sbuild (Debian sbuild) 0.78.1 (09 February 2019) on 4be29f1fdf49 +==============================================================================+ | fastdnaml 1.2.2-14 (armhf) Sat, 18 May 2019 08:18:37 +0000 | +==============================================================================+ Package: fastdnaml Version: 1.2.2-14 Source Version: 1.2.2-14 Distribution: unstable-amd64-sbuild Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-981ad919-a20d-4997-89d9-6e0041d8bd01' with '<>' I: NOTICE: Log filtering will replace 'build/fastdnaml-M5hqDJ/resolver-Serr4z' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://cdn-fastly.deb.debian.org/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /home/build/sbuild-setup/repo/pool/main/f/fastdnaml/fastdnaml_1.2.2-14.dsc exists in /home/build/sbuild-setup/repo/pool/main/f/fastdnaml; copying to chroot I: NOTICE: Log filtering will replace 'build/fastdnaml-M5hqDJ/fastdnaml-1.2.2' with '<>' I: NOTICE: Log filtering will replace 'build/fastdnaml-M5hqDJ' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper (>= 11~), build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [396 B] Get:5 copy:/<>/apt_archive ./ Packages [484 B] Fetched 1837 B in 0s (107 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-base:armhf gcc-8-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-8-dev:armhf libgcc-8-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++-8-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-8-locales cpp-doc dh-make binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libmpx2-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf libstdc++-8-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-base:armhf gcc-8-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-8-dev:armhf libgcc-8-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++-8-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armhf sensible-utils ucf 0 upgraded, 83 newly installed, 0 to remove and 0 not upgraded. Need to get 1167 kB/60.4 MB of archives. After this operation, 232 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [904 B] Get:2 http://cdn-fastly.deb.debian.org/debian unstable/main armhf linux-libc-dev armhf 4.19.37-3 [1166 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1167 kB in 1s (1823 kB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12294 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... 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Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libc6-armhf-cross (2.28-10cross2) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up gcc-8-cross-base (8.3.0-7cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up linux-libc-dev:armhf (4.19.37-3) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4) ... Setting up libatomic1-armhf-cross (8.3.0-7cross1) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-2) ... Setting up libgcc1-armhf-cross (1:8.3.0-7cross1) ... Setting up gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-7cross1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:armhf (8.3.0-7) ... Setting up linux-libc-dev-armhf-cross (4.19.28-2cross2) ... Setting up autopoint (0.19.8.1-9) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-16) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up cpp-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Setting up libgomp1-armhf-cross (8.3.0-7cross1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libtool (2.4.6-10) ... Setting up libc6-dev-armhf-cross (2.28-10cross2) ... Setting up m4 (1.4.18-2) ... Setting up libstdc++6-armhf-cross (8.3.0-7cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libubsan1-armhf-cross (8.3.0-7cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up cpp-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armhf-cross (8.3.0-7cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libgcc-8-dev-armhf-cross (8.3.0-7cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-armhf-cross (8.3.0-7cross1) ... Setting up gcc-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Setting up gcc-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up po-debconf (1.0.21) ... Setting up g++-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-armhf (12.6) ... Setting up libc6:armhf (2.28-10) ... Setting up libc6-dev:armhf (2.28-10) ... Setting up libgcc1:armhf (1:8.3.0-7) ... Setting up libgomp1:armhf (8.3.0-7) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:armhf (8.3.0-7) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libstdc++6:armhf (8.3.0-7) ... Setting up debhelper (12.1.1) ... Setting up libasan5:armhf (8.3.0-7) ... Setting up libubsan1:armhf (8.3.0-7) ... Setting up libgcc-8-dev:armhf (8.3.0-7) ... Setting up libstdc++-8-dev:armhf (8.3.0-7) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for ccache (3.7.1-1) ... Updating symlinks in /usr/lib/ccache ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 3.16.0-4-amd64 #1 SMP Debian 3.16.51-3 (2017-12-13) amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-7 gcc-8_8.3.0-7 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-armhf-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-armhf-cross_8.3.0-7cross1 linux-libc-dev_4.19.37-3 Package versions: adduser_3.118 