chr1	Cufflinks	transcript	894755	896612	1000	.	.	expr "0.0967430354"; transcript_id "49.T21"; ref "0"; sample_id "49";
chr1	Cufflinks	transcript	894755	899245	1000	-	.	expr "0.0603817385"; transcript_id "49.T23"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	894755	896091	1000	-	.	transcript_id "49.T23";
chr1	Cufflinks	exon	894755	896612	1000	.	.	transcript_id "49.T21";
chr1	Cufflinks	transcript	894770	899167	1000	-	.	expr "0.2315295601"; transcript_id "6.T43"; ref "0"; sample_id "6";
chr1	Cufflinks	transcript	894770	899167	1000	.	.	expr "0.1813954292"; transcript_id "6.T42"; ref "0"; sample_id "6";
chr1	Cufflinks	exon	894770	896091	1000	-	.	transcript_id "6.T43";
chr1	Cufflinks	exon	894770	899167	1000	.	.	transcript_id "6.T42";
chr1	Cufflinks	transcript	894836	896157	1000	.	.	expr "0.1777070486"; transcript_id "46.T28"; ref "0"; sample_id "46";
chr1	Cufflinks	transcript	894836	904238	1000	-	.	expr "0.0358336285"; transcript_id "46.T30"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	894836	896091	1000	-	.	transcript_id "46.T30";
chr1	Cufflinks	exon	894836	896157	1000	.	.	transcript_id "46.T28";
chr1	Cufflinks	transcript	894896	899107	1000	.	.	expr "0.1536695163"; transcript_id "12.T20"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	894896	899107	1000	.	.	transcript_id "12.T20";
chr1	Cufflinks	transcript	895172	898132	1000	-	.	expr "0.1495907087"; transcript_id "43.T23"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	895172	896091	1000	-	.	transcript_id "43.T23";
chr1	Cufflinks	transcript	896254	897893	1000	.	.	expr "0.1375508179"; transcript_id "46.T31"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	896254	897893	1000	.	.	transcript_id "46.T31";
chr1	Cufflinks	transcript	896832	897406	1000	.	.	expr "0.2379801623"; transcript_id "4.T43"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	896832	897406	1000	.	.	transcript_id "4.T43";
chr1	Cufflinks	transcript	897697	899245	1000	.	.	expr "0.1536363230"; transcript_id "49.T22"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	897697	899245	1000	.	.	transcript_id "49.T22";
chr1	Cufflinks	transcript	898020	904238	1000	.	.	expr "0.2494283229"; transcript_id "46.T29"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	898020	904238	1000	.	.	transcript_id "46.T29";
chr1	Cufflinks	exon	898087	898132	1000	-	.	transcript_id "43.T23";
chr1	Cufflinks	exon	898087	898240	1000	-	.	transcript_id "6.T43";
chr1	Cufflinks	exon	898087	899245	1000	-	.	transcript_id "49.T23";
chr1	Cufflinks	exon	898087	904238	1000	-	.	transcript_id "46.T30";
chr1	Cufflinks	exon	898778	899167	1000	-	.	transcript_id "6.T43";
chr1	Cufflinks	transcript	898803	899755	1000	.	.	expr "0.1521723810"; transcript_id "43.T24"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	898803	899755	1000	.	.	transcript_id "43.T24";
chr1	Cufflinks	transcript	899267	900459	1000	.	.	expr "0.1621476165"; transcript_id "29.T21"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	899267	900459	1000	.	.	transcript_id "29.T21";
chr1	Cufflinks	transcript	899319	900111	1000	.	.	expr "0.1693542039"; transcript_id "1.T32"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	899319	900111	1000	.	.	transcript_id "1.T32";
chr1	Cufflinks	transcript	899322	900795	1000	.	.	expr "0.1649639276"; transcript_id "32.T38"; ref "0"; sample_id "32";
chr1	Cufflinks	exon	899322	900795	1000	.	.	transcript_id "32.T38";
chr1	Cufflinks	transcript	899323	900611	1000	.	.	expr "0.2411569585"; transcript_id "49.T20"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	899323	900611	1000	.	.	transcript_id "49.T20";
chr1	Cufflinks	transcript	899354	900718	1000	.	.	expr "0.1892473256"; transcript_id "12.T22"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	899354	900718	1000	.	.	transcript_id "12.T22";
chr1	Cufflinks	transcript	899416	899772	1000	.	.	expr "2.4410797316"; transcript_id "47.T78"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	899416	899772	1000	.	.	transcript_id "47.T78";
chr1	Cufflinks	transcript	900221	901631	1000	.	.	expr "0.1156964749"; transcript_id "40.T26"; ref "0"; sample_id "40";
chr1	Cufflinks	exon	900221	901631	1000	.	.	transcript_id "40.T26";
chr1	Cufflinks	transcript	900683	902690	1000	.	.	expr "0.1634532904"; transcript_id "29.T22"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	900683	902690	1000	.	.	transcript_id "29.T22";
chr1	Cufflinks	transcript	900899	901862	1000	.	.	expr "0.1449694040"; transcript_id "49.T25"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	900899	901862	1000	.	.	transcript_id "49.T25";
chr1	Cufflinks	transcript	901078	901805	1000	.	.	expr "0.2188514029"; transcript_id "12.T21"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	901078	901805	1000	.	.	transcript_id "12.T21";
chr1	Cufflinks	transcript	901496	902593	1000	.	.	expr "0.1160075647"; transcript_id "43.T25"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	901496	902593	1000	.	.	transcript_id "43.T25";
chr1	Cufflinks	transcript	901860	904743	1000	-	.	expr "0.1253396452"; transcript_id "41.T29"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	901860	904480	1000	-	.	transcript_id "41.T29";
chr1	Cufflinks	transcript	901874	902462	1000	.	.	expr "0.2960927707"; transcript_id "12.T23"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	901874	902462	1000	.	.	transcript_id "12.T23";
chr1	Cufflinks	transcript	901894	902642	1000	.	.	expr "0.1830131932"; transcript_id "1.T33"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	901894	902642	1000	.	.	transcript_id "1.T33";
chr1	Cufflinks	transcript	902020	902965	1000	.	.	expr "0.1891809498"; transcript_id "40.T27"; ref "0"; sample_id "40";
chr1	Cufflinks	exon	902020	902965	1000	.	.	transcript_id "40.T27";
chr1	Cufflinks	transcript	902400	904250	1000	.	.	expr "0.2389175279"; transcript_id "32.T40"; ref "0"; sample_id "32";
chr1	Cufflinks	exon	902400	904250	1000	.	.	transcript_id "32.T40";
chr1	Cufflinks	transcript	902423	904229	1000	.	.	expr "0.2351284312"; transcript_id "42.T17"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	902423	904229	1000	.	.	transcript_id "42.T17";
chr1	Cufflinks	transcript	902493	903947	1000	.	.	expr "0.1284588013"; transcript_id "44.T28"; ref "0"; sample_id "44";
chr1	Cufflinks	exon	902493	903947	1000	.	.	transcript_id "44.T28";
chr1	Cufflinks	transcript	902661	903770	1000	.	.	expr "0.2813714075"; transcript_id "36.T37"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	902661	903770	1000	.	.	transcript_id "36.T37";
chr1	Cufflinks	transcript	902736	904214	1000	.	.	expr "0.2609033953"; transcript_id "49.T24"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	902736	904214	1000	.	.	transcript_id "49.T24";
chr1	Cufflinks	transcript	902822	903573	1000	.	.	expr "0.2911046272"; transcript_id "29.T23"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	902822	903573	1000	.	.	transcript_id "29.T23";
chr1	Cufflinks	transcript	902853	903811	1000	.	.	expr "0.1585703404"; transcript_id "1.T35"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	902853	903811	1000	.	.	transcript_id "1.T35";
chr1	Cufflinks	transcript	902955	904292	1000	.	.	expr "0.3262676679"; transcript_id "12.T25"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	902955	904292	1000	.	.	transcript_id "12.T25";
chr1	Cufflinks	transcript	902961	903977	1000	.	.	expr "0.2105307378"; transcript_id "17.T26"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	902961	903977	1000	.	.	transcript_id "17.T26";
chr1	Cufflinks	transcript	903167	904144	1000	.	.	expr "0.1757517899"; transcript_id "5.T29"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	903167	904144	1000	.	.	transcript_id "5.T29";
chr1	Cufflinks	transcript	903323	904214	1000	.	.	expr "0.1956870109"; transcript_id "43.T26"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	903323	904214	1000	.	.	transcript_id "43.T26";
chr1	Cufflinks	transcript	903834	904706	1000	.	.	expr "0.2917300375"; transcript_id "36.T35"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	903834	904706	1000	.	.	transcript_id "36.T35";
chr1	Cufflinks	transcript	904305	904770	1000	.	.	expr "0.9720986156"; transcript_id "42.T15"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	904305	904770	1000	.	.	transcript_id "42.T15";
chr1	Cufflinks	transcript	904307	904743	1000	.	.	expr "0.4857426069"; transcript_id "32.T39"; ref "0"; sample_id "32";
chr1	Cufflinks	exon	904307	904743	1000	.	.	transcript_id "32.T39";
chr1	Cufflinks	transcript	904360	908502	1000	.	.	expr "0.5495190274"; transcript_id "21.T28"; ref "0"; sample_id "21";
chr1	Cufflinks	exon	904360	908502	1000	.	.	transcript_id "21.T28";
chr1	Cufflinks	transcript	904465	908520	857	+	.	expr "0.3674792766"; transcript_id "20.T39"; ref "0"; sample_id "20";
chr1	Cufflinks	exon	904465	904961	857	+	.	transcript_id "20.T39";
chr1	Cufflinks	transcript	904467	906127	1000	+	.	expr "0.4977982251"; transcript_id "8.T41"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	904467	904961	1000	+	.	transcript_id "8.T41";
chr1	Cufflinks	transcript	904474	908491	1000	+	.	expr "0.2971700306"; transcript_id "54.T26"; ref "0"; sample_id "54";
chr1	Cufflinks	exon	904474	904961	1000	+	.	transcript_id "54.T26";
chr1	Cufflinks	transcript	904485	908523	1000	.	.	expr "0.9602228649"; transcript_id "49.T26"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	904485	908523	1000	.	.	transcript_id "49.T26";
chr1	Cufflinks	exon	904579	904743	1000	-	.	transcript_id "41.T29";
chr1	Cufflinks	transcript	904754	908521	1000	-	.	expr "4.6346232952"; transcript_id "13.T37"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	904754	908521	1000	-	.	transcript_id "13.T37";
chr1	Cufflinks	transcript	904810	914803	1000	+	.	expr "1.0434065711"; transcript_id "47.T83"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	904810	904961	1000	+	.	transcript_id "47.T83";
chr1	Cufflinks	transcript	904818	908520	1000	+	.	expr "0.7342487671"; transcript_id "9.T21"; ref "0"; sample_id "9";
chr1	Cufflinks	transcript	904818	921918	1000	+	.	expr "7.1733725131"; transcript_id "32.T47"; ref "0"; sample_id "32";
chr1	Cufflinks	exon	904818	904961	1000	+	.	transcript_id "32.T47";
chr1	Cufflinks	exon	904818	904961	1000	+	.	transcript_id "9.T21";
chr1	Cufflinks	transcript	904820	923732	1000	+	.	expr "1.4046507782"; transcript_id "10.T30"; ref "0"; sample_id "10";
chr1	Cufflinks	exon	904820	908212	1000	+	.	transcript_id "10.T30";
chr1	Cufflinks	transcript	904826	906441	1000	+	.	expr "0.1822131312"; transcript_id "14.T17"; ref "0"; sample_id "14";
chr1	Cufflinks	transcript	904826	908446	1000	+	.	expr "0.1939841387"; transcript_id "1.T37"; ref "0"; sample_id "1";
chr1	Cufflinks	transcript	904826	908491	1000	+	.	expr "0.3112957674"; transcript_id "15.T12"; ref "0"; sample_id "15";
chr1	Cufflinks	exon	904826	904961	1000	+	.	transcript_id "1.T37";
chr1	Cufflinks	exon	904826	904961	1000	+	.	transcript_id "14.T17";
chr1	Cufflinks	exon	904826	904961	1000	+	.	transcript_id "15.T12";
chr1	HAVANA	transcript	904834	915976	.	+	.	expr "0.0"; transcript_id "R.T144"; ref "1"; sample_id "R";
chr1	HAVANA	exon	904834	904957	.	+	.	transcript_id "R.T144";
chr1	Cufflinks	transcript	904839	917038	639	+	.	expr "0.1165178408"; transcript_id "14.T18"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	904839	904961	639	+	.	transcript_id "14.T18";
chr1	Cufflinks	transcript	904863	908483	1000	+	.	expr "0.1990575562"; transcript_id "25.T33"; ref "0"; sample_id "25";
chr1	Cufflinks	exon	904863	905679	1000	+	.	transcript_id "25.T33";
chr1	Cufflinks	transcript	904914	907686	379	+	.	expr "0.1238314844"; transcript_id "52.T32"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	904914	904961	379	+	.	transcript_id "52.T32";
chr1	Cufflinks	transcript	904915	907686	1000	+	.	expr "0.3263667853"; transcript_id "52.T33"; ref "0"; sample_id "52";
chr1	Cufflinks	transcript	904915	907686	376	+	.	expr "0.1227941475"; transcript_id "52.T34"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	904915	904961	1000	+	.	transcript_id "52.T33";
chr1	Cufflinks	exon	904915	904961	376	+	.	transcript_id "52.T34";
chr1	Cufflinks	transcript	905023	908502	1000	+	.	expr "0.8116592387"; transcript_id "21.T29"; ref "0"; sample_id "21";
chr1	Cufflinks	exon	905023	905679	1000	+	.	transcript_id "21.T29";
chr1	Cufflinks	transcript	905024	908520	1000	+	.	expr "0.4283173316"; transcript_id "20.T40"; ref "0"; sample_id "20";
chr1	Cufflinks	transcript	905024	908520	1000	.	.	expr "0.2635461698"; transcript_id "20.T42"; ref "0"; sample_id "20";
chr1	Cufflinks	transcript	905024	908520	873	+	.	expr "0.3739558101"; transcript_id "20.T41"; ref "0"; sample_id "20";
chr1	Cufflinks	exon	905024	905679	1000	+	.	transcript_id "20.T40";
chr1	Cufflinks	exon	905024	905987	873	+	.	transcript_id "20.T41";
chr1	Cufflinks	exon	905024	908520	1000	.	.	transcript_id "20.T42";
chr1	Cufflinks	transcript	905025	908502	1000	+	.	expr "0.1892615830"; transcript_id "19.T20"; ref "0"; sample_id "19";
chr1	Cufflinks	transcript	905025	908502	1000	.	.	expr "0.4174261755"; transcript_id "19.T19"; ref "0"; sample_id "19";
chr1	Cufflinks	transcript	905025	944053	1000	+	.	expr "8.4312459559"; transcript_id "6.T50"; ref "0"; sample_id "6";
chr1	Cufflinks	exon	905025	905661	1000	+	.	transcript_id "19.T20";
chr1	Cufflinks	exon	905025	905679	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	905025	908502	1000	.	.	transcript_id "19.T19";
chr1	Cufflinks	transcript	905033	908063	1000	.	.	expr "0.0876333388"; transcript_id "25.T34"; ref "0"; sample_id "25";
chr1	Cufflinks	exon	905033	908063	1000	.	.	transcript_id "25.T34";
chr1	Cufflinks	transcript	905036	935888	750	+	.	expr "3.8837623191"; transcript_id "43.T32"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	905036	908212	750	+	.	transcript_id "43.T32";
chr1	Cufflinks	transcript	905046	911973	1000	+	.	expr "0.2668327140"; transcript_id "26.T38"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	905046	905987	1000	+	.	transcript_id "26.T38";
chr1	Cufflinks	transcript	905056	908520	904	+	.	expr "0.6639645615"; transcript_id "9.T22"; ref "0"; sample_id "9";
chr1	Cufflinks	exon	905056	905679	904	+	.	transcript_id "9.T22";
chr1	Cufflinks	transcript	905069	908491	1000	.	.	expr "0.4526105313"; transcript_id "15.T13"; ref "0"; sample_id "15";
chr1	Cufflinks	exon	905069	908491	1000	.	.	transcript_id "15.T13";
chr1	Cufflinks	transcript	905071	908500	1000	.	.	expr "0.8348649638"; transcript_id "8.T42"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	905071	908500	1000	.	.	transcript_id "8.T42";
chr1	Cufflinks	transcript	905072	908114	1000	+	.	expr "0.1703851514"; transcript_id "27.T35"; ref "0"; sample_id "27";
chr1	Cufflinks	transcript	905072	908114	652	+	.	expr "0.1111940731"; transcript_id "27.T36"; ref "0"; sample_id "27";
chr1	Cufflinks	transcript	905072	908494	1000	.	.	expr "0.4290412037"; transcript_id "27.T37"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	905072	905679	1000	+	.	transcript_id "27.T35";
chr1	Cufflinks	exon	905072	905987	652	+	.	transcript_id "27.T36";
chr1	Cufflinks	exon	905072	908494	1000	.	.	transcript_id "27.T37";
chr1	Cufflinks	transcript	905074	908491	1000	.	.	expr "0.2670317748"; transcript_id "54.T28"; ref "0"; sample_id "54";
chr1	Cufflinks	transcript	905074	908506	1000	.	.	expr "0.3686718099"; transcript_id "33.T18"; ref "0"; sample_id "33";
chr1	Cufflinks	exon	905074	908491	1000	.	.	transcript_id "54.T28";
chr1	Cufflinks	exon	905074	908506	1000	.	.	transcript_id "33.T18";
chr1	Cufflinks	transcript	905084	908446	892	+	.	expr "0.1731101359"; transcript_id "1.T38"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	905084	905987	892	+	.	transcript_id "1.T38";
chr1	Cufflinks	transcript	905087	908475	1000	.	.	expr "1.9198940033"; transcript_id "47.T84"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	905087	908475	1000	.	.	transcript_id "47.T84";
chr1	Cufflinks	transcript	905099	908518	1000	.	.	expr "1.6754434495"; transcript_id "4.T44"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	905099	908518	1000	.	.	transcript_id "4.T44";
chr1	Cufflinks	transcript	905109	907192	1000	.	.	expr "0.6047733504"; transcript_id "35.T17"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	905109	907192	1000	.	.	transcript_id "35.T17";
chr1	Cufflinks	transcript	905112	908491	703	+	.	expr "0.2090253891"; transcript_id "54.T27"; ref "0"; sample_id "54";
chr1	Cufflinks	exon	905112	905679	703	+	.	transcript_id "54.T27";
chr1	Cufflinks	transcript	905116	906363	1000	.	.	expr "0.2199792490"; transcript_id "30.T13"; ref "0"; sample_id "30";
chr1	Cufflinks	exon	905116	906363	1000	.	.	transcript_id "30.T13";
chr1	Cufflinks	transcript	905132	905953	1000	+	.	expr "0.4867449907"; transcript_id "28.T23"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	905132	905662	1000	+	.	transcript_id "28.T23";
chr1	Cufflinks	transcript	905256	908516	1000	+	.	expr "0.3270899233"; transcript_id "5.T33"; ref "0"; sample_id "5";
chr1	Cufflinks	transcript	905256	908516	230	+	.	expr "0.0752443448"; transcript_id "5.T32"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	905256	905679	1000	+	.	transcript_id "5.T33";
chr1	Cufflinks	exon	905256	905987	230	+	.	transcript_id "5.T32";
chr1	Cufflinks	exon	905295	905679	1000	+	.	transcript_id "1.T37";
chr1	Cufflinks	exon	905295	905679	1000	+	.	transcript_id "14.T17";
chr1	Cufflinks	exon	905295	905679	1000	+	.	transcript_id "54.T26";
chr1	Cufflinks	exon	905295	905679	1000	+	.	transcript_id "8.T41";
chr1	Cufflinks	exon	905295	905679	1000	+	.	transcript_id "9.T21";
chr1	Cufflinks	exon	905295	905679	376	+	.	transcript_id "52.T34";
chr1	Cufflinks	exon	905295	905679	857	+	.	transcript_id "20.T39";
chr1	Cufflinks	exon	905295	905987	1000	+	.	transcript_id "15.T12";
chr1	Cufflinks	exon	905295	907686	1000	+	.	transcript_id "52.T33";
chr1	Cufflinks	exon	905295	908212	1000	+	.	transcript_id "47.T83";
chr1	Cufflinks	transcript	905479	907479	1000	.	.	expr "0.1272811460"; transcript_id "55.T34"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	905479	907479	1000	.	.	transcript_id "55.T34";
chr1	Cufflinks	transcript	905516	907479	1000	+	.	expr "0.1293998522"; transcript_id "55.T35"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	905516	905661	1000	+	.	transcript_id "55.T35";
chr1	Cufflinks	exon	905802	905987	1000	+	.	transcript_id "5.T33";
chr1	Cufflinks	exon	905802	905987	857	+	.	transcript_id "20.T39";
chr1	Cufflinks	exon	905802	905987	904	+	.	transcript_id "9.T22";
chr1	Cufflinks	exon	905802	906127	1000	+	.	transcript_id "8.T41";
chr1	Cufflinks	exon	905802	906441	1000	+	.	transcript_id "14.T17";
chr1	Cufflinks	exon	905802	907479	1000	+	.	transcript_id "55.T35";
chr1	Cufflinks	exon	905802	907686	376	+	.	transcript_id "52.T34";
chr1	Cufflinks	exon	905802	907686	379	+	.	transcript_id "52.T32";
chr1	Cufflinks	exon	905802	908114	1000	+	.	transcript_id "27.T35";
chr1	Cufflinks	exon	905802	908212	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	905802	908446	1000	+	.	transcript_id "1.T37";
chr1	Cufflinks	exon	905802	908483	1000	+	.	transcript_id "25.T33";
chr1	Cufflinks	exon	905802	908491	1000	+	.	transcript_id "54.T26";
chr1	Cufflinks	exon	905802	908491	703	+	.	transcript_id "54.T27";
chr1	Cufflinks	exon	905802	908502	1000	+	.	transcript_id "19.T20";
chr1	Cufflinks	exon	905802	908502	1000	+	.	transcript_id "21.T29";
chr1	Cufflinks	exon	905802	908520	1000	+	.	transcript_id "20.T40";
chr1	Cufflinks	exon	905802	908520	1000	+	.	transcript_id "9.T21";
chr1	Cufflinks	exon	905803	905953	1000	+	.	transcript_id "28.T23";
chr1	Cufflinks	transcript	905815	908516	1000	.	.	expr "0.1500277952"; transcript_id "5.T34"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	905815	908516	1000	.	.	transcript_id "5.T34";
chr1	Cufflinks	transcript	905829	906971	1000	.	.	expr "0.1463705746"; transcript_id "41.T30"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	905829	906971	1000	.	.	transcript_id "41.T30";
chr1	Cufflinks	transcript	905871	907974	1000	.	.	expr "0.1566082545"; transcript_id "51.T45"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	905871	907974	1000	.	.	transcript_id "51.T45";
chr1	Cufflinks	transcript	905937	920640	1000	+	.	expr "2.7325580939"; transcript_id "17.T33"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	905937	905987	1000	+	.	transcript_id "17.T33";
chr1	Cufflinks	exon	906239	908114	652	+	.	transcript_id "27.T36";
chr1	Cufflinks	exon	906239	908446	892	+	.	transcript_id "1.T38";
chr1	Cufflinks	exon	906239	908491	1000	+	.	transcript_id "15.T12";
chr1	Cufflinks	exon	906239	908516	230	+	.	transcript_id "5.T32";
chr1	Cufflinks	exon	906239	908520	857	+	.	transcript_id "20.T39";
chr1	Cufflinks	exon	906239	908520	873	+	.	transcript_id "20.T41";
chr1	Cufflinks	exon	906239	908520	904	+	.	transcript_id "9.T22";
chr1	Cufflinks	transcript	906380	908050	1000	.	.	expr "0.2368742192"; transcript_id "11.T11"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	906380	908050	1000	.	.	transcript_id "11.T11";
chr1	Cufflinks	transcript	906485	907813	1000	.	.	expr "0.2119019475"; transcript_id "39.T26"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	906485	907813	1000	.	.	transcript_id "39.T26";
chr1	Cufflinks	transcript	906525	908476	1000	.	.	expr "0.1762166542"; transcript_id "24.T33"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	906525	908476	1000	.	.	transcript_id "24.T33";
chr1	Cufflinks	transcript	906590	907561	1000	.	.	expr "0.2727422106"; transcript_id "14.T19"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	906590	907561	1000	.	.	transcript_id "14.T19";
chr1	Cufflinks	transcript	906706	907441	1000	.	.	expr "2.4042052503"; transcript_id "16.T81"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	906706	907441	1000	.	.	transcript_id "16.T81";
chr1	Cufflinks	transcript	906931	908488	1000	.	.	expr "0.1382558915"; transcript_id "45.T24"; ref "0"; sample_id "45";
chr1	Cufflinks	exon	906931	908488	1000	.	.	transcript_id "45.T24";
chr1	Cufflinks	transcript	907346	908494	1000	.	.	expr "0.4377169383"; transcript_id "35.T18"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	907346	908494	1000	.	.	transcript_id "35.T18";
chr1	Cufflinks	transcript	907764	908168	1000	.	.	expr "3.3472994465"; transcript_id "16.T83"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	907764	908168	1000	.	.	transcript_id "16.T83";
chr1	Cufflinks	exon	908066	908212	1000	+	.	transcript_id "26.T38";
chr1	Cufflinks	exon	908101	908488	1000	+	.	transcript_id "17.T33";
chr1	Cufflinks	exon	908101	908516	1000	+	.	transcript_id "5.T33";
chr1	Cufflinks	transcript	908183	921796	748	+	.	expr "0.2051864773"; transcript_id "50.T41"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	908183	908220	748	+	.	transcript_id "50.T41";
chr1	Cufflinks	transcript	908199	942659	1000	+	.	expr "3.0862819597"; transcript_id "48.T50"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	908199	908212	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	transcript	908825	923220	1000	.	.	expr "1.8485550710"; transcript_id "43.T35"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	908825	923220	1000	.	.	transcript_id "43.T35";
chr1	Cufflinks	transcript	908831	933723	1000	-	.	expr "1.5110911522"; transcript_id "13.T45"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	908831	922509	1000	-	.	transcript_id "13.T45";
chr1	Cufflinks	transcript	908834	909947	1000	.	.	expr "0.1668827495"; transcript_id "9.T20"; ref "0"; sample_id "9";
chr1	Cufflinks	transcript	908834	909959	1000	+	.	expr "0.9197798573"; transcript_id "21.T27"; ref "0"; sample_id "21";
chr1	Cufflinks	transcript	908834	909959	1000	.	.	expr "0.1794704894"; transcript_id "21.T26"; ref "0"; sample_id "21";
chr1	Cufflinks	transcript	908834	909979	1000	.	.	expr "0.3038294371"; transcript_id "4.T45"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	908834	909284	1000	+	.	transcript_id "21.T27";
chr1	Cufflinks	exon	908834	909947	1000	.	.	transcript_id "9.T20";
chr1	Cufflinks	exon	908834	909959	1000	.	.	transcript_id "21.T26";
chr1	Cufflinks	exon	908834	909979	1000	.	.	transcript_id "4.T45";
chr1	Cufflinks	transcript	908837	909982	1000	.	.	expr "0.6303693586"; transcript_id "46.T26"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	908837	909982	1000	.	.	transcript_id "46.T26";
chr1	Cufflinks	transcript	908838	909368	1000	.	.	expr "0.2297008089"; transcript_id "36.T38"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	908838	909368	1000	.	.	transcript_id "36.T38";
chr1	Cufflinks	transcript	908847	909977	1000	+	.	expr "0.7101574994"; transcript_id "40.T28"; ref "0"; sample_id "40";
chr1	Cufflinks	exon	908847	909464	1000	+	.	transcript_id "40.T28";
chr1	Cufflinks	transcript	908848	909304	1000	.	.	expr "0.6281175153"; transcript_id "20.T34"; ref "0"; sample_id "20";
chr1	Cufflinks	exon	908848	909304	1000	.	.	transcript_id "20.T34";
chr1	Cufflinks	transcript	908849	909965	1000	-	.	expr "0.2438316201"; transcript_id "42.T18"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	908849	909433	1000	-	.	transcript_id "42.T18";
chr1	Cufflinks	transcript	908850	909963	1000	.	.	expr "0.1529615772"; transcript_id "54.T25"; ref "0"; sample_id "54";
chr1	Cufflinks	exon	908850	909963	1000	.	.	transcript_id "54.T25";
chr1	Cufflinks	transcript	908851	909973	1000	+	.	expr "0.0813379458"; transcript_id "53.T37"; ref "0"; sample_id "53";
chr1	Cufflinks	transcript	908851	909973	1000	.	.	expr "0.1199133239"; transcript_id "53.T36"; ref "0"; sample_id "53";
chr1	Cufflinks	exon	908851	909160	1000	+	.	transcript_id "53.T37";
chr1	Cufflinks	exon	908851	909973	1000	.	.	transcript_id "53.T36";
chr1	Cufflinks	transcript	908852	910069	1000	.	.	expr "0.1183428906"; transcript_id "2.T31"; ref "0"; sample_id "2";
chr1	Cufflinks	transcript	908852	922471	1000	.	.	expr "2.1606962344"; transcript_id "29.T26"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	908852	910069	1000	.	.	transcript_id "2.T31";
chr1	Cufflinks	exon	908852	922471	1000	.	.	transcript_id "29.T26";
chr1	Cufflinks	transcript	908857	909948	1000	.	.	expr "0.2508627340"; transcript_id "27.T34"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	908857	909948	1000	.	.	transcript_id "27.T34";
chr1	Cufflinks	transcript	908859	909969	432	.	.	expr "0.1443758903"; transcript_id "7.T23"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	908859	909969	432	.	.	transcript_id "7.T23";
chr1	Cufflinks	transcript	908861	909964	1000	.	.	expr "0.1559916935"; transcript_id "15.T11"; ref "0"; sample_id "15";
chr1	Cufflinks	exon	908861	909964	1000	.	.	transcript_id "15.T11";
chr1	Cufflinks	transcript	908865	910081	1000	.	.	expr "1.1063936468"; transcript_id "22.T33"; ref "0"; sample_id "22";
chr1	Cufflinks	exon	908865	910081	1000	.	.	transcript_id "22.T33";
chr1	Cufflinks	transcript	908869	909967	1000	.	.	expr "0.3101055029"; transcript_id "10.T32"; ref "0"; sample_id "10";
chr1	Cufflinks	exon	908869	909967	1000	.	.	transcript_id "10.T32";
chr1	Cufflinks	transcript	908873	909963	1000	-	.	expr "0.1578754731"; transcript_id "34.T23"; ref "0"; sample_id "34";
chr1	Cufflinks	transcript	908873	910016	1000	.	.	expr "0.1346868942"; transcript_id "34.T24"; ref "0"; sample_id "34";
chr1	Cufflinks	exon	908873	909433	1000	-	.	transcript_id "34.T23";
chr1	Cufflinks	exon	908873	910016	1000	.	.	transcript_id "34.T24";
chr1	Cufflinks	transcript	908879	909502	1000	.	.	expr "0.2353167603"; transcript_id "24.T32"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	908879	909502	1000	.	.	transcript_id "24.T32";
chr1	Cufflinks	transcript	908880	909960	1000	-	.	expr "0.3816969899"; transcript_id "8.T40"; ref "0"; sample_id "8";
chr1	Cufflinks	transcript	908880	909960	1000	.	.	expr "0.1250011810"; transcript_id "8.T39"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	908880	909433	1000	-	.	transcript_id "8.T40";
chr1	Cufflinks	exon	908880	909960	1000	.	.	transcript_id "8.T39";
chr1	Cufflinks	transcript	908887	909396	1000	.	.	expr "0.7465364369"; transcript_id "47.T86"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	908887	909396	1000	.	.	transcript_id "47.T86";
chr1	Cufflinks	transcript	908909	909973	1000	-	.	expr "0.2218704178"; transcript_id "53.T38"; ref "0"; sample_id "53";
chr1	Cufflinks	exon	908909	909433	1000	-	.	transcript_id "53.T38";
chr1	Cufflinks	transcript	908937	923012	902	-	.	expr "0.5583661256"; transcript_id "49.T28"; ref "0"; sample_id "49";
chr1	Cufflinks	transcript	908937	923138	1000	-	.	expr "0.6185794449"; transcript_id "49.T29"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	908937	909433	1000	-	.	transcript_id "49.T29";
chr1	Cufflinks	exon	908937	909433	902	-	.	transcript_id "49.T28";
chr1	Cufflinks	transcript	908946	910045	1000	.	.	expr "0.1144748751"; transcript_id "28.T24"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	908946	910045	1000	.	.	transcript_id "28.T24";
chr1	Cufflinks	transcript	909119	909976	1000	-	.	expr "0.2227943617"; transcript_id "46.T27"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	909119	909524	1000	-	.	transcript_id "46.T27";
chr1	Cufflinks	exon	909465	909973	1000	+	.	transcript_id "53.T37";
chr1	Cufflinks	transcript	909475	909970	1000	.	.	expr "0.3335993195"; transcript_id "7.T24"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	909475	909970	1000	.	.	transcript_id "7.T24";
chr1	Cufflinks	exon	909525	909632	1000	-	.	transcript_id "49.T29";
chr1	Cufflinks	exon	909525	909632	902	-	.	transcript_id "49.T28";
chr1	Cufflinks	exon	909525	909963	1000	-	.	transcript_id "34.T23";
chr1	Cufflinks	exon	909525	909965	1000	-	.	transcript_id "42.T18";
chr1	Cufflinks	transcript	909632	909957	1000	.	.	expr "0.6249037081"; transcript_id "44.T27"; ref "0"; sample_id "44";
chr1	Cufflinks	exon	909632	909957	1000	.	.	transcript_id "44.T27";
chr1	Cufflinks	exon	909641	909977	1000	+	.	transcript_id "40.T28";
chr1	Cufflinks	exon	909700	909960	1000	-	.	transcript_id "8.T40";
chr1	Cufflinks	exon	909700	909973	1000	-	.	transcript_id "53.T38";
chr1	Cufflinks	exon	909700	909976	1000	-	.	transcript_id "46.T27";
chr1	Cufflinks	exon	909731	909959	1000	+	.	transcript_id "21.T27";
chr1	Cufflinks	exon	909763	917486	902	-	.	transcript_id "49.T28";
chr1	Cufflinks	exon	909763	918175	1000	-	.	transcript_id "49.T29";
chr1	Cufflinks	transcript	910137	943938	1000	+	.	expr "2.1407516493"; transcript_id "31.T41"; ref "0"; sample_id "31";
chr1	Cufflinks	exon	910137	914444	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	transcript	910153	920320	1000	+	.	expr "2.6322740704"; transcript_id "13.T46"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	910153	913109	1000	+	.	transcript_id "13.T46";
chr1	Cufflinks	transcript	910172	923732	991	+	.	expr "1.3920961185"; transcript_id "10.T31"; ref "0"; sample_id "10";
chr1	Cufflinks	exon	910172	914444	991	+	.	transcript_id "10.T31";
chr1	Cufflinks	transcript	910175	918017	1000	.	.	expr "0.9086094655"; transcript_id "4.T53"; ref "0"; sample_id "4";
chr1	Cufflinks	transcript	910175	923473	1000	+	.	expr "1.4444492324"; transcript_id "4.T54"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	910175	915471	1000	+	.	transcript_id "4.T54";
chr1	Cufflinks	exon	910175	918017	1000	.	.	transcript_id "4.T53";
chr1	Cufflinks	transcript	910180	934017	1000	-	.	expr "2.9981397004"; transcript_id "46.T41"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	910180	922509	1000	-	.	transcript_id "46.T41";
chr1	Cufflinks	transcript	910183	923857	1000	.	.	expr "14.5765372521"; transcript_id "22.T54"; ref "0"; sample_id "22";
chr1	Cufflinks	exon	910183	923857	1000	.	.	transcript_id "22.T54";
chr1	Cufflinks	transcript	910185	912344	1000	.	.	expr "0.4579656570"; transcript_id "35.T22"; ref "0"; sample_id "35";
chr1	Cufflinks	transcript	910185	932076	407	+	.	expr "2.1062735709"; transcript_id "43.T33"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	910185	912344	1000	.	.	transcript_id "35.T22";
chr1	Cufflinks	exon	910185	914444	407	+	.	transcript_id "43.T33";
chr1	Cufflinks	transcript	910187	922059	1000	+	.	expr "0.1529382265"; transcript_id "27.T42"; ref "0"; sample_id "27";
chr1	Cufflinks	transcript	910187	922059	850	+	.	expr "0.1300437182"; transcript_id "27.T43"; ref "0"; sample_id "27";
chr1	Cufflinks	transcript	910187	922059	957	+	.	expr "0.1464223412"; transcript_id "27.T44"; ref "0"; sample_id "27";
chr1	Cufflinks	transcript	910187	922990	1000	-	.	expr "0.3234467665"; transcript_id "27.T45"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	910187	915235	957	+	.	transcript_id "27.T44";
chr1	Cufflinks	exon	910187	915471	1000	+	.	transcript_id "27.T42";
chr1	Cufflinks	exon	910187	915471	850	+	.	transcript_id "27.T43";
chr1	Cufflinks	exon	910187	917722	1000	-	.	transcript_id "27.T45";
chr1	Cufflinks	transcript	910192	911651	1000	.	.	expr "0.2802918260"; transcript_id "28.T25"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	910192	911651	1000	.	.	transcript_id "28.T25";
chr1	Cufflinks	transcript	910221	912830	1000	.	.	expr "0.2422591187"; transcript_id "5.T30"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	910221	912830	1000	.	.	transcript_id "5.T30";
chr1	Cufflinks	transcript	910233	923827	1000	-	.	expr "5.2174176849"; transcript_id "7.T30"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	910233	922714	1000	-	.	transcript_id "7.T30";
chr1	Cufflinks	transcript	910238	940188	354	+	.	expr "2.5598722551"; transcript_id "21.T37"; ref "0"; sample_id "21";
chr1	Cufflinks	exon	910238	914444	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	transcript	910272	923866	1000	+	.	expr "0.6405737998"; transcript_id "42.T28"; ref "0"; sample_id "42";
chr1	Cufflinks	transcript	910272	923866	533	+	.	expr "0.3415169721"; transcript_id "42.T29"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	910272	914444	1000	+	.	transcript_id "42.T28";
chr1	Cufflinks	exon	910272	915471	533	+	.	transcript_id "42.T29";
chr1	Cufflinks	transcript	910275	923866	1000	-	.	expr "0.3483283152"; transcript_id "42.T30"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	910275	922714	1000	-	.	transcript_id "42.T30";
chr1	Cufflinks	transcript	910282	914920	1000	.	.	expr "0.2499341200"; transcript_id "51.T46"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	910282	914920	1000	.	.	transcript_id "51.T46";
chr1	Cufflinks	transcript	910303	915575	1000	+	.	expr "0.4324999195"; transcript_id "52.T31"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	910303	914444	1000	+	.	transcript_id "52.T31";
chr1	Cufflinks	transcript	910416	910785	1000	.	.	expr "1.5343606531"; transcript_id "16.T84"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	910416	910785	1000	.	.	transcript_id "16.T84";
chr1	Cufflinks	transcript	910417	913080	1000	.	.	expr "0.2358199592"; transcript_id "45.T27"; ref "0"; sample_id "45";
chr1	Cufflinks	exon	910417	913080	1000	.	.	transcript_id "45.T27";
chr1	Cufflinks	transcript	910425	921796	1000	+	.	expr "0.2743014285"; transcript_id "50.T42"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	910425	914444	1000	+	.	transcript_id "50.T42";
chr1	Cufflinks	transcript	910445	914875	1000	.	.	expr "0.2631650360"; transcript_id "50.T44"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	910445	914875	1000	.	.	transcript_id "50.T44";
chr1	Cufflinks	transcript	910467	910725	1000	.	.	expr "5.2651292667"; transcript_id "47.T87"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	910467	910725	1000	.	.	transcript_id "47.T87";
chr1	Cufflinks	transcript	910729	911640	866	.	.	expr "0.2428513343"; transcript_id "28.T26"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	910729	911640	866	.	.	transcript_id "28.T26";
chr1	Cufflinks	transcript	910827	911493	1000	.	.	expr "0.5887501878"; transcript_id "14.T20"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	910827	911493	1000	.	.	transcript_id "14.T20";
chr1	Cufflinks	transcript	910856	911497	1000	.	.	expr "3.6647100191"; transcript_id "47.T88"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	910856	911497	1000	.	.	transcript_id "47.T88";
chr1	Cufflinks	exon	910868	914444	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	transcript	911067	911765	1000	.	.	expr "2.2231710694"; transcript_id "16.T86"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	911067	911765	1000	.	.	transcript_id "16.T86";
chr1	HAVANA	transcript	911435	914948	.	+	.	expr "0.0"; transcript_id "R.T145"; ref "1"; sample_id "R";
chr1	HAVANA	exon	911435	911473	.	+	.	transcript_id "R.T145";
chr1	Cufflinks	transcript	911595	914645	1000	.	.	expr "0.3152221417"; transcript_id "26.T39"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	911595	914645	1000	.	.	transcript_id "26.T39";
chr1	Cufflinks	transcript	911605	914803	1000	.	.	expr "2.5659112593"; transcript_id "47.T85"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	911605	914803	1000	.	.	transcript_id "47.T85";
chr1	Cufflinks	transcript	911674	913501	1000	.	.	expr "0.2736685821"; transcript_id "30.T14"; ref "0"; sample_id "30";
chr1	Cufflinks	exon	911674	913501	1000	.	.	transcript_id "30.T14";
chr1	Cufflinks	transcript	911892	914228	1000	.	.	expr "0.2653832387"; transcript_id "14.T21"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	911892	914228	1000	.	.	transcript_id "14.T21";
chr1	Cufflinks	transcript	911942	942605	1000	+	.	expr "5.1083877781"; transcript_id "29.T27"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	911942	915235	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	911945	911973	1000	+	.	transcript_id "26.T38";
chr1	Cufflinks	exon	911945	914803	1000	+	.	transcript_id "47.T83";
chr1	Cufflinks	exon	911945	915471	1000	+	.	transcript_id "10.T30";
chr1	Cufflinks	exon	911945	915471	750	+	.	transcript_id "43.T32";
chr1	HAVANA	exon	911945	914948	.	+	.	transcript_id "R.T145";
chr1	Cufflinks	exon	911953	915029	748	+	.	transcript_id "50.T41";
chr1	Cufflinks	transcript	911964	912523	1000	.	.	expr "1.3886356123"; transcript_id "16.T85"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	911964	912523	1000	.	.	transcript_id "16.T85";
chr1	Cufflinks	transcript	911982	912919	1000	.	.	expr "0.2727747236"; transcript_id "11.T12"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	911982	912919	1000	.	.	transcript_id "11.T12";
chr1	Cufflinks	transcript	912461	913965	1000	.	.	expr "0.3371155695"; transcript_id "55.T32"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	912461	913965	1000	.	.	transcript_id "55.T32";
chr1	Cufflinks	transcript	912476	914899	1000	.	.	expr "0.5459597038"; transcript_id "35.T23"; ref "0"; sample_id "35";
chr1	Cufflinks	transcript	912476	914903	1000	+	.	expr "0.4582573777"; transcript_id "35.T24"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	912476	914444	1000	+	.	transcript_id "35.T24";
chr1	Cufflinks	exon	912476	914899	1000	.	.	transcript_id "35.T23";
chr1	Cufflinks	transcript	912662	914611	1000	.	.	expr "1.4156660159"; transcript_id "16.T87"; ref "0"; sample_id "16";
chr1	Cufflinks	transcript	912662	915050	1000	+	.	expr "0.9066662571"; transcript_id "16.T89"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	912662	914444	1000	+	.	transcript_id "16.T89";
chr1	Cufflinks	exon	912662	914611	1000	.	.	transcript_id "16.T87";
chr1	Cufflinks	transcript	912716	915022	1000	.	.	expr "0.2541662194"; transcript_id "24.T34"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	912716	915022	1000	.	.	transcript_id "24.T34";
chr1	Cufflinks	transcript	913043	914225	1000	.	.	expr "0.2359570687"; transcript_id "5.T31"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	913043	914225	1000	.	.	transcript_id "5.T31";
chr1	Cufflinks	transcript	913103	914000	1000	.	.	expr "0.2727571723"; transcript_id "39.T25"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	913103	914000	1000	.	.	transcript_id "39.T25";
