sbuild (Debian sbuild) 0.78.1 (09 February 2019) on 4be29f1fdf49

+==============================================================================+
| mafft 7.429-1 (armhf)                        Sat, 03 Aug 2019 12:08:48 +0000 |
+==============================================================================+

Package: mafft
Version: 7.429-1
Source Version: 7.429-1
Distribution: unstable-amd64-sbuild
Machine Architecture: amd64
Host Architecture: armhf
Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-48d7d77c-263b-447d-8666-2d3dbe0c4e96' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/mafft-J54E6p/resolver-WYhSQS' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Hit:1 http://cdn-fastly.deb.debian.org/debian unstable InRelease
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following package was automatically installed and is no longer required:
  sensible-utils
Use 'apt autoremove' to remove it.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

/home/build/sbuild-setup/repo/pool/main/m/mafft/mafft_7.429-1.dsc exists in /home/build/sbuild-setup/repo/pool/main/m/mafft; copying to chroot
I: NOTICE: Log filtering will replace 'build/mafft-J54E6p/mafft-7.429' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/mafft-J54E6p' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 12), build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf
Filtered Build-Depends: debhelper-compat (= 12), build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [398 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [486 B]
Fetched 1841 B in 0s (167 kB/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf
  bsdmainutils cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config
  crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism
  dpkg-cross dwz file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf
  gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-base:armhf
  gcc-8-cross-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf
  gettext gettext-base groff-base intltool-debian libarchive-zip-perl
  libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross
  libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross
  libconfig-auto-perl libconfig-inifiles-perl libcroco3
  libdebian-dpkgcross-perl libfile-homedir-perl
  libfile-stripnondeterminism-perl libfile-which-perl libgcc-8-dev:armhf
  libgcc-8-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0
  libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl
  liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1
  libsigsegv2 libstdc++-8-dev:armhf libstdc++-8-dev-armhf-cross
  libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool
  libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl
  libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl
  libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf
  linux-libc-dev-armhf-cross m4 man-db po-debconf ucf
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican
  | wordlist whois vacation gcc-8-locales cpp-doc dh-make binutils-multiarch
  gcc-8-doc libstdc++6-8-dbg-armhf-cross libgcc1-dbg-armhf-cross
  libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross
  libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross
  libubsan1-dbg-armhf-cross libmpx2-dbg-armhf-cross
  libquadmath0-dbg-armhf-cross manpages-dev flex bison gdb-arm-linux-gnueabihf
  gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf
  libc-l10n:armhf locales:armhf manpages-dev:armhf libstdc++-8-doc:armhf
  libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc
  apparmor less www-browser libmail-box-perl
Recommended packages:
  curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libwww-perl
  libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl
  libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf
  bsdmainutils cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config
  crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism
  dpkg-cross dwz file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf
  gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-base:armhf
  gcc-8-cross-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf
  gettext gettext-base groff-base intltool-debian libarchive-zip-perl
  libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross
  libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross
  libconfig-auto-perl libconfig-inifiles-perl libcroco3
  libdebian-dpkgcross-perl libfile-homedir-perl
  libfile-stripnondeterminism-perl libfile-which-perl libgcc-8-dev:armhf
  libgcc-8-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0
  libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl
  liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1
  libsigsegv2 libstdc++-8-dev:armhf libstdc++-8-dev-armhf-cross
  libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool
  libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl
  libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl
  libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf
  linux-libc-dev-armhf-cross m4 man-db po-debconf
  sbuild-build-depends-main-dummy:armhf ucf
0 upgraded, 84 newly installed, 0 to remove and 0 not upgraded.
Need to get 908 B/61.0 MB of archives.
After this operation, 233 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [908 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 908 B in 0s (0 B/s)
Selecting previously unselected package libbsd0:amd64.
(Reading database ... 12494 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ...
Unpacking libbsd0:amd64 (0.9.1-2) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ...
Unpacking bsdmainutils (11.1.2+b1) ...
Selecting previously unselected package libuchardet0:amd64.
Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ...
Unpacking libuchardet0:amd64 (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ...
Unpacking groff-base (1.22.4-3) ...
Selecting previously unselected package libpipeline1:amd64.
Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ...
Unpacking libpipeline1:amd64 (1.5.1-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ...
Unpacking man-db (2.8.5-2) ...
Selecting previously unselected package liblocale-gettext-perl.
Preparing to unpack .../06-liblocale-gettext-perl_1.07-3+b4_amd64.deb ...
Unpacking liblocale-gettext-perl (1.07-3+b4) ...
Selecting previously unselected package gcc-9-base:armhf.
Preparing to unpack .../07-gcc-9-base_9.1.0-10_armhf.deb ...
Unpacking gcc-9-base:armhf (9.1.0-10) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../08-libmagic-mgc_1%3a5.37-5_amd64.deb ...
Unpacking libmagic-mgc (1:5.37-5) ...
Selecting previously unselected package libmagic1:amd64.
Preparing to unpack .../09-libmagic1_1%3a5.37-5_amd64.deb ...
Unpacking libmagic1:amd64 (1:5.37-5) ...
Selecting previously unselected package file.
Preparing to unpack .../10-file_1%3a5.37-5_amd64.deb ...
Unpacking file (1:5.37-5) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../11-gettext-base_0.19.8.1-9_amd64.deb ...
Unpacking gettext-base (0.19.8.1-9) ...
Selecting previously unselected package ucf.
Preparing to unpack .../12-ucf_3.0038+nmu1_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038+nmu1) ...
Selecting previously unselected package libsigsegv2:amd64.
Preparing to unpack .../13-libsigsegv2_2.12-2_amd64.deb ...
Unpacking libsigsegv2:amd64 (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../14-m4_1.4.18-2_amd64.deb ...
Unpacking m4 (1.4.18-2) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../15-autoconf_2.69-11_all.deb ...
Unpacking autoconf (2.69-11) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../16-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../17-automake_1%3a1.16.1-4_all.deb ...
Unpacking automake (1:1.16.1-4) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../18-autopoint_0.19.8.1-9_all.deb ...
Unpacking autopoint (0.19.8.1-9) ...
Selecting previously unselected package binutils-arm-linux-gnueabihf.
Preparing to unpack .../19-binutils-arm-linux-gnueabihf_2.32.51.20190727-1_amd64.deb ...
Unpacking binutils-arm-linux-gnueabihf (2.32.51.20190727-1) ...
Selecting previously unselected package gcc-8-arm-linux-gnueabihf-base:amd64.
Preparing to unpack .../20-gcc-8-arm-linux-gnueabihf-base_8.3.0-19cross1_amd64.deb ...
Unpacking gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-19cross1) ...
Selecting previously unselected package cpp-8-arm-linux-gnueabihf.
Preparing to unpack .../21-cpp-8-arm-linux-gnueabihf_8.3.0-19cross1_amd64.deb ...
Unpacking cpp-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Selecting previously unselected package cpp-arm-linux-gnueabihf.
Preparing to unpack .../22-cpp-arm-linux-gnueabihf_4%3a8.3.0-1_amd64.deb ...
Unpacking cpp-arm-linux-gnueabihf (4:8.3.0-1) ...
Selecting previously unselected package cross-config.
Preparing to unpack .../23-cross-config_2.6.15-3_all.deb ...
Unpacking cross-config (2.6.15-3) ...
Selecting previously unselected package gcc-8-cross-base.
Preparing to unpack .../24-gcc-8-cross-base_8.3.0-19cross1_all.deb ...
Unpacking gcc-8-cross-base (8.3.0-19cross1) ...
Selecting previously unselected package gcc-9-cross-base.
Preparing to unpack .../25-gcc-9-cross-base_9.1.0-8cross1_all.deb ...
Unpacking gcc-9-cross-base (9.1.0-8cross1) ...
Selecting previously unselected package libc6-armhf-cross.
Preparing to unpack .../26-libc6-armhf-cross_2.28-10cross3_all.deb ...
Unpacking libc6-armhf-cross (2.28-10cross3) ...
Selecting previously unselected package libgcc1-armhf-cross.
Preparing to unpack .../27-libgcc1-armhf-cross_1%3a9.1.0-8cross1_all.deb ...
Unpacking libgcc1-armhf-cross (1:9.1.0-8cross1) ...
Selecting previously unselected package libgomp1-armhf-cross.
Preparing to unpack .../28-libgomp1-armhf-cross_9.1.0-8cross1_all.deb ...
Unpacking libgomp1-armhf-cross (9.1.0-8cross1) ...
Selecting previously unselected package libatomic1-armhf-cross.
Preparing to unpack .../29-libatomic1-armhf-cross_9.1.0-8cross1_all.deb ...
Unpacking libatomic1-armhf-cross (9.1.0-8cross1) ...
Selecting previously unselected package libasan5-armhf-cross.
Preparing to unpack .../30-libasan5-armhf-cross_9.1.0-8cross1_all.deb ...
Unpacking libasan5-armhf-cross (9.1.0-8cross1) ...
Selecting previously unselected package libstdc++6-armhf-cross.
Preparing to unpack .../31-libstdc++6-armhf-cross_9.1.0-8cross1_all.deb ...
Unpacking libstdc++6-armhf-cross (9.1.0-8cross1) ...
Selecting previously unselected package libubsan1-armhf-cross.
Preparing to unpack .../32-libubsan1-armhf-cross_9.1.0-8cross1_all.deb ...
Unpacking libubsan1-armhf-cross (9.1.0-8cross1) ...
Selecting previously unselected package libgcc-8-dev-armhf-cross.
Preparing to unpack .../33-libgcc-8-dev-armhf-cross_8.3.0-19cross1_all.deb ...
Unpacking libgcc-8-dev-armhf-cross (8.3.0-19cross1) ...
Selecting previously unselected package gcc-8-arm-linux-gnueabihf.
Preparing to unpack .../34-gcc-8-arm-linux-gnueabihf_8.3.0-19cross1_amd64.deb ...
Unpacking gcc-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Selecting previously unselected package gcc-arm-linux-gnueabihf.
Preparing to unpack .../35-gcc-arm-linux-gnueabihf_4%3a8.3.0-1_amd64.deb ...
Unpacking gcc-arm-linux-gnueabihf (4:8.3.0-1) ...
Selecting previously unselected package linux-libc-dev-armhf-cross.
Preparing to unpack .../36-linux-libc-dev-armhf-cross_4.19.37-5cross3_all.deb ...
Unpacking linux-libc-dev-armhf-cross (4.19.37-5cross3) ...
Selecting previously unselected package libc6-dev-armhf-cross.
Preparing to unpack .../37-libc6-dev-armhf-cross_2.28-10cross3_all.deb ...
Unpacking libc6-dev-armhf-cross (2.28-10cross3) ...
Selecting previously unselected package libstdc++-8-dev-armhf-cross.
Preparing to unpack .../38-libstdc++-8-dev-armhf-cross_8.3.0-19cross1_all.deb ...
Unpacking libstdc++-8-dev-armhf-cross (8.3.0-19cross1) ...
Selecting previously unselected package g++-8-arm-linux-gnueabihf.
Preparing to unpack .../39-g++-8-arm-linux-gnueabihf_8.3.0-19cross1_amd64.deb ...
Unpacking g++-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Selecting previously unselected package g++-arm-linux-gnueabihf.
Preparing to unpack .../40-g++-arm-linux-gnueabihf_4%3a8.3.0-1_amd64.deb ...
Unpacking g++-arm-linux-gnueabihf (4:8.3.0-1) ...
Selecting previously unselected package libconfig-inifiles-perl.
Preparing to unpack .../41-libconfig-inifiles-perl_3.000001-1_all.deb ...
Unpacking libconfig-inifiles-perl (3.000001-1) ...
Selecting previously unselected package libio-string-perl.
Preparing to unpack .../42-libio-string-perl_1.08-3_all.deb ...
Unpacking libio-string-perl (1.08-3) ...
Selecting previously unselected package libicu63:amd64.
Preparing to unpack .../43-libicu63_63.2-2_amd64.deb ...
Unpacking libicu63:amd64 (63.2-2) ...
Selecting previously unselected package libxml2:amd64.
Preparing to unpack .../44-libxml2_2.9.4+dfsg1-7+b3_amd64.deb ...
Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b3) ...
Selecting previously unselected package libxml-namespacesupport-perl.
Preparing to unpack .../45-libxml-namespacesupport-perl_1.12-1_all.deb ...
Unpacking libxml-namespacesupport-perl (1.12-1) ...
Selecting previously unselected package libxml-sax-base-perl.
Preparing to unpack .../46-libxml-sax-base-perl_1.09-1_all.deb ...
Unpacking libxml-sax-base-perl (1.09-1) ...
Selecting previously unselected package libxml-sax-perl.
Preparing to unpack .../47-libxml-sax-perl_1.02+dfsg-1_all.deb ...
Unpacking libxml-sax-perl (1.02+dfsg-1) ...
Selecting previously unselected package libxml-libxml-perl.
Preparing to unpack .../48-libxml-libxml-perl_2.0134+dfsg-1_amd64.deb ...
Unpacking libxml-libxml-perl (2.0134+dfsg-1) ...
Selecting previously unselected package libxml-simple-perl.
Preparing to unpack .../49-libxml-simple-perl_2.25-1_all.deb ...
Unpacking libxml-simple-perl (2.25-1) ...
Selecting previously unselected package libyaml-perl.
Preparing to unpack .../50-libyaml-perl_1.29-1_all.deb ...
Unpacking libyaml-perl (1.29-1) ...
Selecting previously unselected package libconfig-auto-perl.
Preparing to unpack .../51-libconfig-auto-perl_0.44-1_all.deb ...
Unpacking libconfig-auto-perl (0.44-1) ...
Selecting previously unselected package libfile-which-perl.
Preparing to unpack .../52-libfile-which-perl_1.23-1_all.deb ...
Unpacking libfile-which-perl (1.23-1) ...
Selecting previously unselected package libfile-homedir-perl.
Preparing to unpack .../53-libfile-homedir-perl_1.004-1_all.deb ...
Unpacking libfile-homedir-perl (1.004-1) ...
Selecting previously unselected package libdebian-dpkgcross-perl.
Preparing to unpack .../54-libdebian-dpkgcross-perl_2.6.15-3_all.deb ...
Unpacking libdebian-dpkgcross-perl (2.6.15-3) ...
Selecting previously unselected package dpkg-cross.
Preparing to unpack .../55-dpkg-cross_2.6.15-3_all.deb ...
Unpacking dpkg-cross (2.6.15-3) ...
Selecting previously unselected package crossbuild-essential-armhf.
Preparing to unpack .../56-crossbuild-essential-armhf_12.6_all.deb ...
Unpacking crossbuild-essential-armhf (12.6) ...
Selecting previously unselected package libtool.
Preparing to unpack .../57-libtool_2.4.6-10_all.deb ...
Unpacking libtool (2.4.6-10) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../58-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../59-libarchive-zip-perl_1.64-1_all.deb ...
Unpacking libarchive-zip-perl (1.64-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../60-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../61-libfile-stripnondeterminism-perl_1.4.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.4.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../62-dh-strip-nondeterminism_1.4.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.4.0-1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../63-dwz_0.12.20190723-1_amd64.deb ...
Unpacking dwz (0.12.20190723-1) ...
Selecting previously unselected package libglib2.0-0:amd64.
Preparing to unpack .../64-libglib2.0-0_2.60.6-1_amd64.deb ...
Unpacking libglib2.0-0:amd64 (2.60.6-1) ...
Selecting previously unselected package libcroco3:amd64.
Preparing to unpack .../65-libcroco3_0.6.12-3_amd64.deb ...
Unpacking libcroco3:amd64 (0.6.12-3) ...
Selecting previously unselected package libncurses6:amd64.
Preparing to unpack .../66-libncurses6_6.1+20190713-2_amd64.deb ...
Unpacking libncurses6:amd64 (6.1+20190713-2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../67-gettext_0.19.8.1-9_amd64.deb ...
Unpacking gettext (0.19.8.1-9) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../68-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../69-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../70-debhelper_12.2.3_all.deb ...
Unpacking debhelper (12.2.3) ...
Selecting previously unselected package gcc-8-base:armhf.
Preparing to unpack .../71-gcc-8-base_8.3.0-19_armhf.deb ...
Unpacking gcc-8-base:armhf (8.3.0-19) ...
Selecting previously unselected package libgcc1:armhf.
Preparing to unpack .../72-libgcc1_1%3a9.1.0-10_armhf.deb ...
Unpacking libgcc1:armhf (1:9.1.0-10) ...
Selecting previously unselected package libc6:armhf.
Preparing to unpack .../73-libc6_2.28-10_armhf.deb ...
Unpacking libc6:armhf (2.28-10) ...
Selecting previously unselected package libasan5:armhf.
Preparing to unpack .../74-libasan5_9.1.0-10_armhf.deb ...
Unpacking libasan5:armhf (9.1.0-10) ...
Selecting previously unselected package libatomic1:armhf.
Preparing to unpack .../75-libatomic1_9.1.0-10_armhf.deb ...
Unpacking libatomic1:armhf (9.1.0-10) ...
Selecting previously unselected package linux-libc-dev:armhf.
Preparing to unpack .../76-linux-libc-dev_4.19.37-6_armhf.deb ...
Unpacking linux-libc-dev:armhf (4.19.37-6) ...
Selecting previously unselected package libc6-dev:armhf.
Preparing to unpack .../77-libc6-dev_2.28-10_armhf.deb ...
Unpacking libc6-dev:armhf (2.28-10) ...
Selecting previously unselected package libgomp1:armhf.
Preparing to unpack .../78-libgomp1_9.1.0-10_armhf.deb ...
Unpacking libgomp1:armhf (9.1.0-10) ...
Selecting previously unselected package libstdc++6:armhf.
Preparing to unpack .../79-libstdc++6_9.1.0-10_armhf.deb ...
Unpacking libstdc++6:armhf (9.1.0-10) ...
Selecting previously unselected package libubsan1:armhf.
Preparing to unpack .../80-libubsan1_9.1.0-10_armhf.deb ...
Unpacking libubsan1:armhf (9.1.0-10) ...
Selecting previously unselected package libgcc-8-dev:armhf.
Preparing to unpack .../81-libgcc-8-dev_8.3.0-19_armhf.deb ...
Unpacking libgcc-8-dev:armhf (8.3.0-19) ...
Selecting previously unselected package libstdc++-8-dev:armhf.
Preparing to unpack .../82-libstdc++-8-dev_8.3.0-19_armhf.deb ...
Unpacking libstdc++-8-dev:armhf (8.3.0-19) ...
Selecting previously unselected package sbuild-build-depends-main-dummy:armhf.
Preparing to unpack .../83-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ...
Setting up libconfig-inifiles-perl (3.000001-1) ...
Setting up libpipeline1:amd64 (1.5.1-2) ...
Setting up libfile-which-perl (1.23-1) ...
Setting up libc6-armhf-cross (2.28-10cross3) ...
Setting up libmagic-mgc (1:5.37-5) ...
Setting up libarchive-zip-perl (1.64-1) ...
Setting up libglib2.0-0:amd64 (2.60.6-1) ...
No schema files found: doing nothing.
Setting up gcc-8-cross-base (8.3.0-19cross1) ...
Setting up libmagic1:amd64 (1:5.37-5) ...
Setting up linux-libc-dev:armhf (4.19.37-6) ...
Setting up libxml-namespacesupport-perl (1.12-1) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up file (1:5.37-5) ...
Setting up libyaml-perl (1.29-1) ...
Setting up libicu63:amd64 (63.2-2) ...
Setting up libxml-sax-base-perl (1.09-1) ...
Setting up libio-string-perl (1.08-3) ...
Setting up autotools-dev (20180224.1) ...
Setting up cross-config (2.6.15-3) ...
Setting up gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-19cross1) ...
Setting up libncurses6:amd64 (6.1+20190713-2) ...
Setting up libsigsegv2:amd64 (2.12-2) ...
Setting up gcc-8-base:armhf (8.3.0-19) ...
Setting up linux-libc-dev-armhf-cross (4.19.37-5cross3) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up ucf (3.0038+nmu1) ...
Setting up gcc-9-cross-base (9.1.0-8cross1) ...
Setting up dwz (0.12.20190723-1) ...
Setting up libuchardet0:amd64 (0.0.6-3) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libfile-homedir-perl (1.004-1) ...
Setting up libbsd0:amd64 (0.9.1-2) ...
Setting up binutils-arm-linux-gnueabihf (2.32.51.20190727-1) ...
Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ...
Setting up liblocale-gettext-perl (1.07-3+b4) ...
Setting up gcc-9-base:armhf (9.1.0-10) ...
Setting up cpp-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Setting up libgomp1-armhf-cross (9.1.0-8cross1) ...
Setting up libfile-stripnondeterminism-perl (1.4.0-1) ...
Setting up libtool (2.4.6-10) ...
Setting up libc6-dev-armhf-cross (2.28-10cross3) ...
Setting up m4 (1.4.18-2) ...
Setting up libatomic1-armhf-cross (9.1.0-8cross1) ...
Setting up libxml-sax-perl (1.02+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...

Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libgcc1-armhf-cross (1:9.1.0-8cross1) ...
Setting up bsdmainutils (11.1.2+b1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libcroco3:amd64 (0.6.12-3) ...
Setting up autoconf (2.69-11) ...
Setting up libxml-libxml-perl (2.0134+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up groff-base (1.22.4-3) ...
Setting up cpp-arm-linux-gnueabihf (4:8.3.0-1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-9) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libasan5-armhf-cross (9.1.0-8cross1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libstdc++6-armhf-cross (9.1.0-8cross1) ...
Setting up libubsan1-armhf-cross (9.1.0-8cross1) ...
Setting up libxml-simple-perl (2.25-1) ...
Setting up libgcc-8-dev-armhf-cross (8.3.0-19cross1) ...
Setting up libstdc++-8-dev-armhf-cross (8.3.0-19cross1) ...
Setting up gcc-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Setting up gcc-arm-linux-gnueabihf (4:8.3.0-1) ...
Setting up po-debconf (1.0.21) ...
Setting up libconfig-auto-perl (0.44-1) ...
Setting up g++-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Setting up libdebian-dpkgcross-perl (2.6.15-3) ...
Setting up g++-arm-linux-gnueabihf (4:8.3.0-1) ...
Setting up dpkg-cross (2.6.15-3) ...
Setting up crossbuild-essential-armhf (12.6) ...
Setting up libc6:armhf (2.28-10) ...
Setting up libc6-dev:armhf (2.28-10) ...
Setting up libgcc1:armhf (1:9.1.0-10) ...
Setting up libgomp1:armhf (9.1.0-10) ...
Setting up dh-autoreconf (19) ...
Setting up libasan5:armhf (9.1.0-10) ...
Setting up libatomic1:armhf (9.1.0-10) ...
Setting up dh-strip-nondeterminism (1.4.0-1) ...
Setting up libstdc++6:armhf (9.1.0-10) ...
Setting up debhelper (12.2.3) ...
Setting up libubsan1:armhf (9.1.0-10) ...
Setting up libgcc-8-dev:armhf (8.3.0-19) ...
Setting up libstdc++-8-dev:armhf (8.3.0-19) ...
Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ...
Processing triggers for libc-bin (2.28-10) ...
Processing triggers for ccache (3.7.2-2) ...
Updating symlinks in /usr/lib/ccache ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Initial Foreign Architectures: armhf 
Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 3.16.0-4-amd64 #1 SMP Debian 3.16.51-3 (2017-12-13) amd64 (x86_64)
Toolchain package versions: binutils_2.32.51.20190727-1 dpkg-dev_1.19.7 g++-8_8.3.0-19 gcc-8_8.3.0-19 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-19 libstdc++-8-dev-armhf-cross_8.3.0-19cross1 libstdc++6_9.1.0-10 libstdc++6-armhf-cross_9.1.0-8cross1 linux-libc-dev_4.19.37-6
Package versions: adduser_3.118 apt_1.8.2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-4 binutils_2.32.51.20190727-1 binutils-arm-linux-gnueabihf_2.32.51.20190727-1 binutils-common_2.32.51.20190727-1 binutils-x86-64-linux-gnu_2.32.51.20190727-1 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.6 bzip2_1.0.6-9.2 ccache_3.7.2-2 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-19 cpp-8-arm-linux-gnueabihf_8.3.0-19cross1 cpp-arm-linux-gnueabihf_4:8.3.0-1 cross-config_2.6.15-3 crossbuild-essential-armhf_12.6 dash_0.5.10.2-6 debconf_1.5.72 debhelper_12.2.3 debian-archive-keyring_2019.1 debianutils_4.8.6.3 dh-autoreconf_19 dh-strip-nondeterminism_1.4.0-1 diffutils_1:3.7-3 dirmngr_2.2.17-3 dose-distcheck_5.0.1-12+b1 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.12.20190723-1 e2fsprogs_1.45.3-3 eatmydata_105-7 fakeroot_1.23-1 fdisk_2.34-0.1 file_1:5.37-5 findutils_4.6.0+git+20190510-2 g++_4:8.3.0-1 g++-8_8.3.0-19 g++-8-arm-linux-gnueabihf_8.3.0-19cross1 g++-arm-linux-gnueabihf_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-19 gcc-8-arm-linux-gnueabihf_8.3.0-19cross1 gcc-8-arm-linux-gnueabihf-base_8.3.0-19cross1 gcc-8-base_8.3.0-19 gcc-8-cross-base_8.3.0-19cross1 gcc-9-base_9.1.0-10 gcc-9-cross-base_9.1.0-8cross1 gcc-arm-linux-gnueabihf_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.17-3 gnupg-l10n_2.2.17-3 gnupg-utils_2.2.17-3 gpg_2.2.17-3 gpg-agent_2.2.17-3 gpg-wks-client_2.2.17-3 gpg-wks-server_2.2.17-3 gpgconf_2.2.17-3 gpgsm_2.2.17-3 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.2 libarchive-zip-perl_1.64-1 libasan5_9.1.0-10 libasan5-armhf-cross_9.1.0-8cross1 libassuan0_2.5.3-7 libatomic1_9.1.0-10 libatomic1-armhf-cross_9.1.0-8cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libbinutils_2.32.51.20190727-1 libblkid1_2.34-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9.2 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-armhf-cross_2.28-10cross3 libc6-dev_2.28-10 libc6-dev-armhf-cross_2.28-10cross3 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_9.1.0-10 libcom-err2_1.45.3-3 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libeatmydata1_105-7 libelf1_0.176-1.1 libext2fs2_1.45.3-3 libfakeroot_1.23-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.4.0-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-19 libgcc-8-dev-armhf-cross_8.3.0-19cross1 libgcc1_1:9.1.0-10 libgcc1-armhf-cross_1:9.1.0-8cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4+b1 libgdbm6_1.18.1-4+b1 libglib2.0-0_2.60.6-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.9-3 libgomp1_9.1.0-10 libgomp1-armhf-cross_9.1.0-8cross1 libgpg-error0_1.36-7 libhogweed4_3.4.1-1 libicu63_63.2-2 libidn2-0_2.2.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_9.1.0-10 libksba8_1.3.5-2 libldap-2.4-2_2.4.48+dfsg-1 libldap-common_2.4.48+dfsg-1 liblocale-gettext-perl_1.07-3+b4 liblsan0_9.1.0-10 liblua5.2-0_5.2.4-1.1+b3 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-5 libmagic1_1:5.37-5 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-19 libncurses6_6.1+20190713-2 libncursesw6_6.1+20190713-2 libnettle6_3.4.1-1 libnpth0_1.6-1 libnspr4_2:4.21-1 libnss3_2:3.45-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.32-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libpopt0_1.16-12 libquadmath0_9.1.0-10 libreadline7_7.0-5 libreadline8_8.0-2 librpm8_4.14.2.1+dfsg1-1 librpmio8_4.14.2.1+dfsg1-1 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.4.1-2 libselinux1_2.9-2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.29.0-1 libss2_1.45.3-3 libstdc++-8-dev_8.3.0-19 libstdc++-8-dev-armhf-cross_8.3.0-19cross1 libstdc++6_9.1.0-10 libstdc++6-armhf-cross_9.1.0-8cross1 libsub-override-perl_0.09-2 libsystemd0_241-7 libtasn1-6_4.14-2 libtinfo6_6.1+20190713-2 libtool_2.4.6-10 libtsan0_9.1.0-10 libubsan1_9.1.0-10 libubsan1-armhf-cross_9.1.0-8cross1 libuchardet0_0.0.6-3 libudev1_241-7 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.29-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.37-6 linux-libc-dev-armhf-cross_4.19.37-5cross3 login_1:4.7-2 logsave_1.45.3-3 lsb-base_10.2019051400 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.34-0.1 ncurses-base_6.1+20190713-2 ncurses-bin_6.1+20190713-2 passwd_1:4.7-2 patch_2.7.6-6 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 pinentry-curses_1.1.0-3 po-debconf_1.0.21 readline-common_8.0-2 sbuild-build-depends-dose3-dummy_0.invalid.0 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.95-4 tar_1.30+dfsg-6 tzdata_2019b-1 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: mafft
Binary: mafft
Architecture: any
Version: 7.429-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>, Andreas Tille <tille@debian.org>
Homepage: http://mafft.cbrc.jp/alignment/software/
Standards-Version: 4.4.0
Vcs-Browser: https://salsa.debian.org/med-team/mafft
Vcs-Git: https://salsa.debian.org/med-team/mafft.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 12)
Package-List:
 mafft deb science optional arch=any
Checksums-Sha1:
 c7e50bb1ff43140ce7d67691a0a4c2c82981542a 604929 mafft_7.429.orig.tar.gz
 a8cf6f20b60e5d9226af8f063dd092cc07fafdbb 6588 mafft_7.429-1.debian.tar.xz
Checksums-Sha256:
 6e22e0d6130862c67233ab3a13a70febf7f5a1e0a8ab0d73420ca70496b167bc 604929 mafft_7.429.orig.tar.gz
 d0d63d2fc2a7e812e7d59bf7a9f482eab8ef48923e71e451f9405fd048f09920 6588 mafft_7.429-1.debian.tar.xz
Files:
 5a561c68604fc9b63001eeb0d6966912 604929 mafft_7.429.orig.tar.gz
 f82cebc8ecdb3887125c799a1f845935 6588 mafft_7.429-1.debian.tar.xz

