toricdomainvolumetric.cpp File Reference

#include <iostream>
#include <iomanip>
#include "DGtal/base/Common.h"
#include "DGtal/helpers/StdDefs.h"
#include "DGtal/io/colormaps/GrayscaleColorMap.h"
#include "DGtal/io/colormaps/HueShadeColorMap.h"
#include "DGtal/io/colormaps/TickedColorMap.h"
#include "DGtal/io/colormaps/GradientColorMap.h"
#include "DGtal/io/boards/Board2D.h"
#include "DGtal/images/ImageSelector.h"
#include "DGtal/images/SimpleThresholdForegroundPredicate.h"
#include "DGtal/geometry/volumes/distance/DistanceTransformation.h"
#include <boost/algorithm/minmax_element.hpp>

Include dependency graph for toricdomainvolumetric.cpp:

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Functions
int	main ()

Detailed Description

This program is free software: you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.

Author

David Coeurjolly (david.nosp@m..coe.nosp@m.urjol.nosp@m.ly@l.nosp@m.iris..nosp@m.cnrs.nosp@m..fr ) Laboratoire d'InfoRmatique en Image et Systèmes d'information - LIRIS (CNRS, UMR 5205), CNRS, France

Date

2016/10/17

An example file named toricdomainvolumetric. The aim of this example is to demonstrate the volumetric analysis functions on toric domains.

This file is part of the DGtal library.

Definition in file toricdomainvolumetric.cpp.

Function Documentation

main()

int main

(

void

)

[DTDef]

[DTDef]

[DTPredicate]

[DTPredicate]

[DTComputeToric]

[DTComputeToric]

[DTComputePartialToric]

[DTComputePartialToric]

[DTColormaps]

[DTColormaps]

Definition at line 61 of file toricdomainvolumetric.cpp.

{
 
  using namespace std;
  using namespace DGtal;
  using namespace Z2i;
 
  Point a ( 0, 0 );
  Point b ( 32, 16);
 
  //Input image with unsigned char values
  typedef ImageSelector<Domain, unsigned int>::Type Image;
  Image image ( Domain(a, b ));
 
  //We fill the image with the 128 value
  for ( Image::Iterator it = image.begin(), itend = image.end();it != itend; ++it)
    (*it)=128;
 
  //We add 3 seeds with 0 values.
  image.setValue(Point(16,2), 0);
  image.setValue(Point(2,11), 0);
  image.setValue(Point(30,15), 0);
 
  trace.beginBlock ( "Example toricdomainvolumetric" );
  //Input shape output
  typedef GrayscaleColorMap<Image::Value> Gray;
  Board2D board;
  board.setUnit ( LibBoard::Board::UCentimeter );
  Display2DFactory::drawImage<Gray>(board, image, (unsigned int)0, (unsigned int)129);
  board.saveSVG("toric-inputShape.svg");
 
  //Point Predicate from random seed image
  typedef functors::SimpleThresholdForegroundPredicate<Image> PointPredicate;
  PointPredicate predicate(image,0);
 
  typedef  DistanceTransformation<Space, PointPredicate, L2Metric> DTL2;
  typedef  DistanceTransformation<Space, PointPredicate, L2Metric> DTL2Toric;
 
  //Regular 2D domain
  DTL2 dtL2(image.domain(), predicate, l2Metric);
  //Full toric 2D domain
  DTL2Toric dtL2Toric(image.domain(), predicate, l2Metric, {{true, true}} );
 
  typedef  DistanceTransformation<Space, PointPredicate, L2Metric> DTL2ToricX;
  typedef  DistanceTransformation<Space, PointPredicate, L2Metric> DTL2ToricY;
 
  // 2D domain that is periodic along the first dimension.
  DTL2ToricX dtL2ToricX( image.domain(), predicate, l2Metric, {{true,  false}} );
  // 2D domain that is periodic along the second dimension.
  DTL2ToricY dtL2ToricY( image.domain(), predicate, l2Metric, {{false, true}} );
 
  //We compute the maximum DT value on the L2 map
  const DTL2::Value       maxv2       = * (boost::first_max_element(dtL2.constRange().begin(), dtL2.constRange().end()));
  const DTL2Toric::Value  maxvtoric   = * (boost::first_max_element(dtL2Toric.constRange().begin(), dtL2Toric.constRange().end()));
  const DTL2ToricX::Value maxvtoricX  = * (boost::first_max_element(dtL2ToricX.constRange().begin(), dtL2ToricX.constRange().end()));
  const DTL2ToricY::Value maxvtoricY  = * (boost::first_max_element(dtL2ToricY.constRange().begin(), dtL2ToricY.constRange().end()));
 
  // Color map based on the maximal value for all maps (in order to compare results with similar colors).
  const auto maxvall = std::max( { maxv2, maxvtoric, maxvtoricX, maxvtoricY } );
 
