{
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  {
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   "source": [
    "# PYGAMD tutorials and examples"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Welcome to use [PYGAMD](http://pygamd.com/) for MD simulations. Here are some tutorials and examlples for doing exercises. Jupyter notebook files are available from [github](https://github.com/youliangzhu/pygamd-v1/tree/main/tutorials)."
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Installation\n",
    "Please see the [documentation](https://pygamd-v1.readthedocs.io/en/latest/) to know the features of PYGAMD. Following the [guide](https://pygamd-v1.readthedocs.io/en/latest/installation.html) for installation and usage. "
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Tutorials \n",
    "- **Dissipative Particle Dynamic Simulation**\n",
    "    - [Diblock-polymer](dpd_diblock-polymer.ipynb)\n",
    "- **General Molecular Dynamics simulation**\n",
    "    - [LJ-liquid](md_lj_liquid.ipynb)\n",
    "- **Self-Defined Potentials for Simulation**\n",
    "    - [Example](example.ipynb)"
   ]
  },
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