apt_1.8.1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16 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Format: 3.0 (quilt) Source: fastdnaml Binary: fastdnaml Architecture: any Version: 1.2.2-14 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Charles Plessy Homepage: ftp://ftp.bio.indiana.edu/molbio/evolve/fastdnaml/fastDNAml.html Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/fastdnaml Vcs-Git: https://salsa.debian.org/med-team/fastdnaml.git Testsuite: autopkgtest Build-Depends: debhelper (>= 11~) Package-List: fastdnaml deb science optional arch=any Checksums-Sha1: 78197cbd760163f65085ac80c36d4286a1f29e34 70005 fastdnaml_1.2.2.orig.tar.gz 08839bf7c6ca513be03c8af975437a1360059af9 7740 fastdnaml_1.2.2-14.debian.tar.xz Checksums-Sha256: 34690ec9a8e2fe1d86bea4a7cb10f7bc47e5e4c30719e1c9451210df4f160180 70005 fastdnaml_1.2.2.orig.tar.gz ce5c919b87893323e4e896b8bcb5d67ed65342e6a2baeb6c70051289d1d4c36f 7740 fastdnaml_1.2.2-14.debian.tar.xz Files: dd9c737e0f433879500391d0e229f763 70005 fastdnaml_1.2.2.orig.tar.gz eac50829890a84318bc8e4ce00793622 7740 fastdnaml_1.2.2-14.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlzWfq4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFTAA//ca/VPugFd0N1r8ie0Oga+TocrSyrC1g+ 5dHywdfLsr0gm/43OXLd6Enf2XINoSB7GoPndrA3xvcomV/RlNulQ/qkN7rxtKng 4Iq+B0GiFofW67Temfz4Z3Ta63BK61N4MjdLHtV7AUIOeOr2xm7SgLpvEO0ymYoI sLAjIBw1MuVhIYd1ig28JbufM+VjBRQLwfJ+PtrXf1KiCX3Q9ifjZqZQ3EsccLl8 82TivfNGTVQATPPivMPA+WpQDM29ZwXUEGFrDBQRYc0tP1dsV1bv+RvrlJqms2cp 0RJj8ENxgg2+7hmxzCgswFTs1bwacXTH3Vqm7cxRxKgls0MLdY6HKwN7S2/vf2/Z /519FrygGJ3S3mCDAqPcVUWllCRrCiy41mUwoMht+0XyWkShbxK65R56kqpetMuf UarfpdARnlaUTL58vRPlGuwfSxrp5lvNbsAY/oL2sTu9G92OYXLQue5dScW2nZSD C0jQY8bVlAY/faZMvH3RZYvNW+em5Ypcb/7xCKWWuCJih7Y9EuBcm+U2qS1JkHiB d3jmC1lJ0HL+z+7QKL0EvZd6MMZ+z0qnWTlEcX8IJlwFdlywNmTr9T6HoU/VXVBD d0x/ig33RUBYIk0BXlrEnrQrkpPhCHXetUKiKlZYLhGqydkDJPWFTyXjjX3bnK3y 6Q9Okp0QC3Q= =vG5f -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sat May 11 07:50:06 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fastdnaml_1.2.2-14.dsc dpkg-source: info: extracting fastdnaml in /<> dpkg-source: info: unpacking fastdnaml_1.2.2.orig.tar.gz dpkg-source: info: unpacking fastdnaml_1.2.2-14.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch dpkg-source: info: applying scripts.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CCACHE_COMPRESS=1 CCACHE_DIR=/var/cache/ccache-sbuild CCACHE_UMASK=002 CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=build PATH=/usr/lib/ccache:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=build SCHROOT_SESSION_ID=unstable-amd64-sbuild-981ad919-a20d-4997-89d9-6e0041d8bd01 SCHROOT_UID=1000 SCHROOT_USER=build SHELL=/bin/sh USER=build dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot -j16 dpkg-buildpackage: info: source package fastdnaml dpkg-buildpackage: info: source version 1.2.2-14 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean make -j16 clean make[1]: Entering directory '/<>' (cd source; rm -f *.o fastDNAml) rm -rf tests rm -f checkpoint.* make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -fr source/fastDNAml make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j16 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[1]: Entering directory '/<>' cd source && arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security fastDNAml.c -o fastDNAml -lm -Wl,-z,relro -Wl,-z,now In file included from fastDNAml.c:207: fastDNAml.h:222:10: warning: conflicting types for built-in function ‘malloc’ [-Wbuiltin-declaration-mismatch] char *malloc(); ^~~~~~ fastDNAml.c: In function ‘freeTopol’: fastDNAml.h:228:28: warning: implicit declaration of function ‘free’ [-Wimplicit-function-declaration] #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:342:5: note: in expansion of macro ‘Free’ Free(tpl->links); ^~~~ fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:342:5: note: in expansion of macro ‘Free’ Free(tpl->links); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:342:5: note: in expansion of macro ‘Free’ Free(tpl->links); ^~~~ fastDNAml.c: In function ‘freeTreeNode’: fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:1533:23: note: in expansion of macro ‘Free’ if (p->x->lv) Free(p->x->lv); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:1533:23: note: in expansion of macro ‘Free’ if (p->x->lv) Free(p->x->lv); ^~~~ fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:1534:9: note: in expansion of macro ‘Free’ Free(p->x); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:1534:9: note: in expansion of macro ‘Free’ Free(p->x); ^~~~ fastDNAml.c: In function ‘freeTree’: fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:1560:5: note: in expansion of macro ‘Free’ Free(tr->nodep[1]); /* Free the actual nodes */ ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:1560:5: note: in expansion of macro ‘Free’ Free(tr->nodep[1]); /* Free the actual nodes */ ^~~~ fastDNAml.c: In function ‘setupxarray’: fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:2028:9: note: in expansion of macro ‘Free’ Free(x); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:2028:9: note: in expansion of macro ‘Free’ Free(x); ^~~~ fastDNAml.c: In function ‘makenewz’: fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:2604:5: note: in expansion of macro ‘Free’ Free(abi); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:2604:5: note: in expansion of macro ‘Free’ Free(abi); ^~~~ fastDNAml.c: In function ‘readKeyValue’: fastDNAml.c:2886:15: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] string += strlen(key); ^~~~~~ fastDNAml.c:2886:15: warning: incompatible implicit declaration of built-in function ‘strlen’ fastDNAml.c:2886:15: note: include ‘’ or provide a declaration of ‘strlen’ fastDNAml.c:208:1: +#include fastDNAml.c:2886:15: string += strlen(key); ^~~~~~ fastDNAml.c: In function ‘fopen_pid’: fastDNAml.c:3231:47: warning: implicit declaration of function ‘getpid’; did you mean ‘getxtip’? [-Wimplicit-function-declaration] (void) sprintf(name_pid, "%s.%d", filenm, getpid()); ^~~~~~ getxtip In file included from fastDNAml.c:207: fastDNAml.c: In function ‘treeOut’: fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:3683:5: note: in expansion of macro ‘Free’ Free(treestr); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:3683:5: note: in expansion of macro ‘Free’ Free(treestr); ^~~~ fastDNAml.c: In function ‘cmpBestTrees’: fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:4535:5: note: in expansion of macro ‘Free’ Free(log_f0); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:4535:5: note: in expansion of macro ‘Free’ Free(log_f0); ^~~~ fastDNAml.c: In function ‘makeDenovoTree’: fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:4765:5: note: in expansion of macro ‘Free’ Free(enterorder); ^~~~ fastDNAml.h:228:28: note: include ‘’ or provide a declaration of ‘free’ #define Free(x) (void) free((char *) (x)) /* BSD */ ^~~~ fastDNAml.c:4765:5: note: in expansion of macro ‘Free’ Free(enterorder); ^~~~ fastDNAml.c: At top level: fastDNAml.c:4775:3: warning: return type defaults to ‘int’ [-Wimplicit-int] main () ^~~~ make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # do nothing make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install cp -a docs/fastDNAml_doc_1.2.txt `pwd`/debian/`dh_listpackages`/usr/share/`dh_listpackages`/fastdnaml_help # the scripts have to be executable thus mentioning these in debian/install is not enough cp -a scripts/* `pwd`/debian/`dh_listpackages`/usr/lib/`dh_listpackages`/bin chmod 755 `pwd`/debian/`dh_listpackages`/usr/lib/`dh_listpackages`/bin/* make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_installmenu -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'fastdnaml' in '../fastdnaml_1.2.2-14_armhf.deb'. dpkg-deb: building package 'fastdnaml-dbgsym' in '../fastdnaml-dbgsym_1.2.2-14_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../fastdnaml_1.2.2-14_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-05-18T08:19:00Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fastdnaml_1.2.2-14_armhf.changes: --------------------------------- Format: 1.8 Date: Sat, 11 May 2019 09:42:22 +0200 Source: fastdnaml Binary: fastdnaml fastdnaml-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1.2.2-14 Distribution: unstable-amd64-sbuild Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: fastdnaml - Tool for construction of phylogenetic trees of DNA sequences Closes: 928790 Changes: fastdnaml (1.2.2-14) unstable; urgency=medium . [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. . [ Andreas Tille ] * Do not hard code cc Closes: #928790 * Standards-Version: 4.3.0 Checksums-Sha1: afee5a8b761569f59740ba689f2f60cdeb3c88ca 64208 fastdnaml-dbgsym_1.2.2-14_armhf.deb 26fa9c91bf99364834c8f007bb9f06a4568ceff5 4498 fastdnaml_1.2.2-14_armhf.buildinfo bab7106305cfcb289df8f5b4d663fea33181c5e6 55000 fastdnaml_1.2.2-14_armhf.deb Checksums-Sha256: 4ee5401a240e483b0cad9d1c53017cdbce15263addae3af689a14af9e0fba5a5 64208 fastdnaml-dbgsym_1.2.2-14_armhf.deb 115f00e84a8125689c99c8b75856a70a1f5eb486df0ef47d7013017c0b01f37d 4498 fastdnaml_1.2.2-14_armhf.buildinfo 03a93bae8b676d3bb9fa84d873f0d4a4faacc937afd4759e0bcbd8ae5b24c027 55000 fastdnaml_1.2.2-14_armhf.deb Files: 3c368d8e37fc0c6a6ad93da6ad2e4d3f 64208 debug optional fastdnaml-dbgsym_1.2.2-14_armhf.deb 1adaedc2994ab4860fd7eaa3a626bba4 4498 science optional fastdnaml_1.2.2-14_armhf.buildinfo eafc759b4800789caba130699a081c61 55000 science optional fastdnaml_1.2.2-14_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: fastdnaml Binary: fastdnaml Architecture: armhf Version: 1.2.2-14 Checksums-Md5: 3c368d8e37fc0c6a6ad93da6ad2e4d3f 64208 fastdnaml-dbgsym_1.2.2-14_armhf.deb eafc759b4800789caba130699a081c61 55000 fastdnaml_1.2.2-14_armhf.deb Checksums-Sha1: afee5a8b761569f59740ba689f2f60cdeb3c88ca 64208 fastdnaml-dbgsym_1.2.2-14_armhf.deb bab7106305cfcb289df8f5b4d663fea33181c5e6 55000 fastdnaml_1.2.2-14_armhf.deb Checksums-Sha256: 4ee5401a240e483b0cad9d1c53017cdbce15263addae3af689a14af9e0fba5a5 64208 fastdnaml-dbgsym_1.2.2-14_armhf.deb 03a93bae8b676d3bb9fa84d873f0d4a4faacc937afd4759e0bcbd8ae5b24c027 55000 fastdnaml_1.2.2-14_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 18 May 2019 08:19:00 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.3), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-7), dash (= 0.5.10.2-5), debconf (= 1.5.72), debhelper (= 12.1.