{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "
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Title
Image Element
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Dependencies
Matplotlib
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Backends
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Matplotlib
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Bokeh
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Plotly
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" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "import numpy as np\n", "import holoviews as hv\n", "hv.extension('matplotlib')" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Image represents a regularly sampled 2D grid of an underlying [continuous space](Continuous_Coordinates.ipynb) of intensity values, which will be colormapped on plotting. The grid of intensity values may be specified as a ``NxM`` sized array of values along with a bounds, but it may also be defined through explicit and regularly spaced x/y-coordinate arrays of shape ``M`` and ``N`` respectively. The two most basic supported constructors of an Image therefore include:\n", "\n", " Image((X, Y, Z))\n", "\n", "where ``X`` is a 1D array of shape ``M``, ``Y`` is a 1D array of shape ``N`` and ``Z`` is a 2D array of shape ``NxM``, or equivalently:\n", "\n", " Image(Z, bounds=(x0, y0, x1, y1))\n", "\n", "where ``Z`` is a 2D array of shape ``NxM`` defining the intensity values and the bounds define the (left, bottom, right, top) edges of four corners of the grid. Other gridded formats which support declaring of explicit x/y-coordinate arrays such as xarray are also supported. See the [Gridded Datasets](../../../user_guide/09-Gridded_Datasets.ipynb) user guide for all the other accepted data formats." ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "ls = np.linspace(0, 10, 200)\n", "xx, yy = np.meshgrid(ls, ls)\n", "\n", "bounds=(-1,-1,1,1) # Coordinate system: (left, bottom, right, top)\n", "img = hv.Image(np.sin(xx)*np.cos(yy), bounds=bounds)\n", "img" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Slicing, sampling, etc. on an ``Image`` all operate in this continuous space, whereas the corresponding operations on a ``Raster`` work on the raw array coordinates." ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "img + img[-0.5:0.5, -0.5:0.5]" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Notice how, because our declared coordinate system is continuous, we can slice with any floating-point value we choose. The appropriate range of the samples in the input numpy array will always be displayed, whether or not there are samples at those specific floating-point values. This also allows us to index by a floating value, since the ``Image`` is defined as a continuous space it will snap to the closest coordinate, to inspect the closest coordinate we can use the ``closest`` method:" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "closest = img.closest((0.1,0.1))\n", "points = hv.Points([closest])\n", "\n", "print('The value at position %s is %s' % (closest, img[0.1, 0.1]))\n", "\n", "img * points.opts(color='black', marker='x', s=60)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "We can also easily take cross-sections of the Image by using the sample method or collapse a dimension using the ``reduce`` method:" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "img.sample(x=0) + img.reduce(x=np.mean)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "The constructor of ``Image`` attempts to validate the input data by ensuring it is regularly sampled. In some cases, your data may be not be regularly sampled to a sufficiently high precision in which case you qill see an exception recommending the use of [``QuadMesh``](./QuadMesh.ipynb) instead. If you see this message and are sure that the ``Image`` element is appropriate, you can set the ``rtol`` value in the constructor to allow a higher deviation in sample spacing than the default of ``10e-6``. Alternatively, you can set this globally using ``hv.config.image_rtol`` as described in the [Installing and Configuring](../../../user_guide/Installing_and_Configuring.ipynb) user guide.\n", "\n", "\n", "One additional way to create Image objects is via the separate [ImaGen](https://github.com/pyviz-topics/imagen) library, which creates parameterized streams of images for experiments, simulations, or machine-learning applications.\n", "\n", "For full documentation and the available style and plot options, use ``hv.help(hv.Image).``" ] } ], "metadata": { "language_info": { "name": "python", "pygments_lexer": "ipython3" } }, "nbformat": 4, "nbformat_minor": 2 }