chr1	Cufflinks	transcript	913234	914067	1000	.	.	expr "0.3452347306"; transcript_id "11.T13"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	913234	914067	1000	.	.	transcript_id "11.T13";
chr1	Cufflinks	transcript	913502	914795	1000	.	.	expr "0.1982296722"; transcript_id "30.T15"; ref "0"; sample_id "30";
chr1	Cufflinks	exon	913502	914795	1000	.	.	transcript_id "30.T15";
chr1	Cufflinks	exon	913525	914444	1000	+	.	transcript_id "13.T46";
chr1	Cufflinks	transcript	914121	915475	1000	+	.	expr "0.3457942640"; transcript_id "11.T14"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	914121	914444	1000	+	.	transcript_id "11.T14";
chr1	HAVANA	transcript	914171	914971	.	+	.	expr "0.0"; transcript_id "R.T146"; ref "1"; sample_id "R";
chr1	HAVANA	exon	914171	914444	.	+	.	transcript_id "R.T146";
chr1	Cufflinks	transcript	914379	916942	1000	+	.	expr "0.2104787599"; transcript_id "55.T33"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	914379	915471	1000	+	.	transcript_id "55.T33";
chr1	Cufflinks	transcript	914713	915229	1000	.	.	expr "2.9802685952"; transcript_id "16.T88"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	914713	915229	1000	.	.	transcript_id "16.T88";
chr1	Cufflinks	exon	914803	914903	1000	+	.	transcript_id "35.T24";
chr1	Cufflinks	exon	914803	915010	1000	+	.	transcript_id "11.T14";
chr1	Cufflinks	exon	914803	915029	1000	+	.	transcript_id "50.T42";
chr1	Cufflinks	exon	914803	915045	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	914803	915235	1000	+	.	transcript_id "42.T28";
chr1	Cufflinks	exon	914803	915235	991	+	.	transcript_id "10.T31";
chr1	Cufflinks	exon	914803	915471	1000	+	.	transcript_id "13.T46";
chr1	Cufflinks	exon	914803	915471	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	914803	915471	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	914803	915471	407	+	.	transcript_id "43.T33";
chr1	Cufflinks	exon	914803	915575	1000	+	.	transcript_id "52.T31";
chr1	HAVANA	exon	914803	914971	.	+	.	transcript_id "R.T146";
chr1	Cufflinks	exon	914835	915050	1000	+	.	transcript_id "16.T89";
chr1	Cufflinks	transcript	915019	921257	1000	+	.	expr "0.3526427323"; transcript_id "51.T48"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	915019	915471	1000	+	.	transcript_id "51.T48";
chr1	Cufflinks	transcript	915030	920089	1000	+	.	expr "5.1723981521"; transcript_id "43.T34"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	915030	915471	1000	+	.	transcript_id "43.T34";
chr1	Cufflinks	transcript	915034	920091	1000	+	.	expr "1.0605787223"; transcript_id "49.T30"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	915034	915471	1000	+	.	transcript_id "49.T30";
chr1	Cufflinks	transcript	915062	921796	979	+	.	expr "0.2685780290"; transcript_id "50.T43"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	915062	915471	979	+	.	transcript_id "50.T43";
chr1	Cufflinks	exon	915168	915471	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	915175	915475	1000	+	.	transcript_id "11.T14";
chr1	Cufflinks	exon	915197	915235	1000	+	.	transcript_id "50.T42";
chr1	Cufflinks	exon	915197	915235	748	+	.	transcript_id "50.T41";
chr1	Cufflinks	exon	915319	915471	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	915319	915471	1000	+	.	transcript_id "32.T47";
chr1	Cufflinks	exon	915319	915471	1000	+	.	transcript_id "42.T28";
chr1	Cufflinks	exon	915319	915471	1000	+	.	transcript_id "50.T42";
chr1	Cufflinks	exon	915319	915471	748	+	.	transcript_id "50.T41";
chr1	Cufflinks	exon	915319	915471	957	+	.	transcript_id "27.T44";
chr1	Cufflinks	exon	915319	915471	991	+	.	transcript_id "10.T31";
chr1	Cufflinks	transcript	915747	923861	667	-	.	expr "1.5436887631"; transcript_id "34.T29"; ref "0"; sample_id "34";
chr1	Cufflinks	transcript	915747	925305	1000	-	.	expr "2.3121750124"; transcript_id "34.T30"; ref "0"; sample_id "34";
chr1	Cufflinks	exon	915747	923143	1000	-	.	transcript_id "34.T30";
chr1	Cufflinks	exon	915747	923143	667	-	.	transcript_id "34.T29";
chr1	Cufflinks	transcript	915749	916421	1000	.	.	expr "0.3350604387"; transcript_id "52.T35"; ref "0"; sample_id "52";
chr1	Cufflinks	transcript	915749	923441	1000	.	.	expr "1.9143554179"; transcript_id "8.T46"; ref "0"; sample_id "8";
chr1	Cufflinks	transcript	915749	923880	1000	+	.	expr "5.1459250274"; transcript_id "46.T42"; ref "0"; sample_id "46";
chr1	Cufflinks	transcript	915749	932253	1000	-	.	expr "7.2042117708"; transcript_id "47.T94"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	915749	916421	1000	.	.	transcript_id "52.T35";
chr1	Cufflinks	exon	915749	916433	1000	+	.	transcript_id "46.T42";
chr1	Cufflinks	exon	915749	923441	1000	.	.	transcript_id "8.T46";
chr1	Cufflinks	exon	915749	923461	1000	-	.	transcript_id "47.T94";
chr1	Cufflinks	exon	915750	915879	850	+	.	transcript_id "27.T43";
chr1	Cufflinks	exon	915750	915949	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	915750	915949	750	+	.	transcript_id "43.T32";
chr1	Cufflinks	exon	915750	915953	1000	+	.	transcript_id "17.T33";
chr1	Cufflinks	exon	915750	916433	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	915750	916433	979	+	.	transcript_id "50.T43";
chr1	Cufflinks	exon	915750	916942	1000	+	.	transcript_id "55.T33";
chr1	Cufflinks	exon	915750	917038	639	+	.	transcript_id "14.T18";
chr1	Cufflinks	exon	915750	918071	1000	+	.	transcript_id "27.T42";
chr1	Cufflinks	exon	915750	918071	533	+	.	transcript_id "42.T29";
chr1	Cufflinks	exon	915750	918071	957	+	.	transcript_id "27.T44";
chr1	Cufflinks	exon	915750	920089	1000	+	.	transcript_id "43.T34";
chr1	Cufflinks	exon	915750	920091	1000	+	.	transcript_id "49.T30";
chr1	Cufflinks	exon	915750	920320	1000	+	.	transcript_id "13.T46";
chr1	Cufflinks	exon	915750	921257	1000	+	.	transcript_id "51.T48";
chr1	Cufflinks	exon	915750	921796	1000	+	.	transcript_id "50.T42";
chr1	Cufflinks	exon	915750	921796	748	+	.	transcript_id "50.T41";
chr1	Cufflinks	exon	915750	921918	1000	+	.	transcript_id "32.T47";
chr1	Cufflinks	exon	915750	923473	1000	+	.	transcript_id "4.T54";
chr1	Cufflinks	exon	915750	923732	1000	+	.	transcript_id "10.T30";
chr1	Cufflinks	exon	915750	923732	991	+	.	transcript_id "10.T31";
chr1	Cufflinks	exon	915750	923866	1000	+	.	transcript_id "42.T28";
chr1	Cufflinks	exon	915750	924948	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	915750	924948	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	915750	924948	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	915750	924948	407	+	.	transcript_id "43.T33";
chr1	HAVANA	exon	915750	915976	.	+	.	transcript_id "R.T144";
chr1	Cufflinks	transcript	915800	921257	293	+	.	expr "0.1036396822"; transcript_id "51.T49"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	915800	915949	293	+	.	transcript_id "51.T49";
chr1	Cufflinks	transcript	915953	943943	1000	+	.	expr "5.5124229856"; transcript_id "40.T30"; ref "0"; sample_id "40";
chr1	Cufflinks	exon	915953	924948	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	916317	916433	1000	+	.	transcript_id "17.T33";
chr1	Cufflinks	exon	916317	916433	293	+	.	transcript_id "51.T49";
chr1	Cufflinks	exon	916317	918071	850	+	.	transcript_id "27.T43";
chr1	Cufflinks	transcript	916375	923726	1000	.	.	expr "1.8892522916"; transcript_id "30.T16"; ref "0"; sample_id "30";
chr1	Cufflinks	exon	916375	923726	1000	.	.	transcript_id "30.T16";
chr1	Cufflinks	transcript	916419	944091	1000	+	.	expr "7.2114697225"; transcript_id "21.T38"; ref "0"; sample_id "21";
chr1	Cufflinks	exon	916419	924948	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	transcript	916493	923669	1000	.	.	expr "0.4668999201"; transcript_id "52.T42"; ref "0"; sample_id "52";
chr1	Cufflinks	transcript	916493	923669	505	-	.	expr "0.1666362135"; transcript_id "52.T43"; ref "0"; sample_id "52";
chr1	Cufflinks	transcript	916493	923669	724	-	.	expr "0.2388593474"; transcript_id "52.T44"; ref "0"; sample_id "52";
chr1	Cufflinks	transcript	916493	925215	1000	-	.	expr "0.3299105297"; transcript_id "52.T45"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	916493	922729	724	-	.	transcript_id "52.T44";
chr1	Cufflinks	exon	916493	923143	1000	-	.	transcript_id "52.T45";
chr1	Cufflinks	exon	916493	923143	505	-	.	transcript_id "52.T43";
chr1	Cufflinks	exon	916493	923669	1000	.	.	transcript_id "52.T42";
chr1	Cufflinks	exon	916529	918071	979	+	.	transcript_id "50.T43";
chr1	Cufflinks	exon	916529	923880	1000	+	.	transcript_id "46.T42";
chr1	Cufflinks	transcript	916689	923714	1000	.	.	expr "0.5401890241"; transcript_id "45.T28"; ref "0"; sample_id "45";
chr1	Cufflinks	exon	916689	923714	1000	.	.	transcript_id "45.T28";
chr1	Cufflinks	transcript	916735	918193	1000	.	.	expr "0.2485233526"; transcript_id "41.T31"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	916735	918193	1000	.	.	transcript_id "41.T31";
chr1	Cufflinks	exon	916749	920640	1000	+	.	transcript_id "17.T33";
chr1	Cufflinks	transcript	916817	921307	1000	-	.	expr "3.7425833307"; transcript_id "16.T92"; ref "0"; sample_id "16";
chr1	Cufflinks	transcript	916817	923676	1000	.	.	expr "4.3503357720"; transcript_id "16.T93"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	916817	918175	1000	-	.	transcript_id "16.T92";
chr1	Cufflinks	exon	916817	923676	1000	.	.	transcript_id "16.T93";
chr1	Cufflinks	transcript	916842	922435	1000	.	.	expr "1.0165340334"; transcript_id "37.T12"; ref "0"; sample_id "37";
chr1	Cufflinks	exon	916842	922435	1000	.	.	transcript_id "37.T12";
chr1	HAVANA	transcript	916865	921016	.	-	.	expr "0.0"; transcript_id "R.T147"; ref "1"; sample_id "R";
chr1	HAVANA	exon	916865	921016	.	-	.	transcript_id "R.T147";
chr1	HAVANA	transcript	916870	919692	.	-	.	expr "0.0"; transcript_id "R.T148"; ref "1"; sample_id "R";
chr1	HAVANA	exon	916870	917720	.	-	.	transcript_id "R.T148";
chr1	Cufflinks	transcript	916873	923871	1000	.	.	expr "7.5051027574"; transcript_id "9.T26"; ref "0"; sample_id "9";
chr1	Cufflinks	exon	916873	923871	1000	.	.	transcript_id "9.T26";
chr1	Cufflinks	transcript	916874	918082	1000	.	.	expr "0.2753194745"; transcript_id "24.T35"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	916874	918082	1000	.	.	transcript_id "24.T35";
chr1	Cufflinks	transcript	916912	923162	1000	-	.	expr "0.4225530004"; transcript_id "3.T30"; ref "0"; sample_id "3";
chr1	Cufflinks	transcript	916912	923677	1000	.	.	expr "0.2861615015"; transcript_id "3.T32"; ref "0"; sample_id "3";
chr1	Cufflinks	transcript	916912	925744	274	-	.	expr "0.1158201396"; transcript_id "3.T31"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	916912	922509	1000	-	.	transcript_id "3.T30";
chr1	Cufflinks	exon	916912	922509	274	-	.	transcript_id "3.T31";
chr1	Cufflinks	exon	916912	923677	1000	.	.	transcript_id "3.T32";
chr1	Cufflinks	transcript	917012	918126	1000	.	.	expr "0.2581607964"; transcript_id "55.T36"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	917012	918126	1000	.	.	transcript_id "55.T36";
chr1	Cufflinks	transcript	917021	923385	1000	-	.	expr "3.5264680312"; transcript_id "48.T51"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	917021	922509	1000	-	.	transcript_id "48.T51";
chr1	Cufflinks	transcript	917026	925340	1000	-	.	expr "5.7369642789"; transcript_id "38.T37"; ref "0"; sample_id "38";
chr1	Cufflinks	transcript	917026	933991	404	-	.	expr "2.3200229619"; transcript_id "38.T38"; ref "0"; sample_id "38";
chr1	Cufflinks	exon	917026	918915	1000	-	.	transcript_id "38.T37";
chr1	Cufflinks	exon	917026	922849	404	-	.	transcript_id "38.T38";
chr1	Cufflinks	transcript	917230	933984	1000	-	.	expr "3.3581590947"; transcript_id "21.T39"; ref "0"; sample_id "21";
chr1	Cufflinks	exon	917230	922509	1000	-	.	transcript_id "21.T39";
chr1	Cufflinks	transcript	917262	918521	1000	.	.	expr "0.1342807274"; transcript_id "14.T15"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	917262	918521	1000	.	.	transcript_id "14.T15";
chr1	Cufflinks	transcript	917363	918140	1000	.	.	expr "0.3326736578"; transcript_id "23.T21"; ref "0"; sample_id "23";
chr1	Cufflinks	exon	917363	918140	1000	.	.	transcript_id "23.T21";
chr1	HAVANA	transcript	917370	918534	.	-	.	expr "0.0"; transcript_id "R.T149"; ref "1"; sample_id "R";
chr1	HAVANA	exon	917370	917486	.	-	.	transcript_id "R.T149";
chr1	Cufflinks	transcript	917533	923209	1000	-	.	expr "1.1758078036"; transcript_id "4.T55"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	917533	922510	1000	-	.	transcript_id "4.T55";
chr1	Cufflinks	transcript	917569	918572	1000	.	.	expr "0.3612639168"; transcript_id "26.T37"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	917569	918572	1000	.	.	transcript_id "26.T37";
chr1	Cufflinks	transcript	917710	933965	1000	-	.	expr "1.1435913074"; transcript_id "31.T43"; ref "0"; sample_id "31";
chr1	Cufflinks	exon	917710	917720	1000	-	.	transcript_id "31.T43";
chr1	Cufflinks	exon	917882	920081	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	917882	921257	293	+	.	transcript_id "51.T49";
chr1	Cufflinks	exon	917882	924948	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	917882	924948	750	+	.	transcript_id "43.T32";
chr1	Cufflinks	exon	918022	918175	902	-	.	transcript_id "49.T28";
chr1	Cufflinks	exon	918022	922509	1000	-	.	transcript_id "31.T43";
chr1	HAVANA	exon	918022	918110	.	-	.	transcript_id "R.T148";
chr1	HAVANA	exon	918022	918534	.	-	.	transcript_id "R.T149";
chr1	Cufflinks	exon	918024	922509	1000	-	.	transcript_id "27.T45";
chr1	Cufflinks	transcript	918036	933988	1000	-	.	expr "3.0604978187"; transcript_id "40.T31"; ref "0"; sample_id "40";
chr1	Cufflinks	exon	918036	918915	1000	-	.	transcript_id "40.T31";
chr1	Cufflinks	transcript	918200	919327	1000	.	.	expr "0.2375493162"; transcript_id "55.T37"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	918200	919327	1000	.	.	transcript_id "55.T37";
chr1	Cufflinks	transcript	918301	919188	1000	.	.	expr "0.2563134357"; transcript_id "41.T32"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	918301	919188	1000	.	.	transcript_id "41.T32";
chr1	Cufflinks	transcript	918344	933928	1000	-	.	expr "2.0463900045"; transcript_id "43.T36"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	918344	922714	1000	-	.	transcript_id "43.T36";
chr1	Cufflinks	transcript	918729	920791	1000	.	.	expr "0.2310299284"; transcript_id "11.T15"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	918729	920791	1000	.	.	transcript_id "11.T15";
chr1	Cufflinks	exon	918825	918915	902	-	.	transcript_id "49.T28";
chr1	Cufflinks	exon	918825	921307	1000	-	.	transcript_id "16.T92";
chr1	Cufflinks	exon	918825	922515	1000	-	.	transcript_id "49.T29";
chr1	HAVANA	exon	918825	918915	.	-	.	transcript_id "R.T148";
chr1	Cufflinks	transcript	918836	922253	1000	.	.	expr "0.1729345213"; transcript_id "39.T27"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	918836	922253	1000	.	.	transcript_id "39.T27";
chr1	Cufflinks	transcript	918928	933968	1000	-	.	expr "2.5025361094"; transcript_id "17.T34"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	918928	922509	1000	-	.	transcript_id "17.T34";
chr1	Cufflinks	transcript	919103	920499	1000	+	.	expr "0.2778418047"; transcript_id "24.T36"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	919103	920081	1000	+	.	transcript_id "24.T36";
chr1	Cufflinks	transcript	919273	921499	1000	.	.	expr "0.3470899732"; transcript_id "26.T40"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	919273	921499	1000	.	.	transcript_id "26.T40";
chr1	Cufflinks	transcript	919289	921226	1000	.	.	expr "0.2443223507"; transcript_id "41.T33"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	919289	921226	1000	.	.	transcript_id "41.T33";
chr1	Cufflinks	exon	919335	923012	902	-	.	transcript_id "49.T28";
chr1	Cufflinks	exon	919335	923143	1000	-	.	transcript_id "38.T37";
chr1	Cufflinks	exon	919335	923143	1000	-	.	transcript_id "40.T31";
chr1	HAVANA	exon	919335	919692	.	-	.	transcript_id "R.T148";
chr1	Cufflinks	transcript	919485	925951	1000	+	.	expr "11.5401163578"; transcript_id "20.T43"; ref "0"; sample_id "20";
chr1	Cufflinks	exon	919485	924948	1000	+	.	transcript_id "20.T43";
chr1	Cufflinks	exon	919970	920081	533	+	.	transcript_id "42.T29";
chr1	Cufflinks	exon	919970	920081	957	+	.	transcript_id "27.T44";
chr1	Cufflinks	exon	919970	920081	979	+	.	transcript_id "50.T43";
chr1	Cufflinks	exon	919970	922059	1000	+	.	transcript_id "27.T42";
chr1	Cufflinks	exon	919970	922059	850	+	.	transcript_id "27.T43";
chr1	Cufflinks	transcript	920139	921161	1000	.	.	expr "0.2872645322"; transcript_id "55.T42"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	920139	921161	1000	.	.	transcript_id "55.T42";
chr1	Cufflinks	exon	920221	920499	1000	+	.	transcript_id "24.T36";
chr1	Cufflinks	exon	920221	921796	979	+	.	transcript_id "50.T43";
chr1	Cufflinks	exon	920221	922059	957	+	.	transcript_id "27.T44";
chr1	Cufflinks	exon	920221	923866	533	+	.	transcript_id "42.T29";
chr1	Cufflinks	exon	920221	924948	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	transcript	920326	920933	1000	.	.	expr "0.4733672296"; transcript_id "14.T16"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	920326	920933	1000	.	.	transcript_id "14.T16";
chr1	Cufflinks	transcript	921339	922106	1000	.	.	expr "0.2973142432"; transcript_id "11.T16"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	921339	922106	1000	.	.	transcript_id "11.T16";
chr1	Cufflinks	transcript	921430	922220	1000	.	.	expr "0.3098851736"; transcript_id "14.T28"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	921430	922220	1000	.	.	transcript_id "14.T28";
chr1	Cufflinks	transcript	921550	923104	1000	-	.	expr "0.3734387757"; transcript_id "26.T41"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	921550	922509	1000	-	.	transcript_id "26.T41";
chr1	Cufflinks	transcript	921891	922736	1000	.	.	expr "0.2146800852"; transcript_id "41.T34"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	921891	922736	1000	.	.	transcript_id "41.T34";
chr1	Cufflinks	transcript	922026	923751	1000	-	.	expr "0.4270692229"; transcript_id "50.T35"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	922026	922509	1000	-	.	transcript_id "50.T35";
chr1	Cufflinks	transcript	922523	934005	358	-	.	expr "1.2631533073"; transcript_id "48.T52"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	922523	922735	358	-	.	transcript_id "48.T52";
chr1	Cufflinks	transcript	922524	924960	1000	-	.	expr "0.1866572241"; transcript_id "24.T38"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	922524	923463	1000	-	.	transcript_id "24.T38";
chr1	Cufflinks	exon	922611	923143	274	-	.	transcript_id "3.T31";
chr1	Cufflinks	exon	922611	923461	1000	-	.	transcript_id "46.T41";
chr1	Cufflinks	transcript	922612	933984	1000	-	.	expr "2.3934730908"; transcript_id "29.T28"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	922612	923143	1000	-	.	transcript_id "29.T28";
chr1	Cufflinks	exon	922672	922714	1000	-	.	transcript_id "13.T45";
chr1	Cufflinks	exon	922672	922714	1000	-	.	transcript_id "26.T41";
chr1	Cufflinks	exon	922672	922990	1000	-	.	transcript_id "27.T45";
chr1	Cufflinks	exon	923013	923104	1000	-	.	transcript_id "26.T41";
chr1	Cufflinks	exon	923013	923143	1000	-	.	transcript_id "13.T45";
chr1	Cufflinks	exon	923013	923143	1000	-	.	transcript_id "17.T34";
chr1	Cufflinks	exon	923013	923143	1000	-	.	transcript_id "21.T39";
chr1	Cufflinks	exon	923013	923143	1000	-	.	transcript_id "31.T43";
chr1	Cufflinks	exon	923013	923143	1000	-	.	transcript_id "43.T36";
chr1	Cufflinks	exon	923013	923143	1000	-	.	transcript_id "48.T51";
chr1	Cufflinks	exon	923013	923143	1000	-	.	transcript_id "7.T30";
chr1	Cufflinks	exon	923013	923143	358	-	.	transcript_id "48.T52";
chr1	Cufflinks	exon	923013	923143	404	-	.	transcript_id "38.T38";
chr1	Cufflinks	exon	923013	923145	1000	-	.	transcript_id "50.T35";
chr1	Cufflinks	exon	923013	923866	1000	-	.	transcript_id "42.T30";
chr1	Cufflinks	exon	923019	923138	1000	-	.	transcript_id "49.T29";
chr1	Cufflinks	exon	923028	923143	724	-	.	transcript_id "52.T44";
chr1	Cufflinks	transcript	923117	933926	1000	-	.	expr "1.9606657208"; transcript_id "8.T47"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	923117	923461	1000	-	.	transcript_id "8.T47";
chr1	Cufflinks	exon	923144	923162	1000	-	.	transcript_id "3.T30";
chr1	Cufflinks	exon	923145	923209	1000	-	.	transcript_id "4.T55";
chr1	Cufflinks	exon	923254	923461	1000	-	.	transcript_id "38.T37";
chr1	Cufflinks	exon	923254	923461	1000	-	.	transcript_id "52.T45";
chr1	Cufflinks	exon	923254	923461	1000	-	.	transcript_id "7.T30";
chr1	Cufflinks	exon	923254	923669	724	-	.	transcript_id "52.T44";
chr1	Cufflinks	transcript	923259	933995	956	-	.	expr "2.2116186906"; transcript_id "34.T31"; ref "0"; sample_id "34";
chr1	Cufflinks	exon	923259	923461	956	-	.	transcript_id "34.T31";
chr1	Cufflinks	exon	923272	923461	1000	-	.	transcript_id "43.T36";
chr1	Cufflinks	exon	923275	923385	1000	-	.	transcript_id "48.T51";
chr1	Cufflinks	exon	923275	923461	1000	-	.	transcript_id "13.T45";
chr1	Cufflinks	exon	923275	923461	1000	-	.	transcript_id "21.T39";
chr1	Cufflinks	exon	923275	923751	1000	-	.	transcript_id "50.T35";
chr1	Cufflinks	exon	923275	923861	667	-	.	transcript_id "34.T29";
chr1	Cufflinks	exon	923397	923461	1000	-	.	transcript_id "17.T34";
chr1	Cufflinks	exon	923397	923461	1000	-	.	transcript_id "29.T28";
chr1	Cufflinks	exon	923397	923461	1000	-	.	transcript_id "31.T43";
chr1	Cufflinks	exon	923397	923461	1000	-	.	transcript_id "34.T30";
chr1	Cufflinks	exon	923397	923461	1000	-	.	transcript_id "40.T31";
chr1	Cufflinks	exon	923397	923461	274	-	.	transcript_id "3.T31";
chr1	Cufflinks	exon	923397	923461	358	-	.	transcript_id "48.T52";
chr1	Cufflinks	exon	923397	923461	404	-	.	transcript_id "38.T38";
chr1	Cufflinks	exon	923397	923669	505	-	.	transcript_id "52.T43";
chr1	Cufflinks	exon	923616	923827	1000	-	.	transcript_id "7.T30";
chr1	Cufflinks	transcript	923694	942611	598	+	.	expr "1.8331434999"; transcript_id "4.T49"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	923694	924948	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	transcript	923953	944091	1000	+	.	expr "1.5731507128"; transcript_id "30.T24"; ref "0"; sample_id "30";
chr1	Cufflinks	transcript	923953	944091	931	+	.	expr "1.4655231450"; transcript_id "30.T23"; ref "0"; sample_id "30";
chr1	Cufflinks	exon	923953	924948	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	923953	924948	931	+	.	transcript_id "30.T23";
chr1	Cufflinks	transcript	924079	942678	1000	+	.	expr "0.7538527774"; transcript_id "3.T33"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	924079	924948	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	transcript	924081	924551	1000	.	.	expr "1.5082956775"; transcript_id "16.T90"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	924081	924551	1000	.	.	transcript_id "16.T90";
chr1	Cufflinks	transcript	924617	944001	1000	+	.	expr "13.6553369257"; transcript_id "8.T48"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	924617	924948	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	924651	924960	1000	-	.	transcript_id "24.T38";
chr1	Cufflinks	exon	924651	925215	1000	-	.	transcript_id "52.T45";
chr1	Cufflinks	exon	924651	925305	1000	-	.	transcript_id "34.T30";
chr1	Cufflinks	exon	924651	925340	1000	-	.	transcript_id "38.T37";
chr1	Cufflinks	exon	924651	925744	274	-	.	transcript_id "3.T31";
chr1	Cufflinks	exon	924651	932253	1000	-	.	transcript_id "47.T94";
chr1	Cufflinks	exon	924651	933723	1000	-	.	transcript_id "13.T45";
chr1	Cufflinks	exon	924651	933926	1000	-	.	transcript_id "8.T47";
chr1	Cufflinks	exon	924651	933965	1000	-	.	transcript_id "31.T43";
chr1	Cufflinks	exon	924651	933984	1000	-	.	transcript_id "29.T28";
chr1	Cufflinks	exon	924651	934017	1000	-	.	transcript_id "46.T41";
chr1	Cufflinks	transcript	924652	944027	1000	+	.	expr "3.0636378596"; transcript_id "4.T50"; ref "0"; sample_id "4";
chr1	Cufflinks	transcript	924652	944027	537	+	.	expr "1.6458177072"; transcript_id "4.T51"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	924652	924948	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	924652	924948	537	+	.	transcript_id "4.T51";
chr1	HAVANA	transcript	924880	939291	.	+	.	expr "0.0"; transcript_id "R.T150"; ref "1"; sample_id "R";
chr1	HAVANA	exon	924880	924948	.	+	.	transcript_id "R.T150";
chr1	HAVANA	transcript	925150	935793	.	+	.	expr "0.0"; transcript_id "R.T151"; ref "1"; sample_id "R";
chr1	HAVANA	exon	925150	925189	.	+	.	transcript_id "R.T151";
chr1	Cufflinks	transcript	925366	932091	1000	.	.	expr "0.5822922920"; transcript_id "4.T52"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	925366	932091	1000	.	.	transcript_id "4.T52";
chr1	Cufflinks	transcript	925476	928159	1000	.	.	expr "4.3493472584"; transcript_id "16.T91"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	925476	928159	1000	.	.	transcript_id "16.T91";
chr1	Cufflinks	exon	925518	933928	1000	-	.	transcript_id "43.T36";
chr1	Cufflinks	exon	925518	933968	1000	-	.	transcript_id "17.T34";
chr1	Cufflinks	exon	925518	933984	1000	-	.	transcript_id "21.T39";
chr1	Cufflinks	exon	925518	933988	1000	-	.	transcript_id "40.T31";
chr1	Cufflinks	exon	925518	933991	404	-	.	transcript_id "38.T38";
chr1	Cufflinks	exon	925518	933995	956	-	.	transcript_id "34.T31";
chr1	Cufflinks	exon	925518	934005	358	-	.	transcript_id "48.T52";
chr1	HAVANA	transcript	925738	944575	.	+	.	expr "0.0"; transcript_id "R.T152"; ref "1"; sample_id "R";
chr1	HAVANA	exon	925738	925800	.	+	.	transcript_id "R.T152";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T153"; ref "1"; sample_id "R";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T154"; ref "1"; sample_id "R";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T155"; ref "1"; sample_id "R";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T156"; ref "1"; sample_id "R";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T157"; ref "1"; sample_id "R";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T158"; ref "1"; sample_id "R";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T159"; ref "1"; sample_id "R";
chr1	ENSEMBL	transcript	925741	944581	.	+	.	expr "0.0"; transcript_id "R.T160"; ref "1"; sample_id "R";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	925741	925800	.	+	.	transcript_id "R.T160";
chr1	Cufflinks	transcript	925843	930336	1000	.	.	expr "0.3072358558"; transcript_id "45.T29"; ref "0"; sample_id "45";
chr1	Cufflinks	exon	925843	930336	1000	.	.	transcript_id "45.T29";
chr1	Cufflinks	transcript	925851	931045	755	+	.	expr "1.6177434314"; transcript_id "31.T42"; ref "0"; sample_id "31";
chr1	Cufflinks	exon	925851	930336	755	+	.	transcript_id "31.T42";
chr1	Cufflinks	exon	925922	925951	1000	+	.	transcript_id "20.T43";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	925922	926013	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	925922	926013	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	925922	926013	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	925922	926013	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	925922	926013	750	+	.	transcript_id "43.T32";
chr1	Cufflinks	exon	925922	926013	931	+	.	transcript_id "30.T23";
chr1	Cufflinks	exon	925922	928751	407	+	.	transcript_id "43.T33";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	925922	926013	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	925922	926013	.	+	.	transcript_id "R.T150";
chr1	HAVANA	exon	925922	926013	.	+	.	transcript_id "R.T151";
chr1	HAVANA	exon	925922	926013	.	+	.	transcript_id "R.T152";
chr1	Cufflinks	transcript	926170	926846	1000	.	.	expr "0.6021125152"; transcript_id "3.T34"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	926170	926846	1000	.	.	transcript_id "3.T34";
chr1	Cufflinks	transcript	926417	927191	1000	.	.	expr "0.2959924258"; transcript_id "18.T34"; ref "0"; sample_id "18";
chr1	Cufflinks	exon	926417	927191	1000	.	.	transcript_id "18.T34";
chr1	Cufflinks	transcript	926716	928584	1000	.	.	expr "0.1867058090"; transcript_id "37.T11"; ref "0"; sample_id "37";
chr1	Cufflinks	exon	926716	928584	1000	.	.	transcript_id "37.T11";
chr1	Cufflinks	transcript	926751	927346	1000	.	.	expr "0.4311259404"; transcript_id "11.T17"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	926751	927346	1000	.	.	transcript_id "11.T17";
chr1	Cufflinks	transcript	926849	928102	1000	.	.	expr "0.4424327210"; transcript_id "28.T27"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	926849	928102	1000	.	.	transcript_id "28.T27";
chr1	Cufflinks	transcript	927338	928761	1000	.	.	expr "0.2619898425"; transcript_id "3.T35"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	927338	928761	1000	.	.	transcript_id "3.T35";
chr1	Cufflinks	transcript	927537	928325	1000	.	.	expr "0.3150629151"; transcript_id "11.T18"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	927537	928325	1000	.	.	transcript_id "11.T18";
chr1	Cufflinks	transcript	927650	929247	1000	.	.	expr "0.2162111299"; transcript_id "51.T47"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	927650	929247	1000	.	.	transcript_id "51.T47";
chr1	Cufflinks	transcript	928265	928767	1000	.	.	expr "0.7092534587"; transcript_id "52.T41"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	928265	928767	1000	.	.	transcript_id "52.T41";
chr1	Cufflinks	transcript	928825	944063	685	+	.	expr "6.9065997085"; transcript_id "16.T94"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	928825	930336	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	transcript	928855	929817	1000	.	.	expr "0.3225771396"; transcript_id "26.T42"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	928855	929817	1000	.	.	transcript_id "26.T42";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	930155	930336	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	930155	930336	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	930155	930336	407	+	.	transcript_id "43.T33";
chr1	Cufflinks	exon	930155	930336	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	930155	930336	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	930155	930336	750	+	.	transcript_id "43.T32";
chr1	Cufflinks	exon	930155	930336	931	+	.	transcript_id "30.T23";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	930155	930336	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	930155	930336	.	+	.	transcript_id "R.T150";
chr1	HAVANA	exon	930155	930336	.	+	.	transcript_id "R.T151";
chr1	HAVANA	exon	930155	930336	.	+	.	transcript_id "R.T152";
chr1	HAVANA	transcript	930312	944575	.	+	.	expr "0.0"; transcript_id "R.T161"; ref "1"; sample_id "R";
chr1	HAVANA	exon	930312	930336	.	+	.	transcript_id "R.T161";
chr1	Cufflinks	exon	931039	931045	755	+	.	transcript_id "31.T42";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	931039	931089	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	931039	931089	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	931039	931089	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	931039	931089	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	931039	931089	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	exon	931039	931089	750	+	.	transcript_id "43.T32";
chr1	Cufflinks	exon	931039	931089	931	+	.	transcript_id "30.T23";
chr1	Cufflinks	exon	931039	932076	407	+	.	transcript_id "43.T33";
chr1	ENSEMBL	exon	931039	931089	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	931039	931089	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	931039	931089	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	931039	931089	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	931039	931089	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	931039	931089	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	931039	931089	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	931039	931089	.	+	.	transcript_id "R.T150";
chr1	HAVANA	exon	931039	931089	.	+	.	transcript_id "R.T151";
chr1	HAVANA	exon	931039	931089	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	931039	931089	.	+	.	transcript_id "R.T161";
chr1	Cufflinks	transcript	931108	932076	1000	.	.	expr "0.5137344318"; transcript_id "30.T25"; ref "0"; sample_id "30";
chr1	Cufflinks	exon	931108	932076	1000	.	.	transcript_id "30.T25";
chr1	Cufflinks	transcript	931162	932066	1000	.	.	expr "13.6188503701"; transcript_id "16.T96"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	931162	932066	1000	.	.	transcript_id "16.T96";
chr1	Cufflinks	transcript	931179	932043	1000	.	.	expr "0.7003344625"; transcript_id "5.T35"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	931179	932043	1000	.	.	transcript_id "5.T35";
chr1	Cufflinks	transcript	931208	932187	1000	.	.	expr "0.3146106568"; transcript_id "42.T19"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	931208	932187	1000	.	.	transcript_id "42.T19";
chr1	Cufflinks	transcript	931221	932033	1000	.	.	expr "0.2264209901"; transcript_id "41.T35"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	931221	932033	1000	.	.	transcript_id "41.T35";
chr1	Cufflinks	transcript	931222	932045	1000	.	.	expr "0.4139605152"; transcript_id "51.T50"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	931222	932045	1000	.	.	transcript_id "51.T50";
chr1	Cufflinks	transcript	931269	932005	1000	.	.	expr "0.2552547289"; transcript_id "3.T36"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	931269	932005	1000	.	.	transcript_id "3.T36";
chr1	Cufflinks	transcript	931275	932013	1000	.	.	expr "0.4732916056"; transcript_id "27.T38"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	931275	932013	1000	.	.	transcript_id "27.T38";
chr1	Cufflinks	transcript	932216	933374	1000	.	.	expr "0.3984431557"; transcript_id "5.T36"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	932216	933374	1000	.	.	transcript_id "5.T36";
chr1	Cufflinks	transcript	932250	933973	1000	.	.	expr "0.5496256817"; transcript_id "7.T28"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	932250	933973	1000	.	.	transcript_id "7.T28";
chr1	Cufflinks	transcript	932263	932424	1000	.	.	expr "18.9985922591"; transcript_id "16.T97"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	932263	932424	1000	.	.	transcript_id "16.T97";
chr1	Cufflinks	transcript	932363	933991	1000	.	.	expr "0.6770903575"; transcript_id "35.T25"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	932363	933991	1000	.	.	transcript_id "35.T25";
chr1	Cufflinks	transcript	932464	933094	1000	.	.	expr "0.3884895740"; transcript_id "25.T35"; ref "0"; sample_id "25";
chr1	Cufflinks	exon	932464	933094	1000	.	.	transcript_id "25.T35";
chr1	Cufflinks	transcript	932490	933282	1000	.	.	expr "0.2584744301"; transcript_id "50.T36"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	932490	933282	1000	.	.	transcript_id "50.T36";
chr1	Cufflinks	transcript	932498	933992	1000	.	.	expr "0.2264637625"; transcript_id "49.T27"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	932498	933992	1000	.	.	transcript_id "49.T27";
chr1	Cufflinks	transcript	932524	933670	1000	.	.	expr "3.5539907703"; transcript_id "47.T90"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	932524	933670	1000	.	.	transcript_id "47.T90";
chr1	Cufflinks	transcript	932527	933566	1000	.	.	expr "0.2207293606"; transcript_id "12.T26"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	932527	933566	1000	.	.	transcript_id "12.T26";
chr1	Cufflinks	transcript	932533	932877	1000	.	.	expr "0.8084065240"; transcript_id "2.T32"; ref "0"; sample_id "2";
chr1	Cufflinks	exon	932533	932877	1000	.	.	transcript_id "2.T32";
chr1	Cufflinks	transcript	932837	933965	339	.	.	expr "1.8940721453"; transcript_id "16.T98"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	932837	933965	339	.	.	transcript_id "16.T98";
chr1	Cufflinks	transcript	932887	933794	1000	.	.	expr "0.1558791590"; transcript_id "1.T36"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	932887	933794	1000	.	.	transcript_id "1.T36";
chr1	Cufflinks	transcript	932978	933728	1000	.	.	expr "0.2858505218"; transcript_id "2.T33"; ref "0"; sample_id "2";
chr1	Cufflinks	exon	932978	933728	1000	.	.	transcript_id "2.T33";
chr1	Cufflinks	transcript	933208	933759	1000	.	.	expr "0.3576795314"; transcript_id "19.T21"; ref "0"; sample_id "19";
chr1	Cufflinks	exon	933208	933759	1000	.	.	transcript_id "19.T21";
chr1	Cufflinks	transcript	933403	933739	1000	.	.	expr "5.5740094380"; transcript_id "16.T99"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	933403	933739	1000	.	.	transcript_id "16.T99";
chr1	Cufflinks	transcript	934943	957589	176	-	.	expr "4.5813359889"; transcript_id "6.T51"; ref "0"; sample_id "6";
chr1	Cufflinks	transcript	934943	964599	147	-	.	expr "3.8225789159"; transcript_id "6.T52"; ref "0"; sample_id "6";
chr1	Cufflinks	exon	934943	944800	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	934943	944800	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	transcript	934959	959316	1000	-	.	expr "6.2927413390"; transcript_id "46.T53"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	934959	944800	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	transcript	935070	935309	1000	.	.	expr "6.1836456102"; transcript_id "47.T89"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	935070	935309	1000	.	.	transcript_id "47.T89";
chr1	Cufflinks	transcript	935473	944063	1000	+	.	expr "10.0754797286"; transcript_id "16.T95"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	935473	935896	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	935772	935888	750	+	.	transcript_id "43.T32";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	935772	935896	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	935772	935896	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	935772	935896	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	935772	935896	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	935772	935896	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	exon	935772	935896	931	+	.	transcript_id "30.T23";
chr1	ENSEMBL	exon	935772	935805	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	935772	935896	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	935772	935896	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	935772	935896	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	935772	935896	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	935772	935896	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	935772	935896	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	935772	935793	.	+	.	transcript_id "R.T151";
chr1	HAVANA	exon	935772	935896	.	+	.	transcript_id "R.T150";
chr1	HAVANA	exon	935772	935896	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	935772	935896	.	+	.	transcript_id "R.T161";
chr1	Cufflinks	transcript	936328	937786	1000	.	.	expr "0.2300808704"; transcript_id "7.T29"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	936328	937786	1000	.	.	transcript_id "7.T29";
chr1	Cufflinks	transcript	936331	937404	1000	.	.	expr "0.4245612998"; transcript_id "17.T28"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	936331	937404	1000	.	.	transcript_id "17.T28";
chr1	Cufflinks	transcript	936358	937565	1000	.	.	expr "0.2815100994"; transcript_id "38.T36"; ref "0"; sample_id "38";
chr1	Cufflinks	exon	936358	937565	1000	.	.	transcript_id "38.T36";
chr1	Cufflinks	transcript	936414	938072	1000	.	.	expr "0.1852814203"; transcript_id "36.T39"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	936414	938072	1000	.	.	transcript_id "36.T39";
chr1	Cufflinks	transcript	936472	938062	1000	.	.	expr "0.1348196374"; transcript_id "43.T31"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	936472	938062	1000	.	.	transcript_id "43.T31";
