tool	group	n	pos	AUROC	AUPRC
SIFT	all	22203	4003	0.7783889349471413	0.4421438544842223
SIFT	oncogene	5337	1434	0.7640829694713254	0.5199893513025153
SIFT	TSG	10158	1236	0.8166938439507011	0.38339650145213555
SIFT4G	all	20519	3977	0.8082608781171217	0.540524687630165
SIFT4G	oncogene	5362	1426	0.7859545683246103	0.5715910282592398
SIFT4G	TSG	9765	1221	0.8474785434055098	0.4706199108767246
Polyphen2_HDIV	all	22281	3926	0.8135184445335965	0.4698929726174499
Polyphen2_HDIV	oncogene	5347	1343	0.8052620313417037	0.5411908587378504
Polyphen2_HDIV	TSG	10121	1248	0.8465252281481994	0.40930704437280485
Polyphen2_HVAR	all	22281	3926	0.8260854200974637	0.5501114457446966
Polyphen2_HVAR	oncogene	5347	1343	0.8200104995525697	0.6024320707462961
Polyphen2_HVAR	TSG	10121	1248	0.8521619263423755	0.4815117820408987
MutationTaster	all	21066	3653	0.846536633750874	0.6762030293336887
MutationTaster	oncogene	5278	1425	0.8681042341124026	0.7785208910707159
MutationTaster	TSG	9509	1179	0.8969553724797807	0.6161387669236007
MutationAssessor	all	22099	3890	0.7937255807708863	0.5542967724320108
MutationAssessor	oncogene	5429	1382	0.7686979009661085	0.6041014175632554
MutationAssessor	TSG	10047	1181	0.8239823599961262	0.5351708984826172
PROVEAN	all	22230	4021	0.8185524745702887	0.5876658555631475
PROVEAN	oncogene	5338	1435	0.8128212819407211	0.6457049369408885
PROVEAN	TSG	10182	1252	0.8589171100036134	0.5478132768916758
VEST4	all	22427	4027	0.8327820094794917	0.6479563246143231
VEST4	oncogene	5365	1430	0.839665099830284	0.7129254014371775
VEST4	TSG	10245	1251	0.8845263126834535	0.626329790455385
MetaSVM	all	23098	4125	0.7620637876152555	0.5069701247532967
MetaSVM	oncogene	5733	1490	0.7656660713975012	0.5627618425827581
MetaSVM	TSG	10321	1263	0.7940255522298718	0.4996560806989369
MetaLR	all	23098	4125	0.7477352984863659	0.5442937194474687
MetaLR	oncogene	5733	1490	0.7501042380106516	0.5426882927795919
MetaLR	TSG	10321	1263	0.7878182599791927	0.5219568613427403
MetaRNN	all	22922	4097	0.8526020367314405	0.7333156100520049
MetaRNN	oncogene	5751	1485	0.8870795784063482	0.7927172481253376
MetaRNN	TSG	10344	1261	0.8893939868843705	0.714934228837229
M-CAP	all	20708	3876	0.7577946737405188	0.48092474901926285
M-CAP	oncogene	5096	1453	0.7746635875418622	0.5441770148736746
M-CAP	TSG	9463	1223	0.8028293171335805	0.4783423690604408
REVEL	all	22298	4047	0.8161422000063172	0.6521567785065284
REVEL	oncogene	5393	1483	0.8426920271172177	0.7386205041710758
REVEL	TSG	10226	1252	0.8593672455250561	0.6179991989092155
MutPred2	all	22978	4096	0.8456199863378483	0.6641621179212789
MutPred2	oncogene	5530	1437	0.8759344543470096	0.7726822439393
MutPred2	TSG	10325	1260	0.8956129453068229	0.6609761942567666
MVP	all	21531	3828	0.8066745944092858	0.5702986433439902
MVP	oncogene	5180	1450	0.8154185079042249	0.6574538039818139
MVP	TSG	10000	1219	0.8029502695197579	0.5018908706365559
gMVP	all	22370	4034	0.8502867830032854	0.6754428158729421
gMVP	oncogene	5449	1434	0.8601853058005978	0.739268250013035
gMVP	TSG	10060	1209	0.9129092346698522	0.7311718625827013
MisFit_D	all	22831	4058	0.8386548446030402	0.657302059374361
MisFit_D	oncogene	5748	1482	0.8456157433505866	0.7228429339809482
MisFit_D	TSG	10129	1189	0.8828922561963412	0.6622022015914757