-----BEGIN PGP SIGNATURE-----
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=gsYC
-----END PGP SIGNATURE-----

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sat Jul 27 11:06:11 2019 UTC
gpgv:                using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1
gpgv:                issuer "moeller@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./mafft_7.429-1.dsc
dpkg-source: info: extracting mafft in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking mafft_7.429.orig.tar.gz
dpkg-source: info: unpacking mafft_7.429-1.debian.tar.xz

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
CCACHE_COMPRESS=1
CCACHE_DIR=/var/cache/ccache-sbuild
CCACHE_UMASK=002
CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf
DEB_BUILD_OPTIONS=nocheck
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LD_LIBRARY_PATH=/usr/lib/libeatmydata
LD_PRELOAD=libeatmydata.so
LOGNAME=build
PATH=/usr/lib/ccache:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SCHROOT_ALIAS_NAME=unstable-amd64-sbuild
SCHROOT_CHROOT_NAME=unstable-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1000
SCHROOT_GROUP=build
SCHROOT_SESSION_ID=unstable-amd64-sbuild-48d7d77c-263b-447d-8666-2d3dbe0c4e96
SCHROOT_UID=1000
SCHROOT_USER=build
SHELL=/bin/sh
USER=build

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot -j16
dpkg-buildpackage: info: source package mafft
dpkg-buildpackage: info: source version 7.429-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Steffen Moeller <moeller@debian.org>
dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean --sourcedirectory=core
   dh_auto_clean -O--sourcedirectory=core
	cd core && make -j16 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>/core'
rm -f *.o *.a *.exe *~ mafftash_premafft.pl seekquencer_premafft.pl dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore replaceu restoreu setdirection makedirectionlist version  mafft mafft-homologs.rb mafft-sparsecore.rb libdisttbfast.so libdisttbfast.dylib libdisttbfast.dll *.gcda *.gcno 
make[1]: Leaving directory '/<<PKGBUILDDIR>>/core'
   dh_autoreconf_clean -O--sourcedirectory=core
   debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -rf binaries/* scripts/*
dh_clean
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 debian/rules build-arch
dh build-arch --sourcedirectory=core
   dh_update_autotools_config -a -O--sourcedirectory=core
   dh_autoreconf -a -O--sourcedirectory=core
   dh_auto_configure -a -O--sourcedirectory=core
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build -- \
  PREFIX=/usr/lib/mafft \
  ENABLE_MULTITHREAD=-Denablemultithread \
  LIBDIR=/usr/lib/mafft/lib/mafft \
  CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" \
  LDFLAGS="-Wl,-z,relro -Wl,-z,now"
	cd core && make -j16 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc PREFIX=/usr/lib/mafft ENABLE_MULTITHREAD=-Denablemultithread LIBDIR=/usr/lib/mafft/lib/mafft "CFLAGS=-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-z,relro -Wl,-z,now"
make[2]: Entering directory '/<<PKGBUILDDIR>>/core'
cp mafftash_premafft.tmpl mafftash_premafft.pl
cp seekquencer_premafft.tmpl seekquencer_premafft.pl
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mtxutl.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c io.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mltaln9.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tddis.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c constants.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nj.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c partSalignmm.c  
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Lalignmm.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rna.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Salignmm.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Dalignmm.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Falign.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Falign_localhom.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Galign11.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Lalign11.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c genalign11.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MSalignmm.c 
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from nj.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from rna.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
rna.c: In function ‘rnaalifoldcall’:
rna.c:225:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( cmd );
  ^~~~~~~~~~~~~
rna.c:245:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
rna.c:285:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( cmd );
  ^~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from genalign11.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from Lalign11.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fftFunctions.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from Galign11.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fft.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tditeration.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dvtditr.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c defs.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from Falign_localhom.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c SAalignmm.c -o SAalignmm.o
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from tddis.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from fftFunctions.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c treeOperation.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from Lalignmm.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c addfunctions.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dndfast7.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from fft.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dndblast.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from SAalignmm.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from defs.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sextet5.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from partSalignmm.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from treeOperation.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from Falign.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mafft-distance.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MSalign11.c 
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c suboptalign11.c 
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from Salignmm.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pairlocalalignmain.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pairlocalalign.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from pairlocalalignmain.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c multi2hat3s.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from dndblast.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
dndblast.c: In function ‘main’:
dndblast.c:201:4: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
    system( com );
    ^~~~~~~~~~~~~
dndblast.c:382:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com );
  ^~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from mafft-distance.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pairash.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c addsingle.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from dvtditr.c:4:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
dvtditr.c: In function ‘main’:
dvtditr.c:1020:5: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
     system( "cp infile.tree GuideTree" ); // tekitou
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from dndfast7.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
dndfast7.c: In function ‘main’:
dndfast7.c:326:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com );
  ^~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -o maffttext2hex maffttext2hex.c  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
maffttext2hex.c: In function ‘main’:
maffttext2hex.c:55:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( (char *)buf, 999, fp );
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -o hex2maffttext hex2maffttext.c  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from suboptalign11.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c splittbfast.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c disttbfast.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from constants.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from constants.c:7:
blosum.c: In function ‘overridematrix’:
blosum.c:369:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( buf, 499, fp );
   ^~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tbfast.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from sextet5.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nodepair.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mafft-profile.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from tditeration.c:9:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c f2cl.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from Dalignmm.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mccaskillwrap.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from MSalign11.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from multi2hat3s.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c contrafoldwrap.c
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c countlen.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from io.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
io.c: In function ‘PreRead’:
io.c:1065:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( b, B-1, fp ); *locnjob = atoi( b );
  ^~~~~~~~~~~~~~~~~~~
io.c:1070:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( b, B-1, fp );
   ^~~~~~~~~~~~~~~~~~~
io.c:1074:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp ); nleni = atoi( b );
    ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘FRead’:
io.c:1110:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( b, B-1, fp );
  ^~~~~~~~~~~~~~~~~~~
io.c:1200:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( b, B-1, fp ); nlen[i] = atoi( b );      /* seq i no nagasa */
   ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘readhat2_doublehalf_part_pointer’:
io.c:2635:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c:2636:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 )
     ^~~~~~~~~~~~~~~~~
io.c:2641:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c: In function ‘readhat2_doublehalf_pointer’:
io.c:2671:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c:2672:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 )
     ^~~~~~~~~~~~~~~~~
io.c:2677:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c: In function ‘readhat2_doublehalf’:
io.c:2705:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c:2706:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." );
     ^~~~~~~~~~~~~~~~~
io.c:2707:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c: In function ‘readhat2_double’:
io.c:2735:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c:2736:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." );
     ^~~~~~~~~~~~~~~~~
io.c:2737:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c: In function ‘readhat2_int’:
io.c:2765:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c:2766:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." );
     ^~~~~~~~~~~~~~~~~
io.c:2767:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c: In function ‘readhat2_pointer’:
io.c:2796:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c:2797:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." );
     ^~~~~~~~~~~~~~~~~
io.c:2798:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c: In function ‘readhat2’:
io.c:2826:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c:2827:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." );
     ^~~~~~~~~~~~~~~~~
io.c:2828:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
     fgets( b, B, fp );
     ^~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta_sub’:
io.c:3028:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c:3043:13: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
             fgets( b, B-1, fp );
             ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadSsearch’:
io.c:3062:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadBlastm7_avscore’:
io.c:3190:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( b, B-1, fp );
   ^~~~~~~~~~~~~~~~~~~
io.c:3197:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c:3198:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadBlastm7_scoreonly’:
io.c:3313:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( b, B-1, fp );
   ^~~~~~~~~~~~~~~~~~~
io.c:3320:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c:3321:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadBlastm7’:
io.c:3431:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( b, B-1, fp );
   ^~~~~~~~~~~~~~~~~~~
io.c:3438:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c:3439:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta34noalign’:
io.c:3463:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta34m10_nuc’:
io.c:3500:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c:3526:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta34m10’:
io.c:3639:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c:3663:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( b, B-1, fp );
    ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta34m10_scoreonly_nucbk’:
io.c:3766:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta34m10_scoreonly_nuc’:
io.c:3816:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta34m10_scoreonly’:
io.c:3877:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta34’:
io.c:3933:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c:3959:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
          fgets( b, B-1, fp ); // initn:
          ^~~~~~~~~~~~~~~~~~~
io.c:3962:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
          fgets( b, B-1, fp ); // Smith-Waterman score
          ^~~~~~~~~~~~~~~~~~~
io.c:3974:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta3’:
io.c:3996:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadFasta’:
io.c:4021:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadOpt’:
io.c:4058:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘ReadOpt2’:
io.c:4079:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
         fgets( b, B-1, fp );
         ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘readOtherOptions’:
io.c:4175:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( b, B-1, fp );
   ^~~~~~~~~~~~~~~~~~~
io.c: In function ‘loadaamtx’:
io.c:5433:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( inorder, 999, mf );
   ^~~~~~~~~~~~~~~~~~~~~~~~~
io.c:5465:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, mf );
   ^~~~~~~~~~~~~~~~~~~~~~
io.c:5488:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, mf );
   ^~~~~~~~~~~~~~~~~~~~~~
io.c: In function ‘readsubalignmentstable’:
io.c:5644:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( line, linelen-1, fp );
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
io.c:5665:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( line, linelen-1, fp );
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
io.c: In function ‘readmccaskill’:
io.c:5719:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( gett, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~~
io.c:5729:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
io.c: In function ‘readpairfoldalign’:
io.c:5788:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
io.c:5801:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
io.c:5808:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
io.c:5822:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
io.c:5828:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c seq2regtable.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from addfunctions.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c regtable2seq.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from MSalignmm.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c score.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from nodepair.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c getlag.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from pairash.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
pairash.c: In function ‘prepareash’:
pairash.c:639:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
pairash.c:681:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
pairash.c: In function ‘callrash’:
pairash.c:485:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( com );
   ^~~~~~~~~~~~~
pairash.c: In function ‘readrash’:
pairash.c:277:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
pairash.c:284:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( line, 999, fp );
    ^~~~~~~~~~~~~~~~~~~~~~
pairash.c:289:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( line, 999, fp );
    ^~~~~~~~~~~~~~~~~~~~~~
pairash.c:294:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( line, 999, fp );
    ^~~~~~~~~~~~~~~~~~~~~~
pairash.c: In function ‘preparetmalign’:
pairash.c:530:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
pairash.c:576:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
pairash.c:587:4: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
    system( command );
    ^~~~~~~~~~~~~~~~~
pairash.c: In function ‘checkcbeta’:
pairash.c:321:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( linec, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~~
pairash.c: In function ‘calltmalign’:
pairash.c:347:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( com );
   ^~~~~~~~~~~~~
pairash.c:356:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( com, 100, fp );
    ^~~~~~~~~~~~~~~~~~~~~
pairash.c: In function ‘readtmalign’:
pairash.c:228:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
pairash.c:232:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( line, nlenmax*2, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c:235:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( line, nlenmax*2, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c:238:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( line, nlenmax*2, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c: In function ‘callrash.isra.1’:
pairash.c:428:29: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 9999 [-Wformat-overflow=]
   sprintf( cachefile, "%s/%s.%s.rash", cachedir, fname1, fname2 );
                             ^
In file included from /usr/arm-linux-gnueabihf/include/stdio.h:873,
                 from mltaln.h:13,
                 from pairash.c:1:
/usr/arm-linux-gnueabihf/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 8 or more bytes (assuming 10007) into a destination of size 10000
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c:484:22: warning: ‘%s’ directive writing up to 9999 bytes into a region of size 9996 [-Wformat-overflow=]
   sprintf( com, "cat %s > %s.rashout", cachefile, pairid );
                      ^~                ~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/stdio.h:873,
                 from mltaln.h:13,
                 from pairash.c:1:
/usr/arm-linux-gnueabihf/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 16 and 11014 bytes into a destination of size 10000
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c: In function ‘calltmalign.isra.2’:
pairash.c:346:27: warning: ‘%s’ directive writing up to 9999 bytes into a region of size 9991 [-Wformat-overflow=]
   sprintf( com, "mkdir -p %s", cachedir );
                           ^~   ~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/stdio.h:873,
                 from mltaln.h:13,
                 from pairash.c:1:
/usr/arm-linux-gnueabihf/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 10 and 10009 bytes into a destination of size 10000
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c:349:31: warning: ‘-’ directive writing 1 byte into a region of size between 0 and 9999 [-Wformat-overflow=]
   sprintf( cachefile, "%s/%s%s-%s%s", cachedir, fname1, chain1, fname2, chain2 );
                               ^
In file included from /usr/arm-linux-gnueabihf/include/stdio.h:873,
                 from mltaln.h:13,
                 from pairash.c:1:
/usr/arm-linux-gnueabihf/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 3 or more bytes (assuming 10002) into a destination of size 10000
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c: In function ‘preparetmalign.constprop’:
pairash.c:586:29: warning: ‘%s’ directive writing up to 999 bytes into a region of size 996 [-Wformat-overflow=]
    sprintf( command, "cp %s %s.pdb", sline, fname );
                             ^~              ~~~~~
In file included from /usr/arm-linux-gnueabihf/include/stdio.h:873,
                 from mltaln.h:13,
                 from pairash.c:1:
/usr/arm-linux-gnueabihf/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 9 or more bytes (assuming 1008) into a destination of size 1000
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pairash.c:588:44: warning: ‘%s’ directive writing up to 999 bytes into a region of size 983 [-Wformat-overflow=]
    sprintf( command, "perl \"%s/clean.pl\" %s.pdb", whereispairalign, fname );