chr1	Cufflinks	transcript	936540	936803	1000	.	.	expr "6.4638245765"; transcript_id "47.T91"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	936540	936803	1000	.	.	transcript_id "47.T91";
chr1	Cufflinks	transcript	936839	938099	1000	.	.	expr "0.1729263081"; transcript_id "13.T44"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	936839	938099	1000	.	.	transcript_id "13.T44";
chr1	Cufflinks	transcript	937073	937529	1000	.	.	expr "1.7968302938"; transcript_id "47.T93"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	937073	937529	1000	.	.	transcript_id "47.T93";
chr1	Cufflinks	transcript	937553	937976	1000	.	.	expr "1.8926991640"; transcript_id "16.T100"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	937553	937976	1000	.	.	transcript_id "16.T100";
chr1	Cufflinks	transcript	937732	938945	1000	.	.	expr "0.5801557816"; transcript_id "35.T26"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	937732	938945	1000	.	.	transcript_id "35.T26";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	939040	939129	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	939040	939129	354	+	.	transcript_id "21.T37";
chr1	Cufflinks	exon	939040	939129	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	939040	939129	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	939040	939129	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	exon	939040	939129	931	+	.	transcript_id "30.T23";
chr1	ENSEMBL	exon	939040	939129	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	939040	939129	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	939040	939129	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	939040	939129	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	939040	939129	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	939040	939129	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	939040	939129	.	+	.	transcript_id "R.T150";
chr1	HAVANA	exon	939040	939129	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	939040	939129	.	+	.	transcript_id "R.T161";
chr1	Cufflinks	exon	939272	939412	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	939272	939412	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	exon	939272	939460	931	+	.	transcript_id "30.T23";
chr1	ENSEMBL	exon	939272	939412	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	939272	939412	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	939272	939460	.	+	.	transcript_id "R.T154";
chr1	HAVANA	transcript	939275	944259	.	+	.	expr "0.0"; transcript_id "R.T162"; ref "1"; sample_id "R";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	939275	939412	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	939275	939460	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	939275	939460	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	939275	939460	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	939275	940188	354	+	.	transcript_id "21.T37";
chr1	ENSEMBL	exon	939275	939412	.	+	.	transcript_id "R.T160";
chr1	ENSEMBL	exon	939275	939460	.	+	.	transcript_id "R.T156";
chr1	HAVANA	exon	939275	939291	.	+	.	transcript_id "R.T150";
chr1	HAVANA	exon	939275	939412	.	+	.	transcript_id "R.T161";
chr1	HAVANA	exon	939275	939460	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	939275	939460	.	+	.	transcript_id "R.T162";
chr1	Cufflinks	transcript	939722	940013	1000	.	.	expr "6.7624422198"; transcript_id "16.T101"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	939722	940013	1000	.	.	transcript_id "16.T101";
chr1	Cufflinks	transcript	940185	942460	1000	+	.	expr "0.6934963325"; transcript_id "24.T37"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	940185	940462	1000	+	.	transcript_id "24.T37";
chr1	HAVANA	transcript	940346	942173	.	+	.	expr "0.0"; transcript_id "R.T163"; ref "1"; sample_id "R";
chr1	HAVANA	exon	940346	940462	.	+	.	transcript_id "R.T163";
chr1	Cufflinks	transcript	940409	940874	1000	.	.	expr "1.3068058293"; transcript_id "35.T27"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	940409	940874	1000	.	.	transcript_id "35.T27";
chr1	Cufflinks	transcript	940515	940818	1000	.	.	expr "3.2827047854"; transcript_id "47.T92"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	940515	940818	1000	.	.	transcript_id "47.T92";
chr1	HAVANA	transcript	941076	942994	.	+	.	expr "0.0"; transcript_id "R.T164"; ref "1"; sample_id "R";
chr1	HAVANA	exon	941076	941306	.	+	.	transcript_id "R.T164";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "24.T37";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	941144	941306	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	941144	941306	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	941144	941306	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	941144	941306	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	exon	941144	941306	931	+	.	transcript_id "30.T23";
chr1	ENSEMBL	exon	941144	941230	.	+	.	transcript_id "R.T160";
chr1	ENSEMBL	exon	941144	941306	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	941144	941306	.	+	.	transcript_id "R.T157";
chr1	HAVANA	exon	941144	941306	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	941144	941306	.	+	.	transcript_id "R.T161";
chr1	HAVANA	exon	941144	941306	.	+	.	transcript_id "R.T162";
chr1	HAVANA	exon	941144	941306	.	+	.	transcript_id "R.T163";
chr1	ENSEMBL	exon	941172	941306	.	+	.	transcript_id "R.T155";
chr1	HAVANA	transcript	942103	942802	.	+	.	expr "0.0"; transcript_id "R.T165"; ref "1"; sample_id "R";
chr1	HAVANA	exon	942103	942251	.	+	.	transcript_id "R.T165";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "24.T37";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	942136	942251	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	942136	942251	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	942136	942251	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	942136	942251	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	exon	942136	942251	931	+	.	transcript_id "30.T23";
chr1	ENSEMBL	exon	942136	942251	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	942136	942251	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	942136	942251	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	942136	942251	.	+	.	transcript_id "R.T157";
chr1	HAVANA	exon	942136	942173	.	+	.	transcript_id "R.T163";
chr1	HAVANA	exon	942136	942251	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	942136	942251	.	+	.	transcript_id "R.T161";
chr1	HAVANA	exon	942136	942251	.	+	.	transcript_id "R.T162";
chr1	HAVANA	exon	942136	942251	.	+	.	transcript_id "R.T164";
chr1	HAVANA	transcript	942166	942892	.	+	.	expr "0.0"; transcript_id "R.T166"; ref "1"; sample_id "R";
chr1	HAVANA	exon	942166	942488	.	+	.	transcript_id "R.T166";
chr1	Cufflinks	exon	942410	942460	1000	+	.	transcript_id "24.T37";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	942410	942488	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	942410	942488	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	942410	942488	685	+	.	transcript_id "16.T94";
chr1	Cufflinks	exon	942410	942488	931	+	.	transcript_id "30.T23";
chr1	Cufflinks	exon	942410	942489	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	942410	943058	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	942410	943058	537	+	.	transcript_id "4.T51";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	942410	942488	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	942410	942488	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	942410	942488	.	+	.	transcript_id "R.T161";
chr1	HAVANA	exon	942410	942488	.	+	.	transcript_id "R.T162";
chr1	HAVANA	exon	942410	942488	.	+	.	transcript_id "R.T164";
chr1	HAVANA	exon	942410	942802	.	+	.	transcript_id "R.T165";
chr1	Cufflinks	exon	942559	942605	1000	+	.	transcript_id "29.T27";
chr1	Cufflinks	exon	942559	942611	598	+	.	transcript_id "4.T49";
chr1	Cufflinks	exon	942559	942659	1000	+	.	transcript_id "48.T50";
chr1	Cufflinks	exon	942559	942678	1000	+	.	transcript_id "3.T33";
chr1	Cufflinks	exon	942559	943058	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	942559	943058	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	942559	943058	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	942559	943058	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	942559	943058	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	942559	943058	931	+	.	transcript_id "30.T23";
chr1	Cufflinks	exon	942559	943377	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	942559	943377	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	942559	943377	685	+	.	transcript_id "16.T94";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	942559	943058	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	942559	942892	.	+	.	transcript_id "R.T166";
chr1	HAVANA	exon	942559	942994	.	+	.	transcript_id "R.T164";
chr1	HAVANA	exon	942559	943058	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	942559	943058	.	+	.	transcript_id "R.T161";
chr1	HAVANA	exon	942559	943058	.	+	.	transcript_id "R.T162";
chr1	Cufflinks	transcript	942748	948833	1000	+	.	expr "2.9597571024"; transcript_id "18.T56"; ref "0"; sample_id "18";
chr1	Cufflinks	exon	942748	943058	1000	+	.	transcript_id "18.T56";
chr1	Cufflinks	exon	943253	943377	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	943253	943377	1000	+	.	transcript_id "18.T56";
chr1	Cufflinks	exon	943253	943377	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	943253	943377	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	943253	943377	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	943253	943377	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	943253	943377	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	943253	943377	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	943253	943377	931	+	.	transcript_id "30.T23";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	943253	943377	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	943253	943377	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	943253	943377	.	+	.	transcript_id "R.T161";
chr1	HAVANA	exon	943253	943377	.	+	.	transcript_id "R.T162";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "18.T56";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	943698	943808	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	943698	943808	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	943698	943808	931	+	.	transcript_id "30.T23";
chr1	Cufflinks	exon	943698	944001	1000	+	.	transcript_id "8.T48";
chr1	Cufflinks	exon	943698	944063	685	+	.	transcript_id "16.T94";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	943698	943808	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	943698	943808	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	943698	943808	.	+	.	transcript_id "R.T161";
chr1	HAVANA	exon	943698	944259	.	+	.	transcript_id "R.T162";
chr1	Cufflinks	transcript	943798	959326	1000	-	.	expr "31.3983493482"; transcript_id "47.T97"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	943798	944800	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	943908	943938	1000	+	.	transcript_id "31.T41";
chr1	Cufflinks	exon	943908	943943	1000	+	.	transcript_id "40.T30";
chr1	Cufflinks	exon	943908	944027	1000	+	.	transcript_id "4.T50";
chr1	Cufflinks	exon	943908	944027	537	+	.	transcript_id "4.T51";
chr1	Cufflinks	exon	943908	944053	1000	+	.	transcript_id "6.T50";
chr1	Cufflinks	exon	943908	944063	1000	+	.	transcript_id "16.T95";
chr1	Cufflinks	exon	943908	944091	1000	+	.	transcript_id "21.T38";
chr1	Cufflinks	exon	943908	944091	1000	+	.	transcript_id "30.T24";
chr1	Cufflinks	exon	943908	944091	931	+	.	transcript_id "30.T23";
chr1	Cufflinks	exon	943908	948833	1000	+	.	transcript_id "18.T56";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T153";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T154";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T155";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T156";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T157";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T158";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T159";
chr1	ENSEMBL	exon	943908	944581	.	+	.	transcript_id "R.T160";
chr1	HAVANA	exon	943908	944575	.	+	.	transcript_id "R.T152";
chr1	HAVANA	exon	943908	944575	.	+	.	transcript_id "R.T161";
chr1	Cufflinks	transcript	944009	957480	1000	-	.	expr "25.6466032263"; transcript_id "41.T55"; ref "0"; sample_id "41";
chr1	Cufflinks	transcript	944009	964531	212	-	.	expr "5.4494281373"; transcript_id "41.T56"; ref "0"; sample_id "41";
chr1	Cufflinks	exon	944009	944800	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	944009	944800	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	transcript	944016	959296	1000	-	.	expr "18.5791367507"; transcript_id "34.T38"; ref "0"; sample_id "34";
chr1	Cufflinks	transcript	944016	959296	462	-	.	expr "8.5947539692"; transcript_id "34.T37"; ref "0"; sample_id "34";
chr1	Cufflinks	exon	944016	944800	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	944016	944800	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	transcript	944056	957275	1000	-	.	expr "38.3198893540"; transcript_id "29.T35"; ref "0"; sample_id "29";
chr1	Cufflinks	transcript	944056	957275	342	-	.	expr "13.1259545633"; transcript_id "29.T36"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	944056	944800	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	944056	944801	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	transcript	944062	957434	1000	-	.	expr "25.5197756427"; transcript_id "20.T46"; ref "0"; sample_id "20";
chr1	Cufflinks	exon	944062	944800	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	transcript	944066	954423	318	-	.	expr "7.1836503194"; transcript_id "16.T113"; ref "0"; sample_id "16";
chr1	Cufflinks	transcript	944066	954423	592	-	.	expr "13.3541028474"; transcript_id "16.T114"; ref "0"; sample_id "16";
chr1	Cufflinks	transcript	944066	959260	1000	-	.	expr "22.5439168709"; transcript_id "16.T116"; ref "0"; sample_id "16";
chr1	Cufflinks	transcript	944066	959260	597	-	.	expr "13.4674740115"; transcript_id "16.T115"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	944066	944800	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	944066	944800	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	944066	944800	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	944066	944800	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	transcript	944093	959335	1000	-	.	expr "41.1689661845"; transcript_id "4.T69"; ref "0"; sample_id "4";
chr1	Cufflinks	transcript	944093	959335	353	-	.	expr "14.5544229943"; transcript_id "4.T68"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	944093	944800	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	944093	944800	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	transcript	944099	959274	1000	-	.	expr "25.2670411349"; transcript_id "40.T38"; ref "0"; sample_id "40";
chr1	Cufflinks	exon	944099	944800	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	transcript	944122	959133	1000	-	.	expr "65.2933185212"; transcript_id "8.T95"; ref "0"; sample_id "8";
chr1	Cufflinks	transcript	944122	964528	132	-	.	expr "8.6385153118"; transcript_id "8.T96"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	944122	944800	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	944122	944800	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	transcript	944149	959345	1000	-	.	expr "44.1584255879"; transcript_id "17.T60"; ref "0"; sample_id "17";
chr1	Cufflinks	transcript	944149	959345	311	-	.	expr "13.7622366851"; transcript_id "17.T59"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	944149	944800	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	944149	944800	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	transcript	944160	957240	1000	-	.	expr "24.6794322569"; transcript_id "9.T33"; ref "0"; sample_id "9";
chr1	Cufflinks	transcript	944160	960761	415	-	.	expr "10.2501692625"; transcript_id "9.T34"; ref "0"; sample_id "9";
chr1	Cufflinks	exon	944160	944800	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	944160	944800	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	transcript	944172	964527	1000	-	.	expr "6.8762809519"; transcript_id "42.T39"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	944172	944800	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	transcript	944179	959314	1000	-	.	expr "40.7023082852"; transcript_id "7.T44"; ref "0"; sample_id "7";
chr1	Cufflinks	transcript	944179	959314	498	-	.	expr "20.3100711494"; transcript_id "7.T43"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	944179	944800	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	944179	944800	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	transcript	944180	959340	1000	-	.	expr "9.1324181973"; transcript_id "37.T23"; ref "0"; sample_id "37";
chr1	Cufflinks	transcript	944180	959340	630	-	.	expr "5.7546662788"; transcript_id "37.T22"; ref "0"; sample_id "37";
chr1	Cufflinks	exon	944180	944800	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	944180	944800	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	transcript	944181	959316	1000	-	.	expr "24.2092486448"; transcript_id "32.T62"; ref "0"; sample_id "32";
chr1	Cufflinks	transcript	944181	959316	538	-	.	expr "13.0371440424"; transcript_id "32.T61"; ref "0"; sample_id "32";
chr1	Cufflinks	exon	944181	944800	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	944181	944800	538	-	.	transcript_id "32.T61";
chr1	HAVANA	transcript	944204	947060	.	-	.	expr "0.0"; transcript_id "R.T167"; ref "1"; sample_id "R";
chr1	HAVANA	transcript	944204	959290	.	-	.	expr "0.0"; transcript_id "R.T168"; ref "1"; sample_id "R";
chr1	HAVANA	exon	944204	944800	.	-	.	transcript_id "R.T167";
chr1	HAVANA	exon	944204	944800	.	-	.	transcript_id "R.T168";
chr1	HAVANA	transcript	944205	958458	.	-	.	expr "0.0"; transcript_id "R.T169"; ref "1"; sample_id "R";
chr1	HAVANA	exon	944205	944800	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	transcript	944206	959296	578	-	.	expr "18.0722318812"; transcript_id "38.T47"; ref "0"; sample_id "38";
chr1	Cufflinks	transcript	944206	959314	1000	-	.	expr "31.2324997713"; transcript_id "38.T48"; ref "0"; sample_id "38";
chr1	Cufflinks	exon	944206	944800	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	944206	944800	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	transcript	944209	957455	1000	-	.	expr "22.0883819685"; transcript_id "1.T57"; ref "0"; sample_id "1";
chr1	Cufflinks	transcript	944209	960482	417	-	.	expr "9.2242222569"; transcript_id "1.T58"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	944209	944800	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	944209	944800	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	transcript	944221	959326	1000	-	.	expr "49.9021058865"; transcript_id "10.T43"; ref "0"; sample_id "10";
chr1	Cufflinks	exon	944221	944800	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	transcript	944238	957003	1000	-	.	expr "44.2023513131"; transcript_id "48.T62"; ref "0"; sample_id "48";
chr1	Cufflinks	transcript	944238	964585	111	-	.	expr "4.9122916997"; transcript_id "48.T63"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	944238	944800	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	944238	944800	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	transcript	944240	959314	1000	-	.	expr "34.9038162063"; transcript_id "54.T43"; ref "0"; sample_id "54";
chr1	Cufflinks	exon	944240	944800	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	transcript	944252	957276	1000	-	.	expr "33.1566072129"; transcript_id "25.T50"; ref "0"; sample_id "25";
chr1	Cufflinks	transcript	944252	957276	687	-	.	expr "22.7823244164"; transcript_id "25.T49"; ref "0"; sample_id "25";
chr1	Cufflinks	transcript	944252	959334	1000	-	.	expr "54.1332161942"; transcript_id "43.T48"; ref "0"; sample_id "43";
chr1	Cufflinks	transcript	944252	959334	281	-	.	expr "15.2415411914"; transcript_id "43.T47"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	944252	944800	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	944252	944800	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	944252	944800	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	944252	944800	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	transcript	944274	959326	1000	-	.	expr "41.0300302178"; transcript_id "52.T68"; ref "0"; sample_id "52";
chr1	Cufflinks	transcript	944274	959326	451	-	.	expr "18.5333506296"; transcript_id "52.T67"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	944274	944800	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	944274	944800	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	transcript	944279	956202	321	-	.	expr "25.1401794328"; transcript_id "35.T45"; ref "0"; sample_id "35";
chr1	Cufflinks	transcript	944279	959278	1000	-	.	expr "78.1684274990"; transcript_id "35.T46"; ref "0"; sample_id "35";
chr1	Cufflinks	transcript	944279	959316	1000	-	.	expr "25.4268802118"; transcript_id "15.T20"; ref "0"; sample_id "15";
chr1	Cufflinks	transcript	944279	959316	892	-	.	expr "22.6844997255"; transcript_id "15.T19"; ref "0"; sample_id "15";
chr1	Cufflinks	exon	944279	944800	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	944279	944800	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	944279	944800	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	944279	944800	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	transcript	944283	953325	1000	-	.	expr "72.7110998671"; transcript_id "2.T54"; ref "0"; sample_id "2";
chr1	Cufflinks	transcript	944283	957473	732	-	.	expr "17.4769600390"; transcript_id "53.T59"; ref "0"; sample_id "53";
chr1	Cufflinks	transcript	944283	959132	1000	-	.	expr "23.8594960998"; transcript_id "53.T60"; ref "0"; sample_id "53";
chr1	Cufflinks	transcript	944283	959316	1000	-	.	expr "51.6181898028"; transcript_id "44.T55"; ref "0"; sample_id "44";
chr1	Cufflinks	transcript	944283	959316	340	-	.	expr "17.5557741431"; transcript_id "44.T54"; ref "0"; sample_id "44";
chr1	Cufflinks	transcript	944283	964527	180	-	.	expr "6.0333734611"; transcript_id "28.T41"; ref "0"; sample_id "28";
chr1	Cufflinks	transcript	944283	964527	434	-	.	expr "14.5080461258"; transcript_id "28.T42"; ref "0"; sample_id "28";
chr1	Cufflinks	transcript	944283	964568	139	-	.	expr "3.3346560846"; transcript_id "53.T61"; ref "0"; sample_id "53";
chr1	Cufflinks	exon	944283	944800	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	944283	944800	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	944283	944800	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	944283	944800	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	944283	944800	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	944283	944800	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	944283	944800	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	944283	944801	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	transcript	944291	959314	1000	-	.	expr "21.7525666420"; transcript_id "14.T62"; ref "0"; sample_id "14";
chr1	Cufflinks	transcript	944291	959314	688	-	.	expr "14.9836768194"; transcript_id "14.T61"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	944291	944800	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	944291	944800	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	transcript	944292	957423	1000	-	.	expr "75.2450230223"; transcript_id "31.T52"; ref "0"; sample_id "31";
chr1	Cufflinks	transcript	944292	959278	1000	-	.	expr "20.1207088371"; transcript_id "19.T30"; ref "0"; sample_id "19";
chr1	Cufflinks	exon	944292	944800	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	944292	944800	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	transcript	944299	957253	1000	-	.	expr "35.3737143850"; transcript_id "5.T57"; ref "0"; sample_id "5";
chr1	Cufflinks	transcript	944299	957332	1000	-	.	expr "63.2285357346"; transcript_id "13.T62"; ref "0"; sample_id "13";
chr1	Cufflinks	transcript	944299	959316	1000	-	.	expr "47.9077217541"; transcript_id "51.T75"; ref "0"; sample_id "51";
chr1	Cufflinks	transcript	944299	959316	390	-	.	expr "18.6876095079"; transcript_id "51.T74"; ref "0"; sample_id "51";
chr1	Cufflinks	transcript	944299	964613	221	-	.	expr "14.0132326341"; transcript_id "13.T63"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	944299	944800	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	944299	944800	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	944299	944800	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	944299	944800	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	944299	944800	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	transcript	944317	954607	1000	-	.	expr "30.7093902955"; transcript_id "12.T34"; ref "0"; sample_id "12";
chr1	Cufflinks	transcript	944317	957255	772	-	.	expr "36.6857594220"; transcript_id "26.T56"; ref "0"; sample_id "26";
chr1	Cufflinks	transcript	944317	959313	1000	-	.	expr "47.4635860718"; transcript_id "26.T57"; ref "0"; sample_id "26";
chr1	Cufflinks	transcript	944317	959408	1000	-	.	expr "27.8560951919"; transcript_id "23.T44"; ref "0"; sample_id "23";
chr1	Cufflinks	transcript	944317	959408	471	-	.	expr "13.1362157963"; transcript_id "23.T43"; ref "0"; sample_id "23";
chr1	Cufflinks	transcript	944317	971198	118	-	.	expr "3.6366569754"; transcript_id "12.T36"; ref "0"; sample_id "12";
chr1	Cufflinks	transcript	944317	971198	122	-	.	expr "3.7677292311"; transcript_id "12.T35"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	944317	944800	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	944317	944800	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	944317	944800	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	944317	944800	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	944317	944800	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	944317	944800	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	944317	944800	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	transcript	944318	957273	521	-	.	expr "16.5077620288"; transcript_id "11.T31"; ref "0"; sample_id "11";
chr1	Cufflinks	transcript	944318	959314	1000	-	.	expr "31.6274804736"; transcript_id "11.T32"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	944318	944800	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	944318	944800	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	transcript	944322	957273	1000	-	.	expr "27.9792717307"; transcript_id "24.T55"; ref "0"; sample_id "24";
chr1	Cufflinks	transcript	944322	957273	589	-	.	expr "16.4848051469"; transcript_id "24.T56"; ref "0"; sample_id "24";
chr1	Cufflinks	transcript	944322	957417	218	-	.	expr "7.9866735315"; transcript_id "50.T52"; ref "0"; sample_id "50";
chr1	Cufflinks	transcript	944322	959278	1000	-	.	expr "17.7887744613"; transcript_id "3.T46"; ref "0"; sample_id "3";
chr1	Cufflinks	transcript	944322	959278	612	-	.	expr "10.8924669959"; transcript_id "3.T45"; ref "0"; sample_id "3";
chr1	Cufflinks	transcript	944322	959314	1000	-	.	expr "18.6184796226"; transcript_id "27.T63"; ref "0"; sample_id "27";
chr1	Cufflinks	transcript	944322	959314	1000	-	.	expr "36.5393159475"; transcript_id "50.T53"; ref "0"; sample_id "50";
chr1	Cufflinks	transcript	944322	959314	351	-	.	expr "6.5431996081"; transcript_id "27.T62"; ref "0"; sample_id "27";
chr1	Cufflinks	transcript	944322	959317	1000	-	.	expr "18.2919554047"; transcript_id "55.T49"; ref "0"; sample_id "55";
chr1	Cufflinks	transcript	944322	959317	462	-	.	expr "8.4545241164"; transcript_id "55.T48"; ref "0"; sample_id "55";
chr1	Cufflinks	transcript	944322	959340	1000	-	.	expr "64.1933101730"; transcript_id "49.T47"; ref "0"; sample_id "49";
chr1	Cufflinks	transcript	944322	959340	313	-	.	expr "20.1040605899"; transcript_id "49.T48"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	944322	944800	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	944322	944800	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	944322	944800	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	944322	944800	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	944322	944800	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	944322	944800	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	944322	944800	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	944322	944800	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	944322	944800	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	944322	944800	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	944322	944800	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	944322	944800	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	transcript	944327	946663	799	-	.	expr "19.7352726412"; transcript_id "30.T32"; ref "0"; sample_id "30";
chr1	Cufflinks	transcript	944327	959316	1000	-	.	expr "23.4661698716"; transcript_id "45.T49"; ref "0"; sample_id "45";
chr1	Cufflinks	transcript	944327	959316	398	-	.	expr "9.3596963474"; transcript_id "45.T48"; ref "0"; sample_id "45";
chr1	Cufflinks	transcript	944327	964652	193	-	.	expr "4.7726894220"; transcript_id "30.T33"; ref "0"; sample_id "30";
chr1	Cufflinks	exon	944327	944800	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	944327	944800	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	944327	944800	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	944327	944800	799	-	.	transcript_id "30.T32";
chr1	Cufflinks	transcript	944346	957273	857	-	.	expr "23.5590687980"; transcript_id "33.T31"; ref "0"; sample_id "33";
chr1	Cufflinks	transcript	944346	959315	1000	-	.	expr "27.4733181051"; transcript_id "33.T32"; ref "0"; sample_id "33";
chr1	Cufflinks	exon	944346	944800	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	944346	944800	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	transcript	944536	957273	291	-	.	expr "15.8310427803"; transcript_id "39.T40"; ref "0"; sample_id "39";
chr1	Cufflinks	transcript	944536	959314	1000	-	.	expr "54.2743461044"; transcript_id "39.T41"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	944536	944800	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	944536	944800	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	transcript	944543	957273	221	-	.	expr "10.1548321067"; transcript_id "18.T57"; ref "0"; sample_id "18";
chr1	Cufflinks	transcript	944543	959276	1000	-	.	expr "45.8145022421"; transcript_id "18.T58"; ref "0"; sample_id "18";
chr1	Cufflinks	exon	944543	944589	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	944543	944800	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	transcript	944544	959317	1000	-	.	expr "61.9552565155"; transcript_id "21.T53"; ref "0"; sample_id "21";
chr1	Cufflinks	transcript	944544	959317	528	-	.	expr "32.7560675860"; transcript_id "21.T52"; ref "0"; sample_id "21";
chr1	Cufflinks	exon	944544	944800	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	944544	944800	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	944615	944800	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	transcript	944777	957273	1000	-	.	expr "85.5169745822"; transcript_id "36.T53"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	944777	944800	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	945042	945146	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	945042	945146	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	945042	945146	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	945042	945146	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	945042	945146	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	945042	945146	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	945042	945146	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	945042	945146	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	945042	945146	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	945042	945146	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	945042	945146	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	945042	945146	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	945042	945146	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	945042	945146	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	945042	945146	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	945042	945146	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	945042	945146	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	945042	945146	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	945042	945146	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	945042	945146	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	945042	945146	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	945042	945146	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	945042	945146	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	945042	945146	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	945042	945146	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	945042	945146	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	945042	945146	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	945042	945146	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	945042	945146	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	945042	945146	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	945042	945146	799	-	.	transcript_id "30.T32";
chr1	Cufflinks	exon	945042	945146	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	945042	945146	.	-	.	transcript_id "R.T167";
chr1	HAVANA	exon	945042	945146	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	945057	945146	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	945057	945146	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	945057	945146	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	945057	945146	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	945057	945146	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	945057	945146	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	945057	945146	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	945057	945146	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	945057	945146	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	945057	945146	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	945057	945146	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	945057	945146	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	945057	945146	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	945057	945146	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	945057	945146	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	945057	945146	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	945057	945146	857	-	.	transcript_id "33.T31";
chr1	HAVANA	exon	945057	945146	.	-	.	transcript_id "R.T168";
chr1	Cufflinks	exon	945058	945146	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	945058	945146	342	-	.	transcript_id "29.T36";
chr1	HAVANA	transcript	945319	945562	.	-	.	expr "0.0"; transcript_id "R.T170"; ref "1"; sample_id "R";
chr1	HAVANA	exon	945319	945422	.	-	.	transcript_id "R.T170";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	945518	945653	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	945518	945653	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	945518	945653	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	945518	945653	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	945518	945653	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	945518	945653	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	945518	945653	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	945518	945653	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	945518	945653	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	945518	945653	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	945518	945653	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	945518	945653	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	945518	945653	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	945518	945653	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	945518	945653	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	945518	945653	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	945518	945653	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	945518	945653	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	945518	945653	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	945518	945653	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	945518	945653	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	945518	945653	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	945518	945653	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	945518	945653	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	945518	945653	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	945518	945653	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	945518	945653	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	945518	945653	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	945518	945653	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	945518	945653	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	945518	945653	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	945518	945653	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	945518	945653	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	945518	945653	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	945518	945653	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	945518	945653	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	945518	945653	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	945518	945653	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	945518	945653	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	945518	945653	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	945518	945653	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	945518	945653	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	945518	945653	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	945518	945653	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	945518	945653	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	945518	945653	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	945518	945653	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	945518	945653	799	-	.	transcript_id "30.T32";
chr1	Cufflinks	exon	945518	945653	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	945518	945653	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	945518	945562	.	-	.	transcript_id "R.T170";
chr1	HAVANA	exon	945518	945653	.	-	.	transcript_id "R.T167";
chr1	HAVANA	exon	945518	945653	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	945518	945653	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	transcript	946173	954563	1000	-	.	expr "33.4046831424"; transcript_id "28.T43"; ref "0"; sample_id "28";