MisFit_S	all	22831	4058	0.728768137403169	0.5488806110745832
MisFit_S	oncogene	5748	1482	0.8029436532656609	0.6945944490167513
MisFit_S	TSG	10129	1189	0.8459311962941429	0.634572610013892
MPC	all	20062	3737	0.8225925587467898	0.6129276589432756
MPC	oncogene	4778	1347	0.8419588896123104	0.7164388726678919
MPC	TSG	9044	1123	0.8731222491740849	0.6255977843773552
PrimateAI	all	23027	4105	0.7968600116305401	0.5080723156946669
PrimateAI	oncogene	5709	1481	0.8167279070049707	0.617598395817322
PrimateAI	TSG	10259	1254	0.8715339785534707	0.504628016594528
DEOGEN2	all	22599	4008	0.8146056201297582	0.6529912040591326
DEOGEN2	oncogene	5400	1362	0.8577175969261182	0.7320030879023922
DEOGEN2	TSG	10224	1246	0.8412275038644491	0.5961924949293914
BayesDel_addAF	all	23222	4140	0.864093415551596	0.7119491027797276
BayesDel_addAF	oncogene	5745	1492	0.8777503058872179	0.7639734336826562
BayesDel_addAF	TSG	10352	1270	0.8915122410513484	0.684070582783628
BayesDel_noAF	all	23222	4140	0.824848321786422	0.6486577862427525
BayesDel_noAF	oncogene	5745	1492	0.8272694593754668	0.6879365414884534
BayesDel_noAF	TSG	10352	1270	0.8668235776572852	0.6296691540766449
ClinPred	all	23151	4137	0.8694856256317781	0.7410433121046296
ClinPred	oncogene	5745	1492	0.8880481937052478	0.7893833336686696
ClinPred	TSG	10350	1270	0.8983122029900448	0.7169656571837322
LIST-S2	all	22377	4148	0.7675663487868076	0.5211718736439552
LIST-S2	oncogene	5704	1488	0.7556515533502682	0.5622483370817621
LIST-S2	TSG	9633	1259	0.8324354592005628	0.5360137941107234
VARITY_R	all	21164	3955	0.8743660209549894	0.7449776457367305
VARITY_R	oncogene	5425	1391	0.8940679280037723	0.8044391758734507
VARITY_R	TSG	9051	1227	0.8942277163614183	0.6898944434862687
VARITY_ER	all	21164	3955	0.8673560985457365	0.717007464480502
VARITY_ER	oncogene	5425	1391	0.88590875830067	0.7795532970686465
VARITY_ER	TSG	9051	1227	0.8858758831205844	0.657946703361872
VARITY_R_LOO	all	21164	3955	0.8725674515855821	0.7392871030862354
VARITY_R_LOO	oncogene	5425	1391	0.8912921867932779	0.7984612499278266
VARITY_R_LOO	TSG	9051	1227	0.8927209530619014	0.6833106087688268
VARITY_ER_LOO	all	21164	3955	0.866364673058279	0.7138131047325103
VARITY_ER_LOO	oncogene	5425	1391	0.8840328986504716	0.7747239226079738
VARITY_ER_LOO	TSG	9051	1227	0.8855329160854195	0.6564703792222433
ESM1b	all	23322	4164	0.841866981526492	0.6406439413138619
ESM1b	oncogene	5765	1491	0.8413507091527483	0.7190904263343948
ESM1b	TSG	10381	1270	0.8580774559090552	0.5943824345298883
AlphaMissense	all	22791	4123	0.8679010779054052	0.7500001035220522
AlphaMissense	oncogene	5761	1490	0.884840558849365	0.8044227911560782
AlphaMissense	TSG	9881	1231	0.8997205148312148	0.7494612410218056
PHACTboost	all	21505	4090	0.8325595996481688	0.6929943333540144
PHACTboost	oncogene	5719	1479	0.8502081021087681	0.7452352665450609
PHACTboost	TSG	9045	1228	0.8889987119861955	0.706923582927811
MutFormer	all	23188	4128	0.6926088603817403	0.44552743227542635
MutFormer	oncogene	5740	1491	0.7680322935494823	0.5817048463593634
MutFormer	TSG	10334	1261	0.6550444264177432	0.28620013611571454
MutScore	all	23197	4128	0.8760066144430202	0.753892191624398
MutScore	oncogene	5768	1491	0.877287338715482	0.8087676992660259
MutScore	TSG	10331	1263	0.8976676529684575	0.7204570590583838
