Bootstrap:library
From: debian:9

%environment

	#Setting the environment variables needed
	CAFFE_ROOT=/caffe
	PREFIX=/usr/local/bootstrap
	BOOTSTRAP=/usr/local/bootstrap/bin
	export CAFFEROOT PREFIX BOOTSTRAP

%help

	Singularity container with Caffe Deep learning framework (with CPU support only) installation v1.0.0 for Debian 9 Stretch. This installation uses Python 2.7.15.

%post

	#Installing all dependencies
	apt update
	apt-get -y install wget \
	git \
	cmake

	#Installing Caffe for CPU support
	apt install -y caffe-cpu caffe-doc
	caffe
	python3 -c 'import caffe; print(caffe.__path__)'
	dpkg -L caffe-doc

	#First modify the /etc/apt/sources.list
	echo "deb http://ftp2.cn.debian.org/debian sid main contrib non-free" >> /etc/apt/sources.list
	echo "deb-src http://ftp2.cn.debian.org/debian sid main contrib non-free" >> /etc/apt/sources.list

	#Building caffe deb files
	apt update
	apt install -y build-essential debhelper devscripts libhdf5-dev libatlas-base-dev libopencv-dev python-numpy
	apt build-dep -y caffe-cpu

	#Obtaining the source code from GitLab (supported for debian)
	git clone https://salsa.debian.org/science-team/caffe.git
	cd caffe
	cp Makefile.config.example Makefile.config

	#Specifying it is only for CPU support
	echo "CPU_ONLY := 1" >> ./Makefile.config

	#Configuring the makefile before building
	sed -i 's/LIBRARY_DIRS := \$(PYTHON_LIB) \/usr\/local\/lib \/usr\/lib/& \/usr\/lib\/x86_64-linux-gnu\/hdf5\/serial/' ./Makefile.config
	sed -i 's/INCLUDE_DIRS := \$(PYTHON_INCLUDE) \/usr\/local\/include/& \/usr\/include\/hdf5\/serial\//' ./Makefile.config

	#Building caffe and running tests
	mkdir build
	cd build
	cmake ..
	make all
	make install
	make runtest

%runscript

	caffe --version