Zebrafish Experimental Conditions Ontology
type: Ontology
version IRI: zeco.owl
description: Ontology of Zebrafish Experimental Conditions
license: https://creativecommons.org/licenses/by/3.0/
default-namespace: zebrafish_experimental_conditions_ontology
version info: 2022-02-14

definition
type: AnnotationProperty
IAO_0000114: IAO_0000122

term replaced by
type: AnnotationProperty
IAO_0000114: IAO_0000125

ZECO_AGR_slim
type: AnnotationProperty
sub property of: subset_property

upper level
type: AnnotationProperty
comment: abstract upper-level terms not directly useful for analysis
sub property of: subset_property

subset_property
type: AnnotationProperty

consider
type: AnnotationProperty

database_cross_reference
type: AnnotationProperty

has_exact_synonym
type: AnnotationProperty

has_obo_format_version
type: AnnotationProperty

has_obo_namespace
type: AnnotationProperty

in_subset
type: AnnotationProperty

shorthand
type: AnnotationProperty

part of
type: ObjectProperty
inverse of: has part
type: TransitiveProperty
IAO_0000111: is part of
IAO_0000112: my brain is part of my body (continuant parthood, two material entities)
IAO_0000112: my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)
IAO_0000112: this day is part of this year (occurrent parthood)
definition: a core relation that holds between a part and its whole
IAO_0000116: Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other.
IAO_0000116: Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/
IAO_0000116: Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.) A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'.
IAO_0000118: part_of
RO_0001900: RO_0001901
RO_0040042: BFO_0000002
RO_0040042: BFO_0000003
RO_0040042: BFO_0000004
RO_0040042: BFO_0000017
RO_0040042: BFO_0000019
RO_0040042: BFO_0000020
RO_0040042: BFO_0000031
in_subset: valid for go annotation extension
in_subset: valid for go gp2term
in_subset: valid for go ontology
in_subset: valid for gocam

has part
type: ObjectProperty
type: TransitiveProperty
IAO_0000111: has part
IAO_0000112: my body has part my brain (continuant parthood, two material entities)
IAO_0000112: my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)
IAO_0000112: this year has part this day (occurrent parthood)
definition: a core relation that holds between a whole and its part
IAO_0000116: Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part.
IAO_0000116: Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/
IAO_0000116: Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.) A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'.
IAO_0000118: has_part
RO_0001900: RO_0001901
in_subset: valid for go annotation extension
in_subset: valid for go ontology
in_subset: valid for gocam

regulates
type: ObjectProperty
type: TransitiveProperty
IAO_0000114: IAO_0000125
definition: process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2.
IAO_0000116: We use 'regulates' here to specifically imply control. However, many colloquial usages of the term correctly correspond to the weaker relation of 'causally upstream of or within' (aka influences). Consider relabeling to make things more explicit
IAO_0000117: Chris Mungall
IAO_0000117: David Hill
IAO_0000117: Tanya Berardini
IAO_0000119: causal-relations
IAO_0000119: GO
IAO_0000232: Regulation precludes parthood; the regulatory process may not be within the regulated process.
IAO_0000589: regulates (processual)
IAO_0000600: false
in_subset: valid for go annotation extension
in_subset: valid for go ontology
in_subset: valid for gocam

conditions
type: Class
definition: The state in which an organism exists.

control conditions
type: Class
subclass of: conditions
definition: Condition which serves as a standard against which experimental conditions can be compared.
in_subset: ZECO_AGR_slim

generic control
type: Class
subclass of: control conditions
definition: Control condition in which the conditions of the organism in the control experiment are not standard but are being used as the condition against which the experimental condition is compared.
has_exact_synonym: innocuous condition

standard conditions
type: Class
subclass of: conditions
definition: Experimental condition that is the standard environment for zebrafish husbandry, as described in ‘The Zebrafish Book’. In general the standard environment utilizes contaminant free tank water, heated to 28.5 degrees C, with the fish fed a normal contaminant free diet, with standard osmolarity, pH, and normal light cycle of 14hr light/10hr dark.
in_subset: ZECO_AGR_slim

experimental conditions
type: Class
subclass of: conditions
definition: Condition in which variables of the experiment are manipulated to determine the variables effect by comparing to a control condition.
in_subset: ZECO_AGR_slim

biological treatment
type: Class
subclass of: experimental conditions
definition: Experimental condition in which the organism is treated with a microorganism.
in_subset: ZECO_AGR_slim

bacterial treatment
type: Class
subclass of: biological treatment
definition: Biological treatment in which fish have been infected with bacteria. This infection can be done by addition of bacteria in the water or by injection of bacteria, (for example in the brain ventricle, in the caudal vein, in the yolk sac), or ingestion, or other means.