                                            ^~                         ~~~~~
In file included from /usr/arm-linux-gnueabihf/include/stdio.h:873,
                 from mltaln.h:13,
                 from pairash.c:1:
/usr/arm-linux-gnueabihf/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 22 or more bytes (assuming 1021) into a destination of size 1000
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dndpre.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from mafft-profile.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c setcore.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from f2cl.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
f2cl.c: In function ‘main’:
f2cl.c:287:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( gett, B-1, orderfp );
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c replaceu.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from countlen.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c restoreu.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from seq2regtable.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c setdirection.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from contrafoldwrap.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
contrafoldwrap.c: In function ‘readcontrafold’:
contrafoldwrap.c:57:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 9999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c makedirectionlist.c
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from mccaskillwrap.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
mccaskillwrap.c: In function ‘main’:
mccaskillwrap.c:372:4: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
    system( "tr -d '\\r' < _mccaskillinorg > _mccaskillin" ); // for cygwin, wakaran
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mccaskillwrap.c: In function ‘athread’:
mccaskillwrap.c:115:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( com );
   ^~~~~~~~~~~~~
mccaskillwrap.c:117:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( com );
   ^~~~~~~~~~~~~
mccaskillwrap.c:129:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( com ); // for cygwin, wakaran
   ^~~~~~~~~~~~~
mccaskillwrap.c:155:4: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
    system( com );
    ^~~~~~~~~~~~~
mccaskillwrap.c: In function ‘readrawmccaskill’:
mccaskillwrap.c:46:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -o version version.c  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread 
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from regtable2seq.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
regtable2seq.c: In function ‘readereg’:
regtable2seq.c:69:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( gett, 999, regfp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~
regtable2seq.c:97:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, regfp );
   ^~~~~~~~~~~~~~~~~~~~~~~~~
regtable2seq.c: In function ‘readreg’:
regtable2seq.c:120:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 999, regfp );
   ^~~~~~~~~~~~~~~~~~~~~~~~~
sed "s:_LIBDIR:/usr/lib/mafft/lib/mafft:" mafft.tmpl  > mafft
sed "s:_BINDIR:/usr/lib/mafft/bin:" mafft-homologs.tmpl  > mafft-homologs.rb
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from version.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
sed "s:_BINDIR:/usr/lib/mafft/bin:" mafft-sparsecore.tmpl  > mafft-sparsecore.rb
arm-linux-gnueabihf-gcc -o f2cl mtxutl.o io.o f2cl.o constants.o defs.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o countlen mtxutl.o io.o countlen.o defs.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from score.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
arm-linux-gnueabihf-gcc -o seq2regtable mtxutl.o io.o seq2regtable.o defs.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from replaceu.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from pairlocalalign.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
pairlocalalign.c: In function ‘calllast_once’:
pairlocalalign.c:1055:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( command );
   ^~~~~~~~~~~~~~~~~
pairlocalalign.c:1091:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( command );
   ^~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘readlastresx’:
pairlocalalign.c:607:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 9999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘calllast_fast’:
pairlocalalign.c:980:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( command );
   ^~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘lastcallthread’:
pairlocalalign.c:871:5: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
     system( command );
     ^~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘readlastresx_singleq’:
pairlocalalign.c:373:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( gett, 9999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘readhat4’:
pairlocalalign.c:1531:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( oneline, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c:1543:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( oneline, 999, fp );
   ^~~~~~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘recalllara’:
pairlocalalign.c:1244:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( com, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘callmxscarna_giving_bpp’:
pairlocalalign.c:1407:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com );
  ^~~~~~~~~~~~~
pairlocalalign.c:1409:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com );
  ^~~~~~~~~~~~~
pairlocalalign.c:1429:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com ); // for cygwin, wakaran
  ^~~~~~~~~~~~~
pairlocalalign.c:1450:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com ); // for cygwin, wakaran
  ^~~~~~~~~~~~~
pairlocalalign.c:1464:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com ); // for cygwin, wakaran
  ^~~~~~~~~~~~~
pairlocalalign.c:1484:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( com, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c:1486:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( com, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘calldafs_giving_bpp’:
pairlocalalign.c:1290:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com );
  ^~~~~~~~~~~~~
pairlocalalign.c:1292:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com );
  ^~~~~~~~~~~~~
pairlocalalign.c:1312:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com ); // for cygwin, wakaran
  ^~~~~~~~~~~~~
pairlocalalign.c:1333:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com ); // for cygwin, wakaran
  ^~~~~~~~~~~~~
pairlocalalign.c:1343:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( com ); // for cygwin, wakaran
  ^~~~~~~~~~~~~
pairlocalalign.c:1363:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( com, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c:1365:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( com, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c:1367:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( com, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c: In function ‘pairalign_node’:
pairlocalalign.c:3438:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( "rm -rf hat3dir" ); // toriaezu
  ^~~~~~~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c:3439:2: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system( "mkdir hat3dir" ); // toriaezu
  ^~~~~~~~~~~~~~~~~~~~~~~~~
pairlocalalign.c:3444:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( fn );
   ^~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from getlag.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from dndpre.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from setdirection.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
setdirection.c: In function ‘main’:
setdirection.c:132:3: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
   fgets( line, 99, difp );
   ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from restoreu.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
restoreu.c: In function ‘main’:
restoreu.c:177:4: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
    fgets( gett, 999, dlfp );
    ^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from setcore.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from splittbfast.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
splittbfast.c: In function ‘main’:
splittbfast.c:3218:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
   system( com );
   ^~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from addsingle.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from makedirectionlist.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from tbfast.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
tbfast.c: In function ‘main’:
tbfast.c:3190:5: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
     system( "cp infile.tree GuideTree" ); // tekitou
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from disttbfast.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
disttbfast.c: In function ‘disttbfast’:
disttbfast.c:3638:6: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
      system( "cp infile.tree GuideTree" ); // tekitou
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/bits/libc-header-start.h:33,
                 from /usr/arm-linux-gnueabihf/include/stdio.h:27,
                 from mltaln.h:13,
                 from mltaln9.c:1:
/usr/arm-linux-gnueabihf/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
mltaln9.c: In function ‘check_guidetreefile’:
mltaln9.c:2802:2: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets( string, 999, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~
mltaln9.c: In function ‘readlocalhomtable2_single_bin_noseek’:
mltaln9.c:15112:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result]
  fread( &size, sizeof( int ), 1, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mltaln9.c:15113:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result]
  fread( &opt, sizeof( double ), 1, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mltaln9.c:15116:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result]
  fread( m, size*sizeof( int ), 3, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mltaln9.c:15152:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result]
  fread( &c, sizeof( char ), 1, fp );
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mltaln9.c: In function ‘createchain’:
mltaln9.c:2065:17: warning: argument 1 range [2147483648, 4294967295] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=]
   instanttree = calloc( treelen, sizeof( char ) );
                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from mltaln.h:14,
                 from mltaln9.c:1:
/usr/arm-linux-gnueabihf/include/stdlib.h:541:14: note: in a call to allocation function ‘calloc’ declared here
 extern void *calloc (size_t __nmemb, size_t __size)
              ^~~~~~
mltaln9.c:2076:10: warning: argument 1 range [2147483648, 4294967295] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=]
  order = calloc( nseq, sizeof( int ) );
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from mltaln.h:14,
                 from mltaln9.c:1:
/usr/arm-linux-gnueabihf/include/stdlib.h:541:14: note: in a call to allocation function ‘calloc’ declared here
 extern void *calloc (size_t __nmemb, size_t __size)
              ^~~~~~
In file included from /usr/arm-linux-gnueabihf/include/stdio.h:873,
                 from mltaln.h:13,
                 from mltaln9.c:1:
In function ‘fgets’,
    inlined from ‘check_guidetreefile’ at mltaln9.c:2802:2:
/usr/arm-linux-gnueabihf/include/bits/stdio2.h:263:9: warning: call to ‘__fgets_chk_warn’ declared with attribute warning: fgets called with bigger size than length of destination buffer
  return __fgets_chk_warn (__s, __bos (__s), __n, __stream);
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -o dvtditr mtxutl.o io.o mltaln9.o tddis.o constants.o nj.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o MSalignmm.o fftFunctions.o fft.o tditeration.o dvtditr.o defs.o SAalignmm.o treeOperation.o addfunctions.o   -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o dndfast7 dndfast7.o io.o constants.o mtxutl.o mltaln9.o tddis.o defs.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o dndblast dndblast.o io.o constants.o mtxutl.o mltaln9.o tddis.o defs.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o sextet5 io.o constants.o mtxutl.o mltaln9.o tddis.o sextet5.o defs.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o mafft-distance io.o constants.o mtxutl.o mltaln9.o tddis.o mafft-distance.o defs.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o pairlocalalign mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o MSalignmm.o Galign11.o Lalign11.o genalign11.o MSalign11.o suboptalign11.o SAalignmm.o pairlocalalignmain.o pairlocalalign.o defs.o fft.o fftFunctions.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o multi2hat3s mtxutl.o io.o mltaln9.o tddis.o constants.o multi2hat3s.o defs.o fft.o fftFunctions.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o pairash mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o MSalignmm.o Galign11.o Lalign11.o genalign11.o MSalign11.o suboptalign11.o SAalignmm.o pairash.o defs.o fft.o fftFunctions.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o addsingle mtxutl.o io.o mltaln9.o tddis.o constants.o MSalignmm.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o addsingle.o defs.o fft.o fftFunctions.o addfunctions.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o splittbfast mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o  Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o splittbfast.o defs.o fft.o fftFunctions.o   -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o disttbfast mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o disttbfast.o defs.o fft.o fftFunctions.o addfunctions.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o tbfast mtxutl.o io.o mltaln9.o tddis.o constants.o MSalignmm.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o tbfast.o defs.o fft.o fftFunctions.o addfunctions.o pairlocalalign.o MSalign11.o   -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o nodepair mtxutl.o io.o mltaln9.o tddis.o constants.o MSalignmm.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o nodepair.o defs.o fft.o fftFunctions.o addfunctions.o pairlocalalign.o MSalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o mafft-profile io.o mtxutl.o mltaln9.o tddis.o constants.o partSalignmm.o MSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o SAalignmm.o Galign11.o Lalign11.o genalign11.o Falign.o Falign_localhom.o fftFunctions.o fft.o mafft-profile.o defs.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o mccaskillwrap mtxutl.o io.o mccaskillwrap.o constants.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o contrafoldwrap mtxutl.o io.o contrafoldwrap.o constants.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o regtable2seq mtxutl.o io.o regtable2seq.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o score io.o mtxutl.o mltaln9.o score.o constants.o defs.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o getlag mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o Dalignmm.o getlag.o defs.o fft.o fftFunctions.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o dndpre dndpre.o io.o constants.o mtxutl.o mltaln9.o defs.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o setcore mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o setcore.o defs.o fft.o fftFunctions.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o replaceu mtxutl.o io.o replaceu.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o restoreu mtxutl.o io.o restoreu.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o setdirection mtxutl.o io.o setdirection.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
arm-linux-gnueabihf-gcc -o makedirectionlist mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o  Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o makedirectionlist.o defs.o fft.o fftFunctions.o addfunctions.o  -Denablemultithread  -std=c99 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm  -lpthread
cp mafft mafft-homologs.rb mafft-sparsecore.rb ../scripts
chmod 755 ../scripts/*
cp mafftash_premafft.pl seekquencer_premafft.pl dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore replaceu restoreu setdirection makedirectionlist version  ../binaries
chmod 755 ../binaries/*
cp mafft.1 mafft-homologs.1 ../binaries
done.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/core'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_test -a -O--sourcedirectory=core
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch --sourcedirectory=core
   dh_testroot -a -O--sourcedirectory=core
   dh_prep -a -O--sourcedirectory=core
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -- PREFIX=/usr/lib/mafft MANDIR=/usr/share/man/man1 LIBDIR=/usr/lib/mafft/lib/mafft
	cd core && make -j16 install DESTDIR=/<<PKGBUILDDIR>>/debian/mafft AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=/usr/lib/mafft MANDIR=/usr/share/man/man1 LIBDIR=/usr/lib/mafft/lib/mafft
make[2]: Entering directory '/<<PKGBUILDDIR>>/core'
cp mafft mafft-homologs.rb mafft-sparsecore.rb ../scripts
chmod 755 ../scripts/*
cp mafftash_premafft.pl seekquencer_premafft.pl dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore replaceu restoreu setdirection makedirectionlist version  ../binaries
chmod 755 ../binaries/*
cp mafft.1 mafft-homologs.1 ../binaries
done.
mkdir -p /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/lib/mafft
chmod 755 /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/lib/mafft
mkdir -p /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/bin
chmod 755 /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/bin
chmod 755 mafft mafft-homologs.rb mafft-sparsecore.rb
install --strip-program=true mafft mafft-homologs.rb mafft-sparsecore.rb  /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/bin
install: WARNING: ignoring --strip-program option as -s option was not specified
chmod 755 dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore replaceu restoreu setdirection makedirectionlist version  ||:     # in MinGW, it's ok if this fails
install --strip-program=true -s dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore replaceu restoreu setdirection makedirectionlist version  /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/lib/mafft
install --strip-program=true mafftash_premafft.pl seekquencer_premafft.pl /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/lib/mafft
install: WARNING: ignoring --strip-program option as -s option was not specified
install --strip-program=true -m 644 mafft.1 mafft-homologs.1 /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/lib/mafft
install: WARNING: ignoring --strip-program option as -s option was not specified
( cd /<<PKGBUILDDIR>>/debian/mafft/usr/lib/mafft/bin; \
rm -f linsi ginsi einsi fftns fftnsi nwns nwnsi xinsi qinsi; \
rm -f mafft-linsi mafft-ginsi mafft-einsi mafft-fftns mafft-fftnsi mafft-nwns mafft-nwnsi mafft-xinsi mafft-qinsi mafft-randomcore.rb ; \
ln -s mafft linsi; ln -s mafft ginsi; ln -s mafft fftns; \
ln -s mafft fftnsi; ln -s mafft nwns; ln -s mafft nwnsi; \
ln -s mafft einsi; \
ln -s mafft mafft-linsi; ln -s mafft mafft-ginsi; ln -s mafft mafft-fftns; \
ln -s mafft mafft-fftnsi; ln -s mafft mafft-nwns; ln -s mafft mafft-nwnsi; \
ln -s mafft mafft-einsi; ln -s mafft mafft-xinsi; ln -s mafft mafft-qinsi;\
rm -f mafft-profile mafft-profile.exe; ln -s /usr/lib/mafft/lib/mafft/mafft-profile .; \
rm -f mafft-distance mafft-distance.exe; ln -s /usr/lib/mafft/lib/mafft/mafft-distance . )
mkdir -p /<<PKGBUILDDIR>>/debian/mafft/usr/share/man/man1
chmod 755 /<<PKGBUILDDIR>>/debian/mafft/usr/share/man/man1
install --strip-program=true -m 644 mafft.1 mafft-homologs.1 /<<PKGBUILDDIR>>/debian/mafft/usr/share/man/man1
install: WARNING: ignoring --strip-program option as -s option was not specified
make[2]: Leaving directory '/<<PKGBUILDDIR>>/core'
rm debian/mafft/usr/lib/mafft/lib/mafft/*.1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--sourcedirectory=core
   dh_installchangelogs -a -O--sourcedirectory=core
   dh_installman -a -O--sourcedirectory=core
   dh_installinit -a -O--sourcedirectory=core
   dh_installsystemduser -a -O--sourcedirectory=core
   dh_perl -a -O--sourcedirectory=core
   dh_link -a -O--sourcedirectory=core
   dh_strip_nondeterminism -a -O--sourcedirectory=core
   debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress -X test/sample
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_fixperms -a -O--sourcedirectory=core
   dh_missing -a -O--sourcedirectory=core
   dh_dwz -a -O--sourcedirectory=core
   dh_strip -a -O--sourcedirectory=core
   dh_makeshlibs -a -O--sourcedirectory=core
   dh_shlibdeps -a -O--sourcedirectory=core
   dh_installdeb -a -O--sourcedirectory=core
   dh_gencontrol -a -O--sourcedirectory=core
   dh_md5sums -a -O--sourcedirectory=core
   dh_builddeb -a -O--sourcedirectory=core
dpkg-deb: building package 'mafft' in '../mafft_7.429-1_armhf.deb'.
dpkg-deb: building package 'mafft-dbgsym' in '../mafft-dbgsym_7.429-1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any >../mafft_7.429-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-08-03T12:09:31Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


