#mpa_v31_CHOCOPhlAn_201901
#/usr/local/bin/metaphlan --nproc 12 --input_type fastq MOCK_002_Illumina_Hiseq_3000_1.unmapped.fastq.gz --bowtie2out MOCK_002_Illumina_Hiseq_3000_se_metaphlan3-db.metaphlan3.bowtie2out.txt --bowtie2db metaphlan3 --biom MOCK_002_Illumina_Hiseq_3000_se_metaphlan3-db.metaphlan3.biom --output_file MOCK_002_Illumina_Hiseq_3000_se_metaphlan3-db.metaphlan3_profile.txt
#SampleID	Metaphlan_Analysis
#clade_name	NCBI_tax_id	relative_abundance	additional_species
k__Bacteria	2	65.2562	
k__Archaea	2157	34.7438	
k__Archaea|p__Euryarchaeota	2157|28890	29.48049	
k__Bacteria|p__Thermotogae	2|200918	22.68585	
k__Bacteria|p__Firmicutes	2|1239	11.31211	
k__Bacteria|p__Proteobacteria	2|1224	9.51154	
k__Bacteria|p__Chlorobi	2|1090	4.82803	
k__Bacteria|p__Aquificae	2|200783	4.05949	
k__Bacteria|p__Chloroflexi	2|200795	4.05202	
k__Bacteria|p__Gemmatimonadetes	2|142182	3.24592	
k__Archaea|p__Nanoarchaeota	2157|192989	3.15398	
k__Bacteria|p__Bacteroidetes	2|976	2.51048	
k__Archaea|p__Crenarchaeota	2157|28889	2.10933	
k__Bacteria|p__Planctomycetes	2|203682	1.33708	
k__Bacteria|p__Fusobacteria	2|32066	0.5044	
k__Bacteria|p__Cyanobacteria	2|1117	0.40888	
k__Bacteria|p__Spirochaetes	2|203691	0.33165	
k__Bacteria|p__Verrucomicrobia	2|74201	0.24349	
k__Bacteria|p__Acidobacteria	2|57723	0.10505	
k__Bacteria|p__Deinococcus_Thermus	2|1297	0.08252	
k__Bacteria|p__Actinobacteria	2|201174	0.0377	
k__Bacteria|p__Thermotogae|c__Thermotogae	2|200918|188708	22.68585	
k__Archaea|p__Euryarchaeota|c__Methanobacteria	2157|28890|183925	13.43029	
k__Bacteria|p__Firmicutes|c__Clostridia	2|1239|186801	11.31211	
k__Archaea|p__Euryarchaeota|c__Methanococci	2157|28890|183939	10.08795	
k__Bacteria|p__Chlorobi|c__Chlorobia	2|1090|191410	4.82803	
k__Bacteria|p__Aquificae|c__Aquificae	2|200783|187857	4.05949	
k__Bacteria|p__Chloroflexi|c__Chloroflexia	2|200795|32061	4.05202	
k__Archaea|p__Euryarchaeota|c__Thermococci	2157|28890|183968	3.83372	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria	2|1224|28221	3.5209	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria	2|1224|28216	3.50159	
k__Bacteria|p__Gemmatimonadetes|c__Gemmatimonadetes	2|142182|219685	3.24592	
k__Archaea|p__Nanoarchaeota|c__Nanoarchaeota_unclassified	2157|192989|	3.15398	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia	2|976|200643	2.51048	
k__Archaea|p__Crenarchaeota|c__Thermoprotei	2157|28889|183924	2.10933	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria	2|1224|1236	1.87701	
k__Archaea|p__Euryarchaeota|c__Halobacteria	2157|28890|183963	1.51534	
k__Bacteria|p__Planctomycetes|c__Planctomycetia	2|203682|203683	1.33708	
k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria	2|1224|29547	0.61204	
k__Bacteria|p__Fusobacteria|c__Fusobacteriia	2|32066|203490	0.5044	
k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_unclassified	2|1117|	0.40888	
k__Archaea|p__Euryarchaeota|c__Methanopyri	2157|28890|183988	0.38739	
k__Bacteria|p__Spirochaetes|c__Spirochaetia	2|203691|203692	0.33165	
k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae	2|74201|203494	0.24349	
k__Archaea|p__Euryarchaeota|c__Archaeoglobi	2157|28890|183980	0.2258	
k__Bacteria|p__Acidobacteria|c__Acidobacteriia	2|57723|204432	0.10505	
k__Bacteria|p__Deinococcus_Thermus|c__Deinococci	2|1297|188787	0.08252	
k__Bacteria|p__Actinobacteria|c__Actinobacteria	2|201174|1760	0.0377	
k__Bacteria|p__Thermotogae|c__Thermotogae|o__Thermotogales	2|200918|188708|2419	22.68585	
k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales	2157|28890|183925|2158	13.43029	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales	2|1239|186801|68295	10.99261	
k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales	2157|28890|183939|2182	10.08795	
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales	2|1090|191410|191411	4.82803	
k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales	2|200783|187857|32069	4.05949	
k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales	2157|28890|183968|2258	3.83372	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Herpetosiphonales	2|200795|32061|189772	3.53933	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales	2|1224|28216|32003	3.37748	
k__Bacteria|p__Gemmatimonadetes|c__Gemmatimonadetes|o__Gemmatimonadales	2|142182|219685|219686	3.24592	
