addGate addTrans boolGating CloneGatingSet combineGatingSet computeGates flowWorkspace_addGate flowWorkspace_addTrans flowWorkspace_boolGating flowWorkspace_CloneGatingSet flowWorkspace_combineGatingSet flowWorkspace_computeGates flowWorkspace_gating flowWorkspace_getChildren flowWorkspace_getCompensation flowWorkspace_getGate flowWorkspace_getGateFlag flowWorkspace_getHiddenFlag flowWorkspace_getIndices flowWorkspace_getLogLevel flowWorkspace_getNegateFlag flowWorkspace_getNodeID flowWorkspace_getNodes flowWorkspace_getParent flowWorkspace_getPopCounts flowWorkspace_getPopStats flowWorkspace_getSamples flowWorkspace_getSingleCellExpression flowWorkspace_getSingleCellExpressionByGate flowWorkspace_getSplineCoefs flowWorkspace_getTransformations flowWorkspace_loadGatingSet flowWorkspace_NewGatingSet flowWorkspace_NewGatingSet_rootOnly flowWorkspace_parseWorkspace flowWorkspace_plotGh flowWorkspace_removeNode flowWorkspace_saveGatingSet flowWorkspace_setGate flowWorkspace_setIndices flowWorkspace_setLogLevel flowWorkspace_setNodeFlag flowWorkspace_setNodeName flowWorkspace_setSample flowWorkspace_toggleErrorFlag flowWorkspace_updateChannels gating getChildren getCompensation getGate getGateFlag getHiddenFlag getIndices getLogLevel getNegateFlag getNodeID getNodes getParent getPopCounts getPopStats getSamples getSingleCellExpression getSingleCellExpressionByGate getSplineCoefs getTransformations loadGatingSet NewGatingSet NewGatingSet_rootOnly parseWorkspace plotGh removeNode saveGatingSet setGate setIndices setLogLevel setNodeFlag setNodeName setSample toggleErrorFlag updateChannels

NumericMatrix getSingleCellExpression ( XPtr< GatingSet >  gs, string  sampleName, vector< string >  pops, NumericMatrix  data, CharacterVector  markers, bool  threshold  )