Label Type Identifier Comment Ensembl NCBI gene HGNC UniProt Wikidata ChEBI InChI HOX 22 GeneProduct :LOC_Os04g45810 In Cooper et al. 2003 protein sequence provided matches HOX 22, however it was named HOX6 (AF145730) Dynamin GeneProduct :LOC_Os06g13820 IAA amidohydrolase GeneProduct :LOC_Os03g62060 HSP40 GeneProduct :LOC_Os03g44620 bHLH60 GeneProduct :LOC_Os08g04390 Helix-loop-helix TF MADS 18 GeneProduct :LOC_Os07g41370 Also called MADS 28 PPDKB GeneProduct :LOC_Os05g33570 Involved in grain filling 2-d-3-D phosphooctonate aldolase GeneProduct :LOC_Os12g10784 GB2 GeneProduct :LOC_Os03g57960 Globulin 2 BTB/POZ GeneProduct :LOC_Os10g29390 2-keto-3-deoxy-6-phosphogluconate aldolase LOC_Os06g39906 GeneProduct :LOC_Os06g39906 NB-ARC domain protein GeneProduct :LOC_Os11g34880 Jacalin ZF-like GeneProduct :LOC_Os01g40990 grpA3 GeneProduct :LOC_Os05g02780 EXPB4 GeneProduct :LOC_Os10g40730 Beta-expansin-4 Bam 4 GeneProduct :LOC_Os07g47120 Pyrrolidone-Carboxylpeptidase GeneProduct :LOC_Os03g25270 SPS-O spp GeneProduct :LOC_Os08g20660 sucrose-phosphate synthase-Oncidium spp= named after table III on Yamakawa et al. (2007) IAA4 GeneProduct :LOC_Os01g18360 Cyp2 GeneProduct :LOC_Os02g02890 Bam 7 GeneProduct :LOC_Os03g04770 Thioredoxin-like GeneProduct :LOC_Os04g57310 thiol-disulphide oxidoreductase DCC Shaggy kinase GeneProduct :LOC_Os10g37740 Pto kinase Interactor 1 GeneProduct :LOC_Os05g04520 LOC_Os09g38090 GeneProduct :LOC_Os09g38090 PCNA GeneProduct :LOC_Os02g56130 Proliferating cell nuclear antigen expressed strongly in the shoot apical meristem GDSL-like Lipase GeneProduct :LOC_Os10g05088 SGNH_plant_lipase PP2A-3 GeneProduct :LOC_Os02g12580 TRNA endonuclease GeneProduct :LOC_Os11g38930 catalytic C-terminal domain containing protein SSIVb GeneProduct :LOC_Os05g45720 Also called ALK UDP-glucosyl transferase GeneProduct :LOC_Os04g12960 WRKY 51 GeneProduct :LOC_Os04g21950 ABA-inducible & GA-repressible WRKY 51 by itself also represses activation of Amy2A by GAMYB RSR1 GeneProduct :LOC_Os01g40280 RAD6 GeneProduct :LOC_Os03g57790 transcripts of both OsRad6 and OsSgt1 were found to be strongly expressed in the proliferating tissues such SAM HAD-like GeneProduct :LOC_Os03g16670 Myosin like GeneProduct :LOC_Os05g02820 SAM cmtr GeneProduct :LOC_Os02g06770 Kinesin GeneProduct :LOC_Os03g43100 SSIIIb GeneProduct :LOC_Os04g53310 Also called ALK EF-1-d2 GeneProduct :LOC_Os03g29260 Elongation factor 1 beta 2 Keto acyl CoA thiolase GeneProduct :LOC_Os02g57260 OsFBX237 GeneProduct :LOC_Os07g35050 Cdc2-related protein kinase ZIP-1a GeneProduct :LOC_Os12g13170 eif(iso)4g GeneProduct :LOC_Os04g42140 Fructose-6-phosphate 1-phosphotransferase GeneProduct :LOC_Os08g25720 GluA-3 GeneProduct :LOC_Os03g31360 RAV1-like GeneProduct :LOC_Os01g49830 LEA 14-A GeneProduct :LOC_Os05g50710 GABA permease GeneProduct :LOC_Os01g71720 Amino acid/polyamine transporter OsIAA13 GeneProduct :LOC_Os03g53150 OSE2 GeneProduct :LOC_Os01g64730 bZIP transcription factor domain containing protein MAPK2 GeneProduct :LOC_Os02g05480 UniProt:MAPK2, BIMK1, MAP3, MAPK5, MPK3, MSRMK2 IDI2 GeneProduct :LOC_Os11g11050 Initiation factor 2 subunit family protein AP37 GeneProduct :LOC_Os01g58420 SNAC1 GeneProduct :LOC_Os03g60080 IDS1/ MT4A GeneProduct :LOC_Os12g38270 GBSSII GeneProduct :LOC_Os07g22930 Also called ALK Ser/thr PK GeneProduct :LOC_Os06g04880 LOC_Os03g50390 GeneProduct :LOC_Os03g50390 Protein Kinase-UniProt ID PRP1 GeneProduct :LOC_Os05g13940 INV2 GeneProduct :LOC_Os01g22900 Neutral/alkaline invertase 2 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) Phosphoglucomutase GeneProduct :LOC_Os05g48200 EPSPS1 GeneProduct :LOC_Os06g04280 5-Enolpyruvylshikimate-3-phosphate synthase 1 APL4/ AGPL4 GeneProduct :LOC_Os07g13980 CycD2-2 GeneProduct :LOC_Os07g42860 Amy3A GeneProduct :LOC_Os09g28400 TPR-PK GeneProduct :LOC_Os03g61010 Putative protein kinase SPS-Zm GeneProduct :LOC_Os06g42824 sucrose-phosphate synthase-Zea mays= named after table III on Yamakawa et al. (2007) FERTILLIN GeneProduct :LOC_Os06g01650 Disease resistance-like GeneProduct :LOC_Os12g40490 LIM domain-containing protein, putative, expressed bip129 GeneProduct :LOC_Os08g40790 KOB1 GeneProduct :LOC_Os02g57240 Probable voltage-gated potassium channel subunit beta GP-alpha-1 GeneProduct :LOC_Os05g26890 G-alpha protein also called GPA1/D1/GA1 DAHPS1 GeneProduct :LOC_Os03g27230 3-deoxy-D-arabino heptulosonate-7-phosphate synthase 1 NAAT1 GeneProduct :LOC_Os02g20360 nicotianamine aminotransferase NAC5 GeneProduct :LOC_Os11g08210 ABA related SSIIIa/ Flo5 GeneProduct :LOC_Os08g09230 expression diminished during grain filling at high temperatures Amy4A GeneProduct :LOC_Os01g51754 NAC2 GeneProduct :LOC_Os02g57650 U2 snRNP GeneProduct :LOC_Os11g41820 SPS-So GeneProduct :LOC_Os06g43630 sucrose-phosphate synthase-Saccharum officinarum= named after table III on Yamakawa et al. (2007) Pr1b GeneProduct :LOC_Os01g28450 GluA-2 GeneProduct :LOC_Os10g26060 MTN GeneProduct :LOC_Os06g02220 Methylthioadenosine/S-adenosyl homocysteine nucleosidase RPS20 GeneProduct :LOC_Os06g04290 P35686 Phosphotyrosine GeneProduct :LOC_Os08g44320 Ser/thr PK GeneProduct :LOC_Os02g43290 ZOS1-15 GeneProduct :LOC_Os01g62190 Salt-stress ABA related MADS7/45 GeneProduct :LOC_Os08g41950 also called MADS 45, AGL6, M79 ARD2 GeneProduct :LOC_Os03g06620 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2; Also called IDI1 and SIP2A GAMYB GeneProduct :LOC_Os01g59660 regulates GA induction of Amy2A ALDH7 GeneProduct :LOC_Os09g26880 Needed for seed maturation and viability. Expression Patterns during Seed Development Correspond with Pigment Accumulation Patterns in Seeds Plays a role in the removal of MDA that forms during seed desiccation DOF ZF GeneProduct :LOC_Os02g49440 WRKY 71 GeneProduct :LOC_Os02g08440 ABA-inducible & GA-repressible Interaction between WRKY 51 and 71 enhances the binding affinity of WRKY71 to the Amy32b promoter WRKY 71 by itself also represses activation of Amy2A by GAMYB Complex 1L GeneProduct :LOC_Os06g50000 Assigned as Complex 1L by Nemeth D and Hanumappa M (10/21/2010) complex 1 family protein-like (LYR family) PP2A-B GeneProduct :LOC_Os05g40350 GF14A GeneProduct :LOC_Os08g37490 WIN2, WIP2 PROLM26 GeneProduct :LOC_Os07g10580 Prolamin precursor, also called RP5 MT2b GeneProduct :LOC_Os05g02070 IAA1 GeneProduct :LOC_Os01g08320 LOC_Os01g14110 GeneProduct :LOC_Os01g14110 Assigned as bHLH-tf by Nemeth D and Hanumappa M (10/21/2010) TAP46 GeneProduct :LOC_Os12g04290 PIT GeneProduct :LOC_Os01g05620 