popEVE	all	15355	3272	0.8597571589699364	0.7168078638020816
popEVE	oncogene	4895	1334	0.9003207957941839	0.8338873815884817
popEVE	TSG	6875	888	0.8419454614126403	0.6135357998799162
CADD_raw	all	23334	4168	0.8259580079527427	0.5959170138514386
CADD_raw	oncogene	5773	1492	0.8209680782909458	0.6423340222041513
CADD_raw	TSG	10381	1270	0.8936755950451863	0.6463232505448057
DANN	all	23234	4140	0.7622384918448216	0.3885769960135695
DANN	oncogene	5746	1492	0.7485341032127466	0.46753429341064845
DANN	TSG	10362	1270	0.8232404709860014	0.37753209565528345
fathmm-XF_coding	all	21608	4041	0.8129438313922586	0.5678748883418329
fathmm-XF_coding	oncogene	5617	1461	0.8099943246909213	0.6437656640975354
fathmm-XF_coding	TSG	9429	1228	0.8568864446895528	0.47619901018286553
Eigen-raw_coding	all	21619	4033	0.8142221433212391	0.5888586820426918
Eigen-raw_coding	oncogene	5623	1471	0.808526584617964	0.6330456968510026
Eigen-raw_coding	TSG	9499	1236	0.8740366753653261	0.6059938914751739
Eigen-PC-raw_coding	all	21619	4033	0.7994948222146253	0.557396689384153
Eigen-PC-raw_coding	oncogene	5623	1471	0.7950104558392244	0.6073177013089203
Eigen-PC-raw_coding	TSG	9499	1236	0.8651272076128348	0.57364521255889
GERPpp_RS	all	23223	4136	0.687297469927733	0.284989439672233
GERPpp_RS	oncogene	5740	1489	0.6580135452662425	0.34928039719465676
GERPpp_RS	TSG	10358	1270	0.7572010248003771	0.25294478519058894
GERP_92_mammals	all	17600	2591	0.6908502139164205	0.2599236866657227
GERP_92_mammals	oncogene	4198	901	0.6623825109902151	0.33281837857009766
GERP_92_mammals	TSG	7902	736	0.7415431339416811	0.198318541967072
phyloP100way_vertebrate	all	23334	4168	0.7638993735507716	0.4698223007096842
phyloP100way_vertebrate	oncogene	5773	1492	0.7656781821039784	0.566764449737914
phyloP100way_vertebrate	TSG	10381	1270	0.8176818365271019	0.4215203925739223
phyloP470way_mammalian	all	22163	3857	0.7294678847232798	0.34738185055014675
phyloP470way_mammalian	oncogene	5425	1408	0.7143206712381469	0.43734318617860685
phyloP470way_mammalian	TSG	10076	1178	0.7856152982242437	0.31020847827708287
phyloP17way_primate	all	23334	4168	0.5884074395577742	0.21126862193323534
phyloP17way_primate	oncogene	5773	1492	0.591961613538968	0.2942190446344985
phyloP17way_primate	TSG	10381	1270	0.610183891238159	0.15232158256855885
phastCons100way_vertebrate	all	23334	4168	0.6784616254531828	0.26781166317225436
phastCons100way_vertebrate	oncogene	5773	1492	0.6713305659460438	0.3571065116586228
phastCons100way_vertebrate	TSG	10381	1270	0.7201765279833929	0.2064406795637382
phastCons470way_mammalian	all	23294	4152	0.6475137505438011	0.24360168440304572
phastCons470way_mammalian	oncogene	5759	1488	0.6363829546856393	0.3298899851812772
phastCons470way_mammalian	TSG	10377	1270	0.69280072696524	0.18980019756989905
phastCons17way_primate	all	23334	4168	0.6301163133171486	0.26486153246725913
phastCons17way_primate	oncogene	5773	1492	0.6801456244406827	0.40483265016993203
phastCons17way_primate	TSG	10381	1270	0.6671367655434246	0.20379574984514928
bStatistic	all	23251	4146	0.4378469367181871	0.16037149318550525
bStatistic	oncogene	5767	1492	0.42543538246868295	0.24472174455718448
bStatistic	TSG	10364	1262	0.3835016842051746	0.09508701323181368