chr1	Cufflinks	transcript	946173	957273	1000	-	.	expr "25.9569990352"; transcript_id "6.T53"; ref "0"; sample_id "6";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	946173	946286	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	946173	946286	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	946173	946286	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	946173	946286	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	946173	946286	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	946173	946286	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	946173	946286	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	946173	946286	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	946173	946286	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	946173	946286	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	946173	946286	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	946173	946286	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	946173	946286	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	946173	946286	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	946173	946286	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	946173	946286	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	946173	946286	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	946173	946286	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	946173	946286	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	946173	946286	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	946173	946286	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	946173	946286	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	946173	946286	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	946173	946286	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	946173	946286	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	946173	946286	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	946173	946286	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	946173	946286	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	946173	946286	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	946173	946286	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	946173	946286	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	946173	946286	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	946173	946286	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	946173	946286	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	946173	946286	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	946173	946286	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	946173	946286	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	946173	946286	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	946173	946286	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	946173	946286	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	946173	946286	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	946173	946286	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	946173	946286	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	946173	946286	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	946173	946286	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	946173	946286	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	946173	946286	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	946173	946286	799	-	.	transcript_id "30.T32";
chr1	Cufflinks	exon	946173	946286	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	946173	946286	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	946173	946286	.	-	.	transcript_id "R.T167";
chr1	HAVANA	exon	946173	946286	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	946173	946286	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	946402	946545	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	946402	946545	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	946402	946545	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	946402	946545	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	946402	946545	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	946402	946545	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	946402	946545	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	946402	946545	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	946402	946545	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	946402	946545	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	946402	946545	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	946402	946545	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	946402	946545	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	946402	946545	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	946402	946545	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	946402	946545	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	946402	946545	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	946402	946545	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	946402	946545	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	946402	946545	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	946402	946545	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	946402	946545	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	946402	946545	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	946402	946545	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	946402	946545	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	946402	946545	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	946402	946545	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	946402	946545	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	946402	946545	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	946402	946545	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	946402	946545	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	946402	946545	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	946402	946545	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	946402	946545	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	946402	946545	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	946402	946545	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	946402	946545	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	946402	946545	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	946402	946545	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	946402	946545	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	946402	946545	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	946402	946545	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	946402	946545	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	946402	946545	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	946402	946545	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	946402	946545	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	946402	946545	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	946402	946545	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	946402	946545	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	946402	946663	799	-	.	transcript_id "30.T32";
chr1	HAVANA	exon	946402	946545	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	946402	946545	.	-	.	transcript_id "R.T169";
chr1	HAVANA	exon	946402	947060	.	-	.	transcript_id "R.T167";
chr1	Cufflinks	transcript	948131	957273	1000	-	.	expr "24.6739603316"; transcript_id "30.T34"; ref "0"; sample_id "30";
chr1	Cufflinks	transcript	948131	957455	731	-	.	expr "20.4799458754"; transcript_id "24.T57"; ref "0"; sample_id "24";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	948131	948232	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	948131	948232	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	948131	948232	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	948131	948232	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	948131	948232	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	948131	948232	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	948131	948232	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	948131	948232	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	948131	948232	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	948131	948232	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	948131	948232	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	948131	948232	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	948131	948232	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	948131	948232	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	948131	948232	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	948131	948232	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	948131	948232	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	948131	948232	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	948131	948232	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	948131	948232	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	948131	948232	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	948131	948232	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	948131	948232	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	948131	948232	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	948131	948232	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	948131	948232	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	948131	948232	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	948131	948232	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	948131	948232	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	948131	948232	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	948131	948232	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	948131	948232	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	948131	948232	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	948131	948232	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	948131	948232	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	948131	948232	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	948131	948232	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	948131	948232	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	948131	948232	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	948131	948232	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	948131	948232	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	948131	948232	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	948131	948232	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	948131	948232	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	948131	948232	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	948131	948232	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	948131	948232	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	948131	948232	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	948131	948232	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	948131	948232	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	948131	948232	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	948131	948232	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	948490	948603	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	948490	948603	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	948490	948603	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	948490	948603	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	948490	948603	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	948490	948603	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	948490	948603	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	948490	948603	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	948490	948603	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	948490	948603	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	948490	948603	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	948490	948603	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	948490	948603	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	948490	948603	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	948490	948603	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	948490	948603	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	948490	948603	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	948490	948603	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	948490	948603	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	948490	948603	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	948490	948603	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	948490	948603	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	948490	948603	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	948490	948603	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	948490	948603	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	948490	948603	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	948490	948603	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	948490	948603	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	948490	948603	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	948490	948603	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	948490	948603	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	948490	948603	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	948490	948603	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	948490	948603	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	948490	948603	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	948490	948603	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	948490	948603	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	948490	948603	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	948490	948603	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	948490	948603	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	948490	948603	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	948490	948603	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	948490	948603	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	948490	948603	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	948490	948603	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	948490	948603	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	948490	948603	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	948490	948603	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	948490	948603	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	948490	948603	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	948490	948603	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	948490	948603	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	transcript	951127	957268	597	-	.	expr "39.0406019137"; transcript_id "8.T97"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	951127	951238	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	951127	951238	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	951127	951238	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	951127	951238	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	951127	951238	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	951127	951238	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	951127	951238	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	951127	951238	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	951127	951238	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	951127	951238	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	951127	951238	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	951127	951238	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	951127	951238	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	951127	951238	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	951127	951238	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	951127	951238	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	951127	951238	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	951127	951238	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	951127	951238	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	951127	951238	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	951127	951238	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	951127	951238	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	951127	951238	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	951127	951238	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	951127	951238	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	951127	951238	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	951127	951238	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	951127	951238	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	951127	951238	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	951127	951238	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	951127	951238	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	951127	951238	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	951127	951238	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	951127	951238	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	951127	951238	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	951127	951238	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	951127	951238	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	951127	951238	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	951127	951238	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	951127	951238	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	951127	951238	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	951127	951238	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	951127	951238	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	951127	951238	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	951127	951238	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	951127	951238	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	951127	951238	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	951127	951238	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	951127	951238	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	951127	951238	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	951127	951238	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	951127	951238	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	951127	951238	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	952000	952139	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	952000	952139	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	952000	952139	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	952000	952139	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	952000	952139	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	952000	952139	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	952000	952139	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	952000	952139	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	952000	952139	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	952000	952139	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	952000	952139	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	952000	952139	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	952000	952139	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	952000	952139	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	952000	952139	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	952000	952139	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	952000	952139	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	952000	952139	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	952000	952139	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	952000	952139	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	952000	952139	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	952000	952139	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	952000	952139	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	952000	952139	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	952000	952139	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	952000	952139	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	952000	952139	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	952000	952139	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	952000	952139	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	952000	952139	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	952000	952139	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	952000	952139	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	952000	952139	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	952000	952139	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	952000	952139	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	952000	952139	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	952000	952139	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	952000	952139	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	952000	952139	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	952000	952139	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	952000	952139	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	952000	952139	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	952000	952139	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	952000	952139	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	952000	952139	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	952000	952139	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	952000	952139	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	952000	952139	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	952000	952139	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	952000	952139	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	952000	952139	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	952000	952139	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	952000	952139	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "2.T54";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	952412	952600	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	952412	952600	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	952412	952600	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	952412	952600	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	952412	952600	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	952412	952600	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	952412	952600	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	952412	952600	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	952412	952600	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	952412	952600	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	952412	952600	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	952412	952600	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	952412	952600	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	952412	952600	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	952412	952600	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	952412	952600	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	952412	952600	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	952412	952600	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	952412	952600	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	952412	952600	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	952412	952600	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	952412	952600	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	952412	952600	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	952412	952600	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	952412	952600	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	952412	952600	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	952412	952600	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	952412	952600	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	952412	952600	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	952412	952600	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	952412	952600	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	952412	952600	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	952412	952600	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	952412	952600	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	952412	952600	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	952412	952600	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	952412	952600	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	952412	952600	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	952412	952600	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	952412	952600	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	952412	952600	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	952412	952600	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	952412	952600	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	952412	952600	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	952412	952600	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	952412	952600	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	952412	952600	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	952412	952600	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	952412	952600	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	952412	952600	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	952412	952600	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	952412	952600	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	952412	952600	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	953175	953288	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	953175	953288	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	953175	953288	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	953175	953288	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	953175	953288	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	953175	953288	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	953175	953288	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	953175	953288	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	953175	953288	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	953175	953288	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	953175	953288	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	953175	953288	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	953175	953288	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	953175	953288	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	953175	953288	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	953175	953288	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	953175	953288	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	953175	953288	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	953175	953288	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	953175	953288	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	953175	953288	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	953175	953288	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	953175	953288	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	953175	953288	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	953175	953288	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	953175	953288	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	953175	953288	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	953175	953288	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	953175	953288	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	953175	953288	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	953175	953288	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	953175	953288	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	953175	953288	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	953175	953288	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	953175	953288	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	953175	953288	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	953175	953288	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	953175	953288	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	953175	953288	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	953175	953288	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	953175	953288	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	953175	953288	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	953175	953288	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	953175	953288	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	953175	953288	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	953175	953288	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	953175	953288	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	953175	953288	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	953175	953288	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	953175	953288	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	953175	953288	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	953175	953325	1000	-	.	transcript_id "2.T54";
chr1	HAVANA	exon	953175	953288	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	953175	953288	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	953782	953802	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "12.T34";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	953782	953892	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	953782	953892	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	953782	953892	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	953782	953892	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	953782	953892	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	953782	953892	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	953782	953892	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	953782	953892	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	953782	953892	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	953782	953892	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	953782	953892	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	953782	953892	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	953782	953892	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	953782	953892	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	953782	953892	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	953782	953892	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	953782	953892	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	953782	953892	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	953782	953892	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	953782	953892	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	953782	953892	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	953782	953892	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	953782	953892	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	953782	953892	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	953782	953892	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	953782	953892	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	953782	953892	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	953782	953892	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	953782	953892	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	953782	953892	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	953782	953892	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	953782	953892	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	953782	953892	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	953782	953892	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	953782	953892	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	953782	953892	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	953782	953892	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	953782	953892	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	953782	953892	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	953782	953892	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	953782	953892	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	953782	953892	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	953782	953892	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	953782	953892	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	953782	953892	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	953782	953892	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	953782	953892	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	953782	953892	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	953782	953892	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	953782	953892	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	953782	953892	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	953782	953893	1000	-	.	transcript_id "29.T35";
chr1	HAVANA	exon	953782	953892	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	953782	953892	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	953830	953892	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	954004	954082	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	954004	954082	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	954004	954082	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	954004	954082	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	954004	954082	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	954004	954082	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	954004	954082	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	954004	954082	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	954004	954082	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	954004	954082	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	954004	954082	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	954004	954082	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	954004	954082	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	954004	954082	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	954004	954082	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	954004	954082	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	954004	954082	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	954004	954082	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	954004	954082	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	954004	954082	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	954004	954082	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	954004	954082	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	954004	954082	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	954004	954082	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	954004	954082	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	954004	954082	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	954004	954082	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	954004	954082	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	954004	954082	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	954004	954082	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	954004	954082	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	954004	954082	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	954004	954082	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	954004	954082	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	954004	954082	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	954004	954082	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	954004	954082	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	954004	954082	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	954004	954082	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	954004	954082	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	954004	954082	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	954004	954082	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	954004	954082	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	954004	954082	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	954004	954082	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	954004	954082	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	954004	954083	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	954004	954083	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	954004	954083	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	954004	954083	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	954004	954083	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	954004	954084	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	954004	954423	318	-	.	transcript_id "16.T113";
chr1	Cufflinks	exon	954004	954423	592	-	.	transcript_id "16.T114";
chr1	Cufflinks	exon	954004	954563	1000	-	.	transcript_id "28.T43";
chr1	Cufflinks	exon	954004	954607	1000	-	.	transcript_id "12.T34";
chr1	HAVANA	exon	954004	954082	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	954004	954523	.	-	.	transcript_id "R.T169";
chr1	Cufflinks	exon	954005	954082	1000	-	.	transcript_id "29.T35";
chr1	HAVANA	transcript	954426	959309	.	-	.	expr "0.0"; transcript_id "R.T171"; ref "1"; sample_id "R";
chr1	HAVANA	exon	954426	954523	.	-	.	transcript_id "R.T171";
chr1	Cufflinks	exon	954464	954523	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	954464	954523	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	954464	954523	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	954464	954523	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	954464	954523	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	transcript	954652	955111	1000	.	.	expr "5.1893198896"; transcript_id "16.T117"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	954652	955111	1000	.	.	transcript_id "16.T117";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	955923	956013	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	955923	956013	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	955923	956013	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	955923	956013	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	955923	956013	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	955923	956013	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	955923	956013	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	955923	956013	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	955923	956013	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	955923	956013	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	955923	956013	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	955923	956013	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	955923	956013	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	955923	956013	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	955923	956013	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	955923	956013	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	955923	956013	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	955923	956013	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	955923	956013	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	955923	956013	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	955923	956013	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	955923	956013	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	955923	956013	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	955923	956013	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	955923	956013	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	955923	956013	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	955923	956013	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	955923	956013	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	955923	956013	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	955923	956013	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	955923	956013	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	955923	956013	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	955923	956013	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	955923	956013	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	955923	956013	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	955923	956013	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	955923	956013	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	955923	956013	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	955923	956013	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	955923	956013	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	955923	956013	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	955923	956013	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	955923	956013	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	955923	956013	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	955923	956013	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	955923	956013	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	955923	956013	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	955923	956014	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	955923	956014	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	955923	956014	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	955923	956014	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	955923	956014	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	955923	956014	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	955923	956215	1000	-	.	transcript_id "41.T55";