Permease GeneProduct :LOC_Os07g04180 SSII-3 GeneProduct :LOC_Os06g12450 expression diminished during grain filling at high temperatures SuSy6 GeneProduct :LOC_Os04g24430 Sucrose synthase 6 NAC 10 GeneProduct :LOC_Os11g03300 Myosin like GeneProduct :LOC_Os03g16120 Sub9 GeneProduct :LOC_Os01g58290 Amino acid transporters DUF630 GeneProduct :LOC_Os10g41310 Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) CACTA, En/Spm GeneProduct :LOC_Os01g09220 CDKA-2 GeneProduct :LOC_Os02g03060 PHT4;3 GeneProduct :LOC_Os01g63290 Na+ dep inorg phosphate cotransporter Oryzain alpha Protease GeneProduct :LOC_Os04g55650 msrB-1 GeneProduct :LOC_Os03g24600 2 more IDs found on Gramene. Hence called 1, 2 and 3 to differentiate. LOC_Os06g27760=msrB-2, LOC_Os05g33510=msrB-3 (D Nemeth and M Hanumappa 08/17/2010).
Type your comment here GTP cyclohydrolase GeneProduct :LOC_Os05g38570 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase Ubiquitin proteinase GeneProduct :LOC_Os02g43760 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed PP2A1 GeneProduct :LOC_Os06g37660 LOC_Os01g62740 GeneProduct :LOC_Os01g62740 Bam 5 GeneProduct :LOC_Os10g32810 AP2 domain GeneProduct :LOC_Os03g64260 SET domain protein GeneProduct :LOC_Os02g40770 histone-lysine N-methyltransferase UOS1 GeneProduct :LOC_Os06g49120 NAD(P)-binding/Rossman fold SPK GeneProduct :LOC_Os10g39420 required for storage product accumulation during seed development seed-specific protein kinase MADS 3 GeneProduct :LOC_Os01g10504 Also called RAG USP1 GeneProduct :LOC_Os07g47620 ETFP adenine nucleotide LOC_Os03g56940 GeneProduct :LOC_Os03g56940 GPT2-B GeneProduct :LOC_Os01g07310 Assigned as GPT-B by Nemeth D and Hanumappa M (10/21/2010) BT1-1 GeneProduct :LOC_Os05g07900 SPS-Hv GeneProduct :LOC_Os02g09170 sucrose-phosphate synthase-Hordeum vulgare= named after table III on Yamakawa et al. (2007) LPLA GeneProduct :LOC_Os08g33810 NAS2 GeneProduct :LOC_Os03g19420 NA synthase gene 2 GW2 GeneProduct :LOC_Os02g14720 encodes a RING protein with E3 ubiquitin ligase activity GDSL-like Lipase GeneProduct :LOC_Os01g11650 ARF1 GeneProduct :LOC_Os11g32110 UGP GeneProduct :LOC_Os02g02550 DEP GeneProduct :LOC_Os11g29370 Haloacid dehalogenase-like hydrolase family protein flavanone 3-hydroxylase GeneProduct :LOC_Os08g37456 2-oxoglutarate (2OG) - Fe(II) oxygenase BBTI4 GeneProduct :LOC_Os01g03340 Bowman-Birk type bran trypsin inhibitor HMG1 GeneProduct :LOC_Os06g51220 PPROL 14 E GeneProduct :LOC_Os05g26377 13 kDa Prolamin, also called PPROL 14, PPROL 4A, PPROL 7, PG5a, PROLM 8, PROLM 9, UniProt ID: Q95737 CIN1 GeneProduct :LOC_Os02g33110 ADP ribosylation GTPase GeneProduct :LOC_Os03g17020 MADS 6 GeneProduct :LOC_Os02g45770 Also called MFO1 GLUB4 GeneProduct :LOC_Os02g16830 SuSy4 GeneProduct :LOC_Os03g22120 Sucrose synthase 4 GF14-e GeneProduct :LOC_Os02g36974 CDKA-1 GeneProduct :LOC_Os03g02680 IDEF2 GeneProduct :LOC_Os05g35170 IDE-binding factor 2 SUS1 GeneProduct :LOC_Os03g28330 Sucrose synthase 1 LOC_Os01g12080 GeneProduct :LOC_Os01g12080 Amy3E GeneProduct :LOC_Os08g36900 prx61 GeneProduct :LOC_Os04g59190 Class III peroxidase 61 MADS13 GeneProduct :LOC_Os12g10540 Also called MAF1 SWEET3a GeneProduct :LOC_Os05g12320 BEIII GeneProduct :LOC_Os06g26234 Pectinesterase