fungal treatment
type: Class
subclass of: biological treatment
definition: Biological treatment in which fish have been infected with a fungus.

germ free
type: Class
subclass of: biological treatment
definition: Biological treatment in which fish were raised in the absence of bacteria.

protozoan treatment
type: Class
subclass of: biological treatment
definition: Biological treatment in which fish have been infected with protozoa.

viral treatment
type: Class
subclass of: biological treatment
definition: Biological treatment in which fish have been infected with a virus.

chemical treatment
type: Class
subclass of: experimental conditions
definition: Experimental condition in which the fish is treated with a chemical substance. This treatment could be administered by adding the chemical substance to the tank water, injections, or by consumption.
in_subset: ZECO_AGR_slim

diet
type: Class
subclass of: experimental conditions
definition: Experimental condition where the food of the zebrafish is manipulated in some way.
in_subset: ZECO_AGR_slim

food availability
type: Class
subclass of: experimental conditions
definition: Experimental condition in which the availability of food is manipulated.
in_subset: ZECO_AGR_slim

fasting
type: Class
subclass of: limited food availability
definition: Limited food availability condition in which there is no food provided.

limited food availability
type: Class
subclass of: food availability
definition: Food availability condition in which food is provided in limited supply.

unlimited food availability
type: Class
subclass of: increased food availability
definition: Food availability condition in which food is available in unlimited supply.

food content
type: Class
subclass of: diet
definition: Diet condition in which the contents of the food is manipulated.

cholesterol content
type: Class
subclass of: food content
definition: Food content condition in which the amount of cholesterol in the diet is manipulated.

high cholesterol
type: Class
subclass of: cholesterol content
definition: Cholesterol content condition in which the amount of cholesterol in the diet is elevated.

low cholesterol
type: Class
subclass of: cholesterol content
definition: Cholesterol content condition in which the amount of cholesterol in the diet is reduced.

fat content
type: Class
subclass of: food content
definition: Food content condition in which the amount of fat in the diet is manipulated.

high fat
type: Class
subclass of: fat content
subclass of: nutrient increased
definition: Fat content condition in which the amount of fat in the diet is elevated.

high saturated fat
type: Class
subclass of: high fat
definition: High fat condition in which the amount of saturated fat in the diet is elevated.

high monounsaturated fat
type: Class
subclass of: high fat
definition: High fat condition in which the amount of monounsaturated fat in the diet is elevated.

low fat
type: Class
subclass of: fat content
subclass of: nutrient decreased
definition: Fat content condition in which the amount of fat in the diet is reduced.

low trans fat
type: Class
subclass of: low fat
definition: Low fat condition in which the amount of trans fat in the diet is reduced.

low polyunsaturated fat
type: Class
subclass of: low fat
definition: Low fat condition in which the amount of polyunsaturated fat in the diet is reduced.

protein content
type: Class
subclass of: food content
definition: Food content condition in which the amount of protein in the diet is manipulated.

high protein
type: Class
subclass of: protein content
subclass of: nutrient increased
definition: Protein content condition in which the protein in the diet is elevated.

low protein
type: Class
subclass of: protein content
subclass of: nutrient decreased
definition: Protein content condition in which the protein in the diet is reduced.

stress
type: Class
subclass of: experimental conditions
in_subset: ZECO_AGR_slim

high sugar
type: Class
subclass of: high carbohydrate
definition: High carbohydrate conditions in which the amount of sugar in the diet is elevated.

high fructose
type: Class
subclass of: high sugar
definition: High sugar condition in which the amount of fructose in the diet is elevated.

high glucose
type: Class
subclass of: high sugar
definition: High sugar condition in which the amount of glucose in the diet is elevated.