mafft_7.429-1_armhf.changes:
----------------------------

Format: 1.8
Date: Sat, 27 Jul 2019 12:56:27 +0200
Source: mafft
Binary: mafft mafft-dbgsym
Built-For-Profiles: cross nocheck
Architecture: armhf
Version: 7.429-1
Distribution: unstable-amd64-sbuild
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Steffen Moeller <moeller@debian.org>
Description:
 mafft      - Multiple alignment program for amino acid or nucleotide sequences
Changes:
 mafft (7.429-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version
   * debhelper-compat 12
   * Created with routine-update script.
   * Standards-Version: 4.4.0
Checksums-Sha1:
 d2050337244306770a7ee9d666b05412ae4751bb 8646836 mafft-dbgsym_7.429-1_armhf.deb
 c99ff7e4bd6a95598d7dd22f1b39b345d1ccac74 4594 mafft_7.429-1_armhf.buildinfo
 54b3a28fc457cb292d7f4c56956809cd82323cc6 723012 mafft_7.429-1_armhf.deb
Checksums-Sha256:
 ffbd345d9d7a878ba1b997c34866e083daedc5a216b6fb38ddcfdad20aee32b7 8646836 mafft-dbgsym_7.429-1_armhf.deb
 128c84e92d9d0dd0f535bb3d48f90d13abb24072bf995973b0b2928b91b33487 4594 mafft_7.429-1_armhf.buildinfo
 aee0700948a63d5d6efa01bc68cb97c3bea018bfbd62fab6f253129ce2dfff7e 723012 mafft_7.429-1_armhf.deb
Files:
 38e32e9334ce4a3cc1362c95b7fc7c7b 8646836 debug optional mafft-dbgsym_7.429-1_armhf.deb
 136508f6a608f5e56c320a8294520c44 4594 science optional mafft_7.429-1_armhf.buildinfo
 3cdd65ed6640a64791675ca973f4efa1 723012 science optional mafft_7.429-1_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: mafft
Binary: mafft
Architecture: armhf
Version: 7.429-1
Checksums-Md5:
 38e32e9334ce4a3cc1362c95b7fc7c7b 8646836 mafft-dbgsym_7.429-1_armhf.deb
 3cdd65ed6640a64791675ca973f4efa1 723012 mafft_7.429-1_armhf.deb
Checksums-Sha1:
 d2050337244306770a7ee9d666b05412ae4751bb 8646836 mafft-dbgsym_7.429-1_armhf.deb
 54b3a28fc457cb292d7f4c56956809cd82323cc6 723012 mafft_7.429-1_armhf.deb
Checksums-Sha256:
 ffbd345d9d7a878ba1b997c34866e083daedc5a216b6fb38ddcfdad20aee32b7 8646836 mafft-dbgsym_7.429-1_armhf.deb
 aee0700948a63d5d6efa01bc68cb97c3bea018bfbd62fab6f253129ce2dfff7e 723012 mafft_7.429-1_armhf.deb
Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Sat, 03 Aug 2019 12:09:30 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
 autoconf (= 2.69-11),
 automake (= 1:1.16.1-4),
 autopoint (= 0.19.8.1-9),
 autotools-dev (= 20180224.1),
 base-files (= 11),
 base-passwd (= 3.5.46),
 bash (= 5.0-4),
 binutils (= 2.32.51.20190727-1),
 binutils-common (= 2.32.51.20190727-1),
 binutils-x86-64-linux-gnu (= 2.32.51.20190727-1),
 bsdmainutils (= 11.1.2+b1),
 bsdutils (= 1:2.34-0.1),
 build-essential (= 12.6),
 bzip2 (= 1.0.6-9.2),
 coreutils (= 8.30-3),
 cpp (= 4:8.3.0-1),
 cpp-8 (= 8.3.0-19),
 dash (= 0.5.10.2-6),
 debconf (= 1.5.72),
 debhelper (= 12.2.3),
 debianutils (= 4.8.6.3),
 dh-autoreconf (= 19),
 dh-strip-nondeterminism (= 1.4.0-1),
 diffutils (= 1:3.7-3),
 dpkg (= 1.19.7),
 dpkg-dev (= 1.19.7),
 dwz (= 0.12.20190723-1),
 fdisk (= 2.34-0.1),
 file (= 1:5.37-5),
 findutils (= 4.6.0+git+20190510-2),
 g++ (= 4:8.3.0-1),
 g++-8 (= 8.3.0-19),
 gcc (= 4:8.3.0-1),
 gcc-8 (= 8.3.0-19),
 gcc-8-base (= 8.3.0-19),
 gcc-9-base (= 9.1.0-10),
 gettext (= 0.19.8.1-9),
 gettext-base (= 0.19.8.1-9),
 grep (= 3.3-1),
 groff-base (= 1.22.4-3),
 gzip (= 1.9-3),
 hostname (= 3.21),
 init-system-helpers (= 1.57),
 intltool-debian (= 0.35.0+20060710.5),
 libacl1 (= 2.2.53-4),
 libarchive-zip-perl (= 1.64-1),
 libasan5 (= 9.1.0-10),
 libatomic1 (= 9.1.0-10),
 libattr1 (= 1:2.4.48-4),
 libaudit-common (= 1:2.8.5-2),
 libaudit1 (= 1:2.8.5-2),
 libbinutils (= 2.32.51.20190727-1),
 libblkid1 (= 2.34-0.1),
 libbsd0 (= 0.9.1-2),
 libbz2-1.0 (= 1.0.6-9.2),
 libc-bin (= 2.28-10),
 libc-dev-bin (= 2.28-10),
 libc6 (= 2.28-10),
 libc6-dev (= 2.28-10),
 libcap-ng0 (= 0.7.9-2),
 libcc1-0 (= 9.1.0-10),
 libcroco3 (= 0.6.12-3),
 libdb5.3 (= 5.3.28+dfsg1-0.6),
 libdebconfclient0 (= 0.249),
 libdpkg-perl (= 1.19.7),
 libelf1 (= 0.176-1.1),
 libfdisk1 (= 2.34-0.1),
 libffi6 (= 3.2.1-9),
 libfile-stripnondeterminism-perl (= 1.4.0-1),
 libgcc-8-dev (= 8.3.0-19),
 libgcc1 (= 1:9.1.0-10),
 libgcrypt20 (= 1.8.4-5),
 libgdbm-compat4 (= 1.18.1-4+b1),
 libgdbm6 (= 1.18.1-4+b1),
 libglib2.0-0 (= 2.60.6-1),
 libgmp10 (= 2:6.1.2+dfsg-4),
 libgomp1 (= 9.1.0-10),
 libgpg-error0 (= 1.36-7),
 libicu63 (= 63.2-2),
 libisl19 (= 0.20-2),
 libitm1 (= 9.1.0-10),
 liblsan0 (= 9.1.0-10),
 liblz4-1 (= 1.8.3-1),
 liblzma5 (= 5.2.4-1),
 libmagic-mgc (= 1:5.37-5),
 libmagic1 (= 1:5.37-5),
 libmount1 (= 2.34-0.1),
 libmpc3 (= 1.1.0-1),
 libmpfr6 (= 4.0.2-1),
 libmpx2 (= 8.3.0-19),
 libncurses6 (= 6.1+20190713-2),
 libncursesw6 (= 6.1+20190713-2),
 libpam-modules (= 1.3.1-5),
 libpam-modules-bin (= 1.3.1-5),
 libpam-runtime (= 1.3.1-5),
 libpam0g (= 1.3.1-5),
 libpcre2-8-0 (= 10.32-5),
 libpcre3 (= 2:8.39-12),
 libperl5.28 (= 5.28.1-6),
 libpipeline1 (= 1.5.1-2),
 libquadmath0 (= 9.1.0-10),
 libseccomp2 (= 2.4.1-2),
 libselinux1 (= 2.9-2),
 libsigsegv2 (= 2.12-2),
 libsmartcols1 (= 2.34-0.1),
 libstdc++-8-dev (= 8.3.0-19),
 libstdc++6 (= 9.1.0-10),
 libsub-override-perl (= 0.09-2),
 libsystemd0 (= 241-7),
 libtinfo6 (= 6.1+20190713-2),
 libtool (= 2.4.6-10),
 libtsan0 (= 9.1.0-10),
 libubsan1 (= 9.1.0-10),
 libuchardet0 (= 0.0.6-3),
 libudev1 (= 241-7),
 libunistring2 (= 0.9.10-2),
 libuuid1 (= 2.34-0.1),
 libxml2 (= 2.9.4+dfsg1-7+b3),
 linux-libc-dev (= 4.19.37-6),
 login (= 1:4.7-2),
 m4 (= 1.4.18-2),
 make (= 4.2.1-1.2),
 man-db (= 2.8.5-2),
 mawk (= 1.3.3-17+b3),
 ncurses-base (= 6.1+20190713-2),
 ncurses-bin (= 6.1+20190713-2),
 patch (= 2.7.6-6),
 perl (= 5.28.1-6),
 perl-base (= 5.28.1-6),
 perl-modules-5.28 (= 5.28.1-6),
 po-debconf (= 1.0.21),
 sed (= 4.7-1),
 sensible-utils (= 0.0.12),
 sysvinit-utils (= 2.95-4),
 tar (= 1.30+dfsg-6),
 util-linux (= 2.34-0.1),
 xz-utils (= 5.2.4-1),
 zlib1g (= 1:1.2.11.dfsg-1)
Environment:
 DEB_BUILD_OPTIONS="nocheck parallel=16"
 DEB_BUILD_PROFILES="cross nocheck"
 LANG="en_US.UTF-8"
 LC_ALL="C.UTF-8"
 LD_LIBRARY_PATH="/usr/lib/libeatmydata"
 MAKEFLAGS=" -j16"
 SOURCE_DATE_EPOCH="1564224987"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


mafft-dbgsym_7.429-1_armhf.deb
------------------------------

 new Debian package, version 2.0.
 size 8646836 bytes: control archive=1996 bytes.
    1594 bytes,    12 lines      control              
    3371 bytes,    32 lines      md5sums              
 Package: mafft-dbgsym
 Source: mafft
 Version: 7.429-1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 10932
 Depends: mafft (= 7.429-1)
 Section: debug
 Priority: optional
 Description: debug symbols for mafft
 Build-Ids: 04690274a01f5fd633bbf91d931e0022191925b6 0ed41058c0ea4f4a06d083046105391aa378d1c1 0f47623a9c7302f219db63117fb929ea6a598250 1d2d3589aac6008a5b1c4047326fed7c5b91e5a7 1ee599f982c8dc8314c09e493c2c2c1e4c8e58d4 22c263c9ebcc02712f0bfb7bce36cc01df0ee1eb 2755a0784939ff606f211aa4b23ec5424d107928 2ec33e4f3342b819a25695ffc176832331ae97d1 4cb3d669df665ec5e9409d8fafe365b53b118ae7 533da53dbe6f590ce4cd37e223f46f8ca0ffe2f3 53566dd05d56a44c53233ff68fb9a98af55e19d4 54fb2ea1d90db9408bd0394803b61cbbfbc4868e 592739bfdcacea261891bc73a631f6440d28226d 5cba36c1b36e7462b08c4d463298e716b766ab22 639444347aff24d64fd85a4f816abc80998c8bba 6bbbc4d960b711b0ba45823af180d6296cfef29c 6dd8d558f211007e8e4dbf227ed93aa3da733bf6 771767772d9eb601b4b6c04fc84691b5d3c12208 77f443849548a1167cb54e54912d6d37d3b45feb 8024da990500b41794efa8a26800a12633df9ad0 84ff82f0fdcc770f06cc46327ed2f0a0f8824833 8a65afebea72d7e29315fcc4893e594b83b7dad8 9370ce058d6e25088193e418a4300b379579296c 94aca8a6f1decea627996372032b1944fe854dc6 c53820df90fbdacf912ec463acbb8bd90792ebc6 c6dc0d9ed028ff67d1971d3489f3a088993e2dc4 e392ee9c109756e00dbce836fa544dd3a8cb0848 f03455c7cdef678780c8e534fe10e701098da840 f3dbd5957379e6e49886b130baead707925460d1 f754138b287b8b7e05517f550f29e328071928dd fa3fd92b067fb8c997aaa67a25a370a384f1712b

