{
  "module": {
    "name": "Research Toolbox",
    "category": "Research",
    "version": "1.0",
    "summary": "Four-source substrate and RTT/1–3 engine patterns for structured research reasoning.",
    "purpose": "Provide canonical research operators, substrate construction, and triadic engine integration.",
    "audience": "Students + AIs",
    "status": "coherent"
  },

  "files": [
    {
      "file": "RT_Capture.md",
      "role": "profile",
      "analyzer_layer": "surface",
      "purpose": "Defines the surface identity of the Research Toolbox module."
    },
    {
      "file": "RT_module.json",
      "role": "engine",
      "analyzer_layer": "structural",
      "purpose": "Module manifest describing structure, roles, and coherence layers."
    },
    {
      "file": "README.md",
      "role": "index",
      "analyzer_layer": "surface",
      "purpose": "Student-facing overview of the Research Toolbox."
    },
    {
      "file": "index.html",
      "role": "index",
      "analyzer_layer": "surface",
      "purpose": "Full canonical metadata + hero integration + session context."
    },
    {
      "file": "Quickstart.md",
      "role": "example",
      "analyzer_layer": "operator",
      "purpose": "Student quickstart for stack → compare → regime → coherence."
    },
    {
      "file": "Quickstart_Agent.md",
      "role": "example",
      "analyzer_layer": "operator",
      "purpose": "Agent quickstart for safe, triadic research reasoning."
    },

    /* Exercises */
    {
      "file": "exercises/social_security_protofund.md",
      "role": "example",
      "analyzer_layer": "structural",
      "purpose": "Full multi-module proto-fund analysis exercise."
    },
    {
      "file": "exercises/social_security_protofund_worksheet.md",
      "role": "template",
      "analyzer_layer": "operator",
      "purpose": "Student worksheet for the proto-fund exercise."
    },
    {
      "file": "exercises/social_security_protofund_instructor.md",
      "role": "reference",
      "analyzer_layer": "coherence",
      "purpose": "Instructor guide for the proto-fund exercise."
    },
    {
      "file": "exercises/before_after_rtt_visualization.md",
      "role": "example",
      "analyzer_layer": "surface",
      "purpose": "Before/After RTT visualization and interpretation."
    },
    {
      "file": "exercises/operational_health_check_diagram.md",
      "role": "map",
      "analyzer_layer": "structural",
      "purpose": "Triadic diagram of the operational health check."
    },

    /* Visuals */
    {
      "file": "visuals/research_toolbox_hero.png",
      "role": "signature",
      "analyzer_layer": "surface",
      "purpose": "Hero image for the Research Toolbox."
    },
    {
      "file": "visuals/research_toolbox_glyph.svg",
      "role": "signature",
      "analyzer_layer": "operator",
      "purpose": "Canonical Research Toolbox glyph."
    },
    {
      "file": "visuals/research_toolbox_glyph_animated.svg",
      "role": "signature",
      "analyzer_layer": "resonance",
      "purpose": "Animated glyph with pulse + triadic rotation."
    },
    {
      "file": "visuals/research_toolbox_badge.svg",
      "role": "signature",
      "analyzer_layer": "surface",
      "purpose": "Small animated badge for navigation and headers."
    },
    {
      "file": "visuals/research_toolbox_tel_echo.svg",
      "role": "map",
      "analyzer_layer": "structural",
      "purpose": "TEL echo animation: Research → RTT → SARG."
    },
    {
      "file": "visuals/before_after_rtt.svg",
      "role": "map",
      "analyzer_layer": "surface",
      "purpose": "Before/After RTT diagram."
    },
    {
      "file": "visuals/before_after_rtt_animated.svg",
      "role": "map",
      "analyzer_layer": "resonance",
      "purpose": "Animated Before/After RTT visualization."
    },
    {
      "file": "visuals/triadic_operational_health.svg",
      "role": "map",
      "analyzer_layer": "structural",
      "purpose": "Operational health triadic diagram."
    },

    /* Diagrams */
    {
      "file": "diagrams/triadic_super_diagram.md",
      "role": "map",
      "analyzer_layer": "structural",
      "purpose": "Full triadic super-stack diagram."
    },
    {
      "file": "diagrams/four_source_substrate_diagram.md",
      "role": "map",
      "analyzer_layer": "surface",
      "purpose": "Four-source substrate diagram."
    },
    {
      "file": "diagrams/rtt_engine_triad_diagram.md",
      "role": "map",
      "analyzer_layer": "operator",
      "purpose": "RTT/1–3 engine triad diagram."
    },
    {
      "file": "diagrams/tel_echo_map.md",
      "role": "map",
      "analyzer_layer": "resonance",
      "purpose": "TEL echo propagation map."
    },
    {
      "file": "diagrams/mode_opacity_chain.md",
      "role": "map",
      "analyzer_layer": "coherence",
      "purpose": "Research → Mode → Opacity safety-visibility chain."
    },

    /* Glyphs */
    {
      "file": "glyphs/glyph_legend.md",
      "role": "reference",
      "analyzer_layer": "surface",
      "purpose": "Legend for the Research Toolbox glyph."
    },
    {
      "file": "glyphs/glyph_animation_spec.md",
      "role": "reference",
      "analyzer_layer": "resonance",
      "purpose": "Pulse, glow, and triadic rotation animation spec."
    },

    /* LINEAGE */
    {
      "file": "LINEAGE/forecast_vs_actuals.md",
      "role": "reference",
      "analyzer_layer": "structural",
      "purpose": "LINEAGE entry for the Forecast vs Actuals pattern."
    }
  ]
}