k__Archaea|p__Nanoarchaeota|c__Nanoarchaeota_unclassified|o__Nanoarchaeales	2157|192989||1890940	3.15398	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfobacterales	2|1224|28221|213118	2.64968	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales	2|976|200643|171549	2.51048	
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Desulfurococcales	2157|28889|183924|114380	1.66514	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales	2|1224|1236|135622	1.63833	
k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales	2157|28890|183963|2235	1.51534	
k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales	2|203682|203683|112	1.33708	
k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales	2|1224|29547|213849	0.61204	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfuromonadales	2|1224|28221|69541	0.56845	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales	2|200795|32061|32064	0.51269	
k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales	2|32066|203490|203491	0.5044	
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Thermoproteales	2157|28889|183924|2266	0.44419	
k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_unclassified|o__Nostocales	2|1117||1161	0.40888	
k__Archaea|p__Euryarchaeota|c__Methanopyri|o__Methanopyrales	2157|28890|183988|68985	0.38739	
k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales	2|203691|203692|136	0.33165	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales	2|1239|186801|186802	0.3195	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales	2|1224|28221|213115	0.30277	
k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales	2|74201|203494|48461	0.24349	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales	2|1224|1236|72274	0.23868	
k__Archaea|p__Euryarchaeota|c__Archaeoglobi|o__Archaeoglobales	2157|28890|183980|2231	0.2258	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales	2|1224|28216|80840	0.12411	
k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales	2|57723|204432|204433	0.10505	
k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales	2|1297|188787|118964	0.08252	
k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Micromonosporales	2|201174|1760|85008	0.0377	
k__Bacteria|p__Thermotogae|c__Thermotogae|o__Thermotogales|f__Thermotogaceae	2|200918|188708|2419|188709	22.68585	
k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanocaldococcaceae	2157|28890|183939|2182|196117	9.68045	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales|f__Thermoanaerobacterales_Family_III_Incertae_Sedis	2|1239|186801|68295|543371	9.23402	
k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanothermaceae	2157|28890|183925|2158|2178	8.50678	
k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae	2157|28890|183925|2158|2159	4.92351	
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae	2|1090|191410|191411|191412	4.82803	
k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Hydrogenothermaceae	2|200783|187857|32069|224027	3.84836	
k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae	2157|28890|183968|2258|2259	3.83372	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Herpetosiphonales|f__Herpetosiphonaceae	2|200795|32061|189772|189773	3.53933	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae	2|1224|28216|32003|206379	3.37748	
k__Bacteria|p__Gemmatimonadetes|c__Gemmatimonadetes|o__Gemmatimonadales|f__Gemmatimonadaceae	2|142182|219685|219686|219687	3.24592	
k__Archaea|p__Nanoarchaeota|c__Nanoarchaeota_unclassified|o__Nanoarchaeales|f__Nanoarchaeaceae	2157|192989||1890940|1890941	3.15398	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfobacterales|f__Desulfobulbaceae	2|1224|28221|213118|213121	2.64968	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae	2|976|200643|171549|171551	2.10567	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales|f__Thermoanaerobacteraceae	2|1239|186801|68295|186814	1.75859	
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Desulfurococcales|f__Desulfurococcaceae	2157|28889|183924|114380|2272	1.66514	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae	2|1224|1236|135622|267890	1.63833	
k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales|f__Halobacteriaceae	2157|28890|183963|2235|2236	1.51534	
k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Planctomycetaceae	2|203682|203683|112|126	1.33708	