drwxr-xr-x root/root         0 2019-07-27 10:56 ./
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/04/
-rw-r--r-- root/root    560876 2019-07-27 10:56 ./usr/lib/debug/.build-id/04/690274a01f5fd633bbf91d931e0022191925b6.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/0e/
-rw-r--r-- root/root    544024 2019-07-27 10:56 ./usr/lib/debug/.build-id/0e/d41058c0ea4f4a06d083046105391aa378d1c1.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/0f/
-rw-r--r-- root/root    286200 2019-07-27 10:56 ./usr/lib/debug/.build-id/0f/47623a9c7302f219db63117fb929ea6a598250.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/1d/
-rw-r--r-- root/root    328952 2019-07-27 10:56 ./usr/lib/debug/.build-id/1d/2d3589aac6008a5b1c4047326fed7c5b91e5a7.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/1e/
-rw-r--r-- root/root    288284 2019-07-27 10:56 ./usr/lib/debug/.build-id/1e/e599f982c8dc8314c09e493c2c2c1e4c8e58d4.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/22/
-rw-r--r-- root/root    543240 2019-07-27 10:56 ./usr/lib/debug/.build-id/22/c263c9ebcc02712f0bfb7bce36cc01df0ee1eb.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/27/
-rw-r--r-- root/root    142080 2019-07-27 10:56 ./usr/lib/debug/.build-id/27/55a0784939ff606f211aa4b23ec5424d107928.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/2e/
-rw-r--r-- root/root    516896 2019-07-27 10:56 ./usr/lib/debug/.build-id/2e/c33e4f3342b819a25695ffc176832331ae97d1.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/4c/
-rw-r--r-- root/root      8240 2019-07-27 10:56 ./usr/lib/debug/.build-id/4c/b3d669df665ec5e9409d8fafe365b53b118ae7.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/53/
-rw-r--r-- root/root      5868 2019-07-27 10:56 ./usr/lib/debug/.build-id/53/3da53dbe6f590ce4cd37e223f46f8ca0ffe2f3.debug
-rw-r--r-- root/root    310992 2019-07-27 10:56 ./usr/lib/debug/.build-id/53/566dd05d56a44c53233ff68fb9a98af55e19d4.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/54/
-rw-r--r-- root/root    308448 2019-07-27 10:56 ./usr/lib/debug/.build-id/54/fb2ea1d90db9408bd0394803b61cbbfbc4868e.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/59/
-rw-r--r-- root/root    583340 2019-07-27 10:56 ./usr/lib/debug/.build-id/59/2739bfdcacea261891bc73a631f6440d28226d.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/5c/
-rw-r--r-- root/root    115984 2019-07-27 10:56 ./usr/lib/debug/.build-id/5c/ba36c1b36e7462b08c4d463298e716b766ab22.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/63/
-rw-r--r-- root/root    584808 2019-07-27 10:56 ./usr/lib/debug/.build-id/63/9444347aff24d64fd85a4f816abc80998c8bba.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/6b/
-rw-r--r-- root/root    514704 2019-07-27 10:56 ./usr/lib/debug/.build-id/6b/bbc4d960b711b0ba45823af180d6296cfef29c.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/6d/
-rw-r--r-- root/root    621936 2019-07-27 10:56 ./usr/lib/debug/.build-id/6d/d8d558f211007e8e4dbf227ed93aa3da733bf6.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/77/
-rw-r--r-- root/root    115636 2019-07-27 10:56 ./usr/lib/debug/.build-id/77/1767772d9eb601b4b6c04fc84691b5d3c12208.debug
-rw-r--r-- root/root      7964 2019-07-27 10:56 ./usr/lib/debug/.build-id/77/f443849548a1167cb54e54912d6d37d3b45feb.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/80/
-rw-r--r-- root/root    514412 2019-07-27 10:56 ./usr/lib/debug/.build-id/80/24da990500b41794efa8a26800a12633df9ad0.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/84/
-rw-r--r-- root/root    538040 2019-07-27 10:56 ./usr/lib/debug/.build-id/84/ff82f0fdcc770f06cc46327ed2f0a0f8824833.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/8a/
-rw-r--r-- root/root    328540 2019-07-27 10:56 ./usr/lib/debug/.build-id/8a/65afebea72d7e29315fcc4893e594b83b7dad8.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/93/
-rw-r--r-- root/root    311448 2019-07-27 10:56 ./usr/lib/debug/.build-id/93/70ce058d6e25088193e418a4300b379579296c.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/94/
-rw-r--r-- root/root    340540 2019-07-27 10:56 ./usr/lib/debug/.build-id/94/aca8a6f1decea627996372032b1944fe854dc6.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/c5/
-rw-r--r-- root/root    287372 2019-07-27 10:56 ./usr/lib/debug/.build-id/c5/3820df90fbdacf912ec463acbb8bd90792ebc6.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/c6/
-rw-r--r-- root/root    327992 2019-07-27 10:56 ./usr/lib/debug/.build-id/c6/dc0d9ed028ff67d1971d3489f3a088993e2dc4.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/e3/
-rw-r--r-- root/root    327548 2019-07-27 10:56 ./usr/lib/debug/.build-id/e3/92ee9c109756e00dbce836fa544dd3a8cb0848.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/f0/
-rw-r--r-- root/root    288224 2019-07-27 10:56 ./usr/lib/debug/.build-id/f0/3455c7cdef678780c8e534fe10e701098da840.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/f3/
-rw-r--r-- root/root    572668 2019-07-27 10:56 ./usr/lib/debug/.build-id/f3/dbd5957379e6e49886b130baead707925460d1.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/f7/
-rw-r--r-- root/root    571220 2019-07-27 10:56 ./usr/lib/debug/.build-id/f7/54138b287b8b7e05517f550f29e328071928dd.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.build-id/fa/
-rw-r--r-- root/root    313828 2019-07-27 10:56 ./usr/lib/debug/.build-id/fa/3fd92b067fb8c997aaa67a25a370a384f1712b.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root     26648 2019-07-27 10:56 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/mafft.debug
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/doc/mafft-dbgsym -> mafft


mafft_7.429-1_armhf.deb
-----------------------

 new Debian package, version 2.0.
 size 723012 bytes: control archive=2340 bytes.
    1384 bytes,    30 lines      control              
    3783 bytes,    54 lines      md5sums              
 Package: mafft
 Version: 7.429-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 7165
 Depends: libc6 (>= 2.7), perl:any
 Recommends: blast2, libwww-perl, lynx, ruby
 Enhances: t-coffee
 Section: science
 Priority: optional
 Homepage: http://mafft.cbrc.jp/alignment/software/
 Description: Multiple alignment program for amino acid or nucleotide sequences
  MAFFT is a multiple sequence alignment program which offers three
  accuracy-oriented methods:
   * L-INS-i (probably most accurate; recommended for <200 sequences;
     iterative refinement method incorporating local pairwise alignment
     information),
   * G-INS-i (suitable for sequences of similar lengths; recommended for
     <200 sequences; iterative refinement method incorporating global
     pairwise alignment information),
   * E-INS-i (suitable for sequences containing large unalignable regions;
     recommended for <200 sequences),
  and five speed-oriented methods:
   * FFT-NS-i (iterative refinement method; two cycles only),
   * FFT-NS-i (iterative refinement method; max. 1000 iterations),
   * FFT-NS-2 (fast; progressive method),
   * FFT-NS-1 (very fast; recommended for >2000 sequences; progressive
     method with a rough guide tree),
   * NW-NS-PartTree-1 (recommended for ∼50,000 sequences; progressive
     method with the PartTree algorithm).

drwxr-xr-x root/root         0 2019-07-27 10:56 ./
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/bin/
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/bin/mafft -> ../lib/mafft/bin/mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/bin/mafft-homologs -> ../lib/mafft/bin/mafft-homologs.rb
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/bin/mafft-profile -> ../lib/mafft/bin/mafft-profile
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/mafft/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/einsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/fftns -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/fftnsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/ginsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/linsi -> mafft
-rwxr-xr-x root/root    104699 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-distance -> ../lib/mafft/mafft-distance
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-einsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-fftns -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-fftnsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-ginsi -> mafft
-rwxr-xr-x root/root     11551 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-homologs.rb
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-linsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-nwns -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-nwnsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-profile -> ../lib/mafft/mafft-profile
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-qinsi -> mafft
-rwxr-xr-x root/root      7788 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-sparsecore.rb
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/mafft-xinsi -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/nwns -> mafft
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/lib/mafft/bin/nwnsi -> mafft
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/mafft/lib/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/
-rwxr-xr-x root/root    349748 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/addsingle
-rwxr-xr-x root/root    198196 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/contrafoldwrap
-rwxr-xr-x root/root     55004 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/countlen
-rwxr-xr-x root/root    357940 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/disttbfast
-rwxr-xr-x root/root    206388 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/dndblast
-rwxr-xr-x root/root    206388 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/dndfast7
-rwxr-xr-x root/root    198204 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/dndpre
-rwxr-xr-x root/root    362036 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/dvtditr
-rwxr-xr-x root/root    103988 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/f2cl
-rwxr-xr-x root/root    321076 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/getlag
-rwxr-xr-x root/root      5672 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/hex2maffttext
-rwxr-xr-x root/root    206388 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/mafft-distance
-rwxr-xr-x root/root    321076 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/mafft-profile
-rwxr-xr-x root/root     10475 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/mafftash_premafft.pl
-rwxr-xr-x root/root      5672 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/maffttext2hex
-rwxr-xr-x root/root    333380 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/makedirectionlist
-rwxr-xr-x root/root    202292 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/mccaskillwrap
-rwxr-xr-x root/root    214580 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/multi2hat3s
-rwxr-xr-x root/root    357940 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/nodepair
-rwxr-xr-x root/root    329268 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/pairash
-rwxr-xr-x root/root    345652 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/pairlocalalign
-rwxr-xr-x root/root    153308 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/regtable2seq
-rwxr-xr-x root/root    149212 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/replaceu
-rwxr-xr-x root/root    153308 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/restoreu
-rwxr-xr-x root/root    198196 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/score
-rwxr-xr-x root/root     15541 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/seekquencer_premafft.pl
-rwxr-xr-x root/root     55004 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/seq2regtable
-rwxr-xr-x root/root    321076 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/setcore
-rwxr-xr-x root/root    153316 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/setdirection
-rwxr-xr-x root/root    206388 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/sextet5
-rwxr-xr-x root/root    337460 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/splittbfast
-rwxr-xr-x root/root    386612 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/tbfast
-rwxr-xr-x root/root      5672 2019-07-27 10:56 ./usr/lib/mafft/lib/mafft/version
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/doc/mafft/
-rw-r--r-- root/root      3634 2019-07-27 10:56 ./usr/share/doc/mafft/changelog.Debian.gz
-rw-r--r-- root/root      1931 2019-07-27 10:56 ./usr/share/doc/mafft/copyright
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/doc/mafft/test/
-rw-r--r-- root/root     16616 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample
-rw-r--r-- root/root     30112 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.dpparttree
-rw-r--r-- root/root     28816 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.fftns2
-rw-r--r-- root/root     28996 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.fftnsi
-rw-r--r-- root/root     29896 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.gins1
-rw-r--r-- root/root     29572 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.ginsi
-rw-r--r-- root/root     41380 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.ginsi.allowshift
-rw-r--r-- root/root     28888 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.lins1
-rw-r--r-- root/root     29500 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.linsi
-rw-r--r-- root/root     30112 2019-07-01 06:59 ./usr/share/doc/mafft/test/sample.parttree
-rw-r--r-- root/root      1502 2019-07-01 06:59 ./usr/share/doc/mafft/test/samplerna
-rw-r--r-- root/root      1916 2019-07-01 06:59 ./usr/share/doc/mafft/test/samplerna.qinsi
-rw-r--r-- root/root      1916 2019-07-01 06:59 ./usr/share/doc/mafft/test/samplerna.xinsi
-rw-r--r-- root/root       725 2019-07-01 06:59 ./usr/share/doc/mafft/test/script
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/man/
drwxr-xr-x root/root         0 2019-07-27 10:56 ./usr/share/man/man1/
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/einsi.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/fftns.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/fftnsi.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/ginsi.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/linsi.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/mafft-einsi.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/mafft-fftns.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/mafft-fftnsi.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/mafft-ginsi.1.gz -> mafft.1.gz
-rw-r--r-- root/root      2130 2019-07-27 10:56 ./usr/share/man/man1/mafft-homologs.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/mafft-linsi.1.gz -> mafft.1.gz
lrwxrwxrwx root/root         0 2019-07-27 10:56 ./usr/share/man/man1/mafft-profile.1.gz -> mafft.1.gz
-rw-r--r-- root/root      4421 2019-07-27 10:56 ./usr/share/man/man1/mafft.1.gz


lintian
-------


Setup apt archive
-----------------

Merged Build-Depends: lintian:amd64
Filtered Build-Depends: lintian:amd64
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [963 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [528 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [614 B]
Fetched 2105 B in 0s (145 kB/s)
Reading package lists...
Reading package lists...

Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  diffstat libapt-pkg-perl libb-hooks-op-check-perl libcapture-tiny-perl
  libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl
  libclone-perl libdevel-callchecker-perl libdevel-globaldestruction-perl
  libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl
  libexporter-tiny-perl libfile-basedir-perl libfuture-perl
  libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-perl
  libio-pty-perl libio-socket-ssl-perl libipc-run-perl
  libipc-system-simple-perl liblist-compare-perl liblist-moreutils-perl
  libmailtools-perl libmodule-runtime-perl libmoo-perl libnet-dns-perl
  libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl
  libnet-ssleay-perl libparams-classify-perl libparse-debianchangelog-perl
  libpath-tiny-perl librole-tiny-perl libssl1.1 libstrictures-perl
  libstruct-dumb-perl libsub-exporter-progressive-perl libsub-name-perl
  libsub-quote-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl
  libtype-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian
  netbase patchutils perl-openssl-defaults t1utils
Suggested packages:
  libdata-dump-perl ca-certificates libscalar-number-perl
  libhtml-template-perl libbareword-filehandles-perl libindirect-perl
  libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl
  libwww-perl binutils-multiarch libtext-template-perl
Recommended packages:
  libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl
  libsereal-perl libtest-fatal-perl libtest-refcount-perl
  libclass-xsaccessor-perl libdigest-bubblebabble-perl libnet-dns-sec-perl
  libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libref-util-perl
  libtype-tiny-xs-perl libperlio-gzip-perl
The following NEW packages will be installed:
  diffstat libapt-pkg-perl libb-hooks-op-check-perl libcapture-tiny-perl
  libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl
  libclone-perl libdevel-callchecker-perl libdevel-globaldestruction-perl
  libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl
  libexporter-tiny-perl libfile-basedir-perl libfuture-perl
  libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-perl
  libio-pty-perl libio-socket-ssl-perl libipc-run-perl
  libipc-system-simple-perl liblist-compare-perl liblist-moreutils-perl
  libmailtools-perl libmodule-runtime-perl libmoo-perl libnet-dns-perl
  libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl
  libnet-ssleay-perl libparams-classify-perl libparse-debianchangelog-perl
  libpath-tiny-perl librole-tiny-perl libssl1.1 libstrictures-perl
  libstruct-dumb-perl libsub-exporter-progressive-perl libsub-name-perl
  libsub-quote-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl
  libtype-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian
  netbase patchutils perl-openssl-defaults
  sbuild-build-depends-lintian-dummy:armhf t1utils
0 upgraded, 57 newly installed, 0 to remove and 0 not upgraded.
Need to get 4234 kB/6102 kB of archives.
After this operation, 18.4 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B]
Get:2 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b1 [71.2 kB]
Get:3 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b1 [11.4 kB]
Get:4 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB]
Get:5 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libcgi-pm-perl all 4.44-1 [223 kB]
Get:6 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB]
Get:7 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB]
Get:8 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libclass-method-modifiers-perl all 2.12-1 [18.6 kB]
Get:9 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB]
Get:10 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB]
Get:11 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1 [15.7 kB]
Get:12 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B]
Get:13 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libdevel-globaldestruction-perl all 0.14-1 [8084 B]
Get:14 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB]
Get:15 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-1 [320 kB]
Get:16 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.066-1 [210 kB]
Get:17 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B]
Get:18 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB]
Get:19 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB]
Get:20 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-dns-perl all 1.20-1 [367 kB]
Get:21 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB]
Get:22 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB]
Get:23 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB]
Get:24 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB]
Get:25 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB]
Get:26 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libfuture-perl all 0.41-1 [79.0 kB]
Get:27 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b1 [25.5 kB]
Get:28 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get:29 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB]
Get:30 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB]
Get:31 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libio-async-perl all 0.74-1 [268 kB]
Get:32 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB]
Get:33 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB]
Get:34 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB]
Get:35 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB]
Get:36 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 librole-tiny-perl all 2.000006-1 [19.4 kB]
Get:37 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB]
Get:38 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libsub-quote-perl all 2.006003-1 [19.7 kB]
Get:39 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libmoo-perl all 2.003004-2 [57.4 kB]
Get:40 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB]
Get:41 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB]
Get:42 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB]
Get:43 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libtype-tiny-perl all 1.004004-1 [266 kB]
Get:44 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB]
Get:45 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.79+repack-2 [34.0 kB]
Get:46 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB]
Get:47 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB]
Get:48 http://cdn-fastly.deb.debian.org/debian unstable/main amd64 lintian all 2.16.0 [1189 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 4234 kB in 12s (348 kB/s)
Selecting previously unselected package netbase.
(Reading database ... 18232 files and directories currently installed.)
Preparing to unpack .../00-netbase_5.6_all.deb ...
Unpacking netbase (5.6) ...
Selecting previously unselected package diffstat.
Preparing to unpack .../01-diffstat_1.62-1_amd64.deb ...
Unpacking diffstat (1.62-1) ...
Selecting previously unselected package libapt-pkg-perl.
Preparing to unpack .../02-libapt-pkg-perl_0.1.36+b1_amd64.deb ...
Unpacking libapt-pkg-perl (0.1.36+b1) ...
Selecting previously unselected package libb-hooks-op-check-perl.
Preparing to unpack .../03-libb-hooks-op-check-perl_0.22-1+b1_amd64.deb ...
Unpacking libb-hooks-op-check-perl (0.22-1+b1) ...
Selecting previously unselected package libcapture-tiny-perl.
Preparing to unpack .../04-libcapture-tiny-perl_0.48-1_all.deb ...
Unpacking libcapture-tiny-perl (0.48-1) ...
Selecting previously unselected package libhtml-tagset-perl.
Preparing to unpack .../05-libhtml-tagset-perl_3.20-3_all.deb ...
Unpacking libhtml-tagset-perl (3.20-3) ...
Selecting previously unselected package liburi-perl.
Preparing to unpack .../06-liburi-perl_1.76-1_all.deb ...
Unpacking liburi-perl (1.76-1) ...
Selecting previously unselected package libhtml-parser-perl.
Preparing to unpack .../07-libhtml-parser-perl_3.72-3+b3_amd64.deb ...
Unpacking libhtml-parser-perl (3.72-3+b3) ...
Selecting previously unselected package libcgi-pm-perl.
Preparing to unpack .../08-libcgi-pm-perl_4.44-1_all.deb ...
Unpacking libcgi-pm-perl (4.44-1) ...
Selecting previously unselected package libsub-name-perl.
Preparing to unpack .../09-libsub-name-perl_0.21-1+b3_amd64.deb ...
Unpacking libsub-name-perl (0.21-1+b3) ...
Selecting previously unselected package libclass-accessor-perl.
Preparing to unpack .../10-libclass-accessor-perl_0.51-1_all.deb ...
Unpacking libclass-accessor-perl (0.51-1) ...
Selecting previously unselected package libclass-method-modifiers-perl.
Preparing to unpack .../11-libclass-method-modifiers-perl_2.12-1_all.deb ...
Unpacking libclass-method-modifiers-perl (2.12-1) ...
Selecting previously unselected package libclone-perl.
Preparing to unpack .../12-libclone-perl_0.41-1+b1_amd64.deb ...
Unpacking libclone-perl (0.41-1+b1) ...
Selecting previously unselected package libdynaloader-functions-perl.
Preparing to unpack .../13-libdynaloader-functions-perl_0.003-1_all.deb ...
Unpacking libdynaloader-functions-perl (0.003-1) ...
Selecting previously unselected package libdevel-callchecker-perl.
Preparing to unpack .../14-libdevel-callchecker-perl_0.008-1_amd64.deb ...
Unpacking libdevel-callchecker-perl (0.008-1) ...
Selecting previously unselected package libsub-exporter-progressive-perl.
Preparing to unpack .../15-libsub-exporter-progressive-perl_0.001013-1_all.deb ...
Unpacking libsub-exporter-progressive-perl (0.001013-1) ...
Selecting previously unselected package libdevel-globaldestruction-perl.
Preparing to unpack .../16-libdevel-globaldestruction-perl_0.14-1_all.deb ...
Unpacking libdevel-globaldestruction-perl (0.14-1) ...
Selecting previously unselected package libdigest-hmac-perl.
Preparing to unpack .../17-libdigest-hmac-perl_1.03+dfsg-2_all.deb ...
Unpacking libdigest-hmac-perl (1.03+dfsg-2) ...
Selecting previously unselected package libssl1.1:amd64.
Preparing to unpack .../18-libssl1.1_1.1.1c-1_amd64.deb ...
Unpacking libssl1.1:amd64 (1.1.1c-1) ...
Selecting previously unselected package perl-openssl-defaults:amd64.
Preparing to unpack .../19-perl-openssl-defaults_3_amd64.deb ...
Unpacking perl-openssl-defaults:amd64 (3) ...
Selecting previously unselected package libnet-ssleay-perl.
Preparing to unpack .../20-libnet-ssleay-perl_1.88-1_amd64.deb ...
Unpacking libnet-ssleay-perl (1.88-1) ...
Selecting previously unselected package libio-socket-ssl-perl.
Preparing to unpack .../21-libio-socket-ssl-perl_2.066-1_all.deb ...
Unpacking libio-socket-ssl-perl (2.066-1) ...
Selecting previously unselected package libnet-smtp-ssl-perl.
Preparing to unpack .../22-libnet-smtp-ssl-perl_1.04-1_all.deb ...
Unpacking libnet-smtp-ssl-perl (1.04-1) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../23-libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
Selecting previously unselected package libmailtools-perl.
Preparing to unpack .../24-libmailtools-perl_2.21-1_all.deb ...
Unpacking libmailtools-perl (2.21-1) ...
Selecting previously unselected package libnet-ip-perl.
Preparing to unpack .../25-libnet-ip-perl_1.26-2_all.deb ...
Unpacking libnet-ip-perl (1.26-2) ...
Selecting previously unselected package libnet-dns-perl.
Preparing to unpack .../26-libnet-dns-perl_1.20-1_all.deb ...
Unpacking libnet-dns-perl (1.20-1) ...
Selecting previously unselected package libnet-domain-tld-perl.
Preparing to unpack .../27-libnet-domain-tld-perl_1.75-1_all.deb ...
Unpacking libnet-domain-tld-perl (1.75-1) ...
Selecting previously unselected package libemail-valid-perl.
Preparing to unpack .../28-libemail-valid-perl_1.202-1_all.deb ...
Unpacking libemail-valid-perl (1.202-1) ...
Selecting previously unselected package libexporter-tiny-perl.
Preparing to unpack .../29-libexporter-tiny-perl_1.002001-1_all.deb ...
Unpacking libexporter-tiny-perl (1.002001-1) ...
Selecting previously unselected package libipc-system-simple-perl.
Preparing to unpack .../30-libipc-system-simple-perl_1.25-4_all.deb ...
Unpacking libipc-system-simple-perl (1.25-4) ...
Selecting previously unselected package libfile-basedir-perl.
Preparing to unpack .../31-libfile-basedir-perl_0.08-1_all.deb ...
Unpacking libfile-basedir-perl (0.08-1) ...
Selecting previously unselected package libfuture-perl.
Preparing to unpack .../32-libfuture-perl_0.41-1_all.deb ...
Unpacking libfuture-perl (0.41-1) ...
Selecting previously unselected package libparams-classify-perl.
Preparing to unpack .../33-libparams-classify-perl_0.015-1+b1_amd64.deb ...
Unpacking libparams-classify-perl (0.015-1+b1) ...
Selecting previously unselected package libmodule-runtime-perl.
Preparing to unpack .../34-libmodule-runtime-perl_0.016-1_all.deb ...
Unpacking libmodule-runtime-perl (0.016-1) ...
Selecting previously unselected package libimport-into-perl.
Preparing to unpack .../35-libimport-into-perl_1.002005-1_all.deb ...
Unpacking libimport-into-perl (1.002005-1) ...
Selecting previously unselected package libstruct-dumb-perl.
Preparing to unpack .../36-libstruct-dumb-perl_0.09-1_all.deb ...
Unpacking libstruct-dumb-perl (0.09-1) ...
Selecting previously unselected package libio-async-perl.
Preparing to unpack .../37-libio-async-perl_0.74-1_all.deb ...
Unpacking libio-async-perl (0.74-1) ...
Selecting previously unselected package libio-pty-perl.
Preparing to unpack .../38-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ...
Unpacking libio-pty-perl (1:1.08-1.1+b5) ...
Selecting previously unselected package libipc-run-perl.
Preparing to unpack .../39-libipc-run-perl_20180523.0-1_all.deb ...
Unpacking libipc-run-perl (20180523.0-1) ...
Selecting previously unselected package liblist-compare-perl.
Preparing to unpack .../40-liblist-compare-perl_0.53-1_all.deb ...
Unpacking liblist-compare-perl (0.53-1) ...
Selecting previously unselected package liblist-moreutils-perl.
Preparing to unpack .../41-liblist-moreutils-perl_0.416-1+b4_amd64.deb ...
Unpacking liblist-moreutils-perl (0.416-1+b4) ...
Selecting previously unselected package librole-tiny-perl.
Preparing to unpack .../42-librole-tiny-perl_2.000006-1_all.deb ...
Unpacking librole-tiny-perl (2.000006-1) ...
Selecting previously unselected package libstrictures-perl.
Preparing to unpack .../43-libstrictures-perl_2.000006-1_all.deb ...
Unpacking libstrictures-perl (2.000006-1) ...
Selecting previously unselected package libsub-quote-perl.
Preparing to unpack .../44-libsub-quote-perl_2.006003-1_all.deb ...
Unpacking libsub-quote-perl (2.006003-1) ...
Selecting previously unselected package libmoo-perl.
Preparing to unpack .../45-libmoo-perl_2.003004-2_all.deb ...
Unpacking libmoo-perl (2.003004-2) ...
Selecting previously unselected package libparse-debianchangelog-perl.
Preparing to unpack .../46-libparse-debianchangelog-perl_1.2.0-13_all.deb ...
Unpacking libparse-debianchangelog-perl (1.2.0-13) ...
Selecting previously unselected package libpath-tiny-perl.
Preparing to unpack .../47-libpath-tiny-perl_0.108-1_all.deb ...
Unpacking libpath-tiny-perl (0.108-1) ...
Selecting previously unselected package libtext-levenshtein-perl.
Preparing to unpack .../48-libtext-levenshtein-perl_0.13-1_all.deb ...
Unpacking libtext-levenshtein-perl (0.13-1) ...
Selecting previously unselected package libtry-tiny-perl.
Preparing to unpack .../49-libtry-tiny-perl_0.30-1_all.deb ...
Unpacking libtry-tiny-perl (0.30-1) ...
Selecting previously unselected package libtype-tiny-perl.
Preparing to unpack .../50-libtype-tiny-perl_1.004004-1_all.deb ...
Unpacking libtype-tiny-perl (1.004004-1) ...
Selecting previously unselected package libyaml-0-2:amd64.
Preparing to unpack .../51-libyaml-0-2_0.2.1-1_amd64.deb ...
Unpacking libyaml-0-2:amd64 (0.2.1-1) ...
Selecting previously unselected package libyaml-libyaml-perl.
Preparing to unpack .../52-libyaml-libyaml-perl_0.79+repack-2_amd64.deb ...
Unpacking libyaml-libyaml-perl (0.79+repack-2) ...
Selecting previously unselected package patchutils.
Preparing to unpack .../53-patchutils_0.3.4-2+b1_amd64.deb ...
Unpacking patchutils (0.3.4-2+b1) ...
Selecting previously unselected package t1utils.
Preparing to unpack .../54-t1utils_1.41-3_amd64.deb ...
Unpacking t1utils (1.41-3) ...
Selecting previously unselected package lintian.
Preparing to unpack .../55-lintian_2.16.0_all.deb ...
Unpacking lintian (2.16.0) ...
Selecting previously unselected package sbuild-build-depends-lintian-dummy:armhf.
Preparing to unpack .../56-sbuild-build-depends-lintian-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ...
Setting up libapt-pkg-perl (0.1.36+b1) ...
Setting up libstruct-dumb-perl (0.09-1) ...
Setting up libdynaloader-functions-perl (0.003-1) ...
Setting up libclass-method-modifiers-perl (2.12-1) ...
Setting up liblist-compare-perl (0.53-1) ...
Setting up libio-pty-perl (1:1.08-1.1+b5) ...
Setting up libclone-perl (0.41-1+b1) ...
Setting up libyaml-0-2:amd64 (0.2.1-1) ...
Setting up libssl1.1:amd64 (1.1.1c-1) ...
Setting up libhtml-tagset-perl (3.20-3) ...
Setting up libfuture-perl (0.41-1) ...
Setting up libyaml-libyaml-perl (0.79+repack-2) ...
Setting up libtry-tiny-perl (0.30-1) ...
Setting up perl-openssl-defaults:amd64 (3) ...
Setting up libtext-levenshtein-perl (0.13-1) ...
Setting up libio-async-perl (0.74-1) ...
Setting up patchutils (0.3.4-2+b1) ...
Setting up libdigest-hmac-perl (1.03+dfsg-2) ...
Setting up libipc-system-simple-perl (1.25-4) ...
Setting up libnet-domain-tld-perl (1.75-1) ...
Setting up t1utils (1.41-3) ...
Setting up diffstat (1.62-1) ...
Setting up libb-hooks-op-check-perl (0.22-1+b1) ...
Setting up libipc-run-perl (20180523.0-1) ...
Setting up libsub-exporter-progressive-perl (0.001013-1) ...
Setting up libcapture-tiny-perl (0.48-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsub-name-perl (0.21-1+b3) ...
Setting up libpath-tiny-perl (0.108-1) ...
Setting up librole-tiny-perl (2.000006-1) ...
Setting up libdevel-globaldestruction-perl (0.14-1) ...
Setting up netbase (5.6) ...
Setting up libstrictures-perl (2.000006-1) ...
Setting up libsub-quote-perl (2.006003-1) ...
Setting up libexporter-tiny-perl (1.002001-1) ...
Setting up libclass-accessor-perl (0.51-1) ...
Setting up libnet-ip-perl (1.26-2) ...
Setting up liburi-perl (1.76-1) ...
Setting up libnet-ssleay-perl (1.88-1) ...
Setting up libfile-basedir-perl (0.08-1) ...
Setting up liblist-moreutils-perl (0.416-1+b4) ...
Setting up libtype-tiny-perl (1.004004-1) ...
Setting up libnet-dns-perl (1.20-1) ...
Setting up libdevel-callchecker-perl (0.008-1) ...
Setting up libhtml-parser-perl (3.72-3+b3) ...
Setting up libio-socket-ssl-perl (2.066-1) ...
Setting up libparams-classify-perl (0.015-1+b1) ...
Setting up libcgi-pm-perl (4.44-1) ...
Setting up libnet-smtp-ssl-perl (1.04-1) ...
Setting up libmodule-runtime-perl (0.016-1) ...
Setting up libmailtools-perl (2.21-1) ...
Setting up libparse-debianchangelog-perl (1.2.0-13) ...
Setting up libemail-valid-perl (1.202-1) ...
Setting up libimport-into-perl (1.002005-1) ...
Setting up libmoo-perl (2.003004-2) ...
Setting up lintian (2.16.0) ...
Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ...
Processing triggers for man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Processing triggers for libc-bin (2.28-10) ...

