018675 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11299 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11300 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11302 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11300 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11301 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11301 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0788723 .
ILX:0788723 a owl:Class ;
rdfs:label "Posterior root of second sacral nerve" ;
rdfs:subClassOf _:anon-genid-23dc662664fc4769bf28029f4af71604-14231 ;
ilxtr:hasNextNode UBERON:0006451 , ILX:0738432 , UBERON:0006460 , UBERON:0006461 , UBERON:0006462 , UBERON:0006463 , UBERON:0006447 , UBERON:0001322 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11302 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11303 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11305 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11303 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11304 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11304 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0791633 .
ILX:0791633 a owl:Class ;
rdfs:label "Posterior root of first sacral nerve" ;
rdfs:subClassOf _:anon-genid-23dc662664fc4769bf28029f4af71604-14271 ;
ilxtr:hasNextNode UBERON:0006451 , ILX:0738432 , UBERON:0006460 , UBERON:0006461 , UBERON:0006462 , UBERON:0006447 , UBERON:0001322 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11305 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11306 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11308 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11306 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11307 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11307 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0795491 .
ILX:0795491 a owl:Class ;
rdfs:label "Posterior root of sixth lumbar nerve" ;
rdfs:subClassOf FMA:12969 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14597 ;
ilxtr:hasNextNode ILX:0738432 , UBERON:0006460 , UBERON:0006461 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11308 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11309 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11311 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11309 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11310 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11310 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0738432 .
ILX:0738432 a owl:Class ;
rdfs:label "L6 segment of lumbar spinal cord" ;
NIFRID:synonym "L6" , "sixth lumbar spinal cord segment" ;
rdfs:subClassOf UBERON:0007716 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14129 ;
ilxtr:hasNextNode UBERON:0018675 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11311 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11312 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11314 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11312 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11313 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11313 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006460 .
UBERON:0006460 a owl:Class ;
rdfs:label "S1 segment of sacral spinal cord" ;
NIFRID:synonym "first sacral spinal cord segment" , "S1 segment" , "S1 spinal cord segment" ;
rdfs:subClassOf UBERON:0007717 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154898 ;
ilxtr:hasNextNode UBERON:0018675 , ILX:0787528 , ILX:0790504 , ILX:0794988 , ILX:0794991 , UBERON:0034984 , UBERON:0001323 , UBERON:0001322 , UBERON:0035526 , UBERON:0035207 , UBERON:0035111 , UBERON:0035110 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11314 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11315 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11317 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11315 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonPresynapticElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11316 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11316 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0006461 .
UBERON:0006461 a owl:Class ;
rdfs:label "S2 segment of sacral spinal cord" ;
NIFRID:synonym "S2 segment" , "S2 spinal cord segment" , "second sacral spinal cord segment" ;
rdfs:subClassOf UBERON:0007717 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154899 ;
ilxtr:hasNextNode UBERON:0018675 , ILX:0788777 , UBERON:0011390 , ILX:0773631 , ILX:0787528 , ILX:0790504 , ILX:0792327 , UBERON:0011391 , UBERON:0001323 , UBERON:0035207 , UBERON:0035111 , UBERON:0035110 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11320 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11318 a owl:Restriction ;
owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11319 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11319 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0794770 .
ILX:0794770 a owl:Class ;
rdfs:label "lower uterine segment" ;
rdfs:subClassOf UBERON:0005156 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14482 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14483 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11320 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11321 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11322 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11321 a owl:Restriction ;
owl:onProperty ilxtr:hasBiologicalSex ;
owl:someValuesFrom PATO:0000383 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11322 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11323 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11325 .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11324 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11324 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom ILX:0793360 .
ILX:0793360 a owl:Class ;
rdfs:label "sixth lumbar dorsal root ganglion" ;
NIFRID:synonym "L6 dorsal root ganglia" , "L6 dorsal root ganglion" , "Sixth lumbar spinal ganglion" ;
rdfs:subClassOf UBERON:0002836 , _:anon-genid-23dc662664fc4769bf28029f4af71604-14313 ;
ilxtr:hasNextNode UBERON:0018675 , ILX:0788723 , ILX:0791633 , ILX:0795491 , UBERON:0011390 , ILX:0738432,http://purl.obolibrary.org/obo/UBERON_0002318 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11325 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11326 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11328 .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11327 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11327 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002860 .