GeneProduct :LOC_Os07g02810 VIP1-like GeneProduct :LOC_Os06g02240 AREB GeneProduct :LOC_Os05g41070 PPDKA GeneProduct :LOC_Os03g31750 Assigned as GPT-B by Nemeth D and Hanumappa M (10/21/2010) PUL GeneProduct :LOC_Os04g08270 expression diminished during grain filling at high temperatures CCT/B-box zinc finger GeneProduct :LOC_Os02g49230 CIN3 GeneProduct :LOC_Os04g33720 TUBB3 GeneProduct :LOC_Os06g46000 Tubulin beta-3 chain ACO1 GeneProduct :LOC_Os09g27750 SAP11 GeneProduct :LOC_Os08g39450 Also called ZFP60 MADS47 GeneProduct :LOC_Os03g08754 Also called MDP KRP3 GeneProduct :LOC_Os11g40030 DMAS1 GeneProduct :LOC_Os03g13390 Deoxymugineic acid synthase1 CIN5 GeneProduct :LOC_Os04g56930 LOC_Os03g07360 GeneProduct :LOC_Os03g07360 RIC1 GeneProduct :LOC_Os01g37800 RBCL GeneProduct :LOC_Os10g21268 CIN2 GeneProduct :LOC_Os04g33740 DEK1 GeneProduct :LOC_Os02g48000 RA GeneProduct :LOC_Os04g47080 seed coat color, endosperm color HSP90 GeneProduct :LOC_Os09g30418 Also called HSP81-2 GF14F GeneProduct :LOC_Os03g50290 G-box factor 14-3-3 f THF1 GeneProduct :LOC_Os07g37250 Inositol phosphatase OsAK GeneProduct :LOC_Os02g41590 Adenosine kinase BADH2 GeneProduct :LOC_Os08g32870 SCENTED KERNEL 2 (fragrance) betaine-aldehyde dehydrogenase 2 GPT1 GeneProduct :LOC_Os08g08840 BEI GeneProduct :LOC_Os06g51084 expression diminished during grain filling at high temperatures PHD zf GeneProduct :LOC_Os03g04980 Male sterility protein GeneProduct :LOC_Os05g43040 EF-1-g3 GeneProduct :LOC_Os06g37440 eEF-1B gamma 3 LOC_Os08g04580 GeneProduct :LOC_Os08g04580 Thioredoxin AOPBP-L GeneProduct :LOC_Os07g48570 CRL1 GeneProduct :LOC_Os03g05510 bZIP GeneProduct :LOC_Os11g06170 CKX2/ Gn1a GeneProduct :LOC_Os01g10110 Cytokinin oxidase/dehydrogenase 2 EIL1 GeneProduct :LOC_Os03g20780 PHD Zn-finger GeneProduct :LOC_Os11g12650 AHOX GeneProduct :LOC_Os10g39030 Associated with HOX family protein, expressed (UniProt Q8LN25)- Assigned as AHOX by Nemeth D and Hanumappa M (08/19/2010) Smt1-1 GeneProduct :LOC_Os07g10600 Cycloartenol-C24-methyltransferase SBEIIb GeneProduct :LOC_Os02g32660 expression diminished during grain filling at high temperatures Acyl carrier GeneProduct :LOC_Os07g12150 Fibrillin GeneProduct :LOC_Os09g04790 OsLKR GeneProduct :LOC_Os02g54254 NAC075 GeneProduct :LOC_Os01g09550 VDAC5 GeneProduct :LOC_Os03g10510 LTPL109 GeneProduct :LOC_Os07g37385 Extensin_2 NAS1 GeneProduct :LOC_Os03g19427 NA synthase gene 1 SCP40 GeneProduct :LOC_Os07g46350 Serine carboxypesidase BTB-TAZ GeneProduct :LOC_Os01g66890 HRGP GeneProduct :LOC_Os03g13560 Hydroxyproline-rich glycoprotein family protein-UniPret ID YSL2 GeneProduct :LOC_Os02g43370 yellow stripe 1-like RALF24 GeneProduct :LOC_Os11g26340 Rapid ALkalinization Factor DUF584 GeneProduct :LOC_Os05g45450 SuSy5 GeneProduct :LOC_Os02g58480 Sucrose synthase 5 IDEF1 GeneProduct :LOC_Os08g01090 IDE-binding factor 2 PSRR-L GeneProduct :LOC_Os07g25710 Phosphate starvation response regulator FBL60 GeneProduct :LOC_Os12g33230 Leucine rich repeat CYP450 GeneProduct :LOC_Os09g10340 Integrase GeneProduct :LOC_Os11g11694 MADS1 GeneProduct :LOC_Os03g11614 Also called LHS1 Hydrolase GeneProduct :LOC_Os02g19650 Iron/ascorbate oxidoreductases Phragmoplast kinase GeneProduct :LOC_Os04g28260 WRKY 55 GeneProduct :LOC_Os03g20550 Bam 2 GeneProduct :LOC_Os07g35940 CycA1-1 GeneProduct :LOC_Os01g13260 Retrotransposon GeneProduct :LOC_Os12g24050 Sulfotransferase beta-fructofuranosidase GeneProduct :LOC_Os03g20020 Neutral/alkaline invertase 1 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) FBK21 GeneProduct :LOC_Os10g21930 F-box domain and kelch repeat containing protein MADS56 GeneProduct :LOC_Os10g39130 HSP70 GeneProduct :LOC_Os12g14070 PP2A2 GeneProduct :LOC_Os03g59060 SUT3 GeneProduct :LOC_Os10g26470 SSIVb GeneProduct :LOC_Os05g45720 taxane 10-beta-hydroxylase GeneProduct :LOC_Os07g33480 Glutamate synthase cytochrome P450 domain containing protein ENOD93-1 GeneProduct :LOC_Os06g05010 EF-1-d1 GeneProduct :LOC_Os07g42300 EF-1B beta 1, EF-1-beta DPE2 GeneProduct :LOC_Os07g46790 Also called ALK ERG3 GeneProduct :LOC_Os04g44870 RPP16 SIP2 GeneProduct :LOC_Os10g28350 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 Ethylene induced Gal1 GeneProduct :LOC_Os10g35110 SGT1 GeneProduct :LOC_Os01g43540 Responds to salicylic acid in chemically induced biotic response Mald1-AP GeneProduct :LOC_Os01g56470 GlyH GeneProduct :LOC_Os11g27400 Chitinase VP1 GeneProduct :LOC_Os01g68370 Interaction with Wsi18 and Lea3 by orthology to H vulgare ABA-related Seed dormancy Interaction with Wsi18 and Lea3 by orthology to H vulgare RCD1-L GeneProduct :LOC_Os04g52340 Also given LOC_Os07g37790 and LOC_Os03g57130 IAA9 GeneProduct :LOC_Os02g56120 vATP synthase C GeneProduct :LOC_Os05g51530 GPT2-3 GeneProduct :LOC_Os07g33910 OsPRP1 GeneProduct :LOC_Os10g05970 Proline rich protein Amy2A GeneProduct :LOC_Os06g49970 ABA-repressible and GA-inducible SNAC2 GeneProduct :LOC_Os01g66120 ABA-related BT1-2 GeneProduct :LOC_Os02g10800 Plasma membrane ATPase GeneProduct :LOC_Os04g56160 IRO2 GeneProduct :LOC_Os01g72370 basic/helix-loop-helix 56 ATP synthetase a GeneProduct :LOC_Os02g54624 SPP2 GeneProduct :LOC_Os02g05030 sucrose-phosphatase 2 MADS 8 GeneProduct :LOC_Os09g32948 Also called MADS 24 SUS2 GeneProduct :LOC_Os06g09450 Sucrose synthase 2 Ubi GeneProduct :LOC_Os09g31031 MADS17 GeneProduct :LOC_Os04g49150 Also called NMADS3 and RMADS213 C3H1 GeneProduct :LOC_Os01g07930 Zinc finger CCCH domain-containing protein Glutaredoxin-related APL2 GeneProduct :LOC_Os01g44220 ADP-glucose Pyrophosphorylase large subunit 2, binding only happens with APS2b SSP genes examined was significantly suppressed in KD-RISBZ1/KD-RPBF expression diminished during grain filling at high temperatures Mitrochondrial carrier GeneProduct :LOC_Os03g11510 PGI-b GeneProduct :LOC_Os06g14510 MADS 22 GeneProduct :LOC_Os02g52340 Also called RMD1 GluC GeneProduct :LOC_Os02g15090 ISA1 GeneProduct :LOC_Os08g40930 expression diminished during grain filling at high temperatures E3-Ubi Ligase GeneProduct :LOC_Os05g47780 DUF151 GeneProduct :LOC_Os01g50622 PHOH GeneProduct :LOC_Os01g63270 Also called ALK SUS3 GeneProduct :LOC_Os07g42490 Sucrose synthase 3 Ring ZF GeneProduct :LOC_Os04g48050 APS2a GeneProduct :LOC_Os08g25734 Also called AGPS2, ADP-glucose Pyrophosphorylase small subunit 2; SSP genes examined was significantly suppressed in KD-RISBZ1/KD-RPBF has two different transcripts= a:in leaf, b:in endosperm; binding with APL2 and Down regulation by RISBZ1 only happens