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.6), dpkg-dev (= 1.19.6), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-7), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-7), gcc-8-base (= 8.3.0-7), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-7), libatomic1 (= 8.3.0-7), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-3), libaudit1 (= 1:2.8.4-3), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-10), libc-dev-bin (= 2.28-10), libc6 (= 2.28-10), libc6-dev (= 2.28-10), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-7), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.249), libdpkg-perl (= 1.19.6), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-7), libgcc1 (= 1:8.3.0-7), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 8.3.0-7), libgpg-error0 (= 1.35-1), libicu63 (= 63.1-6), libisl19 (= 0.20-2), libitm1 (= 8.3.0-7), liblsan0 (= 8.3.0-7), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-7), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-6), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-7), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.3.0-7), libstdc++6 (= 8.3.0-7), libsystemd0 (= 241-4), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-7), libubsan1 (= 8.3.0-7), libuchardet0 (= 0.0.6-3), libudev1 (= 241-4), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 4.19.37-3), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), patch (= 2.7.6-3), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-6), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=16" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" MAKEFLAGS=" -j16" SOURCE_DATE_EPOCH="1557560542" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fastdnaml-dbgsym_1.2.2-14_armhf.deb ----------------------------------- new Debian package, version 2.0. size 64208 bytes: control archive=532 bytes. 379 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: fastdnaml-dbgsym Source: fastdnaml Version: 1.2.2-14 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 80 Depends: fastdnaml (= 1.2.2-14) Section: debug Priority: optional Description: debug symbols for fastdnaml Build-Ids: 4bae607573966ea0e82f0363cf7b14df2427c9de drwxr-xr-x root/root 0 2019-05-11 07:42 ./ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/lib/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/lib/debug/.build-id/4b/ -rw-r--r-- root/root 70720 2019-05-11 07:42 ./usr/lib/debug/.build-id/4b/ae607573966ea0e82f0363cf7b14df2427c9de.debug drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-05-11 07:42 ./usr/share/doc/fastdnaml-dbgsym -> fastdnaml fastdnaml_1.2.2-14_armhf.deb ---------------------------- new Debian package, version 2.0. size 55000 bytes: control archive=2892 bytes. 978 bytes, 22 lines control 5174 bytes, 72 lines md5sums 192 bytes, 7 lines * postinst #!/bin/sh 167 bytes, 5 lines * postrm #!/bin/sh Package: fastdnaml Version: 1.2.2-14 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 209 Depends: libc6 (>= 2.7) Suggests: phylip Section: science Priority: optional Homepage: ftp://ftp.bio.indiana.edu/molbio/evolve/fastdnaml/fastDNAml.html Description: Tool for construction of phylogenetic trees of DNA sequences fastDNAml is a program derived from Joseph Felsenstein's version 3.3 DNAML (part of his PHYLIP package). Users should consult the documentation for DNAML before using this program. . fastDNAml is an attempt to solve the same problem as DNAML, but to do so faster and using less memory, so that larger trees and/or more bootstrap replicates become tractable. Much of fastDNAml is merely a recoding of the PHYLIP 3.3 DNAML program from PASCAL to C. . Note that the homepage of this program is not available any more and so this program will probably not see any further updates. drwxr-xr-x root/root 0 2019-05-11 07:42 ./ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/bin/ -rwxr-xr-x root/root 38324 2019-05-11 07:42 ./usr/bin/fastDNAml -rwxr-xr-x root/root 420 2019-05-11 07:42 ./usr/bin/fastDNAml-util drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/lib/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/lib/fastdnaml/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/ -rwxr-xr-x root/root 857 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/ae2dnaml -rwxr-xr-x root/root 216 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/bootstrap -rwxr-xr-x root/root 163 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/categories -rwxr-xr-x root/root 140 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/categories_file -rwxr-xr-x root/root 179 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/checkpoint_summary -rwxr-xr-x root/root 145 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/clean_checkpoints -rwxr-xr-x root/root 3504 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/clean_jumbles -rwxr-xr-x root/root 183 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/dnaml_progress -rwxr-xr-x root/root 6087 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/fastDNAml_boot -rwxr-xr-x root/root 3779 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/fastDNAml_loop -rwxr-xr-x root/root 225 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/frequencies -rwxr-xr-x root/root 267 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/global -rwxr-xr-x root/root 1369 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/iterate_rates -rwxr-xr-x root/root 213 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/jumble -rwxr-xr-x root/root 172 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/min_info -rwxr-xr-x root/root 172 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/n_categories -rwxr-xr-x root/root 124 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/n_files -rwxr-xr-x root/root 759 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/out.PID -rwxr-xr-x root/root 162 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/outgroup -rwxr-xr-x root/root 134 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/printdata -rwxr-xr-x root/root 133 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/quickadd -rwxr-xr-x root/root 688 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/restart -rwxr-xr-x root/root 107 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/scores -rwxr-xr-x root/root 174 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/transition -rwxr-xr-x root/root 272 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/treefile -rwxr-xr-x root/root 75 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/treefile2prolog -rwxr-xr-x root/root 370 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/trees2NEXUS -rwxr-xr-x root/root 72 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/trees2prolog -rwxr-xr-x root/root 136 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/userlengths -rwxr-xr-x root/root 270 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/usertree -rwxr-xr-x root/root 270 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/usertrees -rwxr-xr-x root/root 161 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/weights -rwxr-xr-x root/root 187 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/weights_categories drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/doc-base/ -rw-r--r-- root/root 350 2019-05-11 07:42 ./usr/share/doc-base/fastdnaml -rw-r--r-- root/root 526 2019-05-11 07:42 ./usr/share/doc-base/fastdnaml-scripts drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/ -rw-r--r-- root/root 619 2019-05-11 07:42 ./usr/share/doc/fastdnaml/README.Debian -rw-r--r-- root/root 119 2019-05-11 07:42 ./usr/share/doc/fastdnaml/README.test -rw-r--r-- root/root 2468 2019-05-11 07:42 ./usr/share/doc/fastdnaml/changelog.Debian.gz -rw-r--r-- root/root 1273 2019-05-11 07:42 ./usr/share/doc/fastdnaml/copyright drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/ -rw-r--r-- root/root 2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5.out -rw-r--r-- root/root 708 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5.phy -rw-r--r-- root/root 2189 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5B.out -rw-r--r-- root/root 717 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5B.phy -rw-r--r-- root/root 2554 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5C.out -rw-r--r-- root/root 903 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5C.phy -rw-r--r-- root/root 2092 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5GRT.out -rw-r--r-- root/root 796 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5GRT.phy -rw-r--r-- root/root 2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I.out -rw-r--r-- root/root 710 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I.phy -rw-r--r-- root/root 2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I2.out -rw-r--r-- root/root 800 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I2.phy -rw-r--r-- root/root 2172 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5J.out -rw-r--r-- root/root 717 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5J.phy -rw-r--r-- root/root 2370 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5R.out -rw-r--r-- root/root 780 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5R.phy -rw-r--r-- root/root 2161 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5TF.out -rw-r--r-- root/root 743 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5TF.phy -rw-r--r-- root/root 1297 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5U.out.gz -rw-r--r-- root/root 941 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5U.phy -rw-r--r-- root/root 2157 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5W.out -rw-r--r-- root/root 851 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5W.phy -rw-r--r-- root/root 2503 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5WC.out -rw-r--r-- root/root 1045 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5WC.phy drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/ -rw-r--r-- root/root 715 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/Makefile -rw-r--r-- root/root 27 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/control -rw-r--r-- root/root 1246 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/fastdnaml.data lrwxrwxrwx root/root 0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/fastDNAml_doc_1.2.txt -> ../../fastdnaml/fastdnaml_help -rw-r--r-- root/root 6980 2000-01-03 15:58 ./usr/share/doc/fastdnaml/fastDNAml_scripts.txt.gz drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/fastdnaml/ -rw-r--r-- root/root 