{ "metadata": { "name": "" }, "nbformat": 3, "nbformat_minor": 0, "worksheets": [ { "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Reproducible Research\n", "\n", " - Recent paper: http://jes.ecsdl.org/content/160/12/D3260.abstract\n", " \n", "Things to do to make paper reproducible\n", "\n", " - http://ivory.idyll.org/blog/replication-i.html\n", "\n", " \n", "Here's what I've done\n", "\n", " - IPython notebooks for figures (useless without simulation data and meta-data)\n", "\n", " - http://nbviewer.ipython.org/github/wd15/extremefill2D/blob/master/notebooks/fig5_image.ipynb\n", " \n", " - Github repository with code\n", "\n", " - https://github.com/wd15/extremefill2D\n", " \n", " - Simulation meta-data in a repository (not public yet)\n", " \n", "Not really reproducible yet\n", " \n", "What do I need to do?\n", "\n", " - Release simulation meta-data\n", " \n", " - Release simulation data\n", " \n", " - where do I put 10 GB of simulation data\n", " \n", " - No paper repository, written in Word by colleague\n", " \n", " - Amazon machine image of environment\n", " \n", " - Continuous integration testing\n", "\n", "What do I do now with limited time?\n", "\n", "What else is required?" ] }, { "cell_type": "code", "collapsed": false, "input": [], "language": "python", "metadata": {}, "outputs": [] } ], "metadata": {} } ] }