I: Lintian run was successful.

+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Reading package lists...
Building dependency tree...
Reading state information...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  sensible-utils
Use 'apt autoremove' to remove it.
The following packages will be REMOVED:
  autoconf* automake* autopoint* autotools-dev* binutils-arm-linux-gnueabihf*
  bsdmainutils* cpp-8-arm-linux-gnueabihf* cpp-arm-linux-gnueabihf*
  cross-config* crossbuild-essential-armhf* debhelper* dh-autoreconf*
  dh-strip-nondeterminism* diffstat* dpkg-cross* dwz* file*
  g++-8-arm-linux-gnueabihf* g++-arm-linux-gnueabihf*
  gcc-8-arm-linux-gnueabihf* gcc-8-arm-linux-gnueabihf-base* gcc-8-base:armhf*
  gcc-8-cross-base* gcc-9-base:armhf* gcc-9-cross-base*
  gcc-arm-linux-gnueabihf* gettext* gettext-base* groff-base* intltool-debian*
  libapt-pkg-perl* libarchive-zip-perl* libasan5:armhf* libasan5-armhf-cross*
  libatomic1:armhf* libatomic1-armhf-cross* libb-hooks-op-check-perl* libbsd0*
  libc6:armhf* libc6-armhf-cross* libc6-dev:armhf* libc6-dev-armhf-cross*
  libcapture-tiny-perl* libcgi-pm-perl* libclass-accessor-perl*
  libclass-method-modifiers-perl* libclone-perl* libconfig-auto-perl*
  libconfig-inifiles-perl* libcroco3* libdebian-dpkgcross-perl*
  libdevel-callchecker-perl* libdevel-globaldestruction-perl*
  libdigest-hmac-perl* libdynaloader-functions-perl* libemail-valid-perl*
  libexporter-tiny-perl* libfile-basedir-perl* libfile-homedir-perl*
  libfile-stripnondeterminism-perl* libfile-which-perl* libfuture-perl*
  libgcc-8-dev:armhf* libgcc-8-dev-armhf-cross* libgcc1:armhf*
  libgcc1-armhf-cross* libglib2.0-0* libgomp1:armhf* libgomp1-armhf-cross*
  libhtml-parser-perl* libhtml-tagset-perl* libicu63* libimport-into-perl*
  libio-async-perl* libio-pty-perl* libio-socket-ssl-perl* libio-string-perl*
  libipc-run-perl* libipc-system-simple-perl* liblist-compare-perl*
  liblist-moreutils-perl* liblocale-gettext-perl* libmagic-mgc* libmagic1*
  libmailtools-perl* libmodule-runtime-perl* libmoo-perl* libncurses6*
  libnet-dns-perl* libnet-domain-tld-perl* libnet-ip-perl*
  libnet-smtp-ssl-perl* libnet-ssleay-perl* libparams-classify-perl*
  libparse-debianchangelog-perl* libpath-tiny-perl* libpipeline1*
  librole-tiny-perl* libsigsegv2* libssl1.1* libstdc++-8-dev:armhf*
  libstdc++-8-dev-armhf-cross* libstdc++6:armhf* libstdc++6-armhf-cross*
  libstrictures-perl* libstruct-dumb-perl* libsub-exporter-progressive-perl*
  libsub-name-perl* libsub-override-perl* libsub-quote-perl*
  libtext-levenshtein-perl* libtimedate-perl* libtool* libtry-tiny-perl*
  libtype-tiny-perl* libubsan1:armhf* libubsan1-armhf-cross* libuchardet0*
  liburi-perl* libxml-libxml-perl* libxml-namespacesupport-perl*
  libxml-sax-base-perl* libxml-sax-perl* libxml-simple-perl* libxml2*
  libyaml-0-2* libyaml-libyaml-perl* libyaml-perl* lintian*
  linux-libc-dev:armhf* linux-libc-dev-armhf-cross* m4* man-db* netbase*
  patchutils* perl-openssl-defaults* po-debconf*
  sbuild-build-depends-lintian-dummy:armhf*
  sbuild-build-depends-main-dummy:armhf* t1utils* ucf*
0 upgraded, 0 newly installed, 141 to remove and 0 not upgraded.
After this operation, 251 MB disk space will be freed.
(Reading database ... 20243 files and directories currently installed.)
Removing sbuild-build-depends-main-dummy:armhf (0.invalid.0) ...
Removing crossbuild-essential-armhf (12.6) ...
Removing g++-arm-linux-gnueabihf (4:8.3.0-1) ...
Removing gcc-arm-linux-gnueabihf (4:8.3.0-1) ...
Removing g++-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Removing gcc-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Removing binutils-arm-linux-gnueabihf (2.32.51.20190727-1) ...
Removing sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ...
Removing lintian (2.16.0) ...
Removing cpp-arm-linux-gnueabihf (4:8.3.0-1) ...
Removing cpp-8-arm-linux-gnueabihf (8.3.0-19cross1) ...
Removing dpkg-cross (2.6.15-3) ...
Removing cross-config (2.6.15-3) ...
Removing diffstat (1.62-1) ...
Removing libdebian-dpkgcross-perl (2.6.15-3) ...
Removing gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-19cross1) ...
Removing libstdc++-8-dev:armhf (8.3.0-19) ...
Removing libgcc-8-dev:armhf (8.3.0-19) ...
Removing gcc-8-base:armhf (8.3.0-19) ...
Removing libstdc++-8-dev-armhf-cross (8.3.0-19cross1) ...
Removing libgcc-8-dev-armhf-cross (8.3.0-19cross1) ...
Removing gcc-8-cross-base (8.3.0-19cross1) ...
Removing libubsan1:armhf (9.1.0-10) ...
Removing libstdc++6:armhf (9.1.0-10) ...
Removing libubsan1-armhf-cross (9.1.0-8cross1) ...
Removing libstdc++6-armhf-cross (9.1.0-8cross1) ...
Removing libapt-pkg-perl (0.1.36+b1) ...
Removing libasan5:armhf (9.1.0-10) ...
Removing libasan5-armhf-cross (9.1.0-8cross1) ...
Removing libatomic1:armhf (9.1.0-10) ...
Removing libatomic1-armhf-cross (9.1.0-8cross1) ...
Removing libmoo-perl (2.003004-2) ...
Removing libimport-into-perl (1.002005-1) ...
Removing libmodule-runtime-perl (0.016-1) ...
Removing libparams-classify-perl (0.015-1+b1) ...
Removing libdevel-callchecker-perl (0.008-1) ...
Removing libb-hooks-op-check-perl (0.22-1+b1) ...
Removing libc6-dev:armhf (2.28-10) ...
Removing libgomp1:armhf (9.1.0-10) ...
Removing libc6-dev-armhf-cross (2.28-10cross3) ...
Removing libgomp1-armhf-cross (9.1.0-8cross1) ...
Removing libcapture-tiny-perl (0.48-1) ...
Removing libparse-debianchangelog-perl (1.2.0-13) ...
Removing libcgi-pm-perl (4.44-1) ...
Removing libclass-accessor-perl (0.51-1) ...
Removing librole-tiny-perl (2.000006-1) ...
Removing libclass-method-modifiers-perl (2.12-1) ...
Removing libclone-perl (0.41-1+b1) ...
Removing libconfig-auto-perl (0.44-1) ...
Removing libconfig-inifiles-perl (3.000001-1) ...
Removing libdevel-globaldestruction-perl (0.14-1) ...
Removing libemail-valid-perl (1.202-1) ...
Removing libnet-dns-perl (1.20-1) ...
Removing libdigest-hmac-perl (1.03+dfsg-2) ...
Removing libdynaloader-functions-perl (0.003-1) ...
Removing libtype-tiny-perl (1.004004-1) ...
Removing liblist-moreutils-perl (0.416-1+b4) ...
Removing libexporter-tiny-perl (1.002001-1) ...
Removing libfile-basedir-perl (0.08-1) ...
Removing libfile-homedir-perl (1.004-1) ...
Removing libfile-which-perl (1.23-1) ...
Removing libio-async-perl (0.74-1) ...
Removing libfuture-perl (0.41-1) ...
Removing libgcc1-armhf-cross (1:9.1.0-8cross1) ...
Removing libhtml-parser-perl (3.72-3+b3) ...
Removing libhtml-tagset-perl (3.20-3) ...
Removing libxml-simple-perl (2.25-1) ...
Removing libxml-libxml-perl (2.0134+dfsg-1) ...
update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Removing libipc-run-perl (20180523.0-1) ...
Removing libio-pty-perl (1:1.08-1.1+b5) ...
Removing libmailtools-perl (2.21-1) ...
Removing libnet-smtp-ssl-perl (1.04-1) ...
Removing libio-socket-ssl-perl (2.066-1) ...
Removing libio-string-perl (1.08-3) ...
Removing libipc-system-simple-perl (1.25-4) ...
Removing liblist-compare-perl (0.53-1) ...
Removing liblocale-gettext-perl (1.07-3+b4) ...
Removing libnet-domain-tld-perl (1.75-1) ...
Removing libnet-ip-perl (1.26-2) ...
Removing libnet-ssleay-perl (1.88-1) ...
Removing libpath-tiny-perl (0.108-1) ...
Removing perl-openssl-defaults:amd64 (3) ...
Removing libssl1.1:amd64 (1.1.1c-1) ...
Removing libstrictures-perl (2.000006-1) ...
Removing libstruct-dumb-perl (0.09-1) ...
Removing libsub-exporter-progressive-perl (0.001013-1) ...
Removing libsub-name-perl (0.21-1+b3) ...
Removing libsub-quote-perl (2.006003-1) ...
Removing libtext-levenshtein-perl (0.13-1) ...
Removing libtimedate-perl (2.3000-2) ...
Removing libtry-tiny-perl (0.30-1) ...
Removing liburi-perl (1.76-1) ...
Removing libxml-sax-perl (1.02+dfsg-1) ...
update-perl-sax-parsers: Unregistering Perl SAX parser XML::SAX::PurePerl with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Removing libxml-namespacesupport-perl (1.12-1) ...
Removing libxml-sax-base-perl (1.09-1) ...
Removing libyaml-libyaml-perl (0.79+repack-2) ...
Removing libyaml-0-2:amd64 (0.2.1-1) ...
Removing libyaml-perl (1.29-1) ...
Removing linux-libc-dev:armhf (4.19.37-6) ...
Removing linux-libc-dev-armhf-cross (4.19.37-5cross3) ...
Removing netbase (5.6) ...
Removing patchutils (0.3.4-2+b1) ...
Removing t1utils (1.41-3) ...
Removing ucf (3.0038+nmu1) ...
Removing gcc-9-cross-base (9.1.0-8cross1) ...
Removing libc6-armhf-cross (2.28-10cross3) ...
Removing dh-autoreconf (19) ...
Removing debhelper (12.2.3) ...
Removing dh-strip-nondeterminism (1.4.0-1) ...
Removing automake (1:1.16.1-4) ...
Removing autoconf (2.69-11) ...
Removing autopoint (0.19.8.1-9) ...
Removing libtool (2.4.6-10) ...
Removing autotools-dev (20180224.1) ...
Removing man-db (2.8.5-2) ...
Removing bsdmainutils (11.1.2+b1) ...
Removing dwz (0.12.20190723-1) ...
Removing file (1:5.37-5) ...
Removing po-debconf (1.0.21) ...
Removing intltool-debian (0.35.0+20060710.5) ...
Removing gettext (0.19.8.1-9) ...
Removing gettext-base (0.19.8.1-9) ...
Removing groff-base (1.22.4-3) ...
Removing libfile-stripnondeterminism-perl (1.4.0-1) ...
Removing libarchive-zip-perl (1.64-1) ...
Removing libbsd0:amd64 (0.9.1-2) ...
Removing libc6:armhf (2.28-10) ...
Removing libcroco3:amd64 (0.6.12-3) ...
Removing libgcc1:armhf (1:9.1.0-10) ...
Removing libglib2.0-0:amd64 (2.60.6-1) ...
Removing libxml2:amd64 (2.9.4+dfsg1-7+b3) ...
Removing libicu63:amd64 (63.2-2) ...
Removing libmagic1:amd64 (1:5.37-5) ...
Removing libmagic-mgc (1:5.37-5) ...
Removing libncurses6:amd64 (6.1+20190713-2) ...
Removing libpipeline1:amd64 (1.5.1-2) ...
Removing m4 (1.4.18-2) ...
Removing libsigsegv2:amd64 (2.12-2) ...
Removing libsub-override-perl (0.09-2) ...
Removing libuchardet0:amd64 (0.0.6-3) ...
Removing gcc-9-base:armhf (9.1.0-10) ...
Processing triggers for ccache (3.7.2-2) ...
Updating symlinks in /usr/lib/ccache ...
Processing triggers for libc-bin (2.28-10) ...
(Reading database ... 12554 files and directories currently installed.)
Purging configuration files for libglib2.0-0:amd64 (2.60.6-1) ...
Purging configuration files for libssl1.1:amd64 (1.1.1c-1) ...
Purging configuration files for libmagic1:amd64 (1:5.37-5) ...
Purging configuration files for lintian (2.16.0) ...
Purging configuration files for man-db (2.8.5-2) ...
Purging configuration files for libxml-sax-perl (1.02+dfsg-1) ...
Purging configuration files for cross-config (2.6.15-3) ...
Purging configuration files for bsdmainutils (11.1.2+b1) ...
Purging configuration files for ucf (3.0038+nmu1) ...
Purging configuration files for autoconf (2.69-11) ...
Purging configuration files for libc6:armhf (2.28-10) ...
Purging configuration files for groff-base (1.22.4-3) ...
Purging configuration files for netbase (5.6) ...
Purging configuration files for dpkg-cross (2.6.15-3) ...
Purging configuration files for libdebian-dpkgcross-perl (2.6.15-3) ...

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any
Build-Space: n/a
Build-Time: 24
Distribution: unstable-amd64-sbuild
Foreign Architectures: armhf
Host Architecture: armhf
Install-Time: 15
Job: /home/build/sbuild-setup/repo/pool/main/m/mafft/mafft_7.429-1.dsc
Lintian: pass
Machine Architecture: amd64
Package: mafft
Package-Time: 43
Source-Version: 7.429-1
Space: n/a
Status: successful
Version: 7.429-1
--------------------------------------------------------------------------------
Finished at 2019-08-03T12:09:31Z
Build needed 00:00:43, no disk space