track caddSuper1_7
shortLabel CADD 1.7
longLabel CADD 1.7 Score for all single-basepair mutations and selected insertions/deletions
superTrack on hide
type bed
visibility hide
group phenDis
color 100,130,160
html caddSuper1_7
pennantIcon New red ../goldenPath/newsarch.html#100924 "October 9, 2024"

track cadd1_7
shortLabel CADD 1.7
longLabel CADD 1.7 Score for all possible single-basepair mutations (zoom in for scores)
type bigWig
compositeTrack on
parent caddSuper1_7
visibility dense
#maxWindowToQuery 500000
group phenDis
color 100,130,160
html caddSuper1_7
maxWindowToDraw 10000000
mouseOverFunction noAverage
pennantIcon New red ../goldenPath/newsarch.html#100924 "October 9, 2024"

        track cadd1_7_A
        shortLabel Mutation: A
        longLabel CADD 1.7 Score: Mutation is A
        type bigWig
        parent cadd1_7 on
        visibility dense
        bigDataUrl /gbdb/$D/cadd1.7/a.bw
        maxHeightPixels 128:20:8
        viewLimits 10:50
        viewLimitsMax 0:100
	setColorWith /gbdb/$D/cadd1.7/a.color.bb

        track cadd1_7_C
        shortLabel Mutation: C
        longLabel CADD 1.7 Score: Mutation is C
        type bigWig
        parent cadd1_7 on
        visibility dense
        bigDataUrl /gbdb/$D/cadd1.7/c.bw
        maxHeightPixels 128:20:8
        viewLimits 10:50
        viewLimitsMax 0:100
	setColorWith /gbdb/$D/cadd1.7/c.color.bb

        track cadd1_7_G
        shortLabel Mutation: G
        longLabel CADD 1.7 Score: Mutation is G
        type bigWig
        parent cadd1_7 on
        visibility dense
        bigDataUrl /gbdb/$D/cadd1.7/g.bw
        maxHeightPixels 128:20:8
        viewLimits 10:50
        viewLimitsMax 0:100
	setColorWith /gbdb/$D/cadd1.7/g.color.bb

        track cadd1_7_T
        shortLabel Mutation: T
        longLabel CADD 1.7 Score: Mutation is T
        type bigWig
        parent cadd1_7 on
        visibility dense
        bigDataUrl /gbdb/$D/cadd1.7/t.bw
        maxHeightPixels 128:20:8
        viewLimits 10:50
        viewLimitsMax 0:100
	setColorWith /gbdb/$D/cadd1.7/t.color.bb

track cadd1_7_Ins
shortLabel CADD 1.7 Ins
longLabel CADD 1.7 Score: Insertions - label is length of insertion
type bigBed 9 +
parent caddSuper1_7 on
visibility dense
bigDataUrl /gbdb/$D/cadd1.7/ins.bb
mouseOver Mutation: $change CADD Phred score: $phred
html caddSuper1_7
filter.score 10:100
filterByRange.score on
filterLabel.score Show only items with PHRED scale score of
filterLimits.score 0:100
#maxWindowCoverage 40000
#maxItems 100000
#maxWindowToDraw 9000000
pennantIcon New red ../goldenPath/newsarch.html#100924 "October 9, 2024"

track cadd1_7_Del
shortLabel CADD 1.7 Del
longLabel CADD 1.7 Score: Deletions - label is length of deletion
type bigBed 9 +
parent caddSuper1_7 on
visibility dense
bigDataUrl /gbdb/$D/cadd1.7/del.bb
mouseOver Mutation: $change CADD Phred score: $phred
html caddSuper1_7
filter.score 10:100
filterByRange.score on
filterLabel.score Show only items with PHRED scale score of
filterLimits.score 0:100
#maxWindowCoverage 40000
#maxItems 100000
#maxWindowToDraw 9000000
pennantIcon New red ../goldenPath/newsarch.html#100924 "October 9, 2024"