name: 'Create ROBOT diffs on Pull requests'

on:
  # Triggers the workflow on pull request events for the master branch
  pull_request:
    branches: [ master ]

  # Allows you to run this workflow manually from the Actions tab
  workflow_dispatch:

# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
  edit_file:
    runs-on: ubuntu-latest
    container: obolibrary/odklite:v1.3.0
    steps:
      - uses: actions/checkout@v2
      # Checks-out main branch under "main" directory
      - uses: actions/checkout@v2
        with:
          ref: master
          path: master
      - name: Diff classification
        run: export ROBOT_JAVA_ARGS=-Xmx6G; robot diff --labels True --left master/src/ontology/aeon-edit.owl --left-catalog master/src/ontology/catalog-v001.xml --right src/ontology/aeon-edit.owl --right-catalog src/ontology/catalog-v001.xml -f markdown -o edit-diff.md
      - name: Upload diff
        uses: actions/upload-artifact@v2
        with:
          name: edit-diff.md
          path: edit-diff.md
  classify_branch:
    runs-on: ubuntu-latest
    container: obolibrary/odklite:v1.3.0
    steps:
      - uses: actions/checkout@v2
      - name: Classify ontology
        run: cd src/ontology; make IMP=FALSE PAT=FALSE MIR=FALSE aeon.owl
      - name: Upload PR aeon.owl
        uses: actions/upload-artifact@v2
        with:
          name: aeon-pr.owl
          path: src/ontology/aeon.owl
          retention-days: 1
  classify_main:
    runs-on: ubuntu-latest
    container: obolibrary/odklite:v1.3.0
    steps:
      - uses: actions/checkout@v2
        with:
          ref: master
      - name: Classify ontology
        run: cd src/ontology; make IMP=FALSE PAT=FALSE MIR=FALSE aeon.owl
      - name: Upload master aeon.owl
        uses: actions/upload-artifact@v2
        with:
          name: aeon-master.owl
          path: src/ontology/aeon.owl
          retention-days: 1
  diff_classification:
    needs:
      - classify_branch
      - classify_main
    runs-on: ubuntu-latest
    container: obolibrary/odklite:v1.3.0
    steps:
      - uses: actions/checkout@v2
      - name: Download master classification
        uses: actions/download-artifact@v2
        with:
          name: aeon-master.owl
          path: src/ontology/aeon-master.owl
      - name: Download PR classification
        uses: actions/download-artifact@v2
        with:
          name: aeon-pr.owl
          path: src/ontology/aeon-pr.owl
      - name: Diff classification
        run: export ROBOT_JAVA_ARGS=-Xmx6G; cd src/ontology; robot diff --labels True --left aeon-master.owl/aeon.owl --left-catalog catalog-v001.xml --right aeon-pr.owl/aeon.owl --right-catalog catalog-v001.xml -f markdown -o classification-diff.md
      - name: Upload diff
        uses: actions/upload-artifact@v2
        with:
          name: classification-diff.md
          path: src/ontology/classification-diff.md
  post_comment:
    needs: [diff_classification, edit_file]
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v2
      - name: Download reasoned diff
        uses: actions/download-artifact@v2
        with:
          name: classification-diff.md
          path: classification-diff.md
      - name: Prepare reasoned comment
        run: "echo \"<details>\n <summary> Here's a diff of how these changes impact the classified ontology: </summary> \n\" >comment.md; cat classification-diff.md/classification-diff.md >>comment.md"
      - name: Post reasoned comment
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
        uses: NejcZdovc/comment-pr@v1.1.1
        with:
          file: "../../comment.md"
          identifier: "REASONED"
      - uses: actions/checkout@v2
      - name: Download edit diff
        uses: actions/download-artifact@v2
        with:
          name: edit-diff.md
          path: edit-diff.md
      - name: Prepare edit file comment
        run: "echo \"<details>\n <summary> Here's a diff of your edit file (unreasoned) </summary> \n\" >edit-comment.md; cat edit-diff.md/edit-diff.md >>edit-comment.md"
      - name: Post comment
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
        uses: NejcZdovc/comment-pr@v1.1.1
        with:
          file: "../../edit-comment.md"
          identifier: "UNREASONED"