34150 2000-01-03 15:58 ./usr/share/fastdnaml/fastdnaml_help drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/man/ drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2019-05-11 07:42 ./usr/share/man/man1/fastDNAml-util.1.gz -> fastDNAml.1.gz -rw-r--r-- root/root 742 2019-05-11 07:42 ./usr/share/man/man1/fastDNAml.1.gz drwxr-xr-x root/root 0 2019-05-11 07:42 ./usr/share/menu/ -rw-r--r-- root/root 191 2019-05-11 07:42 ./usr/share/menu/fastdnaml lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [524 B] Get:5 copy:/<>/apt_archive ./ Packages [612 B] Fetched 2099 B in 0s (146 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat libapt-pkg-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl Recommended packages: libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat libapt-pkg-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 5472 kB of archives. After this operation, 16.5 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [844 B] Get:2 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:4 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:5 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:6 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:7 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:8 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:9 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:10 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:11 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:12 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:13 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:14 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:15 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-2 [1530 kB] Get:16 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:17 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:18 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:19 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:20 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:21 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:22 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:23 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:24 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:25 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:26 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:27 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:28 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:29 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:30 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:31 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:32 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:33 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:34 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:35 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:36 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:37 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:38 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:39 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:40 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:41 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:42 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 lintian all 2.13.0 [1175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5472 kB in 11s (497 kB/s) Selecting previously unselected package netbase. (Reading database ... 18051 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package diffstat. Preparing to unpack .../01-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../02-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../03-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../04-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../05-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... 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Unpacking libio-async-perl (0.72-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../29-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b5) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../30-libipc-run-perl_20180523.0-1_all.deb ... Unpacking libipc-run-perl (20180523.0-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../31-liblist-moreutils-perl_0.416-1+b4_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b4) ... Selecting previously unselected package libparse-debianchangelog-perl. Preparing to unpack .../32-libparse-debianchangelog-perl_1.2.0-13_all.deb ... Unpacking libparse-debianchangelog-perl (1.2.0-13) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../33-libpath-tiny-perl_0.108-1_all.deb ... Unpacking libpath-tiny-perl (0.108-1) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../34-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../35-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../36-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../37-libyaml-libyaml-perl_0.76+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.76+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../38-patchutils_0.3.4-2_amd64.deb ... Unpacking patchutils (0.3.4-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../39-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../40-lintian_2.13.0_all.deb ... Unpacking lintian (2.13.