chr1	HAVANA	exon	955923	956013	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	955923	956013	.	-	.	transcript_id "R.T169";
chr1	HAVANA	exon	955923	956013	.	-	.	transcript_id "R.T171";
chr1	Cufflinks	exon	956095	956202	321	-	.	transcript_id "35.T45";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "1.T57";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	956095	956215	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	956095	956215	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	956095	956215	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	956095	956215	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	956095	956215	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	956095	956215	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	956095	956215	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	956095	956215	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	956095	956215	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	956095	956215	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	956095	956215	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	956095	956215	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	956095	956215	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	956095	956215	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	956095	956215	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	956095	956215	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	956095	956215	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	956095	956215	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	956095	956215	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	956095	956215	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	956095	956215	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	956095	956215	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	956095	956215	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	956095	956215	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	956095	956215	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	956095	956215	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	956095	956215	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	956095	956215	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	956095	956215	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	956095	956215	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	956095	956215	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	956095	956215	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	956095	956215	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	956095	956215	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	956095	956215	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	956095	956215	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	956095	956215	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	956095	956215	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	956095	956215	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	956095	956215	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	956095	956215	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	956095	956215	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	956095	956215	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	956095	956215	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	956095	956215	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	956095	956215	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	956095	956215	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	956095	956215	892	-	.	transcript_id "15.T19";
chr1	HAVANA	exon	956095	956215	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	956095	956215	.	-	.	transcript_id "R.T169";
chr1	HAVANA	exon	956095	956215	.	-	.	transcript_id "R.T171";
chr1	Cufflinks	exon	956894	957003	1000	-	.	transcript_id "48.T62";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	956894	957025	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	956894	957025	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	956894	957025	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	956894	957025	122	-	.	transcript_id "12.T35";
chr1	Cufflinks	exon	956894	957025	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	956894	957025	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	956894	957025	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	956894	957025	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	956894	957025	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	956894	957025	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	956894	957025	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	956894	957025	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	956894	957025	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	956894	957025	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	956894	957025	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	956894	957025	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	956894	957025	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	956894	957025	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	956894	957025	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	956894	957025	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	956894	957025	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	956894	957025	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	956894	957025	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	956894	957025	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	956894	957025	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	956894	957025	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	956894	957025	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	956894	957025	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	956894	957025	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	956894	957025	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	956894	957025	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	956894	957025	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	956894	957025	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	956894	957025	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	956894	957025	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	956894	957025	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	956894	957025	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	956894	957025	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	956894	957025	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	956894	957025	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	956894	957025	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	956894	957025	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	956894	957025	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	956894	957025	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	956894	957025	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	956894	957025	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	956894	957025	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	956894	957273	1000	-	.	transcript_id "36.T53";
chr1	Cufflinks	exon	956894	957273	1000	-	.	transcript_id "6.T53";
chr1	Cufflinks	exon	956894	957273	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	956894	957455	1000	-	.	transcript_id "1.T57";
chr1	HAVANA	exon	956894	957025	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	956894	957025	.	-	.	transcript_id "R.T169";
chr1	HAVANA	exon	956894	957025	.	-	.	transcript_id "R.T171";
chr1	Cufflinks	exon	957099	957240	1000	-	.	transcript_id "9.T33";
chr1	Cufflinks	exon	957099	957253	1000	-	.	transcript_id "5.T57";
chr1	Cufflinks	exon	957099	957255	772	-	.	transcript_id "26.T56";
chr1	Cufflinks	exon	957099	957268	597	-	.	transcript_id "8.T97";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "24.T55";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "30.T34";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	957099	957273	1000	-	.	transcript_id "8.T95";
chr1	Cufflinks	exon	957099	957273	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	957099	957273	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	957099	957273	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	957099	957273	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	957099	957273	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	957099	957273	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	957099	957273	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	957099	957273	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	957099	957273	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	957099	957273	221	-	.	transcript_id "18.T57";
chr1	Cufflinks	exon	957099	957273	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	957099	957273	291	-	.	transcript_id "39.T40";
chr1	Cufflinks	exon	957099	957273	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	957099	957273	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	957099	957273	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	957099	957273	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	957099	957273	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	957099	957273	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	957099	957273	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	957099	957273	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	957099	957273	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	957099	957273	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	957099	957273	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	957099	957273	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	957099	957273	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	957099	957273	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	957099	957273	521	-	.	transcript_id "11.T31";
chr1	Cufflinks	exon	957099	957273	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	957099	957273	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	957099	957273	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	957099	957273	589	-	.	transcript_id "24.T56";
chr1	Cufflinks	exon	957099	957273	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	957099	957273	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	957099	957273	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	957099	957273	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	957099	957273	857	-	.	transcript_id "33.T31";
chr1	Cufflinks	exon	957099	957273	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	957099	957275	1000	-	.	transcript_id "29.T35";
chr1	Cufflinks	exon	957099	957275	342	-	.	transcript_id "29.T36";
chr1	Cufflinks	exon	957099	957276	1000	-	.	transcript_id "25.T50";
chr1	Cufflinks	exon	957099	957276	687	-	.	transcript_id "25.T49";
chr1	Cufflinks	exon	957099	957332	1000	-	.	transcript_id "13.T62";
chr1	Cufflinks	exon	957099	957417	218	-	.	transcript_id "50.T52";
chr1	Cufflinks	exon	957099	957423	1000	-	.	transcript_id "31.T52";
chr1	Cufflinks	exon	957099	957434	1000	-	.	transcript_id "20.T46";
chr1	Cufflinks	exon	957099	957455	731	-	.	transcript_id "24.T57";
chr1	Cufflinks	exon	957099	957473	732	-	.	transcript_id "53.T59";
chr1	Cufflinks	exon	957099	957480	1000	-	.	transcript_id "41.T55";
chr1	Cufflinks	exon	957099	957589	176	-	.	transcript_id "6.T51";
chr1	Cufflinks	exon	957099	959081	122	-	.	transcript_id "12.T35";
chr1	HAVANA	exon	957099	957273	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	957099	957273	.	-	.	transcript_id "R.T171";
chr1	HAVANA	exon	957099	958458	.	-	.	transcript_id "R.T169";
chr1	HAVANA	transcript	958246	959256	.	-	.	expr "0.0"; transcript_id "R.T172"; ref "1"; sample_id "R";
chr1	HAVANA	exon	958246	959081	.	-	.	transcript_id "R.T172";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	958929	959081	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	958929	959081	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	958929	959081	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	958929	959081	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	958929	959081	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	958929	959081	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	958929	959081	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	958929	959081	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	958929	959081	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	958929	959081	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	958929	959081	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	958929	959081	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	958929	959081	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	958929	959081	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	958929	959081	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	958929	959081	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	958929	959081	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	958929	959081	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	958929	959081	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	958929	959081	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	958929	959081	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	958929	959081	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	958929	959081	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	958929	959081	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	958929	959081	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	958929	959081	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	958929	959081	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	958929	959081	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	958929	959081	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	958929	959081	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	958929	959081	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	958929	959081	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	958929	959081	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	958929	959081	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	958929	959132	1000	-	.	transcript_id "53.T60";
chr1	Cufflinks	exon	958929	959133	1000	-	.	transcript_id "8.T95";
chr1	HAVANA	exon	958929	959081	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	958929	959081	.	-	.	transcript_id "R.T171";
chr1	Cufflinks	exon	959215	959260	1000	-	.	transcript_id "16.T116";
chr1	Cufflinks	exon	959215	959260	597	-	.	transcript_id "16.T115";
chr1	Cufflinks	exon	959215	959274	1000	-	.	transcript_id "40.T38";
chr1	Cufflinks	exon	959215	959276	1000	-	.	transcript_id "18.T58";
chr1	Cufflinks	exon	959215	959278	1000	-	.	transcript_id "19.T30";
chr1	Cufflinks	exon	959215	959278	1000	-	.	transcript_id "3.T46";
chr1	Cufflinks	exon	959215	959278	1000	-	.	transcript_id "35.T46";
chr1	Cufflinks	exon	959215	959278	612	-	.	transcript_id "3.T45";
chr1	Cufflinks	exon	959215	959296	1000	-	.	transcript_id "34.T38";
chr1	Cufflinks	exon	959215	959296	462	-	.	transcript_id "34.T37";
chr1	Cufflinks	exon	959215	959296	578	-	.	transcript_id "38.T47";
chr1	Cufflinks	exon	959215	959313	1000	-	.	transcript_id "26.T57";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "11.T32";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "14.T62";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "27.T63";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "38.T48";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "39.T41";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "50.T53";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "54.T43";
chr1	Cufflinks	exon	959215	959314	1000	-	.	transcript_id "7.T44";
chr1	Cufflinks	exon	959215	959314	351	-	.	transcript_id "27.T62";
chr1	Cufflinks	exon	959215	959314	498	-	.	transcript_id "7.T43";
chr1	Cufflinks	exon	959215	959314	688	-	.	transcript_id "14.T61";
chr1	Cufflinks	exon	959215	959315	1000	-	.	transcript_id "33.T32";
chr1	Cufflinks	exon	959215	959316	1000	-	.	transcript_id "15.T20";
chr1	Cufflinks	exon	959215	959316	1000	-	.	transcript_id "32.T62";
chr1	Cufflinks	exon	959215	959316	1000	-	.	transcript_id "44.T55";
chr1	Cufflinks	exon	959215	959316	1000	-	.	transcript_id "45.T49";
chr1	Cufflinks	exon	959215	959316	1000	-	.	transcript_id "46.T53";
chr1	Cufflinks	exon	959215	959316	1000	-	.	transcript_id "51.T75";
chr1	Cufflinks	exon	959215	959316	340	-	.	transcript_id "44.T54";
chr1	Cufflinks	exon	959215	959316	390	-	.	transcript_id "51.T74";
chr1	Cufflinks	exon	959215	959316	398	-	.	transcript_id "45.T48";
chr1	Cufflinks	exon	959215	959316	538	-	.	transcript_id "32.T61";
chr1	Cufflinks	exon	959215	959316	892	-	.	transcript_id "15.T19";
chr1	Cufflinks	exon	959215	959317	1000	-	.	transcript_id "21.T53";
chr1	Cufflinks	exon	959215	959317	1000	-	.	transcript_id "55.T49";
chr1	Cufflinks	exon	959215	959317	462	-	.	transcript_id "55.T48";
chr1	Cufflinks	exon	959215	959317	528	-	.	transcript_id "21.T52";
chr1	Cufflinks	exon	959215	959326	1000	-	.	transcript_id "10.T43";
chr1	Cufflinks	exon	959215	959326	1000	-	.	transcript_id "47.T97";
chr1	Cufflinks	exon	959215	959326	1000	-	.	transcript_id "52.T68";
chr1	Cufflinks	exon	959215	959326	451	-	.	transcript_id "52.T67";
chr1	Cufflinks	exon	959215	959334	1000	-	.	transcript_id "43.T48";
chr1	Cufflinks	exon	959215	959334	281	-	.	transcript_id "43.T47";
chr1	Cufflinks	exon	959215	959335	1000	-	.	transcript_id "4.T69";
chr1	Cufflinks	exon	959215	959335	353	-	.	transcript_id "4.T68";
chr1	Cufflinks	exon	959215	959340	1000	-	.	transcript_id "37.T23";
chr1	Cufflinks	exon	959215	959340	1000	-	.	transcript_id "49.T47";
chr1	Cufflinks	exon	959215	959340	313	-	.	transcript_id "49.T48";
chr1	Cufflinks	exon	959215	959340	630	-	.	transcript_id "37.T22";
chr1	Cufflinks	exon	959215	959345	1000	-	.	transcript_id "17.T60";
chr1	Cufflinks	exon	959215	959345	311	-	.	transcript_id "17.T59";
chr1	Cufflinks	exon	959215	959408	1000	-	.	transcript_id "23.T44";
chr1	Cufflinks	exon	959215	959408	471	-	.	transcript_id "23.T43";
chr1	Cufflinks	exon	959215	960482	417	-	.	transcript_id "1.T58";
chr1	Cufflinks	exon	959215	960761	415	-	.	transcript_id "9.T34";
chr1	Cufflinks	exon	959215	964527	1000	-	.	transcript_id "42.T39";
chr1	Cufflinks	exon	959215	964527	180	-	.	transcript_id "28.T41";
chr1	Cufflinks	exon	959215	964527	434	-	.	transcript_id "28.T42";
chr1	Cufflinks	exon	959215	964528	132	-	.	transcript_id "8.T96";
chr1	Cufflinks	exon	959215	964531	212	-	.	transcript_id "41.T56";
chr1	Cufflinks	exon	959215	964568	139	-	.	transcript_id "53.T61";
chr1	Cufflinks	exon	959215	964585	111	-	.	transcript_id "48.T63";
chr1	Cufflinks	exon	959215	964599	147	-	.	transcript_id "6.T52";
chr1	Cufflinks	exon	959215	964613	221	-	.	transcript_id "13.T63";
chr1	Cufflinks	exon	959215	964652	193	-	.	transcript_id "30.T33";
chr1	Cufflinks	exon	959215	971198	118	-	.	transcript_id "12.T36";
chr1	Cufflinks	exon	959215	971198	122	-	.	transcript_id "12.T35";
chr1	HAVANA	exon	959215	959256	.	-	.	transcript_id "R.T172";
chr1	HAVANA	exon	959215	959290	.	-	.	transcript_id "R.T168";
chr1	HAVANA	exon	959215	959309	.	-	.	transcript_id "R.T171";
chr1	Cufflinks	transcript	959362	959823	1000	.	.	expr "1.1521434009"; transcript_id "16.T102"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	959362	959823	1000	.	.	transcript_id "16.T102";
chr1	Cufflinks	transcript	959406	960483	1000	.	.	expr "0.7888535023"; transcript_id "35.T28"; ref "0"; sample_id "35";
chr1	Cufflinks	transcript	959406	960752	1000	.	.	expr "1.2139601695"; transcript_id "17.T35"; ref "0"; sample_id "17";
chr1	Cufflinks	transcript	959406	960761	1000	.	.	expr "0.7645189137"; transcript_id "34.T32"; ref "0"; sample_id "34";
chr1	Cufflinks	transcript	959406	975959	957	+	.	expr "2.7277046966"; transcript_id "51.T69"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	959406	960483	1000	.	.	transcript_id "35.T28";
chr1	Cufflinks	exon	959406	960752	1000	.	.	transcript_id "17.T35";
chr1	Cufflinks	exon	959406	960761	1000	.	.	transcript_id "34.T32";
chr1	Cufflinks	exon	959406	960800	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	transcript	959418	973066	1000	+	.	expr "3.5332090058"; transcript_id "15.T16"; ref "0"; sample_id "15";
chr1	Cufflinks	transcript	959418	975774	653	+	.	expr "2.3103643605"; transcript_id "15.T17"; ref "0"; sample_id "15";
chr1	Cufflinks	exon	959418	961552	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	959418	961750	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	transcript	959429	960476	1000	.	.	expr "0.4358300156"; transcript_id "14.T46"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	959429	960476	1000	.	.	transcript_id "14.T46";
chr1	Cufflinks	transcript	959442	970758	528	+	.	expr "2.4444594410"; transcript_id "43.T39"; ref "0"; sample_id "43";
chr1	Cufflinks	transcript	959442	976665	1000	-	.	expr "1.5983024664"; transcript_id "43.T41"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	959442	961552	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	959442	976269	1000	-	.	transcript_id "43.T41";
chr1	Cufflinks	transcript	959443	960763	1000	.	.	expr "0.4334429998"; transcript_id "44.T39"; ref "0"; sample_id "44";
chr1	Cufflinks	transcript	959443	964561	1000	.	.	expr "1.1293950911"; transcript_id "49.T38"; ref "0"; sample_id "49";
chr1	Cufflinks	transcript	959443	966773	1000	+	.	expr "1.7692474506"; transcript_id "49.T40"; ref "0"; sample_id "49";
chr1	Cufflinks	transcript	959443	966773	697	+	.	expr "1.2340168862"; transcript_id "49.T39"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	959443	960763	1000	.	.	transcript_id "44.T39";
chr1	Cufflinks	exon	959443	960800	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	959443	960800	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	959443	964561	1000	.	.	transcript_id "49.T38";
chr1	Cufflinks	transcript	959455	959924	1000	.	.	expr "0.7993710824"; transcript_id "50.T45"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	959455	959924	1000	.	.	transcript_id "50.T45";
chr1	Cufflinks	transcript	959462	963758	160	+	.	expr "0.5417378396"; transcript_id "18.T45"; ref "0"; sample_id "18";
chr1	Cufflinks	exon	959462	960800	160	+	.	transcript_id "18.T45";
chr1	Cufflinks	transcript	959465	960754	1000	.	.	expr "0.2740298227"; transcript_id "37.T17"; ref "0"; sample_id "37";
chr1	Cufflinks	exon	959465	960754	1000	.	.	transcript_id "37.T17";
chr1	Cufflinks	transcript	959504	966947	786	+	.	expr "1.2119970545"; transcript_id "23.T31"; ref "0"; sample_id "23";
chr1	Cufflinks	exon	959504	960800	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	transcript	959532	960524	1000	.	.	expr "0.3169070508"; transcript_id "4.T56"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	959532	960524	1000	.	.	transcript_id "4.T56";
chr1	Cufflinks	transcript	959589	960522	1000	.	.	expr "0.3329421279"; transcript_id "52.T46"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	959589	960522	1000	.	.	transcript_id "52.T46";
chr1	Cufflinks	transcript	960033	960381	1000	.	.	expr "2.4226272238"; transcript_id "16.T103"; ref "0"; sample_id "16";
chr1	Cufflinks	transcript	960033	960756	1000	.	.	expr "1.1130782565"; transcript_id "50.T46"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	960033	960381	1000	.	.	transcript_id "16.T103";
chr1	Cufflinks	exon	960033	960756	1000	.	.	transcript_id "50.T46";
chr1	Cufflinks	transcript	960062	960775	1000	.	.	expr "0.6053041008"; transcript_id "33.T24"; ref "0"; sample_id "33";
chr1	Cufflinks	exon	960062	960775	1000	.	.	transcript_id "33.T24";
chr1	Cufflinks	transcript	960121	960761	1000	.	.	expr "0.5954553224"; transcript_id "3.T37"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	960121	960761	1000	.	.	transcript_id "3.T37";
chr1	Cufflinks	transcript	960507	964176	665	+	.	expr "2.4202252665"; transcript_id "47.T98"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	960507	960800	665	+	.	transcript_id "47.T98";
chr1	Cufflinks	transcript	960551	966183	528	+	.	expr "0.8929806362"; transcript_id "27.T51"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	960551	960800	528	+	.	transcript_id "27.T51";
chr1	Cufflinks	transcript	960570	964551	1000	.	.	expr "1.5116167349"; transcript_id "35.T30"; ref "0"; sample_id "35";
chr1	Cufflinks	transcript	960570	975452	439	+	.	expr "1.4464135018"; transcript_id "35.T31"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	960570	960800	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	960570	964551	1000	.	.	transcript_id "35.T30";
chr1	Cufflinks	transcript	960574	960767	1000	.	.	expr "8.8492557709"; transcript_id "16.T104"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	960574	960767	1000	.	.	transcript_id "16.T104";
chr1	Cufflinks	transcript	960580	960776	1000	.	.	expr "7.5025205372"; transcript_id "4.T58"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	960580	960776	1000	.	.	transcript_id "4.T58";
chr1	Cufflinks	transcript	960582	960774	1000	.	.	expr "5.1460691930"; transcript_id "19.T26"; ref "0"; sample_id "19";
chr1	Cufflinks	transcript	960582	966942	1000	+	.	expr "1.4715813759"; transcript_id "1.T47"; ref "0"; sample_id "1";
chr1	Cufflinks	transcript	960582	975366	756	+	.	expr "1.1139106135"; transcript_id "1.T48"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	960582	960774	1000	.	.	transcript_id "19.T26";
chr1	Cufflinks	exon	960582	960800	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	960582	960800	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	transcript	960586	965941	1000	+	.	expr "1.6930740496"; transcript_id "26.T48"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	960586	960800	1000	+	.	transcript_id "26.T48";
chr1	HAVANA	transcript	960587	965715	.	+	.	expr "0.0"; transcript_id "R.T173"; ref "1"; sample_id "R";
chr1	HAVANA	exon	960587	960800	.	+	.	transcript_id "R.T173";
chr1	ENSEMBL	transcript	960639	965602	.	+	.	expr "0.0"; transcript_id "R.T174"; ref "1"; sample_id "R";
chr1	ENSEMBL	exon	960639	960699	.	+	.	transcript_id "R.T174";
chr1	Cufflinks	transcript	960801	975828	1000	+	.	expr "2.8493665177"; transcript_id "51.T70"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	960801	960807	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	transcript	960823	961197	1000	.	.	expr "1.7100060044"; transcript_id "44.T40"; ref "0"; sample_id "44";
chr1	Cufflinks	exon	960823	961197	1000	.	.	transcript_id "44.T40";
chr1	Cufflinks	transcript	960824	961179	1000	.	.	expr "4.9107115929"; transcript_id "47.T103"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	960824	961179	1000	.	.	transcript_id "47.T103";
chr1	Cufflinks	transcript	960830	961178	1000	.	.	expr "2.4245143370"; transcript_id "51.T71"; ref "0"; sample_id "51";
chr1	Cufflinks	transcript	960830	961197	1000	.	.	expr "0.5638688330"; transcript_id "4.T57"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	960830	961178	1000	.	.	transcript_id "51.T71";
chr1	Cufflinks	exon	960830	961197	1000	.	.	transcript_id "4.T57";
chr1	Cufflinks	transcript	960835	961197	1000	.	.	expr "1.1735553877"; transcript_id "27.T55"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	960835	961197	1000	.	.	transcript_id "27.T55";
chr1	Cufflinks	transcript	960854	961172	1000	.	.	expr "2.2039548679"; transcript_id "50.T47"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	960854	961172	1000	.	.	transcript_id "50.T47";
chr1	Cufflinks	transcript	960881	974461	1000	+	.	expr "0.7898397551"; transcript_id "37.T19"; ref "0"; sample_id "37";
chr1	Cufflinks	transcript	960881	974461	808	+	.	expr "0.6385721600"; transcript_id "37.T20"; ref "0"; sample_id "37";
chr1	Cufflinks	exon	960881	960921	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	960881	960921	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	transcript	960887	965558	224	+	.	expr "0.7576505243"; transcript_id "18.T47"; ref "0"; sample_id "18";
chr1	Cufflinks	transcript	960887	965558	396	+	.	expr "1.3367397869"; transcript_id "18.T46"; ref "0"; sample_id "18";
chr1	Cufflinks	transcript	960887	965558	552	+	.	expr "1.8599230530"; transcript_id "18.T48"; ref "0"; sample_id "18";
chr1	Cufflinks	transcript	960887	975335	701	+	.	expr "0.8185064538"; transcript_id "19.T32"; ref "0"; sample_id "19";
chr1	Cufflinks	exon	960887	960921	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	960887	960921	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	960887	960921	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	960887	962047	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	transcript	960888	966969	729	+	.	expr "1.3414827857"; transcript_id "11.T23"; ref "0"; sample_id "11";
chr1	Cufflinks	transcript	960888	975861	1000	+	.	expr "1.8386132835"; transcript_id "11.T24"; ref "0"; sample_id "11";
chr1	Cufflinks	exon	960888	961552	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	960888	961750	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	transcript	960899	966971	550	+	.	expr "1.7815027861"; transcript_id "21.T40"; ref "0"; sample_id "21";
chr1	Cufflinks	transcript	960899	970767	739	+	.	expr "2.3923724259"; transcript_id "21.T41"; ref "0"; sample_id "21";
chr1	Cufflinks	transcript	960899	970956	961	+	.	expr "1.3741572156"; transcript_id "34.T34"; ref "0"; sample_id "34";
chr1	Cufflinks	transcript	960899	975974	1000	+	.	expr "1.4291267649"; transcript_id "34.T35"; ref "0"; sample_id "34";
chr1	Cufflinks	transcript	960899	976278	1000	+	.	expr "3.2343435206"; transcript_id "21.T42"; ref "0"; sample_id "21";
chr1	Cufflinks	exon	960899	960921	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	960899	960921	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	960899	960921	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	960899	960921	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	960899	960921	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	transcript	960901	961145	1000	.	.	expr "2.9575649290"; transcript_id "17.T36"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	960901	961145	1000	.	.	transcript_id "17.T36";
chr1	Cufflinks	transcript	960905	976233	1000	+	.	expr "1.6907855141"; transcript_id "55.T46"; ref "0"; sample_id "55";
chr1	Cufflinks	transcript	960905	976233	731	+	.	expr "1.2367044386"; transcript_id "55.T45"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	960905	960921	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	960905	960921	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	transcript	960910	976706	1000	+	.	expr "2.1190986086"; transcript_id "33.T26"; ref "0"; sample_id "33";
chr1	Cufflinks	transcript	960910	976706	384	+	.	expr "0.8142820179"; transcript_id "33.T25"; ref "0"; sample_id "33";
chr1	Cufflinks	exon	960910	960921	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	960910	960921	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	transcript	961275	966971	1000	+	.	expr "4.3807676146"; transcript_id "7.T37"; ref "0"; sample_id "7";
chr1	Cufflinks	transcript	961275	976670	447	+	.	expr "1.9583777641"; transcript_id "7.T38"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	961275	961552	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	961275	961552	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	transcript	961277	964536	1000	.	.	expr "1.2235821540"; transcript_id "54.T38"; ref "0"; sample_id "54";
chr1	Cufflinks	transcript	961277	972147	1000	+	.	expr "2.4848671126"; transcript_id "9.T27"; ref "0"; sample_id "9";
chr1	Cufflinks	exon	961277	961552	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	961277	964536	1000	.	.	transcript_id "54.T38";
chr1	Cufflinks	transcript	961278	972413	553	+	.	expr "1.7332638828"; transcript_id "10.T36"; ref "0"; sample_id "10";
chr1	Cufflinks	exon	961278	961552	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	transcript	961286	964502	1000	.	.	expr "1.2877833763"; transcript_id "10.T38"; ref "0"; sample_id "10";
chr1	Cufflinks	exon	961286	964502	1000	.	.	transcript_id "10.T38";
chr1	Cufflinks	exon	961293	961552	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	961293	961552	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	961293	961552	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	961293	961552	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	961293	961552	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	961293	961552	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	961293	961552	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	961293	961552	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	961293	961552	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	961293	961552	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	961293	961552	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	961293	961552	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	961293	961552	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	961293	961552	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	961293	961552	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	961293	961552	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	961293	961552	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	961293	961552	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	961293	961750	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	961293	961750	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	961293	962047	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	961293	962047	160	+	.	transcript_id "18.T45";
chr1	Cufflinks	exon	961293	962047	528	+	.	transcript_id "27.T51";
chr1	Cufflinks	exon	961293	962471	665	+	.	transcript_id "47.T98";
chr1	HAVANA	exon	961293	961552	.	+	.	transcript_id "R.T173";
chr1	Cufflinks	transcript	961294	968840	839	+	.	expr "1.7554299087"; transcript_id "17.T41"; ref "0"; sample_id "17";
chr1	Cufflinks	transcript	961294	975525	1000	+	.	expr "2.0918055598"; transcript_id "17.T42"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	961294	961552	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	961294	961552	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	transcript	961295	975862	790	+	.	expr "0.9936779684"; transcript_id "3.T40"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	961295	961552	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	961300	961552	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	transcript	961303	966936	1000	+	.	expr "1.7293102155"; transcript_id "45.T43"; ref "0"; sample_id "45";
chr1	Cufflinks	transcript	961303	970886	566	+	.	expr "0.9794387981"; transcript_id "45.T44"; ref "0"; sample_id "45";
chr1	Cufflinks	transcript	961303	970886	953	+	.	expr "1.6494449824"; transcript_id "45.T45"; ref "0"; sample_id "45";
chr1	Cufflinks	exon	961303	961552	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	961303	961552	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	961303	961552	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	transcript	961305	965941	486	+	.	expr "0.8230539116"; transcript_id "26.T49"; ref "0"; sample_id "26";
chr1	Cufflinks	transcript	961305	965941	667	+	.	expr "1.1308062822"; transcript_id "26.T50"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	961305	961552	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	961305	961552	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	transcript	961306	972425	1000	+	.	expr "2.7117682943"; transcript_id "38.T40"; ref "0"; sample_id "38";
chr1	Cufflinks	exon	961306	961552	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	transcript	961307	964976	1000	+	.	expr "3.1123877826"; transcript_id "22.T43"; ref "0"; sample_id "22";
chr1	Cufflinks	transcript	961307	964976	763	+	.	expr "2.3759262671"; transcript_id "22.T42"; ref "0"; sample_id "22";
chr1	Cufflinks	exon	961307	961552	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	961307	961552	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	transcript	961310	965077	1000	+	.	expr "1.8503426069"; transcript_id "4.T60"; ref "0"; sample_id "4";
chr1	Cufflinks	transcript	961310	965836	1000	+	.	expr "2.1059546011"; transcript_id "14.T52"; ref "0"; sample_id "14";
chr1	Cufflinks	transcript	961310	965836	463	+	.	expr "0.9750655819"; transcript_id "14.T51"; ref "0"; sample_id "14";
chr1	Cufflinks	transcript	961310	976262	266	+	.	expr "0.4934294115"; transcript_id "4.T61"; ref "0"; sample_id "4";
chr1	Cufflinks	transcript	961310	976548	374	+	.	expr "0.6931010628"; transcript_id "4.T62"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	961310	961552	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	961310	961552	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	961310	961552	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	961310	961552	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	961310	961552	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	transcript	961321	975876	1000	+	.	expr "2.0758773662"; transcript_id "39.T33"; ref "0"; sample_id "39";
chr1	Cufflinks	transcript	961321	975876	530	+	.	expr "1.1010388290"; transcript_id "39.T34"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	961321	961552	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	961321	961552	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	transcript	961331	971006	1000	+	.	expr "2.2102855357"; transcript_id "54.T39"; ref "0"; sample_id "54";
chr1	Cufflinks	transcript	961331	971340	422	+	.	expr "0.9336677709"; transcript_id "54.T40"; ref "0"; sample_id "54";
