# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other # Spack Project Developers. See the top-level COPYRIGHT file for details. # # SPDX-License-Identifier: (Apache-2.0 OR MIT) import sys from spack.package import * class AutodockVina(MakefilePackage): """AutoDock Vina is an open-source program for doing molecular docking""" homepage = "http://vina.scripps.edu/" url = "https://github.com/ccsb-scripps/AutoDock-Vina/archive/refs/tags/v1.2.3.tar.gz" license("Apache-2.0") version("1.2.3", sha256="22f85b2e770b6acc363429153b9551f56e0a0d88d25f747a40d2f55a263608e0") version("1.2.2", sha256="b9c28df478f90d64dbbb5f4a53972bddffffb017b7bb58581a1a0034fff1b400") version("1.2.1", sha256="2d8d9871a5a95265c03c621c0584d9f06b202303116e6c87e23c935f7b694f74") version("1.2.0", sha256="9c9a85766b4d124d7c1d92e767aa8b4580c6175836b8aa2c28f88a9c40a5b90e") version( "1.1.2", sha256="65422b2240c75d40417872a48e98043e7a7c435300dc8490af0c1f752f1ca4a2", url="https://github.com/ccsb-scripps/AutoDock-Vina/archive/refs/tags/v1.1.2-boost-new.tar.gz", ) depends_on( "boost@1.50.0:1.75.0 +filesystem +program_options +serialization +system +thread", when="@1.1.2", ) depends_on( "boost@1.54.0: +filesystem +program_options +serialization +system +thread", when="@1.2.0:" ) @property def build_directory(self): if sys.platform == "darwin": return join_path("build", "mac", "release") else: return join_path("build", "linux", "release") def edit(self, spec, prefix): with working_dir(self.build_directory): makefile = FileFilter("Makefile") makefile.filter( "BOOST_INCLUDE = .*", f"BOOST_INCLUDE = {self.spec['boost'].prefix.include}" ) makefile.filter("C_PLATFORM=.*", "C_PLATFORM=-pthread") makefile.filter("GPP=.*", f"GPP={spack_cxx}") def build(self, spec, prefix): with working_dir(self.build_directory): make() def install(self, spec, prefix): with working_dir(self.build_directory): mkdirp(prefix.bin) install("vina", prefix.bin) install("vina_split", prefix.bin)