k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae	2|1224|29547|213849|72293	0.61204	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfuromonadales|f__Geobacteraceae	2|1224|28221|69541|213422	0.56845	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales|f__Chloroflexaceae	2|200795|32061|32064|1106	0.51269	
k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae	2|32066|203490|203491|203492	0.5044	
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Thermoproteales|f__Thermoproteaceae	2157|28889|183924|2266|2267	0.44419	
k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_unclassified|o__Nostocales|f__Nostocaceae	2|1117||1161|1162	0.40888	
k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanococcaceae	2157|28890|183939|2182|2183	0.4075	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae	2|976|200643|171549|815	0.40481	
k__Archaea|p__Euryarchaeota|c__Methanopyri|o__Methanopyrales|f__Methanopyraceae	2157|28890|183988|68985|183713	0.38739	
k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae	2|203691|203692|136|137	0.33165	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Hungateiclostridiaceae	2|1239|186801|186802|2304686	0.3195	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae	2|1224|28221|213115|194924	0.30277	
k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Akkermansiaceae	2|74201|203494|48461|1647988	0.24349	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae	2|1224|1236|72274|135621	0.23868	
k__Archaea|p__Euryarchaeota|c__Archaeoglobi|o__Archaeoglobales|f__Archaeoglobaceae	2157|28890|183980|2231|2232	0.2258	
k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Aquificaceae	2|200783|187857|32069|64898	0.21114	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae	2|1224|28216|80840|119060	0.12411	
k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae	2|57723|204432|204433|204434	0.10505	
k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae	2|1297|188787|118964|183710	0.08252	
k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Micromonosporales|f__Micromonosporaceae	2|201174|1760|85008|28056	0.0377	
k__Bacteria|p__Thermotogae|c__Thermotogae|o__Thermotogales|f__Thermotogaceae|g__Thermotoga	2|200918|188708|2419|188709|2335	22.68585	
k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanocaldococcaceae|g__Methanocaldococcus	2157|28890|183939|2182|196117|196118	9.68045	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales|f__Thermoanaerobacterales_Family_III_Incertae_Sedis|g__Caldicellulosiruptor	2|1239|186801|68295|543371|44000	9.23402	
k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanothermaceae|g__Methanothermus	2157|28890|183925|2158|2178|2179	8.50678	
k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter	2157|28890|183925|2158|2159|2172	4.92351	
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobium	2|1090|191410|191411|191412|1091	3.98278	
k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Hydrogenothermaceae|g__Persephonella	2|200783|187857|32069|224027|182899	3.84836	
k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae|g__Pyrococcus	2157|28890|183968|2258|2259|2260	3.83372	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Herpetosiphonales|f__Herpetosiphonaceae|g__Herpetosiphon	2|200795|32061|189772|189773|64	3.53933	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae|g__Nitrosomonas	2|1224|28216|32003|206379|914	3.37748	
k__Bacteria|p__Gemmatimonadetes|c__Gemmatimonadetes|o__Gemmatimonadales|f__Gemmatimonadaceae|g__Gemmatimonas	2|142182|219685|219686|219687|173479	3.24592	
k__Archaea|p__Nanoarchaeota|c__Nanoarchaeota_unclassified|o__Nanoarchaeales|f__Nanoarchaeaceae|g__Nanoarchaeum	2157|192989||1890940|1890941|193568	3.15398	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfobacterales|f__Desulfobulbaceae|g__Desulfobulbus	2|1224|28221|213118|213121|893	2.64968	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas	2|976|200643|171549|171551|836	2.10567	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales|f__Thermoanaerobacteraceae|g__Thermoanaerobacter	2|1239|186801|68295|186814|1754	1.75859	
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Desulfurococcales|f__Desulfurococcaceae|g__Ignicoccus	2157|28889|183924|114380|2272|54258	1.66514	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella	2|1224|1236|135622|267890|22	1.63833	