chr1	Cufflinks	exon	961331	961552	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	961331	961552	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	transcript	961367	975883	494	+	.	expr "0.6526457811"; transcript_id "52.T54"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	961367	961552	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	transcript	961370	974510	1000	+	.	expr "3.4606699465"; transcript_id "32.T58"; ref "0"; sample_id "32";
chr1	Cufflinks	exon	961370	961552	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	transcript	961378	965941	375	+	.	expr "0.6359239589"; transcript_id "26.T51"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	961378	961750	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	transcript	961390	967346	1000	+	.	expr "1.1673016098"; transcript_id "19.T33"; ref "0"; sample_id "19";
chr1	Cufflinks	exon	961390	961552	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	transcript	961395	975428	1000	+	.	expr "4.6258350299"; transcript_id "43.T40"; ref "0"; sample_id "43";
chr1	Cufflinks	transcript	961395	975883	1000	+	.	expr "1.3196652057"; transcript_id "52.T55"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	961395	961552	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	961395	962047	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	transcript	961401	971006	695	+	.	expr "1.5365545851"; transcript_id "54.T41"; ref "0"; sample_id "54";
chr1	Cufflinks	exon	961401	962047	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	transcript	961410	966956	896	+	.	expr "1.8620247079"; transcript_id "39.T35"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	961410	961750	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	transcript	961417	975335	850	+	.	expr "0.9924509274"; transcript_id "19.T34"; ref "0"; sample_id "19";
chr1	Cufflinks	exon	961417	961750	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	transcript	961419	966994	847	+	.	expr "1.5680698555"; transcript_id "4.T63"; ref "0"; sample_id "4";
chr1	Cufflinks	exon	961419	961750	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	transcript	961422	966183	1000	+	.	expr "1.6880736756"; transcript_id "27.T52"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	961422	961750	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	transcript	961433	966936	715	+	.	expr "0.8983063461"; transcript_id "3.T42"; ref "0"; sample_id "3";
chr1	Cufflinks	transcript	961433	966936	870	+	.	expr "1.0936722562"; transcript_id "3.T41"; ref "0"; sample_id "3";
chr1	Cufflinks	transcript	961433	975855	1000	+	.	expr "3.1353639174"; transcript_id "40.T36"; ref "0"; sample_id "40";
chr1	Cufflinks	exon	961433	961750	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	961433	961750	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	961433	962471	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	transcript	961435	976712	1000	+	.	expr "1.8737897454"; transcript_id "44.T44"; ref "0"; sample_id "44";
chr1	Cufflinks	exon	961435	961552	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	transcript	961442	975856	1000	+	.	expr "3.5392071772"; transcript_id "50.T50"; ref "0"; sample_id "50";
chr1	Cufflinks	exon	961442	962047	1000	+	.	transcript_id "50.T50";
chr1	HAVANA	transcript	961449	962478	.	+	.	expr "0.0"; transcript_id "R.T175"; ref "1"; sample_id "R";
chr1	HAVANA	exon	961449	961750	.	+	.	transcript_id "R.T175";
chr1	Cufflinks	transcript	961463	973637	954	+	.	expr "1.2591162077"; transcript_id "52.T56"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	961463	962047	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	transcript	961474	965636	1000	+	.	expr "6.0904089079"; transcript_id "16.T121"; ref "0"; sample_id "16";
chr1	Cufflinks	transcript	961474	975291	472	+	.	expr "2.8773962393"; transcript_id "16.T122"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	961474	961552	1000	+	.	transcript_id "16.T121";
chr1	Cufflinks	exon	961474	961552	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	transcript	961488	966965	796	+	.	expr "2.6228137305"; transcript_id "35.T32"; ref "0"; sample_id "35";
chr1	Cufflinks	transcript	961488	975452	1000	+	.	expr "3.2946129746"; transcript_id "35.T33"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	961488	961750	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	961488	962047	796	+	.	transcript_id "35.T32";
chr1	Cufflinks	transcript	961499	974461	535	+	.	expr "0.4226764292"; transcript_id "37.T21"; ref "0"; sample_id "37";
chr1	Cufflinks	exon	961499	961750	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	transcript	961594	975291	447	+	.	expr "2.7227755595"; transcript_id "16.T123"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	961594	961750	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	transcript	961604	975366	612	+	.	expr "0.9011316326"; transcript_id "1.T49"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	961604	962471	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	961629	961729	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	961629	961750	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	961629	961750	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	961629	961750	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	961629	961750	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	961629	961750	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	961629	961750	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	961629	961750	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	961629	961750	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	961629	961750	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	961629	961750	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	961629	961750	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	961629	961750	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	961629	961750	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	961629	961750	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	961629	961750	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	961629	961750	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	961629	961750	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	961629	961750	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	961629	961750	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	961629	961750	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	961629	961750	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	961629	961750	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	961629	961750	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	961629	961750	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	961629	961750	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	961629	961750	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	961629	961750	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	961629	962047	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	961629	962047	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	961629	962047	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	961629	962471	1000	+	.	transcript_id "16.T121";
chr1	Cufflinks	exon	961629	962471	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	961629	962471	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	961629	962471	739	+	.	transcript_id "21.T41";
chr1	HAVANA	exon	961629	961750	.	+	.	transcript_id "R.T173";
chr1	Cufflinks	transcript	961657	964176	506	+	.	expr "1.8406001467"; transcript_id "47.T99"; ref "0"; sample_id "47";
chr1	Cufflinks	transcript	961657	965699	1000	+	.	expr "3.6350441576"; transcript_id "47.T100"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	961657	962471	1000	+	.	transcript_id "47.T100";
chr1	Cufflinks	exon	961657	962917	506	+	.	transcript_id "47.T99";
chr1	Cufflinks	transcript	961663	965699	624	+	.	expr "2.2706962674"; transcript_id "47.T101"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	961663	961750	624	+	.	transcript_id "47.T101";
chr1	Cufflinks	exon	961826	961980	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	961826	961980	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	961826	962047	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	961826	962047	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	961826	962047	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	exon	961826	962047	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	961826	962047	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	961826	962047	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	961826	962047	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	961826	962047	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	961826	962047	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	961826	962047	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	961826	962047	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	961826	962047	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	961826	962047	624	+	.	transcript_id "47.T101";
chr1	Cufflinks	exon	961826	962047	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	961826	962047	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	961826	962047	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	961826	962047	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	961826	962047	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	961826	962047	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	961826	962047	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	961826	962047	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	961826	962047	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	961826	962047	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	961826	962047	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	961826	962047	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	961826	962047	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	961826	962471	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	961826	962471	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	961826	962471	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	961826	962471	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	961826	962471	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	961826	962471	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	961826	962471	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	961826	962471	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	961826	962471	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	961826	962471	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	961826	962471	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	961826	962471	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	961826	962471	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	961826	962471	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	961826	962471	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	961826	962471	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	961826	962917	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	961826	962917	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	961826	962917	715	+	.	transcript_id "3.T42";
chr1	HAVANA	exon	961826	962047	.	+	.	transcript_id "R.T173";
chr1	HAVANA	exon	961826	962478	.	+	.	transcript_id "R.T175";
chr1	ENSEMBL	exon	962082	962471	.	+	.	transcript_id "R.T174";
chr1	Cufflinks	transcript	962120	976233	572	+	.	expr "0.9684364812"; transcript_id "55.T47"; ref "0"; sample_id "55";
chr1	Cufflinks	exon	962120	962471	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	962139	962471	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	transcript	962149	965941	430	+	.	expr "0.7283522799"; transcript_id "26.T52"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	962149	962917	430	+	.	transcript_id "26.T52";
chr1	Cufflinks	transcript	962153	964285	494	+	.	expr "1.0420193383"; transcript_id "14.T53"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	962153	962471	494	+	.	transcript_id "14.T53";
chr1	Cufflinks	transcript	962175	975464	1000	+	.	expr "1.5405161967"; transcript_id "23.T32"; ref "0"; sample_id "23";
chr1	Cufflinks	exon	962175	962471	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	transcript	962243	975974	436	+	.	expr "0.6238303441"; transcript_id "34.T36"; ref "0"; sample_id "34";
chr1	Cufflinks	exon	962243	964008	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	962286	962471	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	962286	962471	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	962286	962471	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	962286	962471	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	962286	962917	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	962355	962471	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	962355	962471	160	+	.	transcript_id "18.T45";
chr1	Cufflinks	exon	962355	962471	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	962355	962471	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	962355	962471	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	962355	962471	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	962355	962471	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	962355	962471	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	962355	962471	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	962355	962471	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	962355	962471	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	962355	962471	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	962355	962471	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	962355	962471	624	+	.	transcript_id "47.T101";
chr1	Cufflinks	exon	962355	962471	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	962355	962471	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	962355	962471	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	962355	962471	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	962355	962471	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	962355	962471	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	962355	962471	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	962355	962471	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	962355	962471	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	962355	962471	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	962355	962471	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	962355	962471	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	962355	962917	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	exon	962355	962917	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	962355	962917	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	962355	962917	796	+	.	transcript_id "35.T32";
chr1	Cufflinks	exon	962355	963253	528	+	.	transcript_id "27.T51";
chr1	HAVANA	exon	962355	962471	.	+	.	transcript_id "R.T173";
chr1	Cufflinks	transcript	962358	966183	521	+	.	expr "0.8796791176"; transcript_id "27.T53"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	962358	962471	521	+	.	transcript_id "27.T53";
chr1	Cufflinks	transcript	962362	965699	648	+	.	expr "2.3573114634"; transcript_id "47.T102"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	962362	962471	648	+	.	transcript_id "47.T102";
chr1	Cufflinks	exon	962616	962917	1000	+	.	transcript_id "16.T121";
chr1	Cufflinks	transcript	962696	976670	576	+	.	expr "2.5268899393"; transcript_id "7.T39"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	962696	962917	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	transcript	962698	975774	805	+	.	expr "2.8468681699"; transcript_id "15.T18"; ref "0"; sample_id "15";
chr1	Cufflinks	exon	962698	962917	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	transcript	962704	975883	378	+	.	expr "0.4990812379"; transcript_id "52.T57"; ref "0"; sample_id "52";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "47.T100";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	962704	962917	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	962704	962917	160	+	.	transcript_id "18.T45";
chr1	Cufflinks	exon	962704	962917	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	962704	962917	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	962704	962917	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	962704	962917	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	962704	962917	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	962704	962917	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	962704	962917	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	962704	962917	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	962704	962917	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	962704	962917	494	+	.	transcript_id "14.T53";
chr1	Cufflinks	exon	962704	962917	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	962704	962917	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	962704	962917	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	962704	962917	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	962704	962917	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	962704	962917	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	962704	962917	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	962704	962917	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	962704	962917	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	962704	962917	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	962704	962917	648	+	.	transcript_id "47.T102";
chr1	Cufflinks	exon	962704	962917	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	962704	962917	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	962704	962917	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	962704	962917	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	962704	962917	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	962704	962917	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	962704	962917	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	962704	962917	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	962704	962917	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	962704	962917	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	962704	962917	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	962704	962917	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	962704	962917	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	962704	962917	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	962704	962917	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	962704	962917	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	962704	962917	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	962704	962917	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	962704	962917	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	962704	962918	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	962704	963253	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	962704	963253	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	962704	963253	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	962704	963253	521	+	.	transcript_id "27.T53";
chr1	Cufflinks	exon	962704	963504	665	+	.	transcript_id "47.T98";
chr1	Cufflinks	exon	962704	964008	624	+	.	transcript_id "47.T101";
chr1	Cufflinks	exon	962704	964008	957	+	.	transcript_id "51.T69";
chr1	ENSEMBL	exon	962704	962917	.	+	.	transcript_id "R.T174";
chr1	HAVANA	exon	962704	962917	.	+	.	transcript_id "R.T173";
chr1	Cufflinks	transcript	962706	966183	738	+	.	expr "1.2464121144"; transcript_id "27.T54"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	962706	962917	738	+	.	transcript_id "27.T54";
chr1	HAVANA	transcript	962727	964530	.	+	.	expr "0.0"; transcript_id "R.T176"; ref "1"; sample_id "R";
chr1	HAVANA	exon	962727	962917	.	+	.	transcript_id "R.T176";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	963032	963253	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	963032	963253	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	963032	963253	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	963032	963253	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	963032	963253	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	963032	963253	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	963032	963253	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	963032	963253	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	963032	963253	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	963032	963253	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	963032	963253	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	963032	963253	738	+	.	transcript_id "27.T54";
chr1	Cufflinks	exon	963032	963504	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	963032	963758	160	+	.	transcript_id "18.T45";
chr1	Cufflinks	exon	963032	964008	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	963032	964008	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	963032	964008	494	+	.	transcript_id "14.T53";
chr1	Cufflinks	exon	963032	964008	506	+	.	transcript_id "47.T99";
chr1	Cufflinks	exon	963032	964008	796	+	.	transcript_id "35.T32";
chr1	Cufflinks	exon	963032	964008	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	963032	964008	870	+	.	transcript_id "3.T41";
chr1	HAVANA	exon	963032	963253	.	+	.	transcript_id "R.T176";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "47.T100";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	963109	963253	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	963109	963253	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	963109	963253	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	exon	963109	963253	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	963109	963253	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	963109	963253	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	963109	963253	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	963109	963253	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	963109	963253	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	963109	963253	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	963109	963253	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	963109	963253	648	+	.	transcript_id "47.T102";
chr1	Cufflinks	exon	963109	963253	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	963109	963253	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	963109	963253	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	963109	963253	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	963109	963253	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	963109	963253	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	963109	963253	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	963109	963253	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	963109	963253	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	963109	963253	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	963109	963253	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	963109	963253	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	963109	963253	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	963109	963253	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	963109	963253	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	963109	963253	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	963109	963504	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	963109	963504	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	963109	963504	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	963109	963504	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	963109	963504	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	963109	964008	1000	+	.	transcript_id "16.T121";
chr1	Cufflinks	exon	963109	964008	430	+	.	transcript_id "26.T52";
chr1	Cufflinks	exon	963109	964008	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	963109	964008	731	+	.	transcript_id "55.T45";
chr1	ENSEMBL	exon	963109	963253	.	+	.	transcript_id "R.T174";
chr1	HAVANA	exon	963109	963253	.	+	.	transcript_id "R.T173";
chr1	Cufflinks	exon	963110	964008	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	transcript	963313	973900	676	+	.	expr "1.2684184427"; transcript_id "44.T45"; ref "0"; sample_id "44";
chr1	Cufflinks	exon	963313	963504	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	transcript	963327	975291	480	+	.	expr "2.9236282769"; transcript_id "16.T124"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	963327	963504	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "47.T100";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	963337	963504	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	963337	963504	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	963337	963504	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	963337	963504	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	963337	963504	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	exon	963337	963504	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	963337	963504	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	963337	963504	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	963337	963504	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	963337	963504	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	963337	963504	528	+	.	transcript_id "27.T51";
chr1	Cufflinks	exon	963337	963504	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	963337	963504	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	963337	963504	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	963337	963504	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	963337	963504	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	963337	963504	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	963337	963504	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	963337	963504	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	963337	963504	738	+	.	transcript_id "27.T54";
chr1	Cufflinks	exon	963337	963504	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	963337	963504	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	963337	963504	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	963337	963504	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	963337	963504	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	963337	963504	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	963337	963504	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	963337	964008	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	963337	964008	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	963337	964008	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	963337	964008	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	963337	964008	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	963337	964008	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	963337	964008	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	963337	964008	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	963337	964008	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	963337	964008	521	+	.	transcript_id "27.T53";
chr1	Cufflinks	exon	963337	964008	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	963337	964008	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	963337	964008	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	963337	964008	648	+	.	transcript_id "47.T102";
chr1	Cufflinks	exon	963337	964008	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	963337	964008	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	963337	964008	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	963337	964008	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	963337	964008	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	963337	964008	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	963337	964008	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	963337	964008	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	963337	964530	472	+	.	transcript_id "16.T122";
chr1	ENSEMBL	exon	963337	963504	.	+	.	transcript_id "R.T174";
chr1	HAVANA	exon	963337	963504	.	+	.	transcript_id "R.T173";
chr1	HAVANA	exon	963337	963504	.	+	.	transcript_id "R.T176";
chr1	HAVANA	transcript	963552	964164	.	+	.	expr "0.0"; transcript_id "R.T177"; ref "1"; sample_id "R";
chr1	HAVANA	exon	963552	964008	.	+	.	transcript_id "R.T177";
chr1	Cufflinks	transcript	963865	965558	1000	+	.	expr "3.3692987853"; transcript_id "18.T49"; ref "0"; sample_id "18";
chr1	Cufflinks	exon	963865	964008	1000	+	.	transcript_id "18.T49";
chr1	Cufflinks	exon	963919	964008	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "47.T100";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	963920	964008	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	963920	964008	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	963920	964008	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	963920	964008	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	963920	964008	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	exon	963920	964008	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	963920	964008	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	963920	964008	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	963920	964008	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	963920	964008	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	963920	964008	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	963920	964008	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	963920	964008	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	963920	964008	528	+	.	transcript_id "27.T51";
chr1	Cufflinks	exon	963920	964008	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	963920	964008	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	963920	964008	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	963920	964008	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	963920	964008	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	963920	964008	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	963920	964008	665	+	.	transcript_id "47.T98";
chr1	Cufflinks	exon	963920	964008	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	963920	964008	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	963920	964008	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	963920	964008	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	963920	964008	738	+	.	transcript_id "27.T54";
chr1	Cufflinks	exon	963920	964008	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	963920	964008	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	963920	964008	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	963920	964008	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	963920	964008	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	963920	964008	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	963920	964008	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	963920	964008	954	+	.	transcript_id "52.T56";
chr1	ENSEMBL	exon	963920	964008	.	+	.	transcript_id "R.T174";
chr1	HAVANA	exon	963920	964008	.	+	.	transcript_id "R.T173";
chr1	HAVANA	exon	963920	964008	.	+	.	transcript_id "R.T176";
chr1	Cufflinks	transcript	963926	975862	1000	+	.	expr "1.2563676451"; transcript_id "3.T43"; ref "0"; sample_id "3";
chr1	Cufflinks	exon	963926	964008	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	964107	964167	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	964107	964167	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	964107	964167	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	964107	964167	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	964107	964167	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	964107	964167	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	964107	964167	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	964107	964167	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	964107	964167	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	964107	964167	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	964107	964167	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	964107	964167	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	964107	964167	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	964107	964167	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	964107	964167	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	964107	964167	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	964107	964167	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	964107	964167	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	964107	964167	738	+	.	transcript_id "27.T54";
chr1	Cufflinks	exon	964107	964167	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	964107	964167	796	+	.	transcript_id "35.T32";
chr1	Cufflinks	exon	964107	964167	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	964107	964167	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	964107	964167	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	964107	964167	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	964107	964167	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	964107	964167	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	964107	964169	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	964107	964176	506	+	.	transcript_id "47.T99";
chr1	Cufflinks	exon	964107	964176	665	+	.	transcript_id "47.T98";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "16.T121";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "18.T49";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	964107	964180	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	964107	964180	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	964107	964180	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	964107	964180	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	964107	964180	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	964107	964180	521	+	.	transcript_id "27.T53";
chr1	Cufflinks	exon	964107	964180	528	+	.	transcript_id "27.T51";
chr1	Cufflinks	exon	964107	964180	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	964107	964180	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	964107	964180	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	964107	964180	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	964107	964180	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	964107	964180	624	+	.	transcript_id "47.T101";
chr1	Cufflinks	exon	964107	964180	648	+	.	transcript_id "47.T102";
chr1	Cufflinks	exon	964107	964180	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	964107	964180	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	964107	964180	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	964107	964180	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	964107	964180	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	964107	964180	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	964107	964180	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	964107	964180	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	964107	964180	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	964107	964180	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	964107	964180	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	964107	964180	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	964107	964180	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	964107	964180	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	964107	964181	430	+	.	transcript_id "26.T52";
chr1	Cufflinks	exon	964107	964183	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	964107	964285	494	+	.	transcript_id "14.T53";
chr1	Cufflinks	exon	964107	964530	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	964107	964530	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	964107	964530	1000	+	.	transcript_id "47.T100";
chr1	Cufflinks	exon	964107	964530	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	exon	964107	964530	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	964107	964530	439	+	.	transcript_id "35.T31";
chr1	ENSEMBL	exon	964107	964167	.	+	.	transcript_id "R.T174";
chr1	HAVANA	exon	964107	964164	.	+	.	transcript_id "R.T177";
chr1	HAVANA	exon	964107	964167	.	+	.	transcript_id "R.T176";
chr1	HAVANA	exon	964107	964180	.	+	.	transcript_id "R.T173";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "16.T121";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "18.T49";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	964349	964530	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	964349	964530	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	964349	964530	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	964349	964530	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	964349	964530	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	964349	964530	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	964349	964530	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	964349	964530	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	964349	964530	430	+	.	transcript_id "26.T52";
chr1	Cufflinks	exon	964349	964530	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	964349	964530	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	964349	964530	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	964349	964530	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	964349	964530	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	964349	964530	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	964349	964530	521	+	.	transcript_id "27.T53";
chr1	Cufflinks	exon	964349	964530	528	+	.	transcript_id "27.T51";
chr1	Cufflinks	exon	964349	964530	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	964349	964530	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	964349	964530	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	964349	964530	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	964349	964530	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	964349	964530	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	964349	964530	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	964349	964530	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	964349	964530	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	964349	964530	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	964349	964530	624	+	.	transcript_id "47.T101";
chr1	Cufflinks	exon	964349	964530	648	+	.	transcript_id "47.T102";
chr1	Cufflinks	exon	964349	964530	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	964349	964530	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	964349	964530	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	964349	964530	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	964349	964530	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	964349	964530	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	964349	964530	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	964349	964530	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	964349	964530	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	964349	964530	738	+	.	transcript_id "27.T54";
chr1	Cufflinks	exon	964349	964530	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	964349	964530	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	964349	964530	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	964349	964530	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	964349	964530	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	964349	964530	796	+	.	transcript_id "35.T32";