UBERON:0002860 a owl:Class ;
rdfs:label "first sacral dorsal root ganglion" ;
NIFRID:synonym "first sacral dorsal root ganglion" , "first sacral spinal ganglion" ;
rdfs:subClassOf UBERON:0002837 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154398 ;
ilxtr:hasNextNode UBERON:0018675 , ILX:0786747 , ILX:0788723 , ILX:0791633 , ILX:0795491 , ILX:0786145 , UBERON:0011390 , ILX:0785201 , UBERON:0001492 , ILX:0795000 , UBERON:0006460,http://purl.obolibrary.org/obo/UBERON_0002318 .
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rdf:rest rdf:nil .
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owl:onProperty ilxtr:hasSomaLocatedIn ;
owl:someValuesFrom _:anon-genid-23dc662664fc4769bf28029f4af71604-11330 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11330 a owl:Restriction ;
owl:onProperty partOf: ;
owl:someValuesFrom UBERON:0002861 .
UBERON:0002861 a owl:Class ;
rdfs:label "second sacral dorsal root ganglion" ;
NIFRID:synonym "second sacral dorsal root ganglion" , "second sacral spinal ganglion" ;
rdfs:subClassOf UBERON:0002837 , _:anon-genid-23dc662664fc4769bf28029f4af71604-154399 ;
ilxtr:hasNextNode UBERON:0018675 , ILX:0786747 , ILX:0788723 , ILX:0791633 , ILX:0795491 , ILX:0785338 , ILX:0786145 , UBERON:0011390 , ILX:0785201 , UBERON:0001492 , ILX:0795000 , ILX:0795001 .
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owl:onProperty ilxtr:hasCircuitRolePhenotype ;
owl:someValuesFrom ilxtr:SensoryPhenotype .
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owl:onProperty ilxtr:hasInstanceInTaxon ;
owl:someValuesFrom NCBITaxon:10116 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11338 .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11342 .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11358 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11357 rdf:first ILX:0738432 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11358 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11359 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11360 .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11370 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11364 .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11366 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11365 rdf:first ILX:0738432 ;
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11368 .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11372 .
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rdf:rest rdf:nil .
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rdf:rest rdf:nil .
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rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11380 .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11379 rdf:first ILX:0791633 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11380 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11381 ;
rdf:rest _:anon-genid-23dc662664fc4769bf28029f4af71604-11382 .
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rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11382 rdf:first _:anon-genid-23dc662664fc4769bf28029f4af71604-11383 ;
rdf:rest rdf:nil .
_:anon-genid-23dc662664fc4769bf28029f4af71604-11383 rdf:first UBERON:0018675 ;
rdf:rest rdf:nil .
femrep:63 a owl:Class ;
rdfs:label "neuron type femrep 63" ;
skos:prefLabel "L6-S2 dorsal root ganglion with axon sensory terminal in uterine cervix via pelvic nerve with axon terminal in L6-S2 spinal cord via L6-S2 dorsal roots of spinal cord" ;
rdfs:subClassOf ilxtr:NeuronSparcNlp , _:anon-genid-23dc662664fc4769bf28029f4af71604-11421 , _:anon-genid-23dc662664fc4769bf28029f4af71604-11422 ;
owl:equivalentClass _:anon-genid-23dc662664fc4769bf28029f4af71604-11384 ;
ilxcr:hasComposerURI ;
ilxtr:composerGenLabel """In female rat, the connection goes from first sacral dorsal root ganglion or second sacral dorsal root ganglion or sixth lumbar dorsal root ganglion to L6 segment of lumbar spinal cord or S1 segment of sacral spinal cord or S2 segment of sacral spinal cord via Posterior root of first sacral nerve, Posterior root of second sacral nerve, Posterior root of sixth lumbar nerve; from first sacral dorsal root ganglion or second sacral dorsal root ganglion or sixth lumbar dorsal root ganglion to uterine cervix via pelvic splanchnic nerve.
This sensory connection projects from the first sacral dorsal root ganglion, second sacral dorsal root ganglion and sixth lumbar dorsal root ganglion.""" ;
ilxtr:genLabel "female first sacral dorsal root ganglion second sacral dorsal root ganglion sixth lumbar dorsal root ganglion (with-axons-in Posterior root of first sacral nerve Posterior root of second sacral nerve Posterior root of sixth lumbar nerve) (with-axon-presynaptic-element-in L6 S1 segment of sacral spinal cord S2 segment of sacral spinal cord) (implies Rattus norvegicus sensory neuron)" ;
ilxtr:inNLPWorkingSet "composer round trip" ;
ilxtr:literatureCitation , ,