track crossTissueMaps
superTrack on
shortLabel Cross Tissue Nuclei
longLabel Single Nuclei sequenced across many tissues
visibility hide
group singleCell
configureByPopup off

    track crossTissueMapsTissueCellType
    parent crossTissueMaps
    html crossTissueMaps
    type bigBarChart
    url https://cells.ucsc.edu/?ds=tabula-sapiens+all&gene=$<name2>
    urlLabel View on the UCSC Cell Browser: $<name2>
    visibility pack
    shortLabel Cross Tissue Nuclei
    longLabel Cross tissue nuclei RNA by tissue and cell type
    priority 1
    barChartMetric gene/genome
    barChartUnit parts per million
    defaultLabelFields name
    labelFields name,name2
    bigDataUrl /gbdb/hg38/bbi/crossTissueMaps/tissue_cell_type.bb
    barChartStatsUrl /gbdb/hg38/bbi/crossTissueMaps/tissue_cell_type.facets
    barChartCategoryUrl /gbdb/hg38/bbi/crossTissueMaps/tissue_cell_type.categories
    barChartFacets tissue,cell_class,cell_subclass,cell_type
    barChartStretchToItem on
    barChartMerge on

    track crossTissueMapsFullDetails
    parent crossTissueMaps
    html crossTissueMaps
    type bigBarChart
    url https://cells.ucsc.edu/?ds=tabula-sapiens+all&gene=$<name2>
    urlLabel View on the UCSC Cell Browser: $<name2>
    visibility hide
    shortLabel Cross Tissue Details
    longLabel Cross tissue nuclei full details
    priority 2
    barChartMetric gene/genome
    barChartUnit parts per million
    defaultLabelFields name
    labelFields name,name2
    bigDataUrl /gbdb/hg38/bbi/crossTissueMaps/facet_detailed.bb
    barChartStatsUrl /gbdb/hg38/bbi/crossTissueMaps/facet_detailed.facets
    barChartCategoryUrl /gbdb/hg38/bbi/crossTissueMaps/facet_detailed.categories
    barChartFacets tissue,cell_class,cell_subclass,cell_type,granular_cell_type,sex,donor
    maxWindowToDraw 10000000
    barChartStretchToItem on
    barChartMerge on

    track gtexImmuneAtlasFullDetails
    parent crossTissueMaps
    html crossTissueMaps
    type bigBarChart
    visibility pack
    url https://cells.ucsc.edu/?ds=tabula-sapiens+all&gene=$<name2>
    urlLabel View on the UCSC Cell Browser: $<name2>
    shortLabel GTEx Immune Atlas
    longLabel GTEx single nuclei immune expression
    priority 3
    barChartMetric gene/genome
    barChartUnit parts per million
    defaultLabelFields name
    labelFields name,name2
    bigDataUrl /gbdb/hg38/bbi/gtexImmuneAtlas/facet_detailed_class.bb
    barChartStatsUrl /gbdb/hg38/bbi/gtexImmuneAtlas/facet_detailed_class.facets
    barChartCategoryUrl /gbdb/hg38/bbi/gtexImmuneAtlas/facet_detailed.categories
    barChartFacets tissue,cell_type,cell_class,sex,donor
    barChartStretchToItem on
    barChartMerge on