chr1	Cufflinks	exon	964349	964530	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	964349	964530	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	964349	964530	839	+	.	transcript_id "17.T41";
chr1	Cufflinks	exon	964349	964530	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	964349	964530	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	964349	964530	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	964349	964530	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	964349	964530	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	964349	964530	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	964349	964530	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	964349	964530	961	+	.	transcript_id "34.T34";
chr1	ENSEMBL	exon	964349	964530	.	+	.	transcript_id "R.T174";
chr1	HAVANA	exon	964349	964530	.	+	.	transcript_id "R.T173";
chr1	HAVANA	exon	964349	964530	.	+	.	transcript_id "R.T176";
chr1	Cufflinks	transcript	964776	976667	1000	-	.	expr "1.0423050511"; transcript_id "46.T45"; ref "0"; sample_id "46";
chr1	Cufflinks	exon	964776	976269	1000	-	.	transcript_id "46.T45";
chr1	Cufflinks	transcript	964842	976672	1000	-	.	expr "0.9981914425"; transcript_id "32.T59"; ref "0"; sample_id "32";
chr1	Cufflinks	transcript	964842	976693	456	-	.	expr "0.4555354229"; transcript_id "32.T60"; ref "0"; sample_id "32";
chr1	Cufflinks	exon	964842	976269	1000	-	.	transcript_id "32.T59";
chr1	Cufflinks	exon	964842	976269	456	-	.	transcript_id "32.T60";
chr1	Cufflinks	transcript	964953	970217	1000	.	.	expr "0.8963090019"; transcript_id "9.T28"; ref "0"; sample_id "9";
chr1	Cufflinks	exon	964953	970217	1000	.	.	transcript_id "9.T28";
chr1	Cufflinks	exon	964963	964976	1000	+	.	transcript_id "22.T43";
chr1	Cufflinks	exon	964963	964976	763	+	.	transcript_id "22.T42";
chr1	Cufflinks	exon	964963	965077	1000	+	.	transcript_id "4.T60";
chr1	Cufflinks	exon	964963	965558	1000	+	.	transcript_id "18.T49";
chr1	Cufflinks	exon	964963	965558	224	+	.	transcript_id "18.T47";
chr1	Cufflinks	exon	964963	965558	396	+	.	transcript_id "18.T46";
chr1	Cufflinks	exon	964963	965558	552	+	.	transcript_id "18.T48";
chr1	Cufflinks	exon	964963	965636	1000	+	.	transcript_id "16.T121";
chr1	Cufflinks	exon	964963	965699	1000	+	.	transcript_id "47.T100";
chr1	Cufflinks	exon	964963	965699	624	+	.	transcript_id "47.T101";
chr1	Cufflinks	exon	964963	965699	648	+	.	transcript_id "47.T102";
chr1	Cufflinks	exon	964963	965836	1000	+	.	transcript_id "14.T52";
chr1	Cufflinks	exon	964963	965836	463	+	.	transcript_id "14.T51";
chr1	Cufflinks	exon	964963	965941	1000	+	.	transcript_id "26.T48";
chr1	Cufflinks	exon	964963	965941	375	+	.	transcript_id "26.T51";
chr1	Cufflinks	exon	964963	965941	430	+	.	transcript_id "26.T52";
chr1	Cufflinks	exon	964963	965941	486	+	.	transcript_id "26.T49";
chr1	Cufflinks	exon	964963	965941	667	+	.	transcript_id "26.T50";
chr1	Cufflinks	exon	964963	966183	1000	+	.	transcript_id "27.T52";
chr1	Cufflinks	exon	964963	966183	521	+	.	transcript_id "27.T53";
chr1	Cufflinks	exon	964963	966183	528	+	.	transcript_id "27.T51";
chr1	Cufflinks	exon	964963	966183	738	+	.	transcript_id "27.T54";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "19.T33";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	964963	966614	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	964963	966614	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	964963	966614	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	964963	966614	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	964963	966614	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	964963	966614	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	964963	966614	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	964963	966614	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	964963	966614	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	964963	966614	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	964963	966614	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	964963	966614	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	964963	966614	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	964963	966614	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	964963	966614	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	964963	966614	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	964963	966614	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	964963	966614	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	964963	966614	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	964963	966614	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	964963	966614	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	964963	966614	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	964963	966614	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	964963	966614	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	964963	966614	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	964963	966614	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	964963	966614	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	964963	966614	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	964963	966614	796	+	.	transcript_id "35.T32";
chr1	Cufflinks	exon	964963	966614	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	964963	966614	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	964963	966614	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	964963	966614	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	964963	966614	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	964963	966614	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	964963	966614	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	964963	966614	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	964963	966614	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	964963	966614	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	964963	966773	1000	+	.	transcript_id "49.T40";
chr1	Cufflinks	exon	964963	966773	697	+	.	transcript_id "49.T39";
chr1	Cufflinks	exon	964963	966803	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	964963	966803	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	964963	966803	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	964963	966803	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	964963	966803	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	964963	966803	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	964963	966803	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	964963	966803	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	964963	966969	729	+	.	transcript_id "11.T23";
chr1	Cufflinks	exon	964963	966971	550	+	.	transcript_id "21.T40";
chr1	Cufflinks	exon	964963	968840	839	+	.	transcript_id "17.T41";
chr1	ENSEMBL	exon	964963	965602	.	+	.	transcript_id "R.T174";
chr1	HAVANA	exon	964963	965715	.	+	.	transcript_id "R.T173";
chr1	ENSEMBL	transcript	965110	965166	.	+	.	expr "0.0"; transcript_id "R.T178"; ref "1"; sample_id "R";
chr1	ENSEMBL	exon	965110	965166	.	+	.	transcript_id "R.T178";
chr1	Cufflinks	transcript	966322	975763	1000	+	.	expr "4.5075654008"; transcript_id "47.T111"; ref "0"; sample_id "47";
chr1	Cufflinks	transcript	966322	975763	381	+	.	expr "1.7217681499"; transcript_id "47.T110"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	966322	966614	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	966322	966614	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	transcript	966360	970424	1000	.	.	expr "0.4950710069"; transcript_id "53.T48"; ref "0"; sample_id "53";
chr1	Cufflinks	transcript	966360	975424	1000	+	.	expr "1.6849471673"; transcript_id "53.T50"; ref "0"; sample_id "53";
chr1	Cufflinks	transcript	966360	975424	595	+	.	expr "1.0029512491"; transcript_id "53.T49"; ref "0"; sample_id "53";
chr1	Cufflinks	exon	966360	966614	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	966360	966614	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	966360	970424	1000	.	.	transcript_id "53.T48";
chr1	Cufflinks	transcript	966458	976093	1000	+	.	expr "1.0195876656"; transcript_id "18.T42"; ref "0"; sample_id "18";
chr1	Cufflinks	transcript	966458	976166	1000	+	.	expr "2.7033399322"; transcript_id "26.T47"; ref "0"; sample_id "26";
chr1	Cufflinks	exon	966458	966614	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	966458	966614	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	transcript	966480	976189	1000	+	.	expr "0.7753572074"; transcript_id "27.T46"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	966480	966614	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	transcript	966490	975946	1000	+	.	expr "3.1298594046"; transcript_id "10.T37"; ref "0"; sample_id "10";
chr1	Cufflinks	exon	966490	966614	1000	+	.	transcript_id "10.T37";
chr1	HAVANA	transcript	966497	975108	.	+	.	expr "0.0"; transcript_id "R.T179"; ref "1"; sample_id "R";
chr1	HAVANA	exon	966497	966614	.	+	.	transcript_id "R.T179";
chr1	Cufflinks	transcript	966501	973375	816	+	.	expr "0.4699034135"; transcript_id "8.T53"; ref "0"; sample_id "8";
chr1	Cufflinks	transcript	966501	975678	1000	+	.	expr "0.4717214819"; transcript_id "14.T47"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	966501	966614	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	966501	966614	816	+	.	transcript_id "8.T53";
chr1	HAVANA	transcript	966502	975008	.	+	.	expr "0.0"; transcript_id "R.T180"; ref "1"; sample_id "R";
chr1	HAVANA	transcript	966502	975008	.	+	.	expr "0.0"; transcript_id "R.T181"; ref "1"; sample_id "R";
chr1	HAVANA	exon	966502	966614	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	966502	966614	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	transcript	966503	973507	264	+	.	expr "0.1520846347"; transcript_id "8.T54"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	966503	966614	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	966704	966803	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	966704	966803	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	966704	966803	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	966704	966803	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	966704	966803	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	966704	966803	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	966704	966803	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	966704	966803	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	966704	966803	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	966704	966803	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	966704	966803	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	966704	966803	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	966704	966803	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	966704	966803	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	966704	966803	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	966704	966803	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	966704	966803	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	966704	966803	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	966704	966803	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	966704	966803	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	966704	966803	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	966704	966803	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	966704	966803	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	966704	966803	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	966704	966803	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	966704	966803	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	966704	966803	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	966704	966803	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	966704	966803	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	966704	966803	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	966704	966803	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	966704	966803	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	966704	966803	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	966704	966803	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	966704	966803	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	966704	966803	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	966704	966803	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	966704	966936	1000	+	.	transcript_id "45.T43";
chr1	Cufflinks	exon	966704	966936	715	+	.	transcript_id "3.T42";
chr1	Cufflinks	exon	966704	966936	870	+	.	transcript_id "3.T41";
chr1	Cufflinks	exon	966704	966942	1000	+	.	transcript_id "1.T47";
chr1	Cufflinks	exon	966704	966947	786	+	.	transcript_id "23.T31";
chr1	Cufflinks	exon	966704	966956	896	+	.	transcript_id "39.T35";
chr1	Cufflinks	exon	966704	966965	796	+	.	transcript_id "35.T32";
chr1	Cufflinks	exon	966704	966971	1000	+	.	transcript_id "7.T37";
chr1	Cufflinks	exon	966704	966994	847	+	.	transcript_id "4.T63";
chr1	Cufflinks	exon	966704	967346	1000	+	.	transcript_id "19.T33";
chr1	HAVANA	exon	966704	966803	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	966704	966803	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	966704	966803	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	transcript	966904	967333	1000	.	.	expr "1.0361225258"; transcript_id "51.T72"; ref "0"; sample_id "51";
chr1	Cufflinks	exon	966904	967333	1000	.	.	transcript_id "51.T72";
chr1	Cufflinks	transcript	967124	967557	1000	.	.	expr "0.6455703332"; transcript_id "25.T39"; ref "0"; sample_id "25";
chr1	Cufflinks	exon	967124	967557	1000	.	.	transcript_id "25.T39";
chr1	Cufflinks	transcript	967445	967818	1000	.	.	expr "3.7041807743"; transcript_id "16.T126"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	967445	967818	1000	.	.	transcript_id "16.T126";
chr1	Cufflinks	transcript	967450	967719	1000	.	.	expr "2.3879504201"; transcript_id "39.T37"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	967450	967719	1000	.	.	transcript_id "39.T37";
chr1	Cufflinks	transcript	967459	975335	955	+	.	expr "1.1158548299"; transcript_id "19.T35"; ref "0"; sample_id "19";
chr1	Cufflinks	exon	967459	970423	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	transcript	967797	968542	1000	.	.	expr "0.4396601529"; transcript_id "27.T49"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	967797	968542	1000	.	.	transcript_id "27.T49";
chr1	Cufflinks	transcript	967801	975876	637	+	.	expr "1.3224363934"; transcript_id "39.T36"; ref "0"; sample_id "39";
chr1	Cufflinks	exon	967801	970423	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	transcript	967803	969112	1000	.	.	expr "0.6232439626"; transcript_id "35.T34"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	967803	969112	1000	.	.	transcript_id "35.T34";
chr1	Cufflinks	transcript	967922	968792	1000	.	.	expr "0.3476594368"; transcript_id "42.T31"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	967922	968792	1000	.	.	transcript_id "42.T31";
chr1	Cufflinks	transcript	967950	969193	519	.	.	expr "1.4477365108"; transcript_id "16.T127"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	967950	969193	519	.	.	transcript_id "16.T127";
chr1	Cufflinks	transcript	968046	968878	1000	.	.	expr "0.3464435085"; transcript_id "5.T43"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	968046	968878	1000	.	.	transcript_id "5.T43";
chr1	Cufflinks	transcript	968432	976093	216	+	.	expr "0.2211152693"; transcript_id "18.T43"; ref "0"; sample_id "18";
chr1	Cufflinks	exon	968432	970423	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	transcript	968464	970031	1000	.	.	expr "1.8292664777"; transcript_id "28.T34"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	968464	970031	1000	.	.	transcript_id "28.T34";
chr1	Cufflinks	transcript	968481	968607	1000	.	.	expr "129.2083983505"; transcript_id "47.T113"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	968481	968607	1000	.	.	transcript_id "47.T113";
chr1	Cufflinks	transcript	968512	968860	1000	.	.	expr "0.8437035953"; transcript_id "8.T56"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	968512	968860	1000	.	.	transcript_id "8.T56";
chr1	Cufflinks	transcript	968689	968867	1000	.	.	expr "25.0945602897"; transcript_id "47.T114"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	968689	968867	1000	.	.	transcript_id "47.T114";
chr1	Cufflinks	transcript	968703	969020	1000	.	.	expr "2.7868593964"; transcript_id "16.T128"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	968703	969020	1000	.	.	transcript_id "16.T128";
chr1	Cufflinks	transcript	968746	972135	1000	.	.	expr "0.3633267625"; transcript_id "27.T48"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	968746	972135	1000	.	.	transcript_id "27.T48";
chr1	Cufflinks	transcript	969025	976093	203	+	.	expr "0.2075816628"; transcript_id "18.T44"; ref "0"; sample_id "18";
chr1	Cufflinks	exon	969025	970423	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	transcript	969175	970220	1000	.	.	expr "0.3391291060"; transcript_id "5.T44"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	969175	970220	1000	.	.	transcript_id "5.T44";
chr1	Cufflinks	transcript	969612	969853	1000	.	.	expr "15.8304111601"; transcript_id "47.T115"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	969612	969853	1000	.	.	transcript_id "47.T115";
chr1	Cufflinks	transcript	970012	976189	957	+	.	expr "2.5962521018"; transcript_id "38.T41"; ref "0"; sample_id "38";
chr1	Cufflinks	exon	970012	970423	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	transcript	970041	974139	335	+	.	expr "1.5124302771"; transcript_id "47.T112"; ref "0"; sample_id "47";
chr1	Cufflinks	exon	970041	970423	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	transcript	970277	975464	711	+	.	expr "1.0965100377"; transcript_id "23.T33"; ref "0"; sample_id "23";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	970277	970423	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	970277	970423	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	970277	970423	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	970277	970423	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	970277	970423	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	970277	970423	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	970277	970423	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	970277	970423	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	970277	970423	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	970277	970423	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	970277	970423	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	970277	970423	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	970277	970423	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	970277	970423	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	970277	970423	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	970277	970423	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	970277	970423	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	970277	970423	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	970277	970423	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	970277	970423	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	970277	970423	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	970277	970423	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	970277	970423	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	970277	970423	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	970277	970423	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	970277	970423	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	970277	970423	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	970277	970423	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	970277	970423	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	970277	970423	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	970277	970423	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	970277	970423	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	970277	970423	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	970277	970423	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	970277	970423	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	970277	970423	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	970277	970423	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	970277	970423	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	970277	970423	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	970277	970423	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	970277	970423	961	+	.	transcript_id "34.T34";
chr1	HAVANA	exon	970277	970423	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	970277	970423	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	970277	970423	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	970521	970601	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	970521	970601	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	970521	970601	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	970521	970601	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	970521	970601	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	970521	970601	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	970521	970601	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	970521	970601	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	970521	970601	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	970521	970601	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	970521	970601	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	970521	970601	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	970521	970601	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	970521	970601	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	970521	970601	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	970521	970601	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	970521	970601	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	970521	970601	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	970521	970601	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	970521	970601	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	970521	970601	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	970521	970601	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	970521	970601	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	970521	970601	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	970521	970601	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	970521	970601	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	970521	970601	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	970521	970601	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	970521	970601	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	970521	970601	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	970521	970601	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	970521	970601	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	970521	970601	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	970521	970601	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	970521	970601	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	970521	970601	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	970521	970601	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	970521	970601	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	970521	970601	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	970521	970601	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	970521	970601	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	970521	970601	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	970521	970601	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	970521	970601	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	970521	970601	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	970521	970602	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	970521	970602	953	+	.	transcript_id "45.T45";
chr1	HAVANA	exon	970521	970601	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	970521	970601	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	970521	970601	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	transcript	970522	975696	420	+	.	expr "0.1443272232"; transcript_id "5.T45"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	970522	970601	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	transcript	970655	976702	1000	-	.	expr "0.8159064051"; transcript_id "19.T36"; ref "0"; sample_id "19";
chr1	Cufflinks	exon	970655	976269	1000	-	.	transcript_id "19.T36";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	970686	970758	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	970686	970758	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	970686	970758	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	970686	970758	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	970686	970758	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	970686	970758	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	970686	970758	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	970686	970758	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	970686	970758	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	970686	970758	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	970686	970758	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	970686	970758	528	+	.	transcript_id "43.T39";
chr1	Cufflinks	exon	970686	970758	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	970686	970758	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	970686	970758	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	970686	970758	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	970686	970758	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	970686	970758	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	970686	970758	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	970686	970758	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	970686	970758	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	970686	970759	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	970686	970767	739	+	.	transcript_id "21.T41";
chr1	Cufflinks	exon	970686	970886	566	+	.	transcript_id "45.T44";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	970686	971006	1000	+	.	transcript_id "54.T39";
chr1	Cufflinks	exon	970686	971006	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	970686	971006	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	970686	971006	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	970686	971006	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	970686	971006	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	970686	971006	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	970686	971006	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	970686	971006	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	970686	971006	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	970686	971006	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	970686	971006	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	970686	971006	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	970686	971006	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	970686	971006	695	+	.	transcript_id "54.T41";
chr1	Cufflinks	exon	970686	971006	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	970686	971006	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	970686	971006	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	970686	971006	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	970686	971006	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	970686	971006	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	970686	971006	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	970686	971208	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	970686	971208	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	970686	971208	805	+	.	transcript_id "15.T18";
chr1	HAVANA	exon	970686	970758	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	970686	970758	.	+	.	transcript_id "R.T181";
chr1	HAVANA	exon	970686	971006	.	+	.	transcript_id "R.T180";
chr1	Cufflinks	exon	970687	970758	953	+	.	transcript_id "45.T45";
chr1	HAVANA	transcript	970875	971523	.	+	.	expr "0.0"; transcript_id "R.T182"; ref "1"; sample_id "R";
chr1	HAVANA	exon	970875	971006	.	+	.	transcript_id "R.T182";
chr1	Cufflinks	exon	970879	970886	953	+	.	transcript_id "45.T45";
chr1	Cufflinks	exon	970879	970956	961	+	.	transcript_id "34.T34";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	970879	971006	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	970879	971006	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	970879	971006	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	970879	971006	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	970879	971006	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	970879	971006	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	970879	971006	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	970879	971006	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	970879	971006	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	970879	971006	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	970879	971006	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	970879	971006	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	970879	971006	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	970879	971006	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	970879	971006	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	970879	971006	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	970879	971008	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	970879	971008	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	970879	971208	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	970879	971208	374	+	.	transcript_id "4.T62";
chr1	HAVANA	exon	970879	971006	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	970879	971006	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	exon	970880	971006	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	971077	971208	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	971077	971208	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	971077	971208	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	971077	971208	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	971077	971208	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	971077	971208	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	971077	971208	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	971077	971208	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	971077	971208	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	971077	971208	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	971077	971208	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	971077	971208	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	971077	971208	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	971077	971208	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	971077	971208	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	971077	971208	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	971077	971208	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	971077	971208	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	971077	971208	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	971077	971208	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	971077	971208	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	971077	971208	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	971077	971208	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	971077	971208	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	971077	971208	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	971077	971208	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	971077	971208	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	971077	971208	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	971077	971208	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	971077	971208	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	971077	971208	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	971077	971208	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	971077	971208	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	971077	971208	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	971077	971224	711	+	.	transcript_id "23.T33";
chr1	HAVANA	exon	971077	971208	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	971077	971208	.	+	.	transcript_id "R.T181";
chr1	HAVANA	exon	971077	971208	.	+	.	transcript_id "R.T182";
chr1	Cufflinks	exon	971079	971208	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	971079	971208	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	971113	971208	676	+	.	transcript_id "44.T45";
chr1	HAVANA	exon	971113	971208	.	+	.	transcript_id "R.T179";
chr1	Cufflinks	transcript	971183	975696	1000	+	.	expr "0.3435381419"; transcript_id "5.T46"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	971183	971208	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	971323	971404	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	971323	971404	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	971323	971404	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	971324	971340	422	+	.	transcript_id "54.T40";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	971324	971404	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	971324	971404	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	971324	971404	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	971324	971404	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	971324	971404	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	971324	971404	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	971324	971404	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	971324	971404	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	971324	971404	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	971324	971404	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	971324	971404	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	971324	971404	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	971324	971404	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	971324	971404	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	971324	971404	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	971324	971404	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	971324	971404	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	971324	971404	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	971324	971404	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	971324	971404	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	971324	971404	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	971324	971404	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	971324	971404	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	971324	971404	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	971324	971404	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	971324	971404	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	971324	971404	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	971324	971404	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	971324	971404	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	971324	971404	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	971324	971404	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	971324	971404	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	971324	971404	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	971324	971404	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	971324	971404	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	971324	971404	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	971324	971404	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	971324	971404	957	+	.	transcript_id "51.T69";
chr1	HAVANA	exon	971324	971404	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	971324	971404	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	971324	971404	.	+	.	transcript_id "R.T181";
chr1	HAVANA	exon	971324	971523	.	+	.	transcript_id "R.T182";
chr1	Cufflinks	exon	971340	971404	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	transcript	971431	972052	1000	.	.	expr "0.3576678659"; transcript_id "1.T50"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	971431	972052	1000	.	.	transcript_id "1.T50";
chr1	Cufflinks	exon	971510	972150	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	transcript	971521	975696	445	+	.	expr "0.1531589172"; transcript_id "5.T47"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	971521	972150	445	+	.	transcript_id "5.T47";
chr1	Cufflinks	transcript	971545	976189	248	+	.	expr "0.1928258861"; transcript_id "27.T47"; ref "0"; sample_id "27";
chr1	Cufflinks	exon	971545	972150	248	+	.	transcript_id "27.T47";
chr1	Cufflinks	exon	972073	972150	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	972075	972147	1000	+	.	transcript_id "9.T27";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	972075	972150	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	972075	972150	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	972075	972150	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	972075	972150	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	972075	972150	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	972075	972150	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	972075	972150	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	972075	972150	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	972075	972150	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	972075	972150	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	972075	972150	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	972075	972150	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	972075	972150	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	972075	972150	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	972075	972150	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	972075	972150	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	972075	972150	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	972075	972150	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	972075	972150	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	972075	972150	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	972075	972150	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	972075	972150	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	972075	972150	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	972075	972150	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	972075	972150	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	972075	972150	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	972075	972150	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	972075	972150	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	972075	972150	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	972075	972150	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	972075	972150	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	972075	972150	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	972075	972150	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	972075	972150	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	972075	972150	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	972075	972150	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	972075	972150	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	972075	972150	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	972075	972150	957	+	.	transcript_id "51.T69";