  //Colormap used for the SVG output
  typedef HueShadeColorMap<DTL2::Value, 1> HueTwice;
 
  trace.warning() << "DT maxValue= " << maxv2 << endl;
  board.clear();
  Display2DFactory::drawImage<HueTwice>(board, dtL2, 0.0, maxvall + 1);
  board.saveSVG ( "toric-example-DT-L2.svg" );
 
  trace.warning() <<  "Full toric maxValue= " << maxvtoric << endl;
  board.clear();
  Display2DFactory::drawImage<HueTwice>(board, dtL2Toric, 0.0, maxvall + 1);
  board.saveSVG ( "toric-example-DT-L2-toric.svg" );
 
  trace.warning() <<  "1th dimension periodic maxValue= " << maxvtoricX << endl;
  board.clear();
  Display2DFactory::drawImage<HueTwice>(board, dtL2ToricX, 0.0, maxvall + 1);
  board.saveSVG ( "toric-example-DT-L2-toricX.svg" );
 
  trace.warning() <<  "2nd dimension periodic maxValue= " << maxvtoricY << endl;
  board.clear();
  Display2DFactory::drawImage<HueTwice>(board, dtL2ToricY, 0.0, maxvall + 1);
  board.saveSVG ( "toric-example-DT-L2-toricY.svg" );
 
  //Explicit export with ticked colormap
  //We compute the maximum DT value on the L2 map
  TickedColorMap<double, GradientColorMap<double> > ticked(0.0,maxv2, Color::White);
  ticked.addRegularTicks(3, 0.5);
  ticked.finalize();
  ticked.colormap()->addColor( Color::Red );
  ticked.colormap()->addColor( Color::Black );
  board.clear();
  for ( auto it = dtL2.domain().begin(), itend = dtL2.domain().end();it != itend; ++it)
  {
    board<< CustomStyle((*it).className(),new CustomColors(ticked(dtL2(*it)),ticked(dtL2(*it))));
    board << *it;
  }
  board.saveSVG("toric-example-DT-L2-ticked.svg");
 
  board.clear();
  for ( auto it = dtL2Toric.domain().begin(), itend = dtL2Toric.domain().end();it != itend; ++it)
  {
    board<< CustomStyle((*it).className(),new CustomColors(ticked(dtL2Toric(*it)),ticked(dtL2Toric(*it))));
    board << *it;
  }
  board.saveSVG("toric-example-DT-L2-ticked-toric.svg");
 
  board.clear();
  for ( auto it = dtL2ToricX.domain().begin(), itend = dtL2ToricX.domain().end();it != itend; ++it)
  {
    board<< CustomStyle((*it).className(),new CustomColors(ticked(dtL2ToricX(*it)),ticked(dtL2ToricX(*it))));
    board << *it;
  }
  board.saveSVG("toric-example-DT-L2-ticked-toricX.svg");
 
  board.clear();
  for ( auto it = dtL2ToricY.domain().begin(), itend = dtL2ToricY.domain().end();it != itend; ++it)
  {
    board<< CustomStyle((*it).className(),new CustomColors(ticked(dtL2ToricY(*it)),ticked(dtL2ToricY(*it))));
    board << *it;
  }
  board.saveSVG("toric-example-DT-L2-ticked-toricY.svg");
 
  //Voronoi vector output
  board.clear();
  board << dtL2.domain();
  for ( auto it = dtL2.domain().begin(), itend = dtL2.domain().end();it != itend; ++it)
    if ( dtL2.getVoronoiSite(*it) != *it )
      Display2DFactory::draw(board,dtL2.getVoronoiSite(*it) - (*it), (*it));
  board.saveSVG("toric-example-Voro-L2.svg");
 
  board.clear();
  board << dtL2Toric.domain();
  for ( auto it = dtL2Toric.domain().begin(), itend = dtL2Toric.domain().end();it != itend; ++it)
    if ( dtL2Toric.getVoronoiSite(*it) != *it )
      Display2DFactory::draw(board, dtL2Toric.getVoronoiSite(*it) - (*it), (*it));
  board.saveSVG("toric-example-Voro-L2-toric.svg");
 
  board.clear();
  board << dtL2Toric.domain();
  for ( auto it = dtL2Toric.domain().begin(), itend = dtL2Toric.domain().end();it != itend; ++it)
    if ( dtL2Toric.getVoronoiSite(*it) != *it )
      Display2DFactory::draw(board, dtL2Toric.projectPoint(dtL2Toric.getVoronoiSite(*it)) - (*it), (*it));
  board.saveSVG("toric-example-Voro-L2-toric-projected.svg");
 
  board.clear();
  board << dtL2ToricX.domain();
  for ( auto it = dtL2ToricX.domain().begin(), itend = dtL2ToricX.domain().end();it != itend; ++it)
    if ( dtL2ToricX.getVoronoiSite(*it) != *it )
      Display2DFactory::draw(board, dtL2ToricX.getVoronoiSite(*it) - (*it), (*it));
  board.saveSVG("toric-example-Voro-L2-toricX.svg");
 
  board.clear();
  board << dtL2ToricY.domain();
  for ( auto it = dtL2ToricY.domain().begin(), itend = dtL2ToricY.domain().end();it != itend; ++it)
    if ( dtL2ToricY.getVoronoiSite(*it) != *it )
      Display2DFactory::draw(board, dtL2ToricY.getVoronoiSite(*it) - (*it), (*it));
  board.saveSVG("toric-example-Voro-L2-toricY.svg");
 
  trace.endBlock();
  return 0;
}

References DGtal::Trace::beginBlock(), image(), LibBoard::Board::saveSVG(), LibBoard::Board::setUnit(), DGtal::trace, and LibBoard::Board::UCentimeter.