k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales|f__Halobacteriaceae|g__Halobacterium	2157|28890|183963|2235|2236|2239	1.51534	
k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Planctomycetaceae|g__Rhodopirellula	2|203682|203683|112|126|265488	1.33708	
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobaculum	2|1090|191410|191411|191412|256319	0.84525	
k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Wolinella	2|1224|29547|213849|72293|843	0.61204	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfuromonadales|f__Geobacteraceae|g__Geobacter	2|1224|28221|69541|213422|28231	0.56845	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales|f__Chloroflexaceae|g__Chloroflexus	2|200795|32061|32064|1106|1107	0.51269	
k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium	2|32066|203490|203491|203492|848	0.5044	
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Thermoproteales|f__Thermoproteaceae|g__Pyrobaculum	2157|28889|183924|2266|2267|2276	0.44419	
k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_unclassified|o__Nostocales|f__Nostocaceae|g__Trichormus	2|1117||1161|1162|264688	0.40888	
k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanococcaceae|g__Methanococcus	2157|28890|183939|2182|2183|2184	0.4075	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides	2|976|200643|171549|815|816	0.40481	
k__Archaea|p__Euryarchaeota|c__Methanopyri|o__Methanopyrales|f__Methanopyraceae|g__Methanopyrus	2157|28890|183988|68985|183713|2319	0.38739	
k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema	2|203691|203692|136|137|157	0.33165	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Hungateiclostridiaceae|g__Hungateiclostridium	2|1239|186801|186802|2304686|2304692	0.3195	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio	2|1224|28221|213115|194924|872	0.30277	
k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Akkermansiaceae|g__Akkermansia	2|74201|203494|48461|1647988|239934	0.24349	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas	2|1224|1236|72274|135621|286	0.23868	
k__Archaea|p__Euryarchaeota|c__Archaeoglobi|o__Archaeoglobales|f__Archaeoglobaceae|g__Archaeoglobus	2157|28890|183980|2231|2232|2233	0.2258	
k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Aquificaceae|g__Hydrogenobaculum	2|200783|187857|32069|64898|168657	0.21114	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Paraburkholderia	2|1224|28216|80840|119060|1822464	0.12411	
k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae|g__Acidobacterium	2|57723|204432|204433|204434|33973	0.10505	
k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus	2|1297|188787|118964|183710|1298	0.08252	
k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Micromonosporales|f__Micromonosporaceae|g__Salinispora	2|201174|1760|85008|28056|168694	0.0377	
k__Bacteria|p__Thermotogae|c__Thermotogae|o__Thermotogales|f__Thermotogaceae|g__Thermotoga|s__Thermotoga_neapolitana	2|200918|188708|2419|188709|2335|2337	12.05483	k__Bacteria|p__Thermotogae|c__Thermotogae|o__Thermotogales|f__Thermotogaceae|g__Thermotoga|s__Thermotoga_sp_RQ7
k__Bacteria|p__Thermotogae|c__Thermotogae|o__Thermotogales|f__Thermotogaceae|g__Thermotoga|s__Thermotoga_petrophila	2|200918|188708|2419|188709|2335|93929	9.82634	
k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanocaldococcaceae|g__Methanocaldococcus|s__Methanocaldococcus_jannaschii	2157|28890|183939|2182|196117|196118|2190	9.68045	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales|f__Thermoanaerobacterales_Family_III_Incertae_Sedis|g__Caldicellulosiruptor|s__Caldicellulosiruptor_saccharolyticus	2|1239|186801|68295|543371|44000|44001	8.69152	
k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanothermaceae|g__Methanothermus|s__Methanothermus_fervidus	2157|28890|183925|2158|2178|2179|2180	8.50678	
k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_oralis	2157|28890|183925|2158|2159|2172|66851	4.92351	
k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Hydrogenothermaceae|g__Persephonella|s__Persephonella_marina	2|200783|187857|32069|224027|182899|309805	3.84836	
k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae|g__Pyrococcus|s__Pyrococcus_horikoshii	2157|28890|183968|2258|2259|2260|53953	3.83372	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae|g__Nitrosomonas|s__Nitrosomonas_europaea	2|1224|28216|32003|206379|914|915	3.37748	