with APS2b, binding with APL1 only happens with APS2a expression diminished during grain filling at high temperatures Vin1 GeneProduct :LOC_Os04g45290 CIN4 GeneProduct :LOC_Os01g73580 RB GeneProduct :LOC_Os01g39580 seed coat color, endosperm color NAC4 GeneProduct :LOC_Os01g60020 MADS 15 GeneProduct :LOC_Os07g01820 Also called RAP1A ISA3 GeneProduct :LOC_Os09g29404 phosphomannomutase GeneProduct :LOC_Os06g28194 Soluble epoxide hydrolase CIN7 GeneProduct :LOC_Os09g08072 DAD1 GeneProduct :LOC_Os04g32550 Defender against cell death 1 double-stranded beta-helix domain GeneProduct :LOC_Os11g06370 MADS 16 GeneProduct :LOC_Os06g49840 Bam 3 GeneProduct :LOC_Os07g35880 IDI4 GeneProduct :LOC_Os09g28050 asparate aminotransferase UGP2 GeneProduct :LOC_Os02g02560 RPBF GeneProduct :LOC_Os02g15350 Functionaly redundant and compensatory expression between RISBZI and RPBF except for OsLKR/SDH double KD mutant (KD-RISBZ1/KD-RPBF) caused most expression change SAL1 GeneProduct :LOC_Os06g43590 Amy3D GeneProduct :LOC_Os08g36910 PPR bZIP GeneProduct :LOC_Os05g40320 Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) TyrK GeneProduct :LOC_Os11g15340 SAM dependent carboxyl methyltransferase LOC_Os06g14190 GeneProduct :LOC_Os06g14190 AP-1gamma-1 GeneProduct :LOC_Os06g07090 APS1 GeneProduct :LOC_Os09g12660 ADP-glucose Pyrophosphorylase small subunit 1  expression diminished during grain filling at high temperatures GF14b GeneProduct :LOC_Os04g38870 Amy1A GeneProduct :LOC_Os02g52710 RACK1A GeneProduct :LOC_Os01g49290 Also called GPB-LR/ RWD APT1 GeneProduct :LOC_Os12g39860 Adenine phosphoribosyltransferase 1 Bam 1 GeneProduct :LOC_Os10g41550 HOX6 GeneProduct :LOC_Os09g35910 Cooper et al. 2003 called this leucine zipper and misnamed HOX 22 as HOX 6 (22834) TLR31 GeneProduct :LOC_Os02g53400 Translational repressor MPT5/PUF4 PHOL GeneProduct :LOC_Os03g55090 LOC_Os10g30450 GeneProduct :LOC_Os10g30450 Unknown-UniProt ID APL3 GeneProduct :LOC_Os03g52460 Sci2 GeneProduct :LOC_Os01g42860 psbC GeneProduct :LOC_Os02g24632 beta-1,3-Glucanase GeneProduct :LOC_Os03g25790 Isocitrate lyase GeneProduct :LOC_Os07g34520 MADS 57 GeneProduct :LOC_Os02g49840 LOC_Os05g06330 GeneProduct :LOC_Os05g06330 PUP2 GeneProduct :LOC_Os06g46740 Oryzain gamma Protease GeneProduct :LOC_Os09g27030 EF-1-g GeneProduct :LOC_Os02g12800 eEF-1G RISBZ1 GeneProduct :LOC_Os07g08420 Functionaly redundant and compensatory expression between RISBZI and RPBF. Double Knock-Down mutant (KD-RISBZ1/KD-RPBF) caused most expression change in OsLKR/SDH bip110 GeneProduct :LOC_Os06g08530 Putative ubiquitin-specific protease 23, BRI1-KD interacting protein 110 SUT4 GeneProduct :LOC_Os02g58080 Flavin containing monooxygenase 3-like GeneProduct :LOC_Os09g37620 Serine/threonine protein kinase Ghd7 GeneProduct :LOC_Os07g15770 yield potential Wsi18 GeneProduct :LOC_Os01g50910 Interaction with TRAB1 and VP1 by orthology to H vulgare ABA and GA induced water stress + cold stress member of the group 3 Lea family Wsi18 promoter is active in the whole grain PGI-a GeneProduct :LOC_Os09g29070 Wx1 GeneProduct :LOC_Os06g04200 30% less pre-mRNA in du1 mutant line Granule-bound starch synthase expression diminished during grain filling at high temperatures GPT-A GeneProduct :LOC_Os05g07670 