chr1	HAVANA	exon	972075	972150	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	972075	972150	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	972075	972150	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	transcript	972083	975880	470	+	.	expr "0.2220873031"; transcript_id "14.T48"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	972083	972150	470	+	.	transcript_id "14.T48";
chr1	Cufflinks	transcript	972084	975880	389	+	.	expr "0.1837325556"; transcript_id "14.T49"; ref "0"; sample_id "14";
chr1	Cufflinks	exon	972084	972150	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	972288	972413	553	+	.	transcript_id "10.T36";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	972288	972424	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	972288	972424	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	972288	972424	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	972288	972424	248	+	.	transcript_id "27.T47";
chr1	Cufflinks	exon	972288	972424	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	972288	972424	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	972288	972424	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	972288	972424	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	972288	972424	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	972288	972424	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	972288	972424	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	972288	972424	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	972288	972424	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	972288	972424	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	972288	972424	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	972288	972424	445	+	.	transcript_id "5.T47";
chr1	Cufflinks	exon	972288	972424	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	972288	972424	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	972288	972424	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	972288	972424	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	972288	972424	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	972288	972424	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	972288	972424	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	972288	972424	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	972288	972424	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	972288	972424	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	972288	972424	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	972288	972424	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	972288	972424	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	972288	972424	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	972288	972424	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	972288	972424	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	972288	972424	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	972288	972424	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	972288	972424	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	972288	972424	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	972288	972424	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	972288	972424	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	972288	972424	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	972288	972424	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	972288	972425	1000	+	.	transcript_id "38.T40";
chr1	Cufflinks	exon	972288	972425	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	972288	972425	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	972288	972425	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	972288	972452	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	972288	972452	470	+	.	transcript_id "14.T48";
chr1	HAVANA	exon	972288	972424	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	972288	972424	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	972288	972424	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	972861	973010	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	972861	973010	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	972861	973010	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	972861	973010	248	+	.	transcript_id "27.T47";
chr1	Cufflinks	exon	972861	973010	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	972861	973010	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	972861	973010	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	972861	973010	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	972861	973010	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	972861	973010	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	972861	973010	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	972861	973010	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	972861	973010	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	972861	973010	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	972861	973010	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	972861	973010	445	+	.	transcript_id "5.T47";
chr1	Cufflinks	exon	972861	973010	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	972861	973010	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	972861	973010	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	972861	973010	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	972861	973010	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	972861	973010	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	972861	973010	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	972861	973010	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	972861	973010	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	972861	973010	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	972861	973010	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	972861	973010	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	972861	973010	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	972861	973010	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	972861	973010	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	972861	973010	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	972861	973010	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	972861	973010	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	972861	973010	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	972861	973010	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	972861	973010	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	972861	973010	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	972861	973010	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	972861	973011	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	972861	973066	1000	+	.	transcript_id "15.T16";
chr1	Cufflinks	exon	972861	973326	1000	+	.	transcript_id "50.T50";
chr1	HAVANA	exon	972861	973010	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	972861	973010	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	972861	973010	.	+	.	transcript_id "R.T181";
chr1	Cufflinks	exon	972862	973010	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	972862	973010	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	972862	973010	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	972889	973010	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	972889	973010	470	+	.	transcript_id "14.T48";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	973186	973326	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	973186	973326	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	973186	973326	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	973186	973326	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	973186	973326	335	+	.	transcript_id "47.T112";
chr1	Cufflinks	exon	973186	973326	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	973186	973326	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	973186	973326	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	973186	973326	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	973186	973326	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	973186	973326	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	973186	973326	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	973186	973326	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	973186	973326	470	+	.	transcript_id "14.T48";
chr1	Cufflinks	exon	973186	973326	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	973186	973326	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	973186	973326	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	973186	973326	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	973186	973326	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	973186	973326	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	973186	973326	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	973186	973326	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	973186	973326	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	973186	973326	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	973186	973326	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	973186	973326	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	973186	973326	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	973186	973326	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	973186	973326	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	973186	973326	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	973186	973326	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	973186	973326	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	973186	973326	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	973186	973326	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	973186	973375	816	+	.	transcript_id "8.T53";
chr1	Cufflinks	exon	973186	973640	248	+	.	transcript_id "27.T47";
chr1	Cufflinks	exon	973186	973640	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	973186	973640	445	+	.	transcript_id "5.T47";
chr1	HAVANA	exon	973186	973326	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	973186	973326	.	+	.	transcript_id "R.T180";
chr1	Cufflinks	exon	973187	973326	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	transcript	973430	974493	1000	+	.	expr "0.5753880691"; transcript_id "8.T55"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	973430	973640	1000	+	.	transcript_id "8.T55";
chr1	Cufflinks	exon	973500	973507	264	+	.	transcript_id "8.T54";
chr1	Cufflinks	exon	973500	973637	954	+	.	transcript_id "52.T56";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	973500	973640	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	973500	973640	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	973500	973640	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	973500	973640	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	973500	973640	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	973500	973640	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	973500	973640	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	973500	973640	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	973500	973640	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	973500	973640	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	973500	973640	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	973500	973640	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	973500	973640	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	973500	973640	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	973500	973640	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	973500	973640	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	973500	973640	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	973500	973640	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	973500	973640	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	973500	973640	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	973500	973640	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	973500	973640	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	973500	973640	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	973500	973640	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	973500	973640	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	973500	973640	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	973500	973640	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	973500	973640	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	973500	973640	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	973500	973641	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	973500	973641	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	973500	973641	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	973500	973641	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	973500	974051	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	973500	974051	447	+	.	transcript_id "16.T123";
chr1	HAVANA	exon	973500	973640	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	973500	973640	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	973500	973640	.	+	.	transcript_id "R.T181";
chr1	HAVANA	transcript	973512	975865	.	+	.	expr "0.0"; transcript_id "R.T183"; ref "1"; sample_id "R";
chr1	HAVANA	exon	973512	973640	.	+	.	transcript_id "R.T183";
chr1	Cufflinks	transcript	973740	975917	1000	.	.	expr "0.2087049945"; transcript_id "5.T48"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	973740	975917	1000	.	.	transcript_id "5.T48";
chr1	Cufflinks	exon	973833	973900	676	+	.	transcript_id "44.T45";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	973833	974051	1000	+	.	transcript_id "8.T55";
chr1	Cufflinks	exon	973833	974051	248	+	.	transcript_id "27.T47";
chr1	Cufflinks	exon	973833	974051	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	973833	974051	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	973833	974051	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	973833	974051	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	973833	974051	384	+	.	transcript_id "33.T25";
chr1	Cufflinks	exon	973833	974051	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	973833	974051	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	973833	974051	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	973833	974051	445	+	.	transcript_id "5.T47";
chr1	Cufflinks	exon	973833	974051	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	973833	974051	470	+	.	transcript_id "14.T48";
chr1	Cufflinks	exon	973833	974051	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	973833	974051	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	973833	974051	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	973833	974051	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	973833	974051	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	973833	974051	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	973833	974051	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	973833	974051	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	973833	974051	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	973833	974051	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	973833	974051	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	973833	974051	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	973833	974051	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	973833	974051	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	973833	974051	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	973833	974051	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	973833	974051	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	973833	974051	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	973833	974051	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	973833	974051	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	973833	974051	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	973833	974051	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	973833	974139	335	+	.	transcript_id "47.T112";
chr1	HAVANA	exon	973833	974051	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	973833	974051	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	973833	974051	.	+	.	transcript_id "R.T181";
chr1	HAVANA	exon	973833	974051	.	+	.	transcript_id "R.T183";
chr1	Cufflinks	exon	973834	974051	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	973834	974051	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	973834	974051	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	973834	974051	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	transcript	974316	976665	1000	-	.	expr "7.5786194475"; transcript_id "16.T125"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "44.T44";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	974316	974364	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	974316	974364	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	974316	974364	248	+	.	transcript_id "27.T47";
chr1	Cufflinks	exon	974316	974364	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	974316	974364	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	974316	974364	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	974316	974364	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	974316	974364	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	974316	974364	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	974316	974364	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	974316	974364	470	+	.	transcript_id "14.T48";
chr1	Cufflinks	exon	974316	974364	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	974316	974364	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	974316	974364	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	974316	974364	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	974316	974364	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	974316	974364	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	974316	974364	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	974316	974364	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	974316	974364	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	974316	974364	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	974316	974364	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	974316	974364	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	974316	974364	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	974316	974364	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	974316	974365	1000	+	.	transcript_id "8.T55";
chr1	Cufflinks	exon	974316	974367	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	974316	974588	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	974316	974588	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	974316	974588	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	974316	975366	612	+	.	transcript_id "1.T49";
chr1	Cufflinks	exon	974316	975424	1000	+	.	transcript_id "53.T50";
chr1	Cufflinks	exon	974316	975428	1000	+	.	transcript_id "43.T40";
chr1	Cufflinks	exon	974316	975464	1000	+	.	transcript_id "23.T32";
chr1	Cufflinks	exon	974316	975696	420	+	.	transcript_id "5.T45";
chr1	Cufflinks	exon	974316	975696	445	+	.	transcript_id "5.T47";
chr1	Cufflinks	exon	974316	975763	1000	+	.	transcript_id "47.T111";
chr1	Cufflinks	exon	974316	975763	381	+	.	transcript_id "47.T110";
chr1	Cufflinks	exon	974316	975774	653	+	.	transcript_id "15.T17";
chr1	Cufflinks	exon	974316	975774	805	+	.	transcript_id "15.T18";
chr1	Cufflinks	exon	974316	975828	1000	+	.	transcript_id "51.T70";
chr1	Cufflinks	exon	974316	975855	1000	+	.	transcript_id "40.T36";
chr1	Cufflinks	exon	974316	975856	1000	+	.	transcript_id "50.T50";
chr1	Cufflinks	exon	974316	975883	378	+	.	transcript_id "52.T57";
chr1	Cufflinks	exon	974316	975974	1000	+	.	transcript_id "34.T35";
chr1	Cufflinks	exon	974316	976233	1000	+	.	transcript_id "55.T46";
chr1	Cufflinks	exon	974316	976233	572	+	.	transcript_id "55.T47";
chr1	Cufflinks	exon	974316	976233	731	+	.	transcript_id "55.T45";
chr1	Cufflinks	exon	974316	976269	1000	-	.	transcript_id "16.T125";
chr1	Cufflinks	exon	974316	976706	384	+	.	transcript_id "33.T25";
chr1	HAVANA	exon	974316	974364	.	+	.	transcript_id "R.T179";
chr1	HAVANA	exon	974316	974364	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	974316	974364	.	+	.	transcript_id "R.T181";
chr1	HAVANA	exon	974316	974364	.	+	.	transcript_id "R.T183";
chr1	Cufflinks	transcript	974414	976672	1000	-	.	expr "1.4415899327"; transcript_id "53.T51"; ref "0"; sample_id "53";
chr1	Cufflinks	exon	974414	976269	1000	-	.	transcript_id "53.T51";
chr1	Cufflinks	exon	974442	974461	1000	+	.	transcript_id "37.T19";
chr1	Cufflinks	exon	974442	974461	535	+	.	transcript_id "37.T21";
chr1	Cufflinks	exon	974442	974461	808	+	.	transcript_id "37.T20";
chr1	Cufflinks	exon	974442	974510	1000	+	.	transcript_id "32.T58";
chr1	Cufflinks	exon	974442	974588	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	974442	974588	470	+	.	transcript_id "14.T48";
chr1	Cufflinks	exon	974442	974588	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	974442	974591	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	974442	975291	447	+	.	transcript_id "16.T123";
chr1	Cufflinks	exon	974442	975291	480	+	.	transcript_id "16.T124";
chr1	Cufflinks	exon	974442	975335	701	+	.	transcript_id "19.T32";
chr1	Cufflinks	exon	974442	975335	850	+	.	transcript_id "19.T34";
chr1	Cufflinks	exon	974442	975335	955	+	.	transcript_id "19.T35";
chr1	Cufflinks	exon	974442	975366	756	+	.	transcript_id "1.T48";
chr1	Cufflinks	exon	974442	975424	595	+	.	transcript_id "53.T49";
chr1	Cufflinks	exon	974442	975452	1000	+	.	transcript_id "35.T33";
chr1	Cufflinks	exon	974442	975452	439	+	.	transcript_id "35.T31";
chr1	Cufflinks	exon	974442	975464	711	+	.	transcript_id "23.T33";
chr1	Cufflinks	exon	974442	975525	1000	+	.	transcript_id "17.T42";
chr1	Cufflinks	exon	974442	975678	1000	+	.	transcript_id "14.T47";
chr1	Cufflinks	exon	974442	975696	1000	+	.	transcript_id "5.T46";
chr1	Cufflinks	exon	974442	975861	1000	+	.	transcript_id "11.T24";
chr1	Cufflinks	exon	974442	975862	1000	+	.	transcript_id "3.T43";
chr1	Cufflinks	exon	974442	975876	1000	+	.	transcript_id "39.T33";
chr1	Cufflinks	exon	974442	975876	530	+	.	transcript_id "39.T34";
chr1	Cufflinks	exon	974442	975876	637	+	.	transcript_id "39.T36";
chr1	Cufflinks	exon	974442	975883	1000	+	.	transcript_id "52.T55";
chr1	Cufflinks	exon	974442	975883	494	+	.	transcript_id "52.T54";
chr1	Cufflinks	exon	974442	975946	1000	+	.	transcript_id "10.T37";
chr1	Cufflinks	exon	974442	976018	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	974442	976093	1000	+	.	transcript_id "18.T42";
chr1	Cufflinks	exon	974442	976093	216	+	.	transcript_id "18.T43";
chr1	Cufflinks	exon	974442	976166	1000	+	.	transcript_id "26.T47";
chr1	Cufflinks	exon	974442	976189	1000	+	.	transcript_id "27.T46";
chr1	Cufflinks	exon	974442	976189	248	+	.	transcript_id "27.T47";
chr1	Cufflinks	exon	974442	976189	957	+	.	transcript_id "38.T41";
chr1	Cufflinks	exon	974442	976262	266	+	.	transcript_id "4.T61";
chr1	Cufflinks	exon	974442	976278	1000	+	.	transcript_id "21.T42";
chr1	Cufflinks	exon	974442	976670	447	+	.	transcript_id "7.T38";
chr1	Cufflinks	exon	974442	976670	576	+	.	transcript_id "7.T39";
chr1	Cufflinks	exon	974442	976706	1000	+	.	transcript_id "33.T26";
chr1	Cufflinks	exon	974442	976712	1000	+	.	transcript_id "44.T44";
chr1	HAVANA	exon	974442	974588	.	+	.	transcript_id "R.T183";
chr1	HAVANA	exon	974442	975008	.	+	.	transcript_id "R.T180";
chr1	HAVANA	exon	974442	975008	.	+	.	transcript_id "R.T181";
chr1	HAVANA	exon	974442	975108	.	+	.	transcript_id "R.T179";
chr1	Cufflinks	exon	974443	974493	1000	+	.	transcript_id "8.T55";
chr1	Cufflinks	transcript	974472	976644	1000	-	.	expr "1.4869480425"; transcript_id "23.T34"; ref "0"; sample_id "23";
chr1	Cufflinks	exon	974472	976272	1000	-	.	transcript_id "23.T34";
chr1	Cufflinks	transcript	974526	975835	1000	.	.	expr "0.2199926862"; transcript_id "22.T41"; ref "0"; sample_id "22";
chr1	Cufflinks	exon	974526	975835	1000	.	.	transcript_id "22.T41";
chr1	Cufflinks	transcript	974783	975909	1000	.	.	expr "0.7300847114"; transcript_id "8.T49"; ref "0"; sample_id "8";
chr1	Cufflinks	exon	974783	975909	1000	.	.	transcript_id "8.T49";
chr1	HAVANA	transcript	975204	982093	.	-	.	expr "0.0"; transcript_id "R.T184"; ref "1"; sample_id "R";
chr1	HAVANA	exon	975204	976269	.	-	.	transcript_id "R.T184";
chr1	ENSEMBL	transcript	975205	981029	.	-	.	expr "0.0"; transcript_id "R.T186"; ref "1"; sample_id "R";
chr1	HAVANA	transcript	975205	976641	.	-	.	expr "0.0"; transcript_id "R.T185"; ref "1"; sample_id "R";
chr1	ENSEMBL	exon	975205	976269	.	-	.	transcript_id "R.T186";
chr1	HAVANA	exon	975205	976269	.	-	.	transcript_id "R.T185";
chr1	Cufflinks	exon	975255	975291	472	+	.	transcript_id "16.T122";
chr1	Cufflinks	exon	975255	975862	790	+	.	transcript_id "3.T40";
chr1	Cufflinks	exon	975255	975974	436	+	.	transcript_id "34.T36";
chr1	Cufflinks	exon	975255	976093	203	+	.	transcript_id "18.T44";
chr1	Cufflinks	exon	975712	975805	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	exon	975712	975880	470	+	.	transcript_id "14.T48";
chr1	HAVANA	exon	975712	975865	.	+	.	transcript_id "R.T183";
chr1	Cufflinks	exon	975715	975880	389	+	.	transcript_id "14.T49";
chr1	Cufflinks	exon	975933	975959	957	+	.	transcript_id "51.T69";
chr1	Cufflinks	transcript	975978	976700	1000	.	.	expr "0.4992387951"; transcript_id "5.T49"; ref "0"; sample_id "5";
chr1	Cufflinks	exon	975978	976700	1000	.	.	transcript_id "5.T49";
chr1	Cufflinks	exon	976499	976558	1000	-	.	transcript_id "16.T125";
chr1	Cufflinks	exon	976499	976558	456	-	.	transcript_id "32.T60";
chr1	Cufflinks	exon	976499	976644	1000	-	.	transcript_id "23.T34";
chr1	Cufflinks	exon	976499	976665	1000	-	.	transcript_id "43.T41";
chr1	Cufflinks	exon	976499	976667	1000	-	.	transcript_id "46.T45";
chr1	Cufflinks	exon	976499	976672	1000	-	.	transcript_id "32.T59";
chr1	Cufflinks	exon	976499	976672	1000	-	.	transcript_id "53.T51";
chr1	Cufflinks	exon	976499	976702	1000	-	.	transcript_id "19.T36";
chr1	ENSEMBL	exon	976499	976624	.	-	.	transcript_id "R.T186";
chr1	HAVANA	exon	976499	976624	.	-	.	transcript_id "R.T184";
chr1	HAVANA	exon	976499	976641	.	-	.	transcript_id "R.T185";
chr1	Cufflinks	exon	976510	976548	374	+	.	transcript_id "4.T62";
chr1	Cufflinks	exon	976642	976665	1000	-	.	transcript_id "16.T125";
chr1	Cufflinks	exon	976642	976693	456	-	.	transcript_id "32.T60";
chr1	Cufflinks	transcript	977760	983537	1000	-	.	expr "0.2298810010"; transcript_id "12.T31"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	977760	977794	1000	-	.	transcript_id "12.T31";
chr1	Cufflinks	transcript	977822	982687	685	+	.	expr "0.2029114945"; transcript_id "31.T45"; ref "0"; sample_id "31";
chr1	Cufflinks	transcript	977822	984242	1000	+	.	expr "0.2960409350"; transcript_id "31.T46"; ref "0"; sample_id "31";
chr1	Cufflinks	exon	977822	982487	685	+	.	transcript_id "31.T45";
chr1	Cufflinks	exon	977822	982666	1000	+	.	transcript_id "31.T46";
chr1	Cufflinks	transcript	977867	982067	1000	-	.	expr "0.4619695454"; transcript_id "31.T47"; ref "0"; sample_id "31";
chr1	Cufflinks	exon	977867	977951	1000	-	.	transcript_id "31.T47";
chr1	Cufflinks	transcript	977911	980488	1000	-	.	expr "0.4153169006"; transcript_id "13.T48"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	977911	977951	1000	-	.	transcript_id "13.T48";
chr1	Cufflinks	exon	977982	980488	1000	-	.	transcript_id "13.T48";
chr1	Cufflinks	exon	977982	981173	1000	-	.	transcript_id "31.T47";
chr1	Cufflinks	transcript	978028	985651	1000	+	.	expr "0.3212379515"; transcript_id "2.T49"; ref "0"; sample_id "2";
chr1	Cufflinks	transcript	978028	985651	1000	.	.	expr "0.1722339291"; transcript_id "2.T48"; ref "0"; sample_id "2";
chr1	Cufflinks	transcript	978028	985651	264	+	.	expr "0.0850852120"; transcript_id "2.T50"; ref "0"; sample_id "2";
chr1	Cufflinks	transcript	978028	985651	307	+	.	expr "0.0989050511"; transcript_id "2.T51"; ref "0"; sample_id "2";
chr1	Cufflinks	exon	978028	982487	1000	+	.	transcript_id "2.T49";
chr1	Cufflinks	exon	978028	982487	264	+	.	transcript_id "2.T50";
chr1	Cufflinks	exon	978028	982487	307	+	.	transcript_id "2.T51";
chr1	Cufflinks	exon	978028	985651	1000	.	.	transcript_id "2.T48";
chr1	Cufflinks	transcript	978050	984234	1000	+	.	expr "0.2442527225"; transcript_id "28.T37"; ref "0"; sample_id "28";
chr1	Cufflinks	transcript	978050	984234	1000	.	.	expr "0.5171355731"; transcript_id "28.T36"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	978050	981379	1000	+	.	transcript_id "28.T37";
chr1	Cufflinks	exon	978050	984234	1000	.	.	transcript_id "28.T36";
chr1	Cufflinks	transcript	978062	981444	1000	.	.	expr "0.4094219865"; transcript_id "36.T45"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	978062	981444	1000	.	.	transcript_id "36.T45";
chr1	Cufflinks	transcript	978063	981552	1000	+	.	expr "0.4439151970"; transcript_id "13.T49"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	978063	980014	1000	+	.	transcript_id "13.T49";
chr1	Cufflinks	transcript	978074	980922	1000	.	.	expr "0.2535013051"; transcript_id "44.T42"; ref "0"; sample_id "44";
chr1	Cufflinks	exon	978074	980922	1000	.	.	transcript_id "44.T42";
chr1	Cufflinks	transcript	978076	981587	1000	.	.	expr "0.3693110405"; transcript_id "29.T29"; ref "0"; sample_id "29";
chr1	Cufflinks	transcript	978076	982783	1000	.	.	expr "0.2300588466"; transcript_id "12.T32"; ref "0"; sample_id "12";
chr1	Cufflinks	transcript	978076	983596	1000	+	.	expr "0.1849928799"; transcript_id "12.T33"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	978076	981587	1000	.	.	transcript_id "29.T29";
chr1	Cufflinks	exon	978076	982666	1000	+	.	transcript_id "12.T33";
chr1	Cufflinks	exon	978076	982783	1000	.	.	transcript_id "12.T32";
chr1	Cufflinks	transcript	978099	981848	1000	.	.	expr "0.9131187210"; transcript_id "35.T29"; ref "0"; sample_id "35";
chr1	Cufflinks	exon	978099	981848	1000	.	.	transcript_id "35.T29";
chr1	Cufflinks	transcript	978112	981317	1000	.	.	expr "0.4488155226"; transcript_id "25.T41"; ref "0"; sample_id "25";
chr1	Cufflinks	exon	978112	981317	1000	.	.	transcript_id "25.T41";
chr1	Cufflinks	transcript	978113	979451	1000	.	.	expr "0.1829346029"; transcript_id "43.T37"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	978113	979451	1000	.	.	transcript_id "43.T37";
chr1	Cufflinks	exon	978125	983537	1000	-	.	transcript_id "12.T31";
chr1	Cufflinks	transcript	978131	981584	1000	.	.	expr "0.2826891733"; transcript_id "48.T53"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	978131	981584	1000	.	.	transcript_id "48.T53";
chr1	Cufflinks	transcript	978229	979301	1000	.	.	expr "0.1971355721"; transcript_id "42.T32"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	978229	979301	1000	.	.	transcript_id "42.T32";
chr1	Cufflinks	transcript	978478	979556	1000	.	.	expr "0.1749830751"; transcript_id "15.T14"; ref "0"; sample_id "15";
chr1	Cufflinks	exon	978478	979556	1000	.	.	transcript_id "15.T14";
chr1	Cufflinks	transcript	978487	982868	1000	+	.	expr "0.2132296504"; transcript_id "49.T33"; ref "0"; sample_id "49";
chr1	Cufflinks	transcript	978487	984613	238	+	.	expr "0.0508757571"; transcript_id "49.T34"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	978487	982487	1000	+	.	transcript_id "49.T33";
chr1	Cufflinks	exon	978487	982487	238	+	.	transcript_id "49.T34";
chr1	Cufflinks	transcript	978771	981012	1000	.	.	expr "0.1540458012"; transcript_id "6.T44"; ref "0"; sample_id "6";
chr1	Cufflinks	exon	978771	981012	1000	.	.	transcript_id "6.T44";
chr1	ENSEMBL	exon	978881	981029	.	-	.	transcript_id "R.T186";
chr1	HAVANA	exon	978881	980657	.	-	.	transcript_id "R.T184";
chr1	Cufflinks	transcript	978943	980304	1000	.	.	expr "0.3019235319"; transcript_id "7.T31"; ref "0"; sample_id "7";
chr1	Cufflinks	exon	978943	980304	1000	.	.	transcript_id "7.T31";
chr1	Cufflinks	transcript	979101	980412	1000	.	.	expr "0.1440967723"; transcript_id "1.T42"; ref "0"; sample_id "1";
chr1	Cufflinks	transcript	979101	980468	1000	.	.	expr "0.2406341999"; transcript_id "17.T37"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	979101	980412	1000	.	.	transcript_id "1.T42";
chr1	Cufflinks	exon	979101	980468	1000	.	.	transcript_id "17.T37";
chr1	Cufflinks	transcript	979443	981379	1000	.	.	expr "0.2492209047"; transcript_id "42.T33"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	979443	981379	1000	.	.	transcript_id "42.T33";
chr1	Cufflinks	transcript	979621	980466	1000	.	.	expr "0.2418642709"; transcript_id "43.T38"; ref "0"; sample_id "43";
chr1	Cufflinks	exon	979621	980466	1000	.	.	transcript_id "43.T38";
chr1	Cufflinks	exon	980060	981552	1000	+	.	transcript_id "13.T49";
chr1	Cufflinks	transcript	980518	981571	1000	.	.	expr "0.1408575987"; transcript_id "1.T43"; ref "0"; sample_id "1";
chr1	Cufflinks	exon	980518	981571	1000	.	.	transcript_id "1.T43";
chr1	Cufflinks	transcript	980622	980882	1000	.	.	expr "5.8245570424"; transcript_id "16.T105"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	980622	980882	1000	.	.	transcript_id "16.T105";
chr1	HAVANA	exon	981137	981173	.	-	.	transcript_id "R.T184";
chr1	Cufflinks	transcript	981207	982681	1000	.	.	expr "0.1506533678"; transcript_id "6.T45"; ref "0"; sample_id "6";
chr1	Cufflinks	exon	981207	982681	1000	.	.	transcript_id "6.T45";
chr1	Cufflinks	transcript	981611	984245	1000	+	.	expr "0.1371178042"; transcript_id "13.T50"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	981611	982487	1000	+	.	transcript_id "13.T50";
chr1	Cufflinks	transcript	981692	982866	1000	.	.	expr "0.2207603016"; transcript_id "25.T40"; ref "0"; sample_id "25";
chr1	Cufflinks	exon	981692	982866	1000	.	.	transcript_id "25.T40";
chr1	Cufflinks	transcript	981713	983102	1000	.	.	expr "0.1523430935"; transcript_id "48.T54"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	981713	983102	1000	.	.	transcript_id "48.T54";
chr1	Cufflinks	transcript	981788	984022	1000	.	.	expr "0.3102913084"; transcript_id "29.T30"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	981788	984022	1000	.	.	transcript_id "29.T30";
chr1	Cufflinks	transcript	981794	984245	1000	.	.	expr "0.2255004165"; transcript_id "13.T51"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	981794	984245	1000	.	.	transcript_id "13.T51";
chr1	Cufflinks	transcript	981843	984209	1000	.	.	expr "0.0889223486"; transcript_id "17.T38"; ref "0"; sample_id "17";
chr1	Cufflinks	exon	981843	984209	1000	.	.	transcript_id "17.T38";
chr1	Cufflinks	transcript	981920	982725	1000	.	.	expr "0.3742601415"; transcript_id "36.T46"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	981920	982725	1000	.	.	transcript_id "36.T46";
chr1	Cufflinks	exon	982065	982067	1000	-	.	transcript_id "31.T47";
chr1	HAVANA	exon	982065	982093	.	-	.	transcript_id "R.T184";
chr1	Cufflinks	transcript	982073	984087	1000	.	.	expr "0.1690724825"; transcript_id "42.T34"; ref "0"; sample_id "42";
chr1	Cufflinks	exon	982073	984087	1000	.	.	transcript_id "42.T34";
chr1	Cufflinks	transcript	982496	986080	1000	.	.	expr "0.2110333073"; transcript_id "49.T35"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	982496	986080	1000	.	.	transcript_id "49.T35";
chr1	Cufflinks	transcript	982503	983610	1000	.	.	expr "0.1802090842"; transcript_id "44.T41"; ref "0"; sample_id "44";
chr1	Cufflinks	exon	982503	983610	1000	.	.	transcript_id "44.T41";
chr1	Cufflinks	exon	982594	982666	1000	+	.	transcript_id "2.T49";
chr1	Cufflinks	exon	982594	982666	238	+	.	transcript_id "49.T34";
chr1	Cufflinks	exon	982594	982666	264	+	.	transcript_id "2.T50";
chr1	Cufflinks	exon	982594	982868	1000	+	.	transcript_id "49.T33";
chr1	Cufflinks	exon	982598	982666	1000	+	.	transcript_id "13.T50";
chr1	Cufflinks	exon	982598	982666	307	+	.	transcript_id "2.T51";
chr1	Cufflinks	exon	982598	982687	685	+	.	transcript_id "31.T45";
chr1	Cufflinks	exon	982598	984234	1000	+	.	transcript_id "28.T37";
chr1	Cufflinks	transcript	982808	983550	1000	.	.	expr "0.3067044096"; transcript_id "36.T47"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	982808	983550	1000	.	.	transcript_id "36.T47";
chr1	Cufflinks	exon	982883	983055	264	+	.	transcript_id "2.T50";
chr1	Cufflinks	exon	982883	983055	307	+	.	transcript_id "2.T51";
chr1	Cufflinks	exon	982883	983596	1000	+	.	transcript_id "12.T33";
chr1	Cufflinks	exon	982883	984242	1000	+	.	transcript_id "31.T46";
chr1	Cufflinks	exon	982883	984245	1000	+	.	transcript_id "13.T50";
chr1	Cufflinks	exon	982883	984613	238	+	.	transcript_id "49.T34";
chr1	Cufflinks	exon	982883	985651	1000	+	.	transcript_id "2.T49";
chr1	Cufflinks	transcript	983034	984222	1000	+	.	expr "0.1612403642"; transcript_id "48.T55"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	983034	983055	1000	+	.	transcript_id "48.T55";
chr1	Cufflinks	exon	983203	984222	1000	+	.	transcript_id "48.T55";
chr1	Cufflinks	exon	983203	985651	264	+	.	transcript_id "2.T50";
chr1	Cufflinks	exon	983203	985651	307	+	.	transcript_id "2.T51";
chr1	Cufflinks	transcript	983711	984566	1000	.	.	expr "0.2469781624"; transcript_id "12.T27"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	983711	984566	1000	.	.	transcript_id "12.T27";
chr1	Cufflinks	transcript	984476	987026	1000	.	.	expr "0.2857755148"; transcript_id "29.T31"; ref "0"; sample_id "29";
chr1	Cufflinks	exon	984476	987026	1000	.	.	transcript_id "29.T31";
chr1	Cufflinks	transcript	984485	987042	1000	.	.	expr "0.3712964583"; transcript_id "28.T35"; ref "0"; sample_id "28";
chr1	Cufflinks	exon	984485	987042	1000	.	.	transcript_id "28.T35";
chr1	Cufflinks	transcript	984667	985622	1000	.	.	expr "0.2953957301"; transcript_id "13.T47"; ref "0"; sample_id "13";
chr1	Cufflinks	exon	984667	985622	1000	.	.	transcript_id "13.T47";
chr1	Cufflinks	transcript	984686	986735	1000	.	.	expr "0.1884126033"; transcript_id "12.T28"; ref "0"; sample_id "12";
chr1	Cufflinks	exon	984686	986735	1000	.	.	transcript_id "12.T28";
chr1	Cufflinks	transcript	984736	985441	1000	.	.	expr "0.2228356588"; transcript_id "48.T56"; ref "0"; sample_id "48";
chr1	Cufflinks	exon	984736	985441	1000	.	.	transcript_id "48.T56";
chr1	Cufflinks	transcript	984965	986055	1000	.	.	expr "0.2536047463"; transcript_id "36.T48"; ref "0"; sample_id "36";
chr1	Cufflinks	exon	984965	986055	1000	.	.	transcript_id "36.T48";
chr1	Cufflinks	transcript	985669	985864	1000	.	.	expr "6.0646621301"; transcript_id "16.T106"; ref "0"; sample_id "16";
chr1	Cufflinks	exon	985669	985864	1000	.	.	transcript_id "16.T106";
chr1	Cufflinks	transcript	985739	986217	1000	.	.	expr "0.4790172649"; transcript_id "2.T41"; ref "0"; sample_id "2";
chr1	Cufflinks	exon	985739	986217	1000	.	.	transcript_id "2.T41";
chr1	Cufflinks	transcript	986148	986942	1000	.	.	expr "0.2024578077"; transcript_id "49.T36"; ref "0"; sample_id "49";
chr1	Cufflinks	exon	986148	986942	1000	.	.	transcript_id "49.T36";