k__Bacteria|p__Gemmatimonadetes|c__Gemmatimonadetes|o__Gemmatimonadales|f__Gemmatimonadaceae|g__Gemmatimonas|s__Gemmatimonas_aurantiaca	2|142182|219685|219686|219687|173479|173480	3.24592	
k__Archaea|p__Nanoarchaeota|c__Nanoarchaeota_unclassified|o__Nanoarchaeales|f__Nanoarchaeaceae|g__Nanoarchaeum|s__Nanoarchaeum_equitans	2157|192989||1890940|1890941|193568|160232	3.15398	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfobacterales|f__Desulfobulbaceae|g__Desulfobulbus|s__Desulfobulbus_oralis	2|1224|28221|213118|213121|893|1986146	2.64968	
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobium|s__Chlorobium_phaeovibrioides	2|1090|191410|191411|191412|1091|1094	2.39333	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_gingivalis	2|976|200643|171549|171551|836|837	2.10567	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Herpetosiphonales|f__Herpetosiphonaceae|g__Herpetosiphon|s__Herpetosiphon_aurantiacus	2|200795|32061|189772|189773|64|65	1.79497	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales|f__Thermoanaerobacteraceae|g__Thermoanaerobacter|s__Thermoanaerobacter_ethanolicus	2|1239|186801|68295|186814|1754|1757	1.75859	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Herpetosiphonales|f__Herpetosiphonaceae|g__Herpetosiphon|s__Herpetosiphon_sp	2|200795|32061|189772|189773|64|71864	1.74436	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_baltica	2|1224|1236|135622|267890|22|62322	1.5534	k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_sp_SACH
k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales|f__Halobacteriaceae|g__Halobacterium|s__Halobacterium_salinarum	2157|28890|183963|2235|2236|2239|2242	1.51534	
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobium|s__Chlorobium_limicola	2|1090|191410|191411|191412|1091|1092	1.43827	
k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Planctomycetaceae|g__Rhodopirellula|s__Rhodopirellula_baltica	2|203682|203683|112|126|265488|265606	1.33708	k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Planctomycetaceae|g__Rhodopirellula|s__Rhodopirellula_sp_MGV
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Desulfurococcales|f__Desulfurococcaceae|g__Ignicoccus|s__Ignicoccus_hospitalis	2157|28889|183924|114380|2272|54258|160233	0.89567	
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobaculum|s__Chlorobaculum_tepidum	2|1090|191410|191411|191412|256319|1097	0.84525	
k__Bacteria|p__Thermotogae|c__Thermotogae|o__Thermotogales|f__Thermotogaceae|g__Thermotoga|s__Thermotoga_naphthophila	2|200918|188708|2419|188709|2335|93930	0.80468	
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Desulfurococcales|f__Desulfurococcaceae|g__Ignicoccus|s__Ignicoccus_islandicus	2157|28889|183924|114380|2272|54258|54259	0.76946	
k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Wolinella|s__Wolinella_succinogenes	2|1224|29547|213849|72293|843|844	0.61204	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfuromonadales|f__Geobacteraceae|g__Geobacter|s__Geobacter_sulfurreducens	2|1224|28221|69541|213422|28231|35554	0.56845	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Thermoanaerobacterales|f__Thermoanaerobacterales_Family_III_Incertae_Sedis|g__Caldicellulosiruptor|s__Caldicellulosiruptor_bescii	2|1239|186801|68295|543371|44000|31899	0.5425	
k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales|f__Chloroflexaceae|g__Chloroflexus|s__Chloroflexus_aurantiacus	2|200795|32061|32064|1106|1107|1108	0.51269	
k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_nucleatum	2|32066|203490|203491|203492|848|851	0.5044	k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_HMSC065F01,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CM1,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_HMSC064B12,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CM21,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CM22,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_oral_taxon_203,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_HMSC064B11,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_OBRC1,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CAG_649