high sucrose
type: Class
subclass of: high sugar
definition: High sugar condition in which the amount of sucrose in the diet is elevated.

low sugar
type: Class
subclass of: low carbohydrate
definition: High carbohydrate conditions in which the amount of sugar in the diet is reduced.

low sucrose
type: Class
subclass of: low sugar
definition: Low sugar condition in which the amount of sucrose in the diet is reduced.

low fructose
type: Class
subclass of: low sugar
definition: Low sugar condition in which the amount of fructose in the diet is reduced.

low glucose
type: Class
subclass of: low sugar
definition: Low sugar condition in which the amount of glucose in the diet is reduced.

housing conditions
type: Class
subclass of: experimental conditions
definition: Experimental condition that manipulates the enclosure of the fish.
in_subset: ZECO_AGR_slim

open roofed
type: Class
subclass of: housing conditions
definition: Housing condition in which the roof of the enclosure if open.

overcrowding
type: Class
subclass of: housing conditions
definition: Housing condition in which the enclosure of the fish is overcrowded, containing an excess of fish that reduces the available space of the enclosure.
has_exact_synonym: high density

in vitro culture
type: Class
subclass of: experimental conditions
definition: Experimental condition in which components of the fish have been removed and are maintained separately.
in_subset: ZECO_AGR_slim

organ culture
type: Class
subclass of: in vitro culture
definition: In vitro culture condition in which an organ is dissected/isolated/collected from the fish and placed in culture. The analysis of the experiment is done on this organ in culture.

primary cell culture
type: Class
subclass of: in vitro culture
definition: In vitro culture condition in which an embryo or adult fish is dissociated to a single cell suspension. The analysis is made on this cell culture.

lighting conditions
type: Class
subclass of: experimental conditions
definition: Experimental condition in which the intensity, wavelength, and/or duration of illumination is (are) different from the one in controlled conditions.
in_subset: ZECO_AGR_slim

light duration
type: Class
subclass of: lighting conditions

altered light dark cycle
type: Class
subclass of: light duration

constant dark
type: Class
subclass of: light duration

constant light
type: Class
subclass of: light duration

light intensity
type: Class
subclass of: lighting conditions

high light intensity
type: Class
subclass of: light intensity

low light intensity
type: Class
subclass of: light intensity

gravity
type: Class
subclass of: experimental conditions
definition: Experimental condition in which gravity forces are manipulated. For zebrafish, this can be in the form of centrifugal forces or trips to outerspace.
in_subset: ZECO_AGR_slim

mechanical stress
type: Class
subclass of: stress
definition: Experimental condition in which an external mechanical force is applied to the fish or part of the fish.

vibration
type: Class
subclass of: mechanical stress

water flow
type: Class
subclass of: mechanical stress

circular flow
type: Class
subclass of: water flow

through flow
type: Class
subclass of: water flow

temperature exposure
type: Class
subclass of: experimental conditions
definition: Experimental condition in which the zebrafish is exposed to an increased or decreased temperature.
in_subset: ZECO_AGR_slim

stable temperature exposure
type: Class
subclass of: temperature exposure
definition: Temperature exposure condition in which fish are raised in temperature different (lower or higher) than the controlled temperature. The standard controlled temperature (according to the zebrafish book) is 28.5 degrees C.

cold exposure
type: Class
subclass of: stable temperature exposure
definition: Temperature exposure condition in which fish are raised in temperature that is lower than the controlled temperature. The standard controlled temperature (according to the zebrafish book) is 28.5 degrees C.

heat exposure
type: Class
subclass of: stable temperature exposure
definition: Temperature exposure condition in which fish are raised in temperature that is higher than the controlled temperature. The standard controlled temperature (according to the zebrafish book) is 28.5 degrees C.

temperature shock
type: Class
subclass of: temperature exposure
definition: Temperature exposure condition in which fish are subjected for a short period of time to temperature that is lower or higher than the controlled temperature. The standard controlled temperature (according to the zebrafish book) is 28.5 degrees C.

cold shock
type: Class
subclass of: temperature shock
definition: Temperature shock condition in which fish are subjected for a short period of time to temperature lower than the controlled temperature. The standard controlled temperature (according to the zebrafish book) is 28.5 degrees C.