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armhf. Preparing to unpack .../41-sbuild-build-depends-lintian-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libssl1.1:amd64 (1.1.1b-2) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libfuture-perl (0.39-1) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libio-async-perl (0.72-1) ... Setting up patchutils (0.3.4-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up diffstat (1.62-1) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up netbase (5.6) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up liburi-perl (1.76-1) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.13.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-10) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: autoconf* automake* autopoint* autotools-dev* binutils-arm-linux-gnueabihf* bsdmainutils* cpp-8-arm-linux-gnueabihf* cpp-arm-linux-gnueabihf* cross-config* crossbuild-essential-armhf* debhelper* dh-autoreconf* dh-strip-nondeterminism* diffstat* dpkg-cross* dwz* file* g++-8-arm-linux-gnueabihf* g++-arm-linux-gnueabihf* gcc-8-arm-linux-gnueabihf* gcc-8-arm-linux-gnueabihf-base* gcc-8-base:armhf* gcc-8-cross-base* gcc-arm-linux-gnueabihf* gettext* gettext-base* groff-base* intltool-debian* libapt-pkg-perl* libarchive-zip-perl* libasan5:armhf* libasan5-armhf-cross* libatomic1:armhf* libatomic1-armhf-cross* libbsd0* libc6:armhf* libc6-armhf-cross* libc6-dev:armhf* libc6-dev-armhf-cross* libcapture-tiny-perl* libcgi-pm-perl* libclass-accessor-perl* libclone-perl* libconfig-auto-perl* libconfig-inifiles-perl* libcroco3* libdebian-dpkgcross-perl* libdigest-hmac-perl* libelf1* libemail-valid-perl* libexporter-tiny-perl* libfile-basedir-perl* libfile-homedir-perl* libfile-stripnondeterminism-perl* libfile-which-perl* libfuture-perl* libgcc-8-dev:armhf* libgcc-8-dev-armhf-cross* libgcc1:armhf* libgcc1-armhf-cross* libglib2.0-0* libgomp1:armhf* libgomp1-armhf-cross* libhtml-parser-perl* libhtml-tagset-perl* libicu63* libio-async-perl* libio-pty-perl* libio-socket-ssl-perl* libio-string-perl* libipc-run-perl* libipc-system-simple-perl* liblist-moreutils-perl* liblocale-gettext-perl* libmagic-mgc* libmagic1* libmailtools-perl* libncurses6* libnet-dns-perl* libnet-domain-tld-perl* libnet-ip-perl* libnet-smtp-ssl-perl* libnet-ssleay-perl* libparse-debianchangelog-perl* libpath-tiny-perl* libpipeline1* libsigsegv2* libssl1.1* libstdc++-8-dev:armhf* libstdc++-8-dev-armhf-cross* libstdc++6:armhf* libstdc++6-armhf-cross* libstruct-dumb-perl* libsub-name-perl* libtext-levenshtein-perl* libtimedate-perl* libtool* libtry-tiny-perl* libubsan1:armhf* libubsan1-armhf-cross* libuchardet0* liburi-perl* libxml-libxml-perl* libxml-namespacesupport-perl* libxml-sax-base-perl* libxml-sax-perl* libxml-simple-perl* libxml2* libyaml-0-2* libyaml-libyaml-perl* libyaml-perl* lintian* linux-libc-dev:armhf* linux-libc-dev-armhf-cross* m4* man-db* netbase* patchutils* perl-openssl-defaults* po-debconf* sbuild-build-depends-lintian-dummy:armhf* sbuild-build-depends-main-dummy:armhf* sensible-utils* t1utils* ucf* 0 upgraded, 0 newly installed, 125 to remove and 0 not upgraded. After this operation, 248 MB disk space will be freed. (Reading database ... 19760 files and directories currently installed.) Removing sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Removing crossbuild-essential-armhf (12.6) ... Removing g++-arm-linux-gnueabihf (4:8.3.0-1) ... Removing gcc-arm-linux-gnueabihf (4:8.3.0-1) ... Removing g++-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Removing gcc-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Removing binutils-arm-linux-gnueabihf (2.31.1-16) ... Removing sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Removing lintian (2.13.0) ... Removing cpp-arm-linux-gnueabihf (4:8.3.0-1) ... Removing cpp-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Removing dpkg-cross (2.6.15-2) ... Removing cross-config (2.6.15-2) ... Removing diffstat (1.62-1) ... Removing libdebian-dpkgcross-perl (2.6.15-2) ... Removing gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-7cross1) ... Removing libstdc++-8-dev:armhf (8.3.0-7) ... Removing libgcc-8-dev:armhf (8.3.0-7) ... Removing libubsan1:armhf (8.3.0-7) ... Removing libasan5:armhf (8.3.0-7) ... Removing libstdc++6:armhf (8.3.0-7) ... Removing libstdc++-8-dev-armhf-cross (8.3.0-7cross1) ... Removing libgcc-8-dev-armhf-cross (8.3.0-7cross1) ... Removing libubsan1-armhf-cross (8.3.0-7cross1) ... Removing libasan5-armhf-cross (8.3.0-7cross1) ... Removing libstdc++6-armhf-cross (8.3.0-7cross1) ... Removing libapt-pkg-perl (0.1.34+b1) ... Removing libatomic1:armhf (8.3.0-7) ... Removing libatomic1-armhf-cross (8.3.0-7cross1) ... Removing libc6-dev:armhf (2.28-10) ... Removing libgomp1:armhf (8.3.0-7) ... Removing libc6-dev-armhf-cross (2.28-10cross2) ... Removing libgomp1-armhf-cross (8.3.0-7cross1) ... Removing libcapture-tiny-perl (0.48-1) ... Removing libparse-debianchangelog-perl (1.2.0-13) ... Removing libcgi-pm-perl (4.40-1) ... Removing libclass-accessor-perl (0.51-1) ... Removing libclone-perl (0.41-1+b1) ... Removing libconfig-auto-perl (0.44-1) ... Removing libconfig-inifiles-perl (3.000001-1) ... Removing