This pathway shows an simplified version of the Krebs cycle (for more details see [https://www.wikipathways.org/index.php/Pathway:WP78] ), with 4 genetic diseases related to it.
For succinyl-CoA synthetase deficiencies, relevant metabolic markers are depicted in light green.
Patients with a mutation in the SUCLG1 might present a severe (fatal) form of mitochondrial encephalomyopathy.
This pathway was inspired by Chapter 20 of the book of Blau (ISBN 3642403360 (978-3642403361)).a65a07Nucleoside diphosphate kinaseAKA LDH lactate dehydrogenaseAKA pyruvate dehydrogenaseAKA Mitochondrial pyruvate transportAKA alanine aminotransferaseSCS (succinyl-CoA syntethase)For more info see: https://en.wikipedia.org/wiki/Succinyl_coenzyme_A_synthetaseAKA phosphoenolpyruvate carboxykinaseAKA lactate dehydrogenase C; expressed in testes.SCS (succinyl-CoA syntethase)For more info see: https://en.wikipedia.org/wiki/Succinyl_coenzyme_A_synthetaseFumarate hydrataseComposed of 3 subunits"Homodimer. The 2-oxoglutarate dehydrogenase (ODH) complex contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity)." [https://www.uniprot.org/uniprot/Q1B4V6]Not in original drawing, adapted from https://www.wikipathways.org/index.php/Pathway:WP78Not in original drawing, adapted from https://www.wikipathways.org/index.php/Pathway:WP78a.k.a. 2-methylcitric acida.k.a. 2-methylcitric acidSuccinate-CoA ligase alpha-subunitSCS (succinyl-CoA syntethase)For more info see: https://en.wikipedia.org/wiki/Succinyl_coenzyme_A_synthetaseSuccinate-CoA ligase alpha-subunitSCS (succinyl-CoA syntethase)For more info see: https://en.wikipedia.org/wiki/Succinyl_coenzyme_A_synthetaseSCS (succinyl-CoA syntethase)For more info see: https://en.wikipedia.org/wiki/Succinyl_coenzyme_A_synthetaseSuccinate-CoA ligase alpha-subunitNucleoside diphosphate kinaseSCS (succinyl-CoA syntethase)For more info see: https://en.wikipedia.org/wiki/Succinyl_coenzyme_A_synthetaseNucleoside diphosphate kinaseAKA LDH-1 lactate dehydrogenase 1, 4H; expressed in heart, red blood cells (RBC), brain)AKA LDH-2 lactate dehydrogenase 2 (3H1M); expressed in reticuloendohelial systemAKA LDH-3 lactate dehydrogenase 3 (2H2M); expressed in lungsAKA LDH-4 lactate dehydrogenase 4 (1H3M); expressed in kidneys, placenta, pancreas.AKA LDH-5 lactate dehydrogenase 5 (4M); expressed in liver, striated muscle, brain.AKA alanine aminotransferased18ba2d18ba2e84d18ba2a07a07e84d18ba2e84d18ba2d18ba2a07a07eb2a07a07"[...]In most patient, the E2 subunit could be responsible for the "classic metabolic" presentation of 2-oxoglutaric aciduria" [Chapter 20, book of Blau]Clinically recognisable form of:
deafness, onycho-osteodystrophy,
thumbs and sensorineural deafness,
is related to defect of E1 subunit.Encephalopathic form is related
to E2 subunit deficiencymethylmalonic acidemiaDOID:14749Disease1653609PubMedApparent ATP-linked succinate thiokinase activity and its relation to nucleoside diphosphate kinase in mitochondrial matrix preparations from rabbit.Biochim Biophys Acta1991Kadrmas EFRay PDLambeth DO25748677PubMedMitochondrial pyruvate transport: a historical perspective and future research directions Biochem J.2015Kyle S McCommisBrian N Finckcitric acid cycle pathwayPW:0000026Pathway Ontology8016083PubMedCharacterization of nucleoside-diphosphate kinase from Pseudomonas aeruginosa: complex formation with succinyl-CoA synthetase.Proc Natl Acad Sci U S A1994Kavanaugh-Black AConnolly DMChugani SAChakrabarty AM11831846PubMedLocalization and characterization of the mitochondrial isoform of the nucleoside diphosphate kinase in the pancreatic beta cell: evidence for its complexation with mitochondrial succinyl-CoA synthetase.Arch Biochem Biophys2002Kowluru ATannous MChen HQ24363178PubMedDisorders of the Pyruvate Metabolism and the Krebs CycleCell Mol Life Sci .2014Lawrence R GraySean C TompkinsEric B Taylor9783642403361ISBNPhysician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic DiseasesSpringer-Verlag Berlin Heidelberg2014Nenad BlauMarinus DuranK Michael GibsonCarlo Dionisi-Vici.mitochondrial encephalomyopathyDOID:890Diseasefumaric aciduria pathwayPW:0002098Pathway Ontology