heat shock
type: Class
subclass of: temperature shock
definition: Temperature shock condition in which fish are subjected for a short period of time to temperature higher than the controlled temperature. The standard controlled temperature (according to the zebrafish book) is 28.5 degrees C.

ablation
type: Class
subclass of: physical alteration
definition: Targeted destruction of an anatomical structure.

chemical ablation
type: Class
subclass of: ablation
definition: Experimental condition which uses a chemical to ablate an anatomical structure or cell.

light ablation
type: Class
subclass of: ablation
subclass of: light damage
definition: Experimental condition which uses focused light to ablate an anatomical structure or cell.

resection
type: Class
subclass of: surgical manipulation
definition: Surgical manipulation in which a particular organ, appendage, or part of an organism is removed.

amputation
type: Class
subclass of: resection
definition: Resection condtion in which all or part of an extremity such as the fin or tail are removed.

vaccine treatment
type: Class
subclass of: biological treatment
definition: Biological treatment in which the organism is treated with a substance to stimulate the production of antibodies and provide immunity against one or several diseases.

laceration
type: Class
subclass of: physical alteration
definition: Experimental condition in which there is a deep cut or tear of the flesh.

surgical manipulation
type: Class
subclass of: physical alteration
definition: Experimental condition that involves manual or instrumental techniques to alter anatomical structures.

xenotransplantation
type: Class
subclass of: biological treatment
definition: Experimental condition in which living cells or tissues from one species are transplanted into another.

perforation
type: Class
subclass of: physical alteration
definition: Experimental condition in which a hole or break in the membranes of an organ or structure of the body is created.

abrasion
type: Class
subclass of: physical alteration
definition: Experimental condition that results in superficial damage of tissue such that it is scraped or worn away.

contusion
type: Class
subclass of: physical alteration
definition: Experimental condition that results in hematoma of tissue in which capillaries and sometimes venules are damaged by trauma, allowing blood to seep, hemorrhage, or extravasate into the surrounding interstitial tissues. (https://en.wikipedia.org/wiki/Bruise)

transection
type: Class
subclass of: surgical manipulation
definition: Cutting transversly of an organ or tissue. Type of cutting often used to divide the spinal cord to investigate neural regeneration in zebrafish.

water quality
type: Class
subclass of: experimental conditions
definition: Experimental condition in which a chemical or physical characteristic of water is altered.
in_subset: ZECO_AGR_slim

gas composition
type: Class
subclass of: water quality
comment: Water quality condition that alters the concentration of atmospheric gases in water.

carbon dioxide content
type: Class
subclass of: gas composition
definition: A gas composition condition that alters the concentraion of carbion dioxide.

hypercapnia
type: Class
subclass of: carbon dioxide content

hypocapnia
type: Class
subclass of: carbon dioxide content

oxygen content
type: Class
subclass of: gas composition
definition: A gas composition condition that alters the concentraion of oxygen.

hyperoxia
type: Class
subclass of: oxygen content
definition: An oxygen content with high concentration of oxygen.

hypoxia
type: Class
subclass of: oxygen content
definition: An oxygen content with low concentration of oxygen.

ion composition
type: Class
subclass of: water quality

modified calcium composition
type: Class
subclass of: ion composition

high calcium
type: Class
subclass of: modified calcium composition

low calcium
type: Class
subclass of: modified calcium composition

modified potassium composition
type: Class
subclass of: ion composition

high potassium
type: Class
subclass of: modified potassium composition

low potassium
type: Class
subclass of: modified potassium composition

modified sodium composition
type: Class
subclass of: ion composition

high sodium
type: Class
subclass of: modified sodium composition

low sodium
type: Class
subclass of: modified sodium composition

pH
type: Class
subclass of: ion composition

acidic
type: Class
subclass of: pH
definition: Experimental condition in which the pH of the water is lower than the pH of the controlled conditions.

basic
type: Class
subclass of: pH
definition: Experimental condition in which the pH of the water is higher than the pH of the controlled conditions.

water salinity
type: Class
subclass of: water quality

hypertonic
type: Class
subclass of: water salinity
definition: Experimental condition in which the salt concentration is higher than the one in controlled conditions.