Assigned as GPT-A by Nemeth D and Hanumappa M (10/21/2010) MADS 14 GeneProduct :LOC_Os03g54160 Also called AGL10, RAP1B ABI5 GeneProduct :LOC_Os01g64000 AOXDH GeneProduct :LOC_Os03g31550 Serine protease GeneProduct :LOC_Os04g45910 Os04g0542900, VP2-like GeneProduct :LOC_Os03g05750 RAR1 GeneProduct :LOC_Os02g33180 SUT1 GeneProduct :LOC_Os03g07480 Flavin-containing monooxygenase GeneProduct :LOC_Os01g15540 CSN5 GeneProduct :LOC_Os04g56070 PROLM 24 GeneProduct :LOC_Os06g31070 16 kDa Prolamin Importin alpha-1a GeneProduct :LOC_Os01g14950 NLS RECEPTOR APRL3 GeneProduct :LOC_Os02g51850 Disulfide Isomerase RAC GeneProduct :LOC_Os01g12900 LOC_Os02g08530 GeneProduct :LOC_Os02g08530 Protein Kinase-UniProt ID Anthranilate Phosphoribosyltransferase GeneProduct :LOC_Os03g03450 Amy3B/Amy3C GeneProduct :LOC_Os09g28420 DU1 GeneProduct :LOC_Os10g35550 dull endosperm-1 Sci2 GeneProduct :LOC_Os01g42860 Centromere protein GeneProduct :LOC_Os03g20580 PIP5K GeneProduct :LOC_Os02g57660 Putative phosphatidylinositol-4-phosphate 5-kinase REB GeneProduct :LOC_Os03g58250 Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) Lea3 GeneProduct :LOC_Os05g46480 Interaction with TRAB1 and VP1 by orthology to H vulgare ABA related DPK4 GeneProduct :LOC_Os06g45300 Ser/thr/tyr kinase LOC_Os10g40260 GeneProduct :LOC_Os10g40260 Luc7-like 2 GeneProduct :LOC_Os03g62640 Sarcoplasmic reticulum Jasmonate-induced protein GeneProduct :LOC_Os12g09700 Histone H3 (Lys9) methyltransferase OsEM GeneProduct :LOC_Os05g28210 SBEIIa GeneProduct :LOC_Os04g33460 expression diminished during grain filling at high temperatures Ankyrin-like protein GeneProduct :LOC_Os09g17329 Iron transporter Vin 2 GeneProduct :LOC_Os02g01590 Bam 10 GeneProduct :LOC_Os03g22790 ALDP GeneProduct :LOC_Os11g07020 Aldolase GluA-1 GeneProduct :LOC_Os01g55690 RCAA1 GeneProduct :LOC_Os11g47970 RuBisCO activase large isoform PPDKB GeneProduct :LOC_Os05g33570 CPDK1, PPDKB PSI-D GeneProduct :LOC_Os08g44680 SSIVa GeneProduct :LOC_Os01g52250 Also called ALK LOC_Os03g03860 GeneProduct :LOC_Os03g03860 Unknown-UniProt ID PBZ1 GeneProduct :LOC_Os12g36880 SSA2 GeneProduct :LOC_Os03g55730 10 kDa prolamin precursor LOC_Os03g43910 GeneProduct :LOC_Os03g43910 MADS5 GeneProduct :LOC_Os06g06750 GLN1-1 GeneProduct :LOC_Os02g50240 Glutamine synthetase cytosolic isozyme 1-1, also called RGS28 and GS1;1 MPK5 GeneProduct :LOC_Os03g17700 UniProt:MPK3, BIMK1, MAP3, MAPK2, MPK5 HDS1 GeneProduct :LOC_Os02g39160 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1 SCR-like GeneProduct :LOC_Os02g45760 Scarecrow transcriptional regulator-like protein CYP450 GeneProduct :LOC_Os10g08474 AP2 transcription factor TRAB1 GeneProduct :LOC_Os08g36790 Interaction with Wsi18 and Lea3 by orthology to H vulgare bZIP transcription factor TRAB1, ABA RESPONSIVE ELEMENT 1=ABA1 YSL15 GeneProduct :LOC_Os02g43410 YELLOW STRIPE LIKE 15 ferroportin1 GeneProduct :LOC_Os06g36450 LOC_Os03g55130 GeneProduct :LOC_Os03g55130 Bam 9 GeneProduct :LOC_Os02g03690 Photosystem I RC subunit GeneProduct :LOC_Os07g05480 SSI GeneProduct :LOC_Os06g06560 EXPB2 GeneProduct :LOC_Os10g40710 Stress-related protein GeneProduct :LOC_Os07g47510 Bam 8 GeneProduct :LOC_Os01g13550 Phospholipase C GeneProduct :LOC_Os07g49330 SUT5 GeneProduct :LOC_Os02g36700 INV3 GeneProduct :LOC_Os02g32730 Neutral/alkaline invertase 3 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) Delta-COP GeneProduct :LOC_Os01g61710 Delta coatamer SSII-2 GeneProduct :LOC_Os02g51070 Also called ALK Terpene cyclases GeneProduct :LOC_Os04g27190 MCM2 GeneProduct :LOC_Os11g29380 Rab21 GeneProduct :LOC_Os11g26790 ABA related water stress + cold stress CML18 GeneProduct :LOC_Os05g13580 GF14c GeneProduct :LOC_Os08g33370 UGP1 GeneProduct :LOC_Os09g38030 FDH GeneProduct :LOC_Os02g57040 Alcohol dehydrogenase class 3; Also called FALDH, GSH-FDH (Glutathione-dependent formaldehyde dehydrogenase) LOC_Os05g50190 GeneProduct :LOC_Os05g50190 Protein Kinase-UniProt ID LOC_Os04g41910 GeneProduct :LOC_Os04g41910 RIR 1b GeneProduct :LOC_Os05g48260 CPL1 GeneProduct :LOC_Os07g10690 Seed Shattering FBO10 GeneProduct :LOC_Os11g34460 Adagio-like protein 3 Cytochrome P450 OsCCP GeneProduct :LOC_Os12g08760 Assigned as OsCCP by Nemeth D and Hanumappa M (10/21/2010) carboxyvinyl-carboxyphosphonate phosphorylmutase JA cmtr GeneProduct :LOC_Os06g22440 Putative S-adenosyl-L-methionine Subtilisin N-terminal Region ISA2 GeneProduct :LOC_Os05g32710 Bam 6 GeneProduct :LOC_Os09g39570 PROLM28 GeneProduct :LOC_Os12g16890 Prolamin precursor, protein also called PPROL 17 Pumilio GeneProduct :LOC_Os12g31000 Leucine rich repeat IRT1 GeneProduct :LOC_Os03g46470 Oligopeptide transporter 3 GeneProduct :LOC_Os03g54000 Isp4-like MADS-box IL GeneProduct :LOC_Os02g54080 ATP synthase GeneProduct :LOC_Os03g17070 GluB-1A GeneProduct :LOC_Os02g15169 UniProt ID: P14323 MLA10 GeneProduct :LOC_Os11g16470 Ankyrin repeat RPK-TMK1 precursor GeneProduct :LOC_Os04g58910 receptor protein kinase TMK1 precursor MADS 2 GeneProduct :LOC_Os01g66030 LOC_Os12g37570 GeneProduct :LOC_Os12g37570 Protein Kinase-UniProt ID DIP1 GeneProduct :LOC_Os05g34070 EBP89 GeneProduct :LOC_Os03g08460 Also called EREBP1 SUT2 GeneProduct :LOC_Os12g44380 CycB1;1 GeneProduct :LOC_Os01g59120 Seed Shattering SPP1 GeneProduct :LOC_Os01g27880 sucrose-phosphatase 1 S-REP GeneProduct :LOC_Os04g47990 bhlh113 GeneProduct :LOC_Os10g40740 basic/helix-loop-helix 113 APL1 GeneProduct :LOC_Os05g50380 ADP-glucose Pyrophosphorylase large subunit 1 CTR1-like GeneProduct :LOC_Os09g39320 Multitransmembrane protein DREB1B GeneProduct :LOC_Os09g35010 RUBQ1 GeneProduct :LOC_Os02g06640 Also called Polyubiquitin 6 Also given LOC_Os05g42424 which is not complete NADPH G-3-P dh GeneProduct :LOC_Os08g34210 Sdr4 GeneProduct :LOC_Os07g39700 Ring Finger GeneProduct :LOC_Os01g01390 SSIIc GeneProduct :LOC_Os10g30156 Also called ALK LOC_Os04g57020 GeneProduct :LOC_Os04g57020 PSII-OEP33 GeneProduct :LOC_Os01g31690 No symbol in gramene so OEP33 was assigned. 33kDa oxygen evolving protein of photosystem II LOC_Os04g53350 GeneProduct :LOC_Os04g53350 Cooper 31122 ID CRINKLY4 GeneProduct :LOC_Os08g28710 RAG-1 GeneProduct :LOC_Os09g16260 RISBZ1 + RPBF activated the RAG-1 promoter greater than RPBF alone, though RISBZ1 did not independently affect promoter activity CR4 GeneProduct :LOC_Os03g43670 homology with Crinkly4 SSA1 GeneProduct :LOC_Os05g41970 26 kDa alpha globulin TATC GeneProduct :LOC_Os01g31680 DPE1 GeneProduct :LOC_Os07g43390 LOC_Os02g53890 GeneProduct :LOC_Os02g53890