cff-version: 1.2.0
message: "If you use this software, please cite it using the metadata in this file."

title: "FlashDEG"
version: "1.0.0"
license: "MIT"
repository-code: "https://github.com/tus-kondolab/flashdeg"
url: "https://github.com/tus-kondolab/flashdeg"

# Uncomment when an actual release date is assigned.
# date-released: "2026-MM-DD"

# Keep this short; it is shown by GitHub and citation managers.
abstract: "FlashDEG: A fast, lightweight C++ implementation of DESeq2-compatible differential expression analysis."

keywords:
  - RNA-seq
  - differential expression
  - bioinformatics
  - gene expression
  - DESeq2

authors:
  - family-names: "Kondo"
    given-names: "Shu"
    orcid: "https://orcid.org/0000-0002-4625-8379"
    affiliation: "Tokyo University of Science"

# Uncomment and fill this section once a paper, preprint, or Zenodo DOI exists.
# doi: "10.0000/zenodo.0000000"
#
# preferred-citation:
#   type: article
#   title: "PAPER_TITLE"
#   authors:
#     - family-names: "FAMILY_NAME"
#       given-names: "GIVEN_NAME"
#       # orcid: "https://orcid.org/0000-0000-0000-0000"
#   journal: "JOURNAL_NAME"
#   year: 2026
#   doi: "10.0000/ARTICLE_DOI"
#   url: "https://example.org/paper"