hypotonic
type: Class
subclass of: water salinity
definition: Experimental condition in which the salt concentration is lower than the one in controlled conditions.

isotonic
type: Class
subclass of: water salinity

stable
type: Class
subclass of: water salinity

radiation
type: Class
subclass of: experimental conditions
in_subset: ZECO_AGR_slim

electromagnetic radiation
type: Class
subclass of: radiation

radio waves
type: Class
subclass of: electromagnetic radiation

microwaves
type: Class
subclass of: electromagnetic radiation

infared
type: Class
subclass of: electromagnetic radiation

visible light
type: Class
subclass of: electromagnetic radiation
definition: Electromagnetic radiation with a wavelength from 400 nm to 700 nm. Visible light referes to the light which is visible to the human eye and is responsible fo the sense of sight.

Axiom
annotated source: visible light
annotated property: definition
annotated target: Electromagnetic radiation with a wavelength from 400 nm to 700 nm. Visible light referes to the light which is visible to the human eye and is responsible fo the sense of sight.
database_cross_reference: https://en.wikipedia.org/wiki/Light

ultraviolet light
type: Class
subclass of: electromagnetic radiation
definition: Electromagnetic radiation with a wavelength from 10 nm to 400nm. Long-wavelength ultraviolet radiation can cause chemical reactions and causes many substances to glow or fluoresce.
has_exact_synonym: UV
has_exact_synonym: UV light

Axiom
annotated source: ultraviolet light
annotated property: definition
annotated target: Electromagnetic radiation with a wavelength from 10 nm to 400nm. Long-wavelength ultraviolet radiation can cause chemical reactions and causes many substances to glow or fluoresce.
database_cross_reference: https://en.wikipedia.org/wiki/Ultraviolet

x-ray
type: Class
subclass of: electromagnetic radiation

gamma ray
type: Class
subclass of: electromagnetic radiation

particle radiation
type: Class
subclass of: radiation

proton
type: Class
subclass of: particle radiation

neutron
type: Class
subclass of: particle radiation

acoustic radiation
type: Class
subclass of: radiation

alpha particle
type: Class
subclass of: particle radiation

electromagnetic field
type: Class
subclass of: experimental conditions
definition: Experimental condition in which the fish is exposed to a physical field that is produced by electrically charged objects.
in_subset: ZECO_AGR_slim

electric field
type: Class
subclass of: electromagnetic field
definition: Experimental condition where the fish is exposed to materials that produce an electric field.

magnetic field
type: Class
subclass of: electromagnetic field
definition: Experimental condition where the fish is exposed to magnetic materials.

high polysunsaturated fat
type: Class
subclass of: high fat
definition: High fat condition in which the amount of polyunsaturated fat in the diet is elevated.

high trans fat
type: Class
subclass of: high fat
definition: High fat condition in which the amount of trans fat in the diet is elevated.

low saturated fat
type: Class
subclass of: low fat
definition: Low fat condition in which the amount of saturated fat in the diet is reduced.

low monounsaturated fat
type: Class
subclass of: low fat
definition: Low fat condition in which the amount of monounsaturated fat in the diet is reduced.

physical alteration
type: Class
subclass of: experimental conditions
definition: Experimental condition in which an anatomical structure, cell, or organ has sustained targeted physical change, usually through the use of an instrument.
in_subset: ZECO_AGR_slim

bacterial treatment by injection
type: Class
subclass of: bacterial treatment
definition: Bacterial treatment where the bacteria are injected into the fish.

bacterial treatment by exposure to environment
type: Class
subclass of: bacterial treatment
definition: Bacterial treatment where the bacteria are introduced via the environment. For zebrafish this is the tank water.

fungal treatment by injection
type: Class
subclass of: fungal treatment
definition: Fungal treatment where the fungus is injected into the fish.

fungal treatment by exposure to environment
type: Class
subclass of: fungal treatment
definition: Fungal treatment where the fungus is introduced via the environment. For zebrafish this is the tank water.

viral treatment by exposure to environment
type: Class
subclass of: viral treatment
definition: Viral treatment where the virus is introduced via the environment. For zebrafish this is the tank water.

viral treatment by injection
type: Class
subclass of: viral treatment
definition: Viral treatment where the virus is injected into the fish.