libemail-valid-perl (1.202-1) ... Removing libnet-dns-perl (1.19-1) ... Removing libdigest-hmac-perl (1.03+dfsg-2) ... Removing liblist-moreutils-perl (0.416-1+b4) ... Removing libexporter-tiny-perl (1.002001-1) ... Removing libfile-basedir-perl (0.08-1) ... Removing libfile-homedir-perl (1.004-1) ... Removing libfile-which-perl (1.23-1) ... Removing libio-async-perl (0.72-1) ... Removing libfuture-perl (0.39-1) ... Removing libgcc1-armhf-cross (1:8.3.0-7cross1) ... Removing libhtml-parser-perl (3.72-3+b3) ... Removing libhtml-tagset-perl (3.20-3) ... Removing libxml-simple-perl (2.25-1) ... Removing libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Removing libipc-run-perl (20180523.0-1) ... Removing libio-pty-perl (1:1.08-1.1+b5) ... Removing libmailtools-perl (2.18-1) ... Removing libnet-smtp-ssl-perl (1.04-1) ... Removing libio-socket-ssl-perl (2.060-3) ... Removing libio-string-perl (1.08-3) ... Removing libipc-system-simple-perl (1.25-4) ... Removing liblocale-gettext-perl (1.07-3+b4) ... Removing libnet-domain-tld-perl (1.75-1) ... Removing libnet-ip-perl (1.26-2) ... Removing libnet-ssleay-perl (1.85-2+b1) ... Removing libpath-tiny-perl (0.108-1) ... Removing perl-openssl-defaults:amd64 (3) ... Removing libssl1.1:amd64 (1.1.1b-2) ... Removing libstruct-dumb-perl (0.09-1) ... Removing libsub-name-perl (0.21-1+b3) ... Removing libtext-levenshtein-perl (0.13-1) ... Removing libtimedate-perl (2.3000-2) ... Removing libtry-tiny-perl (0.30-1) ... Removing liburi-perl (1.76-1) ... Removing libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::SAX::PurePerl with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Removing libxml-namespacesupport-perl (1.12-1) ... Removing libxml-sax-base-perl (1.09-1) ... Removing libyaml-libyaml-perl (0.76+repack-1) ... Removing libyaml-0-2:amd64 (0.2.1-1) ... Removing libyaml-perl (1.27-1) ... Removing linux-libc-dev:armhf (4.19.37-3) ... Removing linux-libc-dev-armhf-cross (4.19.28-2cross2) ... Removing netbase (5.6) ... Removing patchutils (0.3.4-2) ... Removing ucf (3.0038+nmu1) ... Removing t1utils (1.41-3) ... Removing gcc-8-cross-base (8.3.0-7cross1) ... Removing libc6-armhf-cross (2.28-10cross2) ... Removing dh-autoreconf (19) ... Removing debhelper (12.1.1) ... Removing dh-strip-nondeterminism (1.1.2-1) ... Removing automake (1:1.16.1-4) ... Removing autoconf (2.69-11) ... Removing autopoint (0.19.8.1-9) ... Removing libtool (2.4.6-10) ... Removing autotools-dev (20180224.1) ... Removing man-db (2.8.5-2) ... Removing bsdmainutils (11.1.2+b1) ... Removing dwz (0.12-3) ... Removing file (1:5.35-4) ... Removing po-debconf (1.0.21) ... Removing intltool-debian (0.35.0+20060710.5) ... Removing gettext (0.19.8.1-9) ... Removing gettext-base (0.19.8.1-9) ... Removing groff-base (1.22.4-3) ... Removing libfile-stripnondeterminism-perl (1.1.2-1) ... Removing libarchive-zip-perl (1.64-1) ... Removing libbsd0:amd64 (0.9.1-2) ... Removing libc6:armhf (2.28-10) ... Removing libcroco3:amd64 (0.6.12-3) ... Removing libelf1:amd64 (0.176-1) ... Removing libgcc1:armhf (1:8.3.0-7) ... Removing libglib2.0-0:amd64 (2.58.3-1) ... Removing libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Removing libicu63:amd64 (63.1-6) ... Removing libmagic1:amd64 (1:5.35-4) ... Removing libmagic-mgc (1:5.35-4) ... Removing libncurses6:amd64 (6.1+20181013-2) ... Removing libpipeline1:amd64 (1.5.1-2) ... Removing m4 (1.4.18-2) ... Removing libsigsegv2:amd64 (2.12-2) ... Removing libuchardet0:amd64 (0.0.6-3) ... Removing sensible-utils (0.0.12) ... Removing gcc-8-base:armhf (8.3.0-7) ... Processing triggers for ccache (3.7.1-1) ... Updating symlinks in /usr/lib/ccache ... Processing triggers for libc-bin (2.28-10) ... (Reading database ... 12351 files and directories currently installed.) Purging configuration files for libglib2.0-0:amd64 (2.58.3-1) ... Purging configuration files for libssl1.1:amd64 (1.1.1b-2) ... Purging configuration files for libmagic1:amd64 (1:5.35-4) ... Purging configuration files for lintian (2.13.0) ... Purging configuration files for man-db (2.8.5-2) ... Purging configuration files for libxml-sax-perl (1.00+dfsg-1) ... Purging configuration files for cross-config (2.6.15-2) ... Purging configuration files for bsdmainutils (11.1.2+b1) ... Purging configuration files for ucf (3.0038+nmu1) ... Purging configuration files for autoconf (2.69-11) ... Purging configuration files for libc6:armhf (2.28-10) ... Purging configuration files for groff-base (1.22.4-3) ... Purging configuration files for netbase (5.6) ... Purging configuration files for dpkg-cross (2.6.15-2) ... Purging configuration files for libdebian-dpkgcross-perl (2.6.15-2) ... Removing foreign architecture armhf +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 5 Distribution: unstable-amd64-sbuild Foreign Architectures: armhf Host Architecture: armhf Install-Time: 14 Job: /home/build/sbuild-setup/repo/pool/main/f/fastdnaml/fastdnaml_1.2.2-14.dsc Lintian: pass Machine Architecture: amd64 Package: fastdnaml Package-Time: 23 Source-Version: 1.2.2-14 Space: n/a Status: successful Version: 1.2.2-14 -------------------------------------------------------------------------------- Finished at 2019-05-18T08:19:00Z Build needed 00:00:23, no disk space