k__Archaea|p__Crenarchaeota|c__Thermoprotei|o__Thermoproteales|f__Thermoproteaceae|g__Pyrobaculum|s__Pyrobaculum_calidifontis	2157|28889|183924|2266|2267|2276|181486	0.44419	
k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_unclassified|o__Nostocales|f__Nostocaceae|g__Trichormus|s__Trichormus_variabilis	2|1117||1161|1162|264688|264691	0.40888	k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_unclassified|o__Nostocales|f__Nostocaceae|g__Nostoc|s__Nostoc_sp_PCC_7120
k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanococcaceae|g__Methanococcus|s__Methanococcus_maripaludis	2157|28890|183939|2182|2183|2184|39152	0.4075	
k__Archaea|p__Euryarchaeota|c__Methanopyri|o__Methanopyrales|f__Methanopyraceae|g__Methanopyrus|s__Methanopyrus_kandleri	2157|28890|183988|68985|183713|2319|2320	0.38739	
k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_denticola	2|203691|203692|136|137|157|158	0.33165	
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Hungateiclostridiaceae|g__Hungateiclostridium|s__Hungateiclostridium_thermocellum	2|1239|186801|186802|2304686|2304692|1515	0.3195	
k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_piger	2|1224|28221|213115|194924|872|901	0.30277	
k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Akkermansiaceae|g__Akkermansia|s__Akkermansia_muciniphila	2|74201|203494|48461|1647988|239934|239935	0.24349	k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Akkermansiaceae|g__Akkermansia|s__Akkermansia_muciniphila_CAG_154,k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Akkermansiaceae|g__Akkermansia|s__Akkermansia_sp_CAG_344
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_putida_group	2|1224|1236|72274|135621|286|136845	0.23868	k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_monteilii,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_wadenswilerensis,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_oryzihabitans,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_mosselii,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_putida,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_reidholzensis,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_plecoglossicida,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fulva
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_vulgatus	2|976|200643|171549|815|816|821	0.2382	k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_33FAA,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_AF39_10AT,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_40A,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_AM23_18,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_AM18_9,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_4_3_47FAA,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_vulgatus_CAG_6
k__Archaea|p__Euryarchaeota|c__Archaeoglobi|o__Archaeoglobales|f__Archaeoglobaceae|g__Archaeoglobus|s__Archaeoglobus_fulgidus	2157|28890|183980|2231|2232|2233|2234	0.2258	
k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Aquificaceae|g__Hydrogenobaculum|s__Hydrogenobaculum_sp	2|200783|187857|32069|64898|168657|2053560	0.21114	
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_thetaiotaomicron	2|976|200643|171549|815|816|818	0.16661	k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_AM23_12,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_AR20,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_1_1_14,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_thetaiotaomicron_CAG_40
k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobium|s__Chlorobium_phaeobacteroides	2|1090|191410|191411|191412|1091|1096	0.15118	
k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Paraburkholderia|s__Paraburkholderia_xenovorans	2|1224|28216|80840|119060|1822464|36873	0.12411	
k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae|g__Acidobacterium|s__Acidobacterium_capsulatum	2|57723|204432|204433|204434|33973|33075	0.10505	
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_loihica	2|1224|1236|135622|267890|22|359303	0.08493	
k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_radiodurans	2|1297|188787|118964|183710|1298|1299	0.08252	
k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Micromonosporales|f__Micromonosporaceae|g__Salinispora|s__Salinispora_arenicola	2|201174|1760|85008|28056|168694|168697	0.0377