cancer xenotransplantation
type: Class
subclass of: xenotransplantation
definition: Xenotransplantation condition in which cancer cells are injected or grafted into the zebrafish.

chemical treatment by injection
type: Class
subclass of: chemical treatment
definition: Chemical treatment in which the chemical is injected into the zebrafish.

chemical treatment by environment
type: Class
subclass of: chemical treatment
definition: Chemical treatment condition in which the chemical is introduced through the environment. For zebrafish this is the tank water.

chemical treatment by diet
type: Class
subclass of: chemical treatment
subclass of: diet
definition: Chemical treatment condition in which the chemical is introduced through the diet.

carbohydrate content
type: Class
subclass of: food content
definition: Food content condition in which the amount of carbohydrate in the diet is manipulated.

high carbohydrate
type: Class
subclass of: carbohydrate content
subclass of: nutrient increased
definition: Food content condtion in which the amount of carbohydrate in the diet is elevated.

low carbohydrate
type: Class
subclass of: carbohydrate content
subclass of: nutrient decreased
definition: Food content condtion in which the amount of carbohydrate in the diet is reduced.

stress by handling
type: Class
subclass of: stress

ultrasound
type: Class
subclass of: vibration
definition: Mechanical stress condition where the organism is subjected to vibrations having an ultrasonic frequency.

light damage
type: Class
subclass of: physical alteration
definition: Physical alteration which uses light to damage the anatomical structure, cell, or organ.

undercrowding
type: Class
subclass of: housing conditions
definition: Housing condition in which the enclosure of the fish is undercrowded,containing a low amount of fish that increases the available space of the enclosure.
has_exact_synonym: low density

increased food availability
type: Class
subclass of: food availability
definition: Food availability condition in which food is provided in increased supply.
has_exact_synonym: overfeeding

cold damage
type: Class
subclass of: physical alteration
definition: Physical alteration which uses cold to damage an anatomical structure, cell, or organ

cryoablation
type: Class
subclass of: ablation
subclass of: cold damage
definition: Experimental condition which uses a cold instrument to ablate an anatomical structure or cell.

nutrient decreased
type: Class
subclass of: food content
definition: Food content condition in which levels of a nutrient are decreased relative to standard diet.

nutrient increased
type: Class
subclass of: food content
definition: Food content condition in which levels of a nutrient are increased relative to standard diet.

feeding regime
type: Class
subclass of: experimental conditions
definition: Experimental condition that manipulates the frequency or way an organism is fed.
in_subset: ZECO_AGR_slim

gavage
type: Class
subclass of: feeding regime
definition: Feeding regime in which food, drugs, or other substances are administered by force, typically through a tube leading down the throat to the stomach.

bacterial treatment by gavage
type: Class
subclass of: bacterial treatment
subclass of: gavage
definition: Bacterial treatment condition where bacteria are introduced to the organism by gavage.

chemical treatment by gavage
type: Class
subclass of: chemical treatment
subclass of: gavage
definition: Chemical treatment condition where the chemical is introduced to the organism by gavage.

bacterial treatment by diet
type: Class
subclass of: bacterial treatment
definition: Bacterial treatment where bacteria are introduced via the diet.

cauterization
type: Class
subclass of: physical alteration
definition: Condition that uses a cold or hot insturment, electrical current, or chemical to burn or dissolve an anatomical structure to remove or close it off.

thermal cauterization
type: Class
subclass of: cauterization
definition: Cauterization of a tissue using a heated instrument.

compression injury
type: Class
subclass of: physical alteration
definition: An injury that occurs because of pressure from a heavy object onto a body part. A compression injury may also arise from squeezing of a body part between two objects. https://www.medicinenet.com/crush_injury/definition.htm
has_exact_synonym: crush injury

probiotic content
type: Class
subclass of: food content
definition: Food content condition in which the amount of probiotics in the diet is manipulated

microgravity
type: Class
subclass of: gravity
definition: Experimental condition in which gravity forces are smaller than in control conditions. An example of a microgravity condition would be trips to outerspace.

increased gravity
type: Class
subclass of: gravity
definition: Experimental condition in which gravity forces are greater than in control conditions. An example of an increased gravity condition would be the application of centrifugal forces.