VIVO Core Ontology The VIVO Ontology is used to represent the expertise of people engaged in the creation, transmission, and preservation of knowledge and creative works. The VIVO ontology (hereafter referred to as “the ontology”) represents expertise by describing the activities and accomplishments of people in terms of their relationships to particular artifacts of the work, resources they use, institutions that employ them, and other indicators. The ontology is independent of knowledge or creative domain. The ontology supports the identification, evaluation, and impact assessment of individual people and groups of people, as well as identification and reuse of the works of the people. vivo has border with 2010-05-01 United Nations cartographic maps United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf http://www.un.org/Depts/Cartographic/map/profile/world00.pdf has member country or territory is administered by 2010-05-01 United Nations cartographic maps United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf http://www.un.org/Depts/Cartographic/map/profile/world00.pdf in geographic grouping is predecessor of 2010-04-15 United Nations Statistics Division United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm http://unstats.un.org/unsd/methods/m49/m49chang.htm http://unstats.un.org/unsd/methods/m49/m49chgef.htm is successor of 2010-04-15 United Nations Statistics Division United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm http://unstats.un.org/unsd/methods/m49/m49chang.htm http://unstats.un.org/unsd/methods/m49/m49chgef.htm has contact info contact info for context for has context has contact agent part of has part realized in realizedIn realized-in [copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003]) (forall (x y z t) (if (and (RealizableEntity x) (Process y) (realizesAt y x t) (bearerOfAt z x t)) (hasParticipantAt y z t))) // axiom label in BFO2 CLIF: [106-002] if a realizable entity b is realized in a process p, then p stands in the has_participant relation to the bearer of b. (axiom label in BFO2 Reference: [106-002]) realizes (forall (x y t) (if (realizesAt x y t) (and (Process x) (or (Disposition y) (Role y)) (exists (z) (and (MaterialEntity z) (hasParticipantAt x z t) (bearerOfAt z y t)))))) // axiom label in BFO2 CLIF: [059-003] realizes realizes to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003]) provides access to An access service that provides access to a flow cytometer. Instruments, reagents, organisms, or software for which the service provides access. PERSON: Melissa Haendel PERSON: Melissa Haendel change the domain type to access service uses Here there are things to be fixed (for instance a service can use a technique...) Microsoft powerpoint is commonly used in research laboratories to prepare presentations. PERSON: Melissa Haendel PERSON: Melissa Haendel Software or protocol used by the laboratory. uses has expertise in technique Brian Druker has expertise in cancer research. PERSON: Melissa Haendel PERSON: Melissa Haendel Technique in which the person is proficient. has expertise manufacturer Organization or person that created the resource. PERSON: Melissa Haendel PERSON: Melissa Haendel Santa Cruz Biotechnology is the manufacturer of many antibodies. has manufacturer contact or provider for service A core lab providing cell sorting to individual labs. PERSON: Melissa Haendel PERSON: Melissa Haendel Service offered by the organization. provides services specifies the use of A protocol can specify the use of a flow cytometer. Instruments, techniques, reagents, organisms, or software that are referenced in a protocol. PERSON: Melissa Haendel PERSON: Melissa Haendel specifies the use of used by A laboratory uses Microsoft Word. Laboratory that uses the protocol or software. PERSON: Melissa Haendel PERSON: Melissa Haendel used by service provided by A core laboratory provides a service. Organization or laboratory performing the service. PERSON: Melissa Haendel PERSON: Melissa Haendel service provided by performs technique A cancer researcher performs apoptosis assays. PERSON: Melissa Haendel PERSON: Melissa Haendel Technique carried out by the person or laboratory. is performed by Confocal microscopy is performed by a confocal core laboratory. PERSON: Melissa Haendel PERSON: Melissa Haendel Person or laboratory that performs the service or technique. is performed by has documentation An antibody has documentation describing attributes of the antibody. Document that contains relevant resource information. PERSON: Melissa Haendel PERSON: Melissa Haendel has documentation realizes protocol A sequencing protocol used for next generation sequencing. PERSON: Melissa Haendel PERSON: Melissa Haendel Protocol used to perform the service. placeholder: need to be modeled for the proper kind of service (production services) realizes protocol uses software PERSON: Melissa Haendel PERSON: Melissa Haendel Placeholder needs to be redesign Sequence analysis software. Software used to perform the service. true uses software related technique Flow cytometry is a related technique for a flow cytometer instrument. Method in which the resource can be used. PERSON: Melissa Haendel PERSON: Melissa Haendel related technique used to study A study of hibernation in bears. Biological process studied in the organism. PERSON: Melissa Haendel PERSON: Melissa Haendel used to study has residency requirement A research opportunity requires applicants to be US citizens. PERSON: Melissa Haendel PERSON: Melissa Haendel US residency status of applicants that may apply for the student research opportunity. has residency requirement related research project A research project studying breast cancer. PERSON: Melissa Haendel PERSON: Melissa Haendel Research project during which the biological specimen was collected. related research project related biological specimen A breast cancer specimen. Biological specimen collected as part of the research project. PERSON: Melissa Haendel PERSON: Melissa Haendel related biological specimen has phase PERSON: Melissa Haendel PERSON: Melissa Haendel Phase 1 clinical trial. Phase of a clinical trial to evaluate risk and to clinically evaluate the efficacy of drugs or biologicals. has phase performs human study Human study performed by the organization. PERSON: Melissa Haendel PERSON: Melissa Haendel The Jackson Heart Institute performs human studies on heart disease. performs human study performed by organization Jackson State University performs human studies on heart disease. Organization that performs the human study. PERSON: Melissa Haendel PERSON: Melissa Haendel human study performed by has measurement unit label is about 7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of "mentions" relation. Weaken the is_about relationship to be primitive. We will try to build it back up by elaborating the various subproperties that are more precisely defined. Some currently missing phenomena that should be considered "about" are predications - "The only person who knows the answer is sitting beside me" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic. Smith, Ceusters, Ruttenberg, 2000 years of philosophy This document is about information artifacts and their representations is_about is a (currently) primitive relation that relates an information artifact to an entity. person:Alan Ruttenberg mentions is quality measurement of 8/6/2009 Alan Ruttenberg: The strategy is to be rather specific with this relationship. There are other kinds of measurements that are not of qualities, such as those that measure time. We will add these as separate properties for the moment and see about generalizing later Alan Ruttenberg From the second IAO workshop [Alan Ruttenberg 8/6/2009: not completely current, though bringing in comparison is probably important] This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it "measuring" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. Werner suggests a solution based on "Magnitudes" a proposal for which we are awaiting details. -- From the second IAO workshop, various comments, [commented on by Alan Ruttenberg 8/6/2009] unit of measure is a quality, e.g. the length of a ruler. [We decided to hedge on what units of measure are, instead talking about measurement unit labels, which are the information content entities that are about whatever measurement units are. For IAO we need that information entity in any case. See the term measurement unit label] [Some struggling with the various subflavors of is_about. We subsequently removed the relation represents, and describes until and only when we have a better theory] a represents b means either a denotes b or a describes describe: a describes b means a is about b and a allows an inference of at least one quality of b We have had a long discussion about denotes versus describes. From the second IAO workshop: An attempt at tieing the quality to the measurement datum more carefully. a is a magnitude means a is a determinate quality particular inhering in some bearer b existing at a time t that can be represented/denoted by an information content entity e that has parts denoting a unit of measure, a number, and b. The unit of measure is an instance of the determinable quality. From the second meeting on IAO: An attempt at defining assay using Barry's "reliability" wording assay: process and has_input some material entity and has_output some information content entity and which is such that instances of this process type reliably generate outputs that describes the input. This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it "measuring" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. Werner suggests a solution based on "Magnitudes" a proposal for which we are awaiting details. m is a quality measurement of q at t when q is a quality there is a measurement process p that has specified output m, a measurement datum, that is about q is quality measured as 2009/10/19 Alan Ruttenberg. Named 'junk' relation useful in restrictions, but not a real instance relationship Person:Alan Ruttenberg inverse of the relation of is quality measurement of has specified input 8/17/09: specified inputs of one process are not necessarily specified inputs of a larger process that it is part of. This is in contrast to how 'has participant' works. PERSON: Bjoern Peters PERSON: Larry Hunter PERSON: Melanie Coutot has_specified_input A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of. PERSON: Alan Ruttenberg see is_input_of example_of_usage has specified output PERSON: Bjoern Peters PERSON: Larry Hunter PERSON: Melanie Courtot has_specified_output A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of. PERSON: Alan Ruttenberg manufactured by Alan Ruttenberg Liju Fan c is_manufactured_by o means that there was a process p in which c was built in which a person, or set of people or machines did the work(bore the "Manufacturer Role", and those people/and or machines were members or of directed by the organization to do this. has_make has_manufacturer http://www.affymetrix.com/products/arrays/specific/hgu133.affx is_manufactered_by http://www.affymetrix.com/ (if we decide to use these URIs for the actual entities) is_manufactured_by is specified output of PERSON:Bjoern Peters is_specified_output_of A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of. Alan Ruttenberg achieves planned objective A cell sorting process achieves the objective specification 'material separation objective' BP, AR, PPPB branch PPPB branch derived This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process. modified according to email thread from 1/23/09 in accordince with DT and PPPB branch has grain PAPER: Granularity, scale and collectivity: When size does and does not matter, Alan Rector, Jeremy Rogers, Thomas Bittner, Journal of Biomedical Informatics 39 (2006) 333-349 has grain the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car. Discussion in Karslruhe with, among others, Alan Rector, Stefan Schulz, Marijke Keet, Melanie Courtot, and Alan Ruttenberg. Definition take from the definition of granular parthood in the cited paper. Needs work to put into standard form PERSON: Alan Ruttenberg objective achieved by This relation obtains between a a objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process. definition needs clean up to indicate directionality inheres in This clarifies that only specifically dependent continuants inhere in (specifically) one independent continuant over all time. For GDCs, there in implicitly inherence to all the independent continuants in which the concretizations inhere. Should add a 'cardinality 1' restriction to the definition of specifically dependent continuant. This relation belongs in BFO/RO, and will be in BFO 2 bearer of participates in has participant derives from location of contained in contains located in adjacent to has input has output member of has member output of produces Melissa Haendel a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix. produced by contributor affirmed by The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html http://purl.org/ontology/bibo/ A legal decision that affirms a ruling. annotates The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. http://purl.org/ontology/bibo/ Critical or explanatory note for a Document. stable cited by cites Court Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property "unstable". http://purl.org/ontology/bibo/ A court associated with a legal document; for example, that which issues a decision. unstable related degree The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term "unstable". The bibo editorial note is: "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen." http://purl.org/ontology/bibo/ unstable The thesis degree. We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen. director Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . http://purl.org/ontology/bibo/ A Film director. stable distributor Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . interviewee http://purl.org/ontology/bibo/ stable An agent that is interviewed by another agent. interviewer http://purl.org/ontology/bibo/ An agent that interview another agent. stable issuer An entity responsible for issuing often informally published documents such as press releases, reports, etc. This term is classified as unstable by bibo. http://purl.org/ontology/bibo/ An entity responsible for issuing often informally published documents such as press releases, reports, etc. unstable performer http://purl.org/ontology/bibo/ stable presented at event Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product. http://purl.org/ontology/bibo/ unstable Relates a document to an event; for example, a paper to a conference. related documents Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product. http://purl.org/ontology/bibo/ Relates an event to associated documents; for example, conference to a paper. unstable recipient http://purl.org/ontology/bibo/ An agent that receives a communication document. stable reproduced in reversed by The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html http://purl.org/ontology/bibo/ A legal decision that reverses a ruling. review of The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used. status paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this. subsequent legal decision Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html http://purl.org/ontology/bibo/ A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.). transcript of The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable. http://purl.org/ontology/bibo/ Relates a document to some transcribed original. unstable translation of Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . http://purl.org/ontology/bibo/ stable Relates a translated document to the original document. translator has global citation frequency A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date. A property linking a publication entity to the property c40:GlobalCitationCount that specify how many times a work has been cited by others, according to a particular information source on a particular date. has global count source A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date. A property linking the property c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date. cites as data source The citing entity cites the cited entity as source of data. is cited as data source by The cited entity is cited as a data source by the citing entity. has affiliated organization assigned by Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance. assignee assignee for patent assigns concept for Orcid ID confirmation Indicates that the Orcid ID has been confirmed by this Person contributor date filed date issued date/time interval date/time precision date/time value degree candidacy distributes Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . distributes funding from For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. credential eligibility attained end equipment for expiration date featured in This is done through a restriction on the foaf:Person class. features This is done through a restriction on the foaf:Person class. provides funding for geographic focus geographic focus of governing authority for subcontracted through associated concept has collaborator Fran has collaborator Jim, they work together regularly. Two agents are collaborators if they work together to produce common results. PERSON: Michael Conlon Merriam Webster (https://www.merriam-webster.com/dictionary/collaborator) has equipment has facility funding provided via governing authority predecessor organization has prerequisite proceedings A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering. published in research areas has subject area successor organization has translation Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . supported by an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant) offered by offers ORCID iD This is now an object property where the object value is a resource of the form <http://orcid.org/NNNN-NNNN-NNNN-NNNN>. This is to support connecting VIVO and ORCID in the linked data web. Note: a person can have multiple ORCID iDs. true prerequisite for proceedings of A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering. provides funding through For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. publication venue for publisher Public Definition source (http://www.answers.com/topic/publisher). publisher of Public Definition source (http://www.answers.com/topic/publisher). related by Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent. relates Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship. reproduces research area of reviewed in The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used. contributes to award sponsored by sponsors award or honor start subcontracts grant subject area of supported by general relationship of support supported publications or other works an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant) supports general relationship of support translator of valid in access provided by documentation for project or resource protocol realized by implements is encoded in has agent deprecated property same as broader concept Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy . Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy . narrower concept Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy . Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy . related concept has address has calendar link has calendar request has calendar busy has category has email has formatted name has geo has messaging has key has language has logo member To include a member in the group this vCard represents has name has nickname has note has organization name has organizational unit name has photo has related has sound has telephone has time zone has title has URL GDP 2010-12-16 GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD World Bank World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD http://data.worldbank.org/indicator/NY.GDP.MKTP.CD http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD http://data.worldbank.org/indicator/NY.GDP.MKTP.CD http://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD GDP notes GDP total in current prices GDP unit GDPYear composite index measuring average achievement in three basic dimensions of human development-a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html 2010-11-04 UNDP - HDRO UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html http://hdrstats.undp.org/en/indicators/49806.html http://hdrstats.undp.org/en/indicators/49806.html http://hdrstats.undp.org/es/indicadores/49806.html http://hdrstats.undp.org/fr/indicateurs/49806.html agricultural area 2010-07-21 Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for “Arable land” are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under "forest"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx FAOSTAT FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor agricultural area notes agriculturalAreaTotal agricultural area unit agriculturalAreaYear codeAGROVOC AGROVOC AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub http://aims.fao.org/ar/website/Search-AGROVOC/sub http://aims.fao.org/website/Search-AGROVOC/sub http://aims.fao.org/es/website/Search-AGROVOC/sub http://aims.fao.org/fr/website/Search-AGROVOC/sub http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub codeCurrency 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ codeDBPediaID 2010-04-28 DBpedia DBpedia http://dbpedia.org/About http://dbpedia.org/About codeFAOSTAT FAOSTAT FAOSTAT http://faostat.fao.org http://faostat.fao.org http://faostat.fao.org/default.aspx?lang=es http://faostat.fao.org/default.aspx?lang=fr codeFAOTERM 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ codeGAUL 2008-12-10 Global Administrative Unit Layers Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691 http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691 codeISO2 ISO 3166-1 ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm codeISO3 2010-04-01 United Nations Statistics Division United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm http://unstats.un.org/unsd/methods/m49/m49alpha.htm http://unstats.un.org/unsd/methods/m49/m49alphaf.htm codeUN 2010-04-01 United Nations Statistics Division United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm http://unstats.un.org/unsd/methods/m49/m49alpha.htm http://unstats.un.org/unsd/methods/m49/m49alphaf.htm codeUNDP countryArea 2011-07-21 Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx FAOSTAT FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor country area notes total country area country area unit countryAreaYear has code has coordinate has currency has list name has maximum latitude has maximum longitude has minimum latitude has minimum longitude has nationality has official name has short name has statistics land area 2011-07-21 FAOSTAT FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor land area notes total land area land area unit landAreaYear nameCurrencyAR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameCurrencyEN 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameCurrencyES 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameCurrencyFR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameCurrencyIT 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameCurrencyRU 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameCurrencyZH 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameListAR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameListEN 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameListES 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameListFR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameListIT 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameListRU 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameListZH 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameOfficialAR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameOfficialEN 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameOfficialES 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameOfficialFR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameOfficialIT 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameOfficialRU 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameOfficialZH 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameShortAR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameShortEN 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameShortES 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameShortFR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameShortIT 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameShortRU 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nameShortZH 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nationalityAR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nationalityEN 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nationalityES 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nationalityFR 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nationalityIT 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nationalityRU 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ nationalityZH 2010-06-24 FAO terminology FAO terminology http://www.fao.org/termportal/en/ http://www.fao.org/termportal/en/ http://www.fao.org/termportal/contr/ar/ http://www.fao.org/termportal/contr/en/ http://www.fao.org/termportal/contr/es/ http://www.fao.org/termportal/contr/fr/ http://www.fao.org/termportal/contr/zh/ population 2009-09-21 FAOSTAT FAOSTAT http://faostat.fao.org/site/550/default.aspx The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor population notes total population population unit populationYear valid since The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before. valid until The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999. is template The document can be used as a template for the creation of other documents. user-defined tag A free text field for recording topics which relate to the resource. patient ID health care provider ID Measurement Label inventory number An example inventory number can be in the form: 12345 Inventory identifier for the resource. PERSON: Melissa Haendel PERSON: Melissa Haendel has inventory number has restriction A restriction on service availability, such as university or consortium affiliation, geographical location, professional certification, or other factors. PERSON: Melissa Haendel PERSON: Melissa Haendel Resource is only available to researchers in the department. has restriction has geographic restriction Any service limitation tied to geographically-defined areas such as metro areas, counties, states, or regions. PERSON: Melissa Haendel PERSON: Melissa Haendel Resource is only available to researchers in Boston area. has geographic restriction model number ABI 9000 Instrument model number, which may be a name, number, or both. PERSON: Melissa Haendel PERSON: Melissa Haendel model number lab data format Current method or software used to inventory a lab's resources. Examples include Excel, index cards, FileMaker, 3-ring binder, etc. Excel spreadsheet PERSON: Melissa Haendel PERSON: Melissa Haendel lab data format version PERSON: Melissa Haendel PERSON: Melissa Haendel Software edition, typically a numeral followed by a decimal and another numeral, such as 2.1. v 1.0 has study population African american study population. Characteristics of the human population being studied. May include number, demographic or geographic information, inclusion or exclusion criteria, or other descriptive information. PERSON: Melissa Haendel PERSON: Melissa Haendel study population has eligibility requirement A grade point average above 3.5 is an eligibility requirement. PERSON: Melissa Haendel PERSON: Melissa Haendel Requirements for research opportunity eligibility. Requirements include: coursework, minimum gradepoint average, state residency, under-represented group status, field of study, or matriculation status. has eligibility requirement abstract http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html http://purl.org/dc/terms/ stable A summary of the resource. Amazon Standard Identification Number (ASIN) 020530902X Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number. http://purl.org/ontology/bibo/ Amazon Standard Identification Number stable chapter number http://purl.org/ontology/bibo/ An chapter number unstable coden CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues. Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN http://purl.org/ontology/bibo/ An identifier of serials, still in use by libraries, but replaced by ISSN for any new work stable Digital Object Identifier (DOI) http://purl.org/ontology/bibo/ stable Digital Object Identifier EAN International-Uniform Code Council (EAN-UCC) 13 Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council. The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US. http://purl.org/ontology/bibo/ European Article Number/Uniform Commercier Code 13 stable edition http://purl.org/ontology/bibo/ stable The name defining a special edition of a document. Normally its a literal value composed of a version number and words. Electronic International Standard Serial Number (EISSN) eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN http://purl.org/ontology/bibo/ The electronic ISSN number of a periodical. stable Global Trade Item Number (GTIN-14) http://en.wikipedia.org/wiki/Global_Trade_Item_Number. http://purl.org/ontology/bibo/ stable Global Trade Item Number 14 identifier International Standard Book Number (ISBN) 10 http://en.wikipedia.org/wiki/Isbn. International Standard Book Number (ISBN) 13 source: http://en.wikipedia.org/wiki/Isbn. International Standard Serial Number (ISSN) http://purl.org/ontology/bibo/ source: http://en.wikipedia.org/wiki/Issn stable International Standard Serial Number issue Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number "4" Something that is printed or published and distributed, esp. a given number of a periodical. Library of Congress Control Number (LCCN) Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number. http://purl.org/ontology/bibo/ stable Library of Congress Control Number locator definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html http://purl.org/ontology/bibo/ A description (often numeric) that locates an item within a containing document or collection. stable number of pages number Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html Online Computer Library Center (OCLC) number http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/. bibo has the domain of this property set to the union of Collection and Document. http://purl.org/ontology/bibo/ OCLC Identifier stable end page http://purl.org/ontology/bibo/ stable Ending page number within a continuous page range. start page http://purl.org/ontology/bibo/ stable Starting page number within a continuous page range. PubMed ID The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind. http://purl.org/ontology/bibo/ PubMed Identifier stable name prefix Mr; Ms; Mrs http://dictionary.reference.com/browse/prefix http://purl.org/ontology/bibo/ The prefix of a name stable section http://purl.org/ontology/bibo/ An section number unstable Di Rado, Alicia. 1995. Trekking through college: Classes explore modern society using the world of Star trek. Los Angeles Times, March 15, sec. A, p. 3. short description http://purl.org/ontology/bibo/ A short description of the resource. unstable The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry. Serial Item and Contribution Identifier (SICI) A sub property of identifier (http://en.wikipedia.org/wiki/SICI). http://purl.org/ontology/bibo/ stable Serial Item and Contribution Identifier Universal Product Code (UPC) http://purl.org/ontology/bibo/ source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code. stable Universal Product Code URI Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html volume has global count date The date on which the global citation count of the cited entity was recorded from a named bibliographic information source. has global count value An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date. An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date. preferred namespace URI abbreviation A short form for an longer title or name. B.A. published US Classification Class/subclass (CCL) code contact information credits date/time department or school name within institution Not intended to be an institution name. description eRA Commons ID entry term keywords conservation use one freetextKeyword assertion for each keyword or phrase. one keyword or phrase per freetextKeyword assertion direct costs has monetary amount has value hide from display HR job title Definition http://en.wikipedia.org/wiki/Job_title#Job_title. administrative secretary International Classification (ICL) code The International classification(s) to which the published application has been assigned. identifier Is this person a corresponding author? True; False license number local award ID core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI major field of degree Information Science; Computer Science; Anthropology middle name or initial NIH Manuscript Submission System ID outreach overview My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production. Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities overview My research focuses on diseases of pine crops in the southeastern United States. Short text for presentation describing the agent's purpose, activities, and/or accomplishments. patent number source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp . place of publication PubMed Central ID A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission. preferred display order rank this number indicates a position in a list report identifier research overview Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities ISI Researcher ID RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile. Definition source: http://isiwebofknowledge.com/researcherid/ ROR ID The ROR ID is a unique identifier for organizations in the Research Organization Registry (ROR), which is a global, community-led registry of open persistent identifiers for research organizations. Definition source: https://ror.org/about/ Scopus ID Home page for Scopus: http://www.scopus.com/home.url seating capacity 55 definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity). sponsor award ID Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public. See also core:localAwardId. supplemental information teaching overview Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the "teaches" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses term label term type total award amount Institutional Review Board (IRB) number Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. National Clinical Trials (NCT) number ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials NCT00000419 study population count number of human participants in the study (trial). additional name anniversary The date of marriage, or equivalent, of the object the vCard represents birthdate To specify the birth date of the object the vCard represents calendar busy calendar link calendar request category country email has last name Called Family Name in vCard has formatted name gender To specify the components of the sex and gender identity of the object the vCard represents. To enable other Gender/Sex codes to be used, this dataproperty has range URI. The vCard gender code classes are defined under Code/Gender geo Must use the geo URI scheme RFC5870 first name called Given Name invCard honorific prefix Called Honorific Prefix in vCard honorific suffix instant message key has language Use 2 char language code from RFC5646 locality logo nickname note organization name organizational unit name photo postal code product ID region related revision role sort as sound source street address Telephone timezone title uid To specify a value that represents a globally unique identifier corresponding to the entity associated with the vCard URL Area 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 Disputed Economic Region Transnational Region United Nations statistics department http://unstats.un.org/unsd/methods/m49/m49regin.htm Group Non Self Governing 1 1 UN Cartographic Section, Department of Field Support http://www.un.org/Depts/Cartographic/map/profile/world00.pdf Organization Other Self Governing United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm Special Group Territory 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 Topic Weight Measurement Expertise Measurement Topic Weight Measurement Process Expertise Measurement Process Experience specialty Contact Qualifier Examples are business address, shipping address. The purpose of contact information. Contact qualifiers are represented as individuals of this class. We do not have an authoritative controlled vocabulary for contact qualifiers. PERSON: Michael Conlon FOAF Profile Contact Entity Continuant Occurrent Independent Continuant Spatial Region Temporal Region Process Disposition Realizable Entity (forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] (forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002]) RealizableEntity To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002]) realizable the disposition of this piece of metal to conduct electricity. the disposition of your blood to coagulate the function of your reproductive organs the role of being a doctor the role of this boundary to delineate where Utah and Colorado meet Quality Specifically Dependent Continuant Role A person's, group's or organization's role in an endeavor Only use if no specific subclasses of core:Role describe the role. Only use this broad role class if no subclasses of role describe the item being classified. Site Generically Dependent Continuant Function One-Dimensional Temporal Region Material Entity Immaterial Entity Zero-Dimensional Temporal Region Instrument A flow cytometer. Material entity that is designed to have a function and play a role in scientific investigation. PERSON: Melissa Haendel See OBI listserv discussion for considerations in defining instrument. http://sourceforge.net/tracker/index.php?func=detail&aid=2894801&group_id=177891&atid=886178 http://en.wikipedia.org/wiki/Scientific_instrument instrument Service A DNA sequencing service performed by a core lab. An information content entity that describes a service performed by a person or organization with the objective of performing a technique, providing training, providing storage of data or material entities, or providing access to resources for another person or organization Coordinate with NIF. NIF ID: nlx_res_20090105 PERSON: Melissa Haendel PERSON: Melissa Haendel service Reagent A plasmid can be used as a reagent. PERSON: Melissa Haendel Placeholder for class to be imported from the Reagent Ontology (ReO). Processed material that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances. http://www.yourdictionary.com/reagent reagent Technique A technique is a planned process used to accomplish a specific activity or task. Flow cytometry is a technique. PERSON: Melissa Haendel Protocol is added to eagle-i temporarily until a relationship between the informatio entity "protocol" and these planned processes is created. This class refers to the axtual process not the document http://en.wikipedia.org/wiki/Technique Service Provider Role A role inhering in a person or organization that is realized when the bearer participates in providing a service to meet the need of another person or thing. A technician in a core laboratory. An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession. Member of the International Conference on Complex Systems Organizing Committee PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky Research Project A funded collection of investigations as described in a research proposal. A project to study the role of a specific protein in cell signaling. Maybe SameAs "Investigation" but is the subject of funding PERSON: Melissa Haendel PERSON: Melissa Haendel Human Study A clinical trial. OCRe PERSON: Melissa Haendel Research project that uses or collects measurements or assessments about humans. This should be imported from OCRE- but they currently have no generic human study type. Def is modified. human study Clinical Trial A clinical trial to evaluate the efficacy of a new drug. An interventional study that contains a set of procedures in medical research and drug development that are conducted to allow safety (or more specifically, information about adverse drug reactions and adverse effects of other treatments) and efficacy data to be collected for health interventions (e.g., drugs, diagnostics, devices, therapy protocols) that is performed over phases. PERSON: Nicole Vasilevsky http://en.wikipedia.org/wiki/Clinical_trial Biological Specimen Heart tissue obtained from an organism. Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, a population of organisms, or is a part of or derived from an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype. PERSON: Melissa Haendel Should have relationship to Organism biological specimen biospecimen http://en.wikipedia.org/wiki/Specimen Software A general term primarily used for digitally stored data such as computer programs and other kinds of information read and written by computers. Aligned with SWO which also defines software and other types of services as subtypes of Information content entity. Microsoft Word is commonly used word processing software. PERSON: Melissa Haendel http://en.wikipedia.org/wiki/Computer_software software SWHID Home page for SoftWare Heritage persistent IDentifiers : https://docs.softwareheritage.org/devel/swh-model/persistent-identifiers.html The SoftWare Heritage persistent IDentifier, or SWHID for short, is a PID for software artifacts. It guarantees to remain stable (persistent) over time. Funding Role A role inhering in a person or organization that is realized when the bearer participates in providing funding to a person or an organization for academic or business purposes. PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky The NIH is a funding agency. Educator Role A role inhering in a person or organization that is realized when the bearer participates in providing education to a student or group of students. A teacher. PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky Access Service A service offering that describes a service in which the consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service. Allowing access to a microscope in a core lab. Coordinate with NIF PERSON: Matt Brush PERSON: Matthew Brush Storage Service A computer server. A service offering that describes a service in which the consumer provides some material or data as input which a service provider stores and returns as output. PERSON: Matt Brush PERSON: Matthew Brush coordinate with NIF. NIF ID:nlx_res_20090419 Training Service A service offering that describes a service in which the provider offers educational materials or events, such as courses, workshops or graduate programs, to the service consumer Coordinate with NIF. NIF ID: nlx_res_20090444 PERSON: Matt Brush PERSON: Matthew Brush Training a researcher to use a microscope. Material Processing Service A service offering that describes a service in which the provider makes physical changes to a specified input material entity with the objective of producing a new material entity form input materials, or modifying the input material entity, and returning this as output to the service consumer Biopsy service. Coordinate with NIF: NIF ID: nlx_res_20090416 PERSON: Nicole Vasilevsky http://neurolex.org/wiki/Category:Production_service_resource Material Analysis Service An analysis service offering that describes a service in which the consumer provides some input material and a service provider performs some analysis of this material to generate data that is returned to the service consumer. Coordinate with NIF: NIF ID: nlx_res_20090420 Flow cytometry analysis of T cells. PERSON: Nicole Vasilevsky http://neurolex.org/wiki/Category:Analysis_service_resource Material Production Service A material processing service offering that describes a service in which the provider makes physical changes to a specified input material that produce a new entity as specified output that is returned the service consumer. The specified output of a material production service can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials. Coordinate with NIF. NIF ID: nlx_res_20090418 PERSON: Matthew Brush Production of monoclonal antibodies from a hybridoma. http://neurolex.org/wiki/Category:Material_service_resource Technology Transfer Office An organization that provides services for commercialization and licensing of technologies at an institution. PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky Technology Transfer Office Research Opportunity A planned process carried out by a person or organization with the objective of performing research. An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky Training grant to perform post-doctoral research. student research opportunity US Resident Role A role that inheres in a person who maintains residency in the United states. PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky US Citizen Role A US resident role that inheres in an individual that is a legally recognized as a member of a state, with associated rights and obligations. PERSON: Nicole Vasilevsky http://en.wiktionary.org/wiki/citizen Non-US Citizen A US resident role that inheres in an individual who is not a legally recognized subject or national of the United States. PERSON: Nicole Vasilevsky https://www.google.com/search?q=residency+status&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=Bcx&rls=org.mozilla:en-US:official&q=citizen&tbs=dfn:1&tbo=u&sa=X&ei=micXT_DwMIjUiAK15tDUDw&ved=0CCgQkQ4&bav=on.2,or.r_gc.r_pw.,cf.osb&fp=7b67128a22f602af&biw=1609&bih=794 Permanent Resident Role An role that inheres in an individual who is not a citizen but who legally resides in another nation on a permanent or extended basis. PERSON: Nicole Vasilevsky http://connection.ebscohost.com/us/immigration-restrictions/overview-legal-and-illegal-immigration Non-Permanent Resident Role A non-US citizen role that inheres in an individual who is residing in a country, but is neither a citizen nor a permanent resident. PERSON: Nicole Vasilevsky http://www.irs.gov/taxtopics/tc851.html Student Role A college student. A role inhering in a person that is realized when the bearer participates a course of study, as in a school, college, university, etc. PERSON: Nicole Vasilevsky http://www.thefreedictionary.com/student Undergraduate Student Role A college student. A student role inhering in a person that is realized when the bearer participates in a course of study at a college, university, etc. in pursuit of an associate or bachelor degree. PERSON: Nicole Vasilevsky http://www.thefreedictionary.com/student Graduate Student Role A PhD student at a university. A student role inhering in a person that is realized when the bearer participates a course of study at a university or institution in pursuit of an graduate or professional degree. PERSON: Nicole Vasilevsky http://www.thefreedictionary.com/student High School Student Role A freshman in high school. A student role inhering in a person that is realized when the bearer participates in a course of study at a secondary learning institution. PERSON: Nicole Vasilevsky http://www.thefreedictionary.com/student Employee Role A role inhering in a person that is realized when the bearer participates in an occupation by which a person earns a living or spends their time. An employee at a university. PERSON: Nicole Vasilevsky http://dictionary.reference.com/browse/employment Faculty Role A professor at a university. An employee role inhering in a person that is realized when the bearer participates in the teaching and/or administrative force of a university, college, or school. PERSON: Nicole Vasilevsky http://dictionary.reference.com/browse/faculty Staff Role A research technician in a lab. An employee role inhering in a person that is realized when the bearer is employed by an employer. PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky Post-Baccalaureate Trainee A student role inhering in a person that is realized when the bearer participates in a post-baccalaureate training program in pursuit of an additional bachelor degree or new or additional training in a particular field. PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky Post-Graduate Student Trainee Role A post-doctoral fellow. A student role inhering in a person that is realized when the bearer participates in a post-graduate training program in pursuit of new or additional training in a particular field, such as a post-doctoral fellowship. PERSON: Nicole Vasilevsky PERSON: Nicole Vasilevsky Licensing A technique that authorizes a use (such as copying software or using a (patented) invention) to a licensee, sparing the licensee from a claim of infringement brought by the licensor. Licensing of a new technology. PERSON: Nicole Vasilevsky http://en.wikipedia.org/wiki/License Transport Service A service offering that describes a service in which the provider facilitates the transport of some material entity to a specified destination for the service consumer. PERSON: Matt Brush PERSON: Matthew Brush Transport of a patient within a hospital. Support Service A service offering that describes a service in which the provider assists the consumer in activities directly or indirectly associated with the production and analysis or experimental research data. PERSON: Matt Brush PERSON: Matthew Brush Technical support. Material Storage Service A storage service offering that describes a service in which the consumer provides some material as input which a service provider stores and returns as output Cryopreservation service. PERSON: Matt Brush PERSON: Matthew Brush Data Storage Service A storage service offering that describes a service in which the consumer provides data as input, which a service provider stores and returns as output in its original form. PERSON: Matt Brush PERSON: Matthew Brush Storing data on a server. Maintenance Service A service offering that describes a service in which the provider actively maintains a material or data resource (e.g. a model organism colony or database) for the service consumer. This may involved making physical alterations to the material or data with the goal of maintaining its integrity or features. PERSON: Matt Brush PERSON: Matthew Brush Material Maintenance Service A maintenance service offering that describes a service in which the provider actively maintains a material resource (e.g. a model organism colony) for the service consumer. A material maintenance service may or may not include storage of the material input. Maintaining an animal coloy. PERSON: Matt Brush PERSON: Matthew Brush Data Maintenance Service A maintenance service offering that describes a service in which the provider actively manages or maintains data or a database for the service consumer. Maintenance of the data is performed to maintain its integrity or enhance its quality or utility for the consumer, but new data is not generated as a result of the maintenance. Maintaining a database. PERSON: Matt Brush PERSON: Matthew Brush Analysis Service A service offering that describes a service in which the consumer provides some input material or data and a service provider returns data about the input material or data. Flow cytometry analysis service. PERSON: Matt Brush PERSON: Matthew Brush Data Analysis Service An analysis service offering that describes a service in which the consumer provides some input data and a service provider transforms, models, or interprets the input data and returns this generated data as output PERSON: Matt Brush PERSON: Matthew Brush Sequence data analysis. data processing service data transformation service Material Modification Service A material processing service offering that describes a service in which the provider makes physical modifications to a specified input material, such that at least one of the specified outputs of this process is a modified version of a specified input material. Histology service. PERSON: Matt Brush PERSON: Matthew Brush Database A database is an organized collection of data, today typically in digital form. Just a place horder. It will probably be replaced by NIF term: http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Resource.owl#nlx_res_20090405 PERSON: Carlo Torniai http://en.wikipedia.org/wiki/Database Measurement Unit Label 2009-03-16: provenance: a term measurement unit was proposed for OBI (OBI_0000176) , edited by Chris Stoeckert and Cristian Cocos, and subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definition of this, different, term. 2009-03-16: review of this term done during during the OBI workshop winter 2009 and the current definition was considered acceptable for use in OBI. If there is a need to modify this definition please notify OBI. A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure. Examples of measurement unit labels are liters, inches, weight per volume. PERSON: Alan Ruttenberg PERSON: Melanie Courtot measurement unit label Objective Specification Answers the question, why did you do this experiment? OBI Plan and Planned Process/Roles Branch OBI_0000217 PERSON: Alan Ruttenberg PERSON: Barry Smith PERSON: Bjoern Peters PERSON: Jennifer Fostel a directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved. objective specification purpose of a study; support of hypothesis, discovery of new information Action Specification Alan Ruttenberg OBI Plan and Planned Process branch Pour the contents of flask 1 into flask 2 a directive information entity that describes an action the bearer will take Datum Label A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label GROUP: IAO datum label http://www.golovchenko.org/cgi-bin/wnsearch?q=label#4n Journal Article Examples are articles published in the journals, Nature and Science. The content can often be cited by reference to a paper based encoding, e.g. Authors, Title of article, Journal name, date or year of publication, volume and page number. OBI_0000159 a report that is published in a journal group:OBI journal article person:Alan Ruttenberg person:Chris Stoeckert Data Item 2/2/2009 Alan and Bjoern discussing FACS run output data. This is a data item because it is about the cell population. Each element records an event and is typically further composed a set of measurment data items that record the fluorescent intensity stimulated by one of the lasers. 2009-03-16: data item deliberatly ambiguous: we merged data set and datum to be one entity, not knowing how to define singular versus plural. So data item is more general than datum. 2009-03-16: removed datum as alternative term as datum specifically refers to singular form, and is thus not an exact synonym. Data items include counts of things, analyte concentrations, and statistical summaries. JAR: datum -- well, this will be very tricky to define, but maybe some information-like stuff that might be put into a computer and that is meant, by someone, to denote and/or to be interpreted by some process... I would include lists, tables, sentences... I think I might defer to Barry, or to Brian Cantwell Smith JAR: A data item is an approximately justified approximately true approximate belief PERSON: Alan Ruttenberg PERSON: Chris Stoeckert PERSON: Jonathan Rees a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements. data data item Information Content Entity The most general classification of an information resource Examples of information content entites include journal articles, data, graphical layouts, and graphs. OBI_0000142 PERSON: Chris Stoeckert an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity information content entity information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907). Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity. Scalar Measurement Datum 10 feet. 3 ml. 2009-03-16: we decided to keep datum singular in scalar measurement datum, as in this case we explicitly refer to the singular form PERSON: Alan Ruttenberg PERSON: Melanie Courtot Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them. a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label. Directive Information Entity 8/6/2009 Alan Ruttenberg: Changed label from "information entity about a realizable" after discussions at ICBO An information content entity whose concretizations indicate to their bearer how to realize them in a process. PERSON: Alan Ruttenberg PERSON: Bjoern Peters Werner pushed back on calling it realizable information entity as it isn't realizable. However this name isn't right either. An example would be a recipe. The realizable entity would be a plan, but the information entity isn't about the plan, it, once concretized, *is* the plan. -Alan Data about an Ontology Part Person:Alan Ruttenberg data about an ontology part is a data item about a part of an ontology, for example a term Plan Specification 2009-03-16: provenance: a term a plan was proposed for OBI (OBI_0000344) , edited by the PlanAndPlannedProcess branch. Original definition was " a plan is a specification of a process that is realized by an actor to achieve the objective specified as part of the plan". It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term. Alan Ruttenberg Alternative previous definition: a plan is a set of instructions that specify how an objective should be achieved OBI Plan and Planned Process branch OBI_0000344 PMID: 18323827.Nat Med. 2008 Mar;14(3):226.New plan proposed to help resolve conflicting medical advice. a directive information entity that when concretized it is realized in a process in which the bearer tries to achieve the objectives, in part by taking the actions specified. Plan specifications includes parts such as objective specification, action specifications and conditional specifications. plan specification Measurement Datum 2/2/2009 is_specified_output of some assay? A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device. Examples of measurement data are the recoding of the weight of a mouse as {40,mass,"grams"}, the recording of an observation of the behavior of the mouse {,process,"agitated"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}. OBI_0000305 group:OBI measurement datum person:Chris Stoeckert Conclusion Textual Entity 2009/09/28 Alan Ruttenberg. Fucoidan-use-case 2009/10/23 Alan Ruttenberg: We need to work on the definition still A textual entity that expresses the results of reasoning about a problem, for instance as typically found towards the end of scientific papers. Person:Alan Ruttenberg conclusion textual entity that fucoidan has a small statistically significant effect on AT3 level but no useful clinical effect as in-vivo anticoagulant, a paraphrase of part of the last paragraph of the discussion section of the paper 'Pilot clinical study to evaluate the anticoagulant activity of fucoidan', by Lowenthal et. al.PMID:19696660 Textual Entity A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc. AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc. MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities. PERSON: Lawrence Hunter Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities text textual entity Planned Process 'Plan' includes a future direction sense. That can be problematic if plans are changed during their execution. There are however implicit contingencies for protocols that an agent has in his mind that can be considered part of the plan, even if the agent didn't have them in mind before. Therefore, a planned process can diverge from what the agent would have said the plan was before executing it, by adjusting to problems encountered during execution (e.g. choosing another reagent with equivalent properties, if the originally planned one has run out.) Bjoern Peters Injecting mice with a vaccine in order to test its efficacy branch derived planned process A processual entity that realizes a plan which is the concretization of a plan specification. planned process Regulatory Role GROUP: Role branch OBI, CDISC Regulatory agency, Ethics committee, Approval letter; example: Browse these EPA Regulatory Role subtopics http://www.epa.gov/ebtpages/enviregulatoryrole.html Feb 29, 2008 a role which inheres in material entities and is realized in the processes of making, enforcing or being defined by legislation or orders issued by a governmental body. regulatory role Protocol OBI branch derived + wikipedia (http://en.wikipedia.org/wiki/Protocol_%28natural_sciences%29) PMID: 18388943.Nat Protoc. 2008;3(4):612-8.Protocol for the induction of arthritis in C57BL/6 mice. PlanAndPlannedProcess Branch Protocol a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process. protocol Manufacturer A person or organization that has a manufacturer role Rate Measurement Datum Organism GROUP: OBI Biomaterial Branch A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs. WEB: http://en.wikipedia.org/wiki/Organism animal fungus organism plant virus Study Design A study design is a plan specification comprised of protocols (which may specify how and what kinds of data will be gathered) that are executed as part of an investigation and is realized during a study design execution. study design Rate Unit Event Only use if no specific subclasses of event:Event are appropriate. Something that happens at a given place and time. This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series. The previous short definition was: "An arbitrary classification of a space/time region, by a cognitive agent." Phase Phase describes the level of a trial required of drugs before (and after) they are routinely used in clinical practice: - Phase I trials assess toxic effects on humans (not many people participate in them, and usually without controls); - Phase ll trials assess therapeutic benefit (usually involving a few hundred people, usually with controls, but not always); - Phase III trials compare the new treatment against standard (or placebo) treatment (usually a full randomised controlled trial). At this point, a drug can be approved for community use. - Phase IV monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration] A trial can be of a combination phase (e.g., I/II). The concept of phase is not applicable to trials studying certain interventions (e.g., device, procedure, behavioral) Simona Phase 0 A Phase 0 trial is an exploratory trial involving very limited human exposure, with no therapeutic or diagnostic intent (e.g., screening study, microdose study). [http://prsinfo.clinicaltrials.gov/definitions.html] Simona Phase 1 A Phase I trial assesses toxic effects on humans (not many people participate, and usually without controls) [Glossary of Terms in The Cochrane Collaboration] Simona Phase 2 A Phase ll trial assesses therapeutic benefit (usually involving a few hundred people, usually with controls, but not always) [Glossary of Terms in The Cochrane Collaboration] Simona Phase 3 A Phase III trial compares the new treatment against standard (or placebo) treatment (usually a full randomised controlled trial). At this point, a drug can be approved for community use. [Glossary of Terms in The Cochrane Collaboration] Simona Phase 4 A Phase IV study monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration] Simona Single Group Study A single group study is an interventional study that has only a single allocation group and no contemporaneuos comparison group. A study in which an individual acts has his/her own comparison does not fall into this category, since an individual is not a group. Simona Simona: to be reviewed Academic Article A specific academic journal article Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography http://purl.org/ontology/bibo/ stable A scholarly academic article, typically published in a journal. Article A specific journal article A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book Short Definition modified from the bibo ontology. http://purl.org/ontology/bibo/ stable A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine. Audio Document Recorded audio in any format http://purl.org/ontology/bibo/ phonograph record; tape; CD; DVD; DAT stable An audio document; aka record. Audio-Visual Document Audiovisual recording in any format film; video; Blu-ray http://purl.org/ontology/bibo/ An audio-visual document; film, video, and so forth. stable Bill Draft legislation presented for discussion to a legal body Short Definition from the bibo ontology http://purl.org/ontology/bibo/ Draft legislation presented for discussion to a legal body. stable Book A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers Short Definition copied from bibo ontology http://purl.org/ontology/bibo/ stable A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers. Book Section A section of a book Short Definition from the bibo ontology http://purl.org/ontology/bibo/ unstable A section of a book. Brief A document stating the facts and points of law of a client's case http://purl.org/ontology/bibo/ A written argument submitted to a court. unstable Chapter A main division of a book http://purl.org/ontology/bibo/ A chapter of a book. unstable Code A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies Code of Federal Regulations Short Definition from OCLC Input Standards, EntW http://purl.org/ontology/bibo/ stable A collection of statutes. Collected Document Short Definition is the Medical Subject Heading (MeSH) definition Work consisting of collections of previously published works http://purl.org/ontology/bibo/ stable A document that simultaneously contains other documents. Collection Collection of information resources that have a unified identity Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license. Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection http://purl.org/ontology/bibo/ A collection of Documents or Collections stable Conference 2010 International Congress on Autoimmunity; American Libraries Association 2009 A meeting for consultation or discussion. core:Seminar and bibo:Conference are very similar. http://purl.org/ontology/bibo/ stable A meeting for consultation or discussion. Court Reporter Collection of legal cases Supreme Court Reporter http://purl.org/ontology/bibo/ A collection of legal cases. stable Document A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate Short Definition from the bibo ontology http://purl.org/ontology/bibo/ A collection of information content entities intended to be understood together as a whole A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information. A journal article, patent application, laboratory notebook, or a book PERSON: Lawrence Hunter document Document Part A distinct part of a larger document or collected document Short Definition from the bibo ontology http://purl.org/ontology/bibo/ a distinct part of a larger document or collected document. unstable Document Status The status of a document with respect to its publication. The status of a document with respect to its publication. The statuses are represented as individuals of this class. Use the "show all individuals of this class" button on the class control panel to see the currently defined statuses. http://purl.org/ontology/bibo/ submitted; accepted; in-press; published; invited; refereed. The status of the publication of a document. stable Edited Book An edited collection of stand-alone articles published as a book Best American Science Writing 2009 http://purl.org/ontology/bibo/ An edited book. stable Excerpt A passage selected from a larger work Short Definition from the bibo ontology http://purl.org/ontology/bibo/ A passage selected from a larger work. stable Film Audiovisual recording in film format http://purl.org/ontology/bibo/ aka movie. stable Hearing An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit. Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html http://purl.org/ontology/bibo/ An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit. stable Image A visual representation such as a photograph or graph http://purl.org/ontology/bibo/ photograph; diagram stable A document that presents visual or diagrammatic information. Interview A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee. http://purl.org/ontology/bibo/ radio or newspaper interview stable A formalized discussion between two or more people. Issue Short Definition from the bibo ontology http://purl.org/ontology/bibo/ something that is printed or published and distributed, esp. a given number of a periodical something that is printed or published and distributed, esp. a given number of a periodical stable Journal Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science. Contains original scholarly research or review articles by experts in the field Journal of Information Science; IEEE Intelligent System; Scientometrics http://purl.org/ontology/bibo/ stable A periodical of scholarly journal Articles. Legal Case Document Official court papers for a case http://purl.org/ontology/bibo/ unstable A document accompanying a legal case. Decision The written determination of a case, motion or claim by a court or tribunal http://purl.org/ontology/bibo/ unstable A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law. Legal Document a document that states some contractual relationship or grants some right http://purl.org/ontology/bibo/ stable A legal document; for example, a court decision, a brief, and so forth. Legislation Enactments of legislative bodies, published in either statute or code form From OCLC Input Standards, EntW http://purl.org/ontology/bibo/ unstable A legal document proposing or enacting a law or a group of laws. Letter A written or printed communication addressed to a person or organization and usually transmitted by mail A written or printed communication addressed to a person or organization and usually transmitted by mail Magazine Abstracts and bibliographies are usually not included in magazines. Contains articles of current events or general interest, geared to the reading public as being informative or recreational New Yorker http://purl.org/ontology/bibo/ A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports. stable Manual A book of instructions or guide to a specific topic SDB User Manual http://purl.org/ontology/bibo/ A small reference book, especially one giving instructions. unstable manuscript Short Definition is the Medical Subject Heading (MeSH) definition Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies http://purl.org/ontology/bibo/ An unpublished Document, which may also be submitted to a publisher for publication. stable Map A graphical depiction of geographic features, scientific discipline, scientific data analytical results The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps. http://purl.org/ontology/bibo/ A graphical depiction of geographic features. unstable Newspaper Contains news articles, opinions, features, advertising, and is usually issued daily or weekly USA Today http://purl.org/ontology/bibo/ stable A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising. Note Notes or annotations about a resource Short Definition from bibo ontology http://purl.org/ontology/bibo/ stable Notes or annotations about a resource. Patent (from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/) http://purl.org/ontology/bibo/ A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years. stable Performance Something carried out, acted or rendered. http://purl.org/ontology/bibo/ unstable A public performance. Periodical http://purl.org/ontology/bibo/ stable A group of related documents issued at regular intervals. Personal Communication Document A personal communication manifested in some document. A personal communication manifested in some document. Proceedings A compilation of documents published from an event, such as a conference Short Definition copied from bibo ontology http://purl.org/ontology/bibo/ unstable A compilation of documents published from an event, such as a conference. Quote An excerpted collection of words Short Definition from the bibo ontology http://purl.org/ontology/bibo/ An excerpted collection of words. stable Reference Source A document that presents authoritative reference information, such as a dictionary or encylopedia Short Definition from the bibo ontology http://purl.org/ontology/bibo/ unstable A document that presents authoritative reference information, such as a dictionary or encylopedia . Report A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc. Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles. http://purl.org/ontology/bibo/ A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.. stable Series A thematic collection of documents, usually books, issued at regular or irregular intervals Methods in Molecular Biology http://purl.org/ontology/bibo/ A loose, thematic, collection of Documents, often Books. stable Slide A slide in a slideshow Short Definition from the bibo ontology http://purl.org/ontology/bibo/ A slide in a slideshow unstable Slideshow A presentation of a series of slides, usually presented in front of an audience with written text and images Short Definition from the bibo ontology http://purl.org/ontology/bibo/ A presentation of a series of slides, usually presented in front of an audience with written text and images. stable Standard A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry Short Definition from OCLC Input Standards, EntW http://purl.org/ontology/bibo/ stable A document describing a standard Statute A bill enacted into law Short Definition from bibo ontology http://purl.org/ontology/bibo/ A bill enacted into law. stable Thesis Short Definition from OCLC Input Standards, EntW Works created to satisfy the requirements for an academic certification or degree; also called dissertation http://purl.org/ontology/bibo/ A document created to summarize research findings associated with the completion of an academic degree. stable Thesis Degree Different from general academic degree, thesis degree is achieved through one's completed thesis. Thesis is a document submitted in support of candidature for a degree or professional qualification presenting the author's research and findings(http://en.wikipedia.org/wiki/Thesis_or_dissertation). Doctor of Philosophy (Ph.D.) The academic degree of a Thesis. http://purl.org/ontology/bibo/ stable The academic degree of a Thesis Webpage One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web http://purl.org/ontology/bibo/ unstable A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print. Website A group of webpages available within a specific parent address or URL on the World Wide Web Facebook; VIVOweb.org; Flickr http://purl.org/ontology/bibo/ unstable A group of Webpages accessible on the Web. Workshop Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc. http://purl.org/ontology/bibo/ A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc. stable Bibliographic Information Source A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus. A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus. Global Citation Count The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date. The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date. Clinical Guideline A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work. Comment A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program. has super-classes Erratum A formal correction to an error introduced by the publisher into a previously published document. Abstract An abstract that is published as a standalone document or in a journal of abstracts Academic Degree 1 B.A. Bachelor of Arts An academic degree at any level, both as reported by individuals for employment and as offered by academic degree programs. The ObjectProperty relates is used to associate an AcademicDegree with an AwardedDegree. A preferred approach would be to recognize the AwardedDegree as an information artifact which is the output of an AcademicDegree process. This would eliminate the use of relates and relatedBy in the representation of Academic Degrees and Awarded Degrees, provide correct subsumption, and avoid the use of vivo:Relationship. Further, we could rename AwardedDegree AcademicDegree (!) and rename AcademicDegree to AcademicDegreeProcess and eliminate the need for the EducationalProcess currently in the model. PERSON: Michael Conlon Merriam Webster (https://www.merriam-webster.com/dictionary/degree) Academic Department A distinct, usually specialized educational unit within an educational organization. Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts) Academic Term An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester. Academic Year An explicit individual period considered by an academic institution to be its primary academic cycle. Administrator Role Advisee Role Advising Process Advising Relationship A dual relationship of one person being advised or mentored by another person, typically including start and end dates Advisor Role Association A formal organization of people or groups of people around a subject or practice. A group of persons or organizations organized for a common purpose. Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA) Attendee Role A role of attending an Event or EventSeries Attending Process Authorship Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers. This class allows for linking an author to a publication while indicating information about that author's authorship. Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication. Currently any abstract name is given to members of this class. This could change in the future. Award or Honor The Wiley Prize in Biomedicine is awarded each year to a researcher for outstanding contributions to biomedicine. A recognition of outstanding work or action. The ObjectProperty relates is used to associate an Award with an AwardReceipt. A preferred approach would be to recognize the AwardReceipt as an information artifact which is the output of the Award process. The award receipt is about the recipient of the award. This would eliminate the use of relates and relatedBy in the representation of Awards and AwardReceipts, provide correct subsumption, and avoid the use of vivo:Relationship. We could then rename AwardReceipt to Award (!) and Award to AwardProcess to reflect their natures (this is why ontologies use numbered class names -- to avoid renaming) PERSON: Michael Conlon Merriam Webster (https://www.merriam-webster.com/dictionary/award) Award or Honor Receipt The award bestowed may be represented with the Award class. The bestowal of an award, honor, or distinction to a person or person's at a particular time. Awarded Degree The awarding of a degree by an agent to another agent. It is mostly for academic degrees. Blog Blog is short for weblog. Library of Congress Blog Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger Blog Posting A specific blog posting An online article or commentary appearing on a blog Building Building that provides a particular service or is used for a particular activity. Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address. Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium Campus Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus). The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site. Case Study A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis. A qualitative descriptive research study of individuals or a group Catalog A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them NLM Catalog Short Definition is the Medical Subject Heading (MeSH) definition Center A place where a particular activity or service is concentrated. Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center An organization where a specified activity is concentrated. Short Definition take from http://www.thefreedictionary.com/center. Certificate A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment. A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment. Certification An issued certificate see also core:Certificate Clinical Organization Any organization that offers significant health services or routinely provides medical care to patients. Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations "are" clinical and some "are" research organizations and that the distinction is important enough to warrant the additional class and class assertions Clinical Role A role of observing or treating patients Co-Principal Investigator Role Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel. College A primary academic unit within a University or a free-standing higher education organization without graduate degree programs A primary academic unit within a University or a free-standing higher education organization without graduate degree programs. College of Arts & Sciences; Ivy Tech Community College Committee A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration A group of people organized for a specific purpose, whose members are often selected from a larger group to serve for designated periods of time. Curriculum Steering Committee; PhD Advisory Committee There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important. Company A legally-recognized business organization A legally-recognized business organization. from Wikipedia: "A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a "legal person". The name company arose because, at least originally, it represented or was owned by more than one real or legal person." Competition An occasion on which a winner is selected from among two or more contestants. Intel Talent Search; poetry contest Not the same as an award or distinction. Conference Paper A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue Conference Poster The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented Conference Series An organized series of a meeting for consultation or discussion. For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar. Consortium A group of independent organizations working together toward a common goal, under an expressed agreement. Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio Continent A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf. Short Definition take from http://en.wiktionary.org/wiki/continent. The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America Contract An agreement involving specific deliverables and payment Core Laboratory A lab providing services such as training, protocols, or access to instruments or software Country Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America An area of land distinguished by its political autonomy. Politically independent territories. Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing. County Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo Short Definition modified from the one found here: http://www.thefreedictionary.com/county. The largest administrative division of most states or provinces. Course A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010 A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010 Credential A driver's license is the result of a credentialing process An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so. The ObjectProperty relates is used to associate a Credential with an IssuedCredential. A preferred approach would be to recognize the IssuedCredential as an information artifact which is the output of the Credential process. The IssuedCredential is about the recipient of the issued credential. This would eliminate the use of relates and relatedBy in the representation of Credentials and IssuedCredentials, provide correct subsumption, and avoid the use of vivo:Relationship. We could then rename IssuedCredential to Credential (!) and Credential to CredentialingProcess which would reflect their true nature. Other ontologies used numbered class names to avoid the need to rename in such cases. PERSON: Michael Conlon Merriam Webster (https://www.merriam-webster.com/dictionary/credential) Database A structured file of information or a set of logically related data stored and retrieved using computer-based means PubMed Short Definition is the Medical Subject Heading (MeSH) definition Dataset A named collection of data, usually containing only one type of data US Patent Data; US Job Data Date/Time Interval a specific period or duration, defined by (optional) start and end date/times. Date/Time Value A date and/or time DateTime Value Precision A dateTimeValue may have yearDateTimePrecision indicating that only the year is known. The precision of a DateTimeValue DateTimeValuePrecisions are represented as individuals of this class. PERSON: Michael Conlon Department A unit within a larger organization that addresses a specific subject or area of activity. Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division. Legal (department within a company); Use for any non-academic department Division A major unit or section within a larger organization. Cardiovascular Medicine (division within medicine) Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department. Editor Role An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series Editorial Article An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces Editorship A relationship that represents the recognition of an agent as an editor. Educational Process Currently any abstract name is given to individuals of this class. This could change in the future. Represents educational training that has been received. This connects person to their academic degree through this educational training, but can also be used when the training does not result in a degree. Jane is collector of Collection c. Jane is a person. Jane bearer_of collectorRole r. r realized_in CollectionProcess p. p has_output c. A process which has as its output, a collection of material entities and/or information content entities Under development. The restriction applies to has output assertions. Collections of material entities are material entities. Collections of information content entities are information content entities. Person: Michael Conlon Process resulting in a collection Collection Process Jane is curator of Collection c. Jane is a person. Jane bearer_of curatorRole r. r realized_in CurationProcess p. p has_input c. A process which has as its input, a collection of material entities and/or information content entities Under development. The restriction applies to has input assertions. Collections of material entities are material entities. Collection of information content entities are information content entities. PERSON: Michael Conlon The curation of a collection Curation Process Faculty Member Emeritus A retired faculty member who has retained their rank, title and privileges. Librarian Emeritus A retired librarian who has retained their rank, title and privileges. Professor Emeritus A retired professor who has retained their rank, title and privileges. Equipment A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes. A physical object provided for specific purpose, task or occupation. server; Bruker Vector-33 FT-IR Event Series A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes. Only use if no specific subclasses of core:EventSeries desribe the activity. Two or more events that occur at different times and are connected to each other. Exhibit The showing of an object or a collection of objects, in an organized manner. Extension Unit A unit devoted primarily to extension activities, whether for outreach or research A unit devoted primarily to extension activities, whether for outreach or research. Alachua County Extension Office F1000 Link F1000 is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews. Facility Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility. Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service. Use subclasses of core:Facility subclasses instead of this class if possible Faculty Administrative Position An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic) Associate Dean That is a position held by an academic faculty member who works for administration. Faculty Member A person with at least one academic appointment to a specific faculty of a university or institution of higher learning. Definition from here: http://research.carleton.ca/htr/defs.php. Faculty Mentoring Relationship An advisory relationship in which one faculty member mentors another faculty member. Faculty Position Academic position in a university or institution Professor, associate professor and assistant professor are common positions for academic faculty. Professor; Associate Professor; Assistant Professor Foundation An institution founded with an endowment to support educational, research, artistic or other charitable activities. Definition take from: http://dictionary.reference.com/browse/foundation. The Ford Foundation Funding Organization A defined class of organizations that fund Grants An organization that provides financial support to individuals or organizations to carry out specified activities. National Institute of Health (NIH) Geographic Location A location having coordinates in geographic space. Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion. Use subclasses of core:Geographic Location subclasses instead of this class if possible. Geographic Region A location having coordinates in geographic space. Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion. Use subclasses of core:Geographic Region subclasses instead of this class if possible. Geopolitical Entity A geographical area which is associated with some sort of political structure. Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity. Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible. Government Agency A unit of government responsible for oversight and regulation of certain activities or the administration and provision of specific services. Definition take from: http://en.wikipedia.org/wiki/Government_agency. United States Library of Congress Graduate Advising Relationship An advisory relationship in which a professor advises a graduate student. Graduate Student A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree. Grant An intramural or extramural award to support scholarly work, such as UF09179 (VIVO) Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity Short definition is from the Glossary of NIH Terms. Hospital An institution that provides medical, surgical, psychiatric or nursing care. Definition take from: http://dictionary.reference.com/browse/hospital. Shands at the University of Florida Institute An Institute normally has a research focus but may also fulfill instructional or outreach roles An organization founded to pursue or promote certain research, educational or public policy interests or activities. Institute for Fundamental Theory Internship Typically a student or a recent graduate undergoing supervised practical training. Investigator Role A role in an Agreement (for example, a grant) as a named investigator or key personnel. Invited Talk Issued Credential Laboratory An organization unit that facilitates or conduits observation, testing, experimentation, or research in a field of study or practice. An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials Leader Role A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization. A leadership role Librarian A person working in a position of librarian or information professional, or academic or technical expert in support of providing information services or materials. Librarian Position A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials It is the common position in libraries. Librarian; Library Systems Analyst; Music Bibliographer Library An organization maintaining one or more collections of physical and/or electronic information resources for access or lending. Marston Science Library Used information from this definition: http://dictionary.reference.com/browse/library. License Licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:Licensure. Official or legal permission to do something Licensure A granted license, which gives a 'permission to practice.' A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License. Location It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class. Top level of all location classes. Use subclasses of core:Location when classsifying items. Medical Residency Residency is a stage of graduate medical training. Meeting A gathering of people for a defined purpose, not necessarily public or announced Member Role A role of being a member in a Process or an Organization Museum An organization devoted to the acquisition, conservation, study, exhibition, and educational interpretation of objects having scientific, historical, cultural or artistic value. Definition was take from here: http://dictionary.reference.com/browse/museum The Getty Museum News Release A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature. Newsletter The Ornithological Newsletter Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public Non-Academic A person holding a position that is not considered to be an academic appointment. Non-Academic Position A position classified as professional, staff, support, or any other non-academic role Accounting & Research Services Assistant; Director of Information Technology Staff, support, and other non-academic positions. Non-Faculty Academic A person not considered a faculty member but holding an academic appointment. Non-Faculty Academic Position A position involving academic work but without faculty status Researcher; Academic Extension Associate; Postdoctoral Associate Those positions are held by people who do academic work but do not have faculty positions in universities or institutes. Organizer Role A role of organizing Organizing Process Outreach Provider Role An outreach or community service role directed outside a person's primary profession and institution Communicating Astronomy to the Public The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here. Peer Reviewer Role A role of peer reviewing is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing. Contents [hide] Populated Place Either city or town - a thickly populated area having fixed boundaries and certain local powers of government. Position An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified. Director of Admissions and Placement; Associate University Librarian Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position. Postdoc A Person holding an academic employment appointment focused on research rather than teaching; temporary (or for some defined term) Postdoc or Fellow Advising Relationship An advisory relationship in which the advisee is a Postdoc or Fellow. Postdoctoral Position A postdoctoral training appointment (job) Postdoctoral Training Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject. Presentation Encompasses talk, speech, lecture, slide lecture, conference presentation Presenter Role A role of presenting information Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee? Presenting Process Primary Position A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position. A position designated as primary by the organization where it is held. Principal Investigator Role Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director. Private Company A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company. Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html Publix Super Markets; Ernst & Young; PricewaterhouseCoopers Program A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820) An ongoing academic initiative not formalized with department or division status. Project An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. Publisher A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc. Definition found here: http://dictionary.reference.com/browse/publisher Elsevier; Harper & Row; Indiana University Press Relationship a reified relationship functions as an n-ary predicate Research Organization Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles Research Proposal A proposal for a research grant that has been submitted but not approved; does not represent an existing activity Researcher Role A role of conducting funded or unfunded research, sometimes linked to an Agreement. Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be. Review An article reviewing one or more other information resources (a book, one or more other articles, movies, etc) Reviewer Role A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper. A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper. Room 100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room) Enter room number of name. Room that provides a particular service or is used for a particular activity. School An institution for instruction in a particular skill or field. Definition take from here: http://dictionary.reference.com/browse/school. School of Architecture; School of Music Score Written musical composition for voice or instruments or both Screenplay Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions Seminar Series An organized series of a meeting for an exchange of ideas, typically put on by a department or center. Applied Microeconomics Seminars; Future of Rural New York Seminar Series For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar. Service Providing Lab A laboratory that provides services Ideally a defined class -- a Laboratory the provides some Service via the property Speech Text of a speech written in preparation for delivery of the speech. State or Province Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US. Source of the Short Definition: http://www.thefreedictionary.com/state. Student A person who is enrolled in an educational institution. Use only if no specific subclasses of core:Student describe the person. Student Organization A student organization is an organization, operated by students at a university, whose membership normally consists only of students. Dancin' Gators Definition take from here: http://en.wikipedia.org/wiki/Student_society Subnational Region Boroughs; townships; districts; the Midwest For example, the Midwest, northeast U.S. Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity. Smaller administrative division into which a country may be divided. Teacher Role A role of serving as an educator Team A group of people working together. An informal organization brought together for the purposes of a project or event VIVO Outreach Team; VIVO Ontology Team Translation The result of rendering a work from one language to another Undergraduate Advising Relationship An advisory relationship in which a professor advises an undergraduate student. Undergraduate Student A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate. University An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education. Definition taken from: http://en.wikipedia.org/wiki/University University of Florida; Washington University in St. Louis Video Audiovisual recording in video format Working Paper A document created as a basis for discussion or a very early draft of a formal paper Workshop Series An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops. Use workshop for individual events. Phase 0 Clinical Trial Phase 0 Clinical Trial Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies. Phase 1 Clinical Trial In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects Phase 1 Clinical Trial Phase 2 Clinical Trial In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety. Phase 2 Clinical Trial Phase 3 Clinical Trial In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. Phase 3 Clinical Trial Phase 4 Clinical Trial In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use. Phase 4 Clinical Trial Concept Acquaintance Address 1 1 1 1 1 To specify the components of the delivery address for the vCard object Addressing 1 1 1 1 These types are concerned with information related to the delivery addressing or label for the vCard object Agent Calendar 1 1 Calendar Busy 1 To specify the URI for the busy time associated with the object that the vCard represents. Was called FBURI in vCard Calendar Link 1 To specify the URI for a calendar associated with the object represented by the vCard. Was called CALURI in vCard. Calendar Request 1 To specify the calendar user address [RFC5545] to which a scheduling request [RFC5546] should be sent for the object represented by the vCard. Was called CALADRURI in vCard Category 1 To specify application category information about the vCard, also known as tags. This was called CATEGORIES in vCard. Cell Also called mobile telephone Child Code Contains all the Code related Classes that are used to indicate vCard Types Colleague Communication 1 1 1 1 These properties describe information about how to communicate with the object the vCard represents Contact Coresident Coworker Crush Date Email 1 To specify the electronic mail address for communication with the object the vCard represents Emergency Explanatory 1 1 1 1 These properties are concerned with additional explanations, such as that related to informational notes or revisions specific to the vCard Fax Female Formatted Name 1 Specifies the formatted text corresponding to the name of the object the vCard represents Friend Gender Geo 1 Used to indicate global positioning information that is specific to an address Geographical 1 These properties are concerned with information associated with geographical positions or regions associated with the object the vCard represents Group 1 Defines all the properties required to be a Group of Individuals or Organizations Home This implies that the property is related to an individual's personal life Identification 1 1 1 1 These types are used to capture information associated with the identification and naming of the entity associated with the vCard Individual 0 1 1 1 Defines all the properties required to be an Individual Messaging 1 To specify the URI for instant messaging and presence protocol communications with the object the vCard represents. Was called IMPP in vCard. Key 1 Kin VCard Kind 0 0 1 0 0 0 0 The parent class for all vCard Objects Language 1 To specify the language(s) that may be used for contacting the entity associated with the vCard. Location Defines all the properties required to be a Location Logo 1 To specify a graphic image of a logo associated with the object the vCard represents Male Me Met Muse Name 0 1 1 0 0 Specifies the components of the name of the object the vCard represents Neighbor Nickname 1 Specifies the text corresponding to the nickname of the object the vCard represents None Note 1 To specify supplemental information or a comment that is associated with the vCard Organization Defines all the properties required to be an Organization To specify the organizational name associated with the vCard Organization Name 1 Organizational Unit Name 1 Organizational 1 1 1 1 These properties are concerned with information associated with characteristics of the organization or organizational units of the object that the vCard represents Other Pager Parent Photo 1 Specifies an image or photograph information that annotates some aspect of the object the vCard represents Related 1 To specify a relationship between another entity and the entity represented by this vCard Relation Type Security 1 1 1 Contains all the Security related Classes Sibling Sound 1 To specify a digital sound content information that annotates some aspect of the vCard. This property is often used to specify the proper pronunciation of the name property value of the vCard Spouse Sweetheart Telephone 1 Telephone Type Text Also called sms telephone Text Phone Time Zone 1 Used to indicate time zone information that is specific to a location or address Title 1 To specify the position or job of the object the vCard represents Type This is called TYPE in vCard but renamed here to Context for less confusion (with types/class) URL 1 To specify a uniform resource locator associated with the object to which the vCard refers. Examples for individuals include personal web sites, blogs, and social networking site identifiers. Unknown Video Voice Work This implies that the property is related to an individual's work place Agent Agents are things that do stuff An agent PERSON: Scott Hoffmann Things that do stuff. agent see: http://xmlns.com/foaf/spec/#term_Agent Used to describe any "agent" related to bibliographic items. Such agents can be persons, organizations or groups of any kind. Group A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). A collection of individual agents. A group A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event. see: http://xmlns.com/foaf/spec/#term_Group PERSON: Scott Hoffmann group Organization A generic class encompassing several types of organizations. A kind of Agent corresponding to social instititutions such as companies, societies etc. An organization Only use if no specific subclasses of foaf:organization desribe the organization. PERSON: Scott Hoffmann This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available. organization Ued to describe an organization related to bibliographic items such as a publishing company, etc. Person A person An instance of a human being (Homo sapiens) PERSON: